### What changes were proposed in this pull request?
This PR aims to upgrade `kubernetes-client` library from 4.12.0 to 4.13.2 for Apache Spark 3.2.0.
### Why are the changes needed?
This will bring [K8s 1.19.1](https://github.com/fabric8io/kubernetes-client/pull/2541) models officially and the latest bug fixes.
- https://github.com/fabric8io/kubernetes-client/releases/tag/v4.13.0
- https://github.com/fabric8io/kubernetes-client/releases/tag/v4.13.1
- https://github.com/fabric8io/kubernetes-client/releases/tag/v4.13.2
### Does this PR introduce _any_ user-facing change?
No
### How was this patch tested?
Pass the K8s IT and UT.
```
KubernetesSuite:
- Run SparkPi with no resources
- Run SparkPi with a very long application name.
- Use SparkLauncher.NO_RESOURCE
- Run SparkPi with a master URL without a scheme.
- Run SparkPi with an argument.
- Run SparkPi with custom labels, annotations, and environment variables.
- All pods have the same service account by default
- Run extraJVMOptions check on driver
- Run SparkRemoteFileTest using a remote data file
- Verify logging configuration is picked from the provided SPARK_CONF_DIR/log4j.properties
- Run SparkPi with env and mount secrets.
- Run PySpark on simple pi.py example
- Run PySpark to test a pyfiles example
- Run PySpark with memory customization
- Run in client mode.
- Start pod creation from template
- PVs with local storage
- Launcher client dependencies
- SPARK-33615: Launcher client archives
- SPARK-33748: Launcher python client respecting PYSPARK_PYTHON
- SPARK-33748: Launcher python client respecting spark.pyspark.python and spark.pyspark.driver.python
- Launcher python client dependencies using a zip file
- Test basic decommissioning
- Test basic decommissioning with shuffle cleanup
- Test decommissioning with dynamic allocation & shuffle cleanups
- Test decommissioning timeouts
- Run SparkR on simple dataframe.R example
Run completed in 19 minutes, 25 seconds.
Total number of tests run: 27
Suites: completed 2, aborted 0
Tests: succeeded 27, failed 0, canceled 0, ignored 0, pending 0
All tests passed.
```
Closes#31602 from dongjoon-hyun/SPARK-34486.
Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade Zstd-JNI library to 1.4.8-4 to bring JNI side optimization.
`ZStandardBenchmark` shows that there is no regression in terms of performance and show some improvements.
### Why are the changes needed?
https://github.com/luben/zstd-jni/commits/v1.4.8-4
- be9be47fae
- be51ebade1
- 44ff8b6f95
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the CIs.
Closes#31585 from dongjoon-hyun/SPARK-ZSTD-1.4.8-4.
Lead-authored-by: Dongjoon Hyun <dhyun@apple.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR aims to upgrade zstd-jni to 1.4.8-3.
### Why are the changes needed?
This will bring the latest improvements and bug fixes.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the CIs with the existing tests.
Closes#31430 from williamhyun/zstd-148.
Authored-by: William Hyun <williamhyun3@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR aims to upgrade Apache ORC from 1.6.6 to 1.6.7.
### Why are the changes needed?
Apache ORC 1.6.7 has the following fixes including [ORC-711 Support CryptoExtension in create/decryptLocalKey](https://issues.apache.org/jira/browse/ORC-711).
- https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12318320&version=12349470
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the CIs with the existing tests.
Closes#31301 from dongjoon-hyun/SPARK-34208.
Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
Update Avro dependency to version 1.10.1
### Why are the changes needed?
To catch up multiple improvements of Avro as well as fix security issues on transitive dependencies.
### Does this PR introduce _any_ user-facing change?
No
### How was this patch tested?
Since there were no API changes required we just run the tests
Closes#31232 from iemejia/SPARK-27733-avro-upgrade.
Authored-by: Ismaël Mejía <iemejia@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR is the 3rd try to upgrade Scala 2.12.x in order to see the feasibility.
- https://github.com/apache/spark/pull/27929 (Upgrade Scala to 2.12.11, wangyum )
- https://github.com/apache/spark/pull/30940 (Upgrade Scala to 2.12.12, viirya )
`silencer` library is updated accordingly. And, Kafka version upgrade is required because it fails like the following.
```
[info] KafkaDataConsumerSuite:
[info] org.apache.spark.streaming.kafka010.KafkaDataConsumerSuite *** ABORTED *** (1 second, 580 milliseconds)
[info] java.lang.NoClassDefFoundError: scala/math/Ordering$$anon$7
[info] at kafka.api.ApiVersion$.orderingByVersion(ApiVersion.scala:45)
```
### Why are the changes needed?
Apache Spark was stuck to 2.12.10 due to the regression in Scala 2.12.11 and 2.12.12. This will bring all the bug fixes.
- https://github.com/scala/scala/releases/tag/v2.12.13
- https://github.com/scala/scala/releases/tag/v2.12.12
- https://github.com/scala/scala/releases/tag/v2.12.11
### Does this PR introduce _any_ user-facing change?
Yes, but this is a bug-fixed version.
