spark-instrumented-optimizer/python/pyspark/mllib/stat/distribution.py

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[SPARK-5012][MLLib][PySpark]Python API for Gaussian Mixture Model Python API for the Gaussian Mixture Model clustering algorithm in MLLib. Author: FlytxtRnD <meethu.mathew@flytxt.com> Closes #4059 from FlytxtRnD/PythonGmmWrapper and squashes the following commits: c973ab3 [FlytxtRnD] Merge branch 'PythonGmmWrapper', remote-tracking branch 'upstream/master' into PythonGmmWrapper 339b09c [FlytxtRnD] Added MultivariateGaussian namedtuple and Arraybuffer in trainGaussianMixture fa0a142 [FlytxtRnD] New line added d5b36ab [FlytxtRnD] Changed argument names to lowercase ac134f1 [FlytxtRnD] Merge branch 'PythonGmmWrapper' of https://github.com/FlytxtRnD/spark into PythonGmmWrapper 6671ea1 [FlytxtRnD] Added mllib/stat/distribution.py 3aee84b [FlytxtRnD] Fixed style issues 2e9f12a [FlytxtRnD] Added mllib/stat/distribution.py and fixed style issues b22532c [FlytxtRnD] Merge branch 'PythonGmmWrapper', remote-tracking branch 'upstream/master' into PythonGmmWrapper 2e14d82 [FlytxtRnD] Incorporate MultivariateGaussian instances in GaussianMixtureModel 05767c7 [FlytxtRnD] Merge branch 'PythonGmmWrapper', remote-tracking branch 'upstream/master' into PythonGmmWrapper 3464d19 [FlytxtRnD] Merge branch 'PythonGmmWrapper', remote-tracking branch 'upstream/master' into PythonGmmWrapper c1d4c71 [FlytxtRnD] Merge branch 'PythonGmmWrapper', remote-tracking branch 'origin/PythonGmmWrapper' into PythonGmmWrapper 426d130 [FlytxtRnD] Added random seed parameter 332bad1 [FlytxtRnD] Merge branch 'PythonGmmWrapper', remote-tracking branch 'upstream/master' into PythonGmmWrapper f82750b [FlytxtRnD] Fixed style issues 5c83825 [FlytxtRnD] Split input file with space delimiter fda60f3 [FlytxtRnD] Python API for Gaussian Mixture Model
2015-02-03 02:04:55 -05:00
#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
from collections import namedtuple
__all__ = ['MultivariateGaussian']
class MultivariateGaussian(namedtuple('MultivariateGaussian', ['mu', 'sigma'])):
""" Represents a (mu, sigma) tuple
>>> m = MultivariateGaussian(Vectors.dense([11,12]),DenseMatrix(2, 2, (1.0, 3.0, 5.0, 2.0)))
>>> (m.mu, m.sigma.toArray())
(DenseVector([11.0, 12.0]), array([[ 1., 5.],[ 3., 2.]]))
>>> (m[0], m[1])
(DenseVector([11.0, 12.0]), array([[ 1., 5.],[ 3., 2.]]))
"""