### How was this patch tested?
Pass the CIs.
Closes#31223 from dongjoon-hyun/SPARK-31168.
Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
Hive 2.3.8 changes:
HIVE-19662: Upgrade Avro to 1.8.2
HIVE-24324: Remove deprecated API usage from Avro
HIVE-23980: Shade Guava from hive-exec in Hive 2.3
HIVE-24436: Fix Avro NULL_DEFAULT_VALUE compatibility issue
HIVE-24512: Exclude calcite in packaging.
HIVE-22708: Fix for HttpTransport to replace String.equals
HIVE-24551: Hive should include transitive dependencies from calcite after shading it
HIVE-24553: Exclude calcite from test-jar dependency of hive-exec
### Why are the changes needed?
Upgrade Avro and Parquet to latest version.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Existing test add test try to upgrade Parquet to 1.11.1 and Avro to 1.10.1: https://github.com/apache/spark/pull/30517Closes#30657 from wangyum/SPARK-33696.
Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR upgrade Zookeeper to 3.6.2.
### Why are the changes needed?
To make Spark running on jdk 14, otherwise:
```
21/01/13 20:25:32,533 WARN [Driver-SendThread(apache-spark-zk-3.vip.hadoop.com:2181)] zookeeper.ClientCnxn:1164 : Session 0x0 for server apache-spark-zk-3.vip.hadoop.com/<unresolved>:2181, unexpected error, closing socket connection and attempting reconnect
java.lang.IllegalArgumentException: Unable to canonicalize address apache-spark-zk-3.vip.hadoop.com/<unresolved>:2181 because it's not resolvable
at org.apache.zookeeper.SaslServerPrincipal.getServerPrincipal(SaslServerPrincipal.java:65)
at org.apache.zookeeper.SaslServerPrincipal.getServerPrincipal(SaslServerPrincipal.java:41)
at org.apache.zookeeper.ClientCnxn$SendThread.startConnect(ClientCnxn.java:1001)
at org.apache.zookeeper.ClientCnxn$SendThread.run(ClientCnxn.java:1060)
```
Please see [ZOOKEEPER-3779](https://issues.apache.org/jira/browse/ZOOKEEPER-3779) for more details.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Manual test:
1. Replace zookeeper-3.4.14.jar with zookeeper-3.6.2.jar and zookeeper-jute-3.6.2.jar
2. Run Spark on jdk 14. Hadoop 2.7 with HADOOP-12760, Hive 1.2.1 and Zookeeper server version is 3.4.6.
Some key configurations:
```
# spark-defaults.conf
spark.yarn.appMasterEnv.JAVA_HOME /apache/releases/jdk-14.0.2
spark.executorEnv.JAVA_HOME /apache/releases/jdk-14.0.2
# spark-env.sh
export JAVA_HOME=/apache/releases/jdk-14.0.2
```
Jenkins Tests
- Hadoop 3.2: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/134048/testReport
- Hadoop 2.7: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/134063/testReportCloses#31177 from wangyum/SPARK-34110.
Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This:
1. switches Spark to use shaded Hadoop clients, namely hadoop-client-api and hadoop-client-runtime, for Hadoop 3.x.
2. upgrade built-in version for Hadoop 3.x to Hadoop 3.2.2
Note that for Hadoop 2.7, we'll still use the same modules such as hadoop-client.
In order to still keep default Hadoop profile to be hadoop-3.2, this defines the following Maven properties:
```
hadoop-client-api.artifact
hadoop-client-runtime.artifact
hadoop-client-minicluster.artifact
```
which default to:
```
hadoop-client-api
hadoop-client-runtime
hadoop-client-minicluster
```
but all switch to `hadoop-client` when the Hadoop profile is hadoop-2.7. A side affect from this is we'll import the same dependency multiple times. For this I have to disable Maven enforcer `banDuplicatePomDependencyVersions`.
Besides above, there are the following changes:
- explicitly add a few dependencies which are imported via transitive dependencies from Hadoop jars, but are removed from the shaded client jars.
- removed the use of `ProxyUriUtils.getPath` from `ApplicationMaster` which is a server-side/private API.
- modified `IsolatedClientLoader` to exclude `hadoop-auth` jars when Hadoop version is 3.x. This change should only matter when we're not sharing Hadoop classes with Spark (which is _mostly_ used in tests).
### Why are the changes needed?
Hadoop 3.2.2 is released with new features and bug fixes, so it's good for the Spark community to adopt it. However, latest Hadoop versions starting from Hadoop 3.2.1 have upgraded to use Guava 27+. In order to resolve Guava conflicts, this takes the approach by switching to shaded client jars provided by Hadoop. This also has the benefits of avoid pulling other 3rd party dependencies from Hadoop side so as to avoid more potential future conflicts.
### Does this PR introduce _any_ user-facing change?
When people use Spark with `hadoop-provided` option, they should make sure class path contains `hadoop-client-api` and `hadoop-client-runtime` jars. In addition, they may need to make sure these jars appear before other Hadoop jars in the order. Otherwise, classes may be loaded from the other non-shaded Hadoop jars and cause potential conflicts.
### How was this patch tested?
Relying on existing tests.
Closes#30701 from sunchao/test-hadoop-3.2.2.
Authored-by: Chao Sun <sunchao@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR upgrade Py4J from 0.10.9 to 0.10.9.1 that contains some bug fixes and improvements.
It contains one bug fix (4152353ac1).
### Why are the changes needed?
To leverage fixes from the upstream in Py4J.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Jenkins build and GitHub Actions will test it out.
Closes#31009 from HyukjinKwon/SPARK-33984.
Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR aims to update commons-lang3 to 3.11 to support Java 16+ better.
### Why are the changes needed?
commons-lang3 has the following bug fixes and Java 16 support.
- https://commons.apache.org/proper/commons-lang/changes-report.html#a3.11
### Does this PR introduce _any_ user-facing change?
N/A
### How was this patch tested?
Pass the CIs.
Closes#30990 from williamhyun/Commons-lang3.
Authored-by: William Hyun <williamhyun3@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR aims to upgrade Zstd library to 1.4.8.
### Why are the changes needed?
This will bring Zstd 1.4.7 and 1.4.8 improvement and bug fixes and the following from `zstd-jni`.
- https://github.com/facebook/zstd/releases/tag/v1.4.7
- https://github.com/facebook/zstd/releases/tag/v1.4.8
- https://github.com/luben/zstd-jni/issues/153 (Apple M1 architecture)
### Does this PR introduce _any_ user-facing change?
This will unblock Apple Silicon usage.
### How was this patch tested?
Pass the CIs.
Closes#30848 from dongjoon-hyun/SPARK-33843.
Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
TO FIX flaky tests:
https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/132345/testReport/
```
org.apache.spark.sql.hive.thriftserver.HiveThriftHttpServerSuite.JDBC query execution
org.apache.spark.sql.hive.thriftserver.HiveThriftHttpServerSuite.Checks Hive version
org.apache.spark.sql.hive.thriftserver.HiveThriftHttpServerSuite.SPARK-24829 Checks cast as float
```
The root cause here is a jar conflict issue.
`NewCookie.isHttpOnly` is not defined in the `jsr311-api.jar` which conflicts
The transitive artifact `jsr311-api.jar` of `hadoop-client` is excluded at the maven side. See https://issues.apache.org/jira/browse/SPARK-27179.
The Jenkins PR builder and Github Action use `SBT` as the compiler tool.
First, the exclusion rule from maven is not followed by sbt, so I was able to see `jsr311-api.jar` from maven cache to be added to the classpath directly. **This seems to be a bug of `sbt-pom-reader` plugin but I'm not that sure.**
Then I added an `ExcludeRule` for the `hive-thriftserver` module at the SBT side and did see the `jsr311-api.jar` gone, but the CI jobs still failed with the same error.
I added a trace log in ThriftHttpServlet
```s
ERROR ThriftHttpServlet: !!!!!!!!! Suspect???????? --->
file:/home/jenkins/workspace/SparkPullRequestBuilder/assembly/target/scala-2.12/jars/jsr311-api-1.1.1.jar
```
And the log pointed out that the assembly phase copied it to `assembly/target/scala-2.12/jars/` which will be added to the classpath too. With the help of SBT `dependencyTree` tool, I saw the `jsr311-api` again as a transitive of `jersery-core` from `yarn` module with a `test` scope. So **This seems to be another bug from the SBT side of the `sbt-assembly` plugin.** It copied a test scope transitive artifact to the assembly output.
In this PR, I defined some rules in SparkBuild.scala to bypass the potential bugs from the SBT side.
First, exclude the `jsr311` from all over the project and then add it back separately to the YARN module for SBT.
Additionally, the HiveThriftServerSuites was reflected for reducing flakiness too, but not related to the bugs I have found so far.
### Why are the changes needed?
fix test here
### Does this PR introduce _any_ user-facing change?
NO
### How was this patch tested?
passing jenkins and ga
Closes#30643 from yaooqinn/HiveThriftHttpServerSuite.
Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
### What changes were proposed in this pull request?
This pr upgrade Jackson to 2.11.4.
Jackson Release 2.11: https://github.com/FasterXML/jackson/wiki/Jackson-Release-2.11
### Why are the changes needed?
Make it easy to upgrade dependency because Jackson 2.10 is not compatible with 2.11:
```
com.fasterxml.jackson.databind.JsonMappingException: Scala module 2.10.5 requires Jackson Databind version >= 2.10.0 and < 2.11.0
```
[Avro](https://issues.apache.org/jira/browse/AVRO-2967) has upgraded Jackson to 2.11.3.
[Parquet](https://issues.apache.org/jira/browse/PARQUET-1895) has upgraded Jackson to 2.11.2.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Existing test.
Closes#30746 from wangyum/SPARK-33766.
Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
### Why are the changes needed?
Open Source scans are reporting a potential encoding/decoding issue related to versions of commons-codec prior to 1.13. Commit referenced: 48b615756d
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Existing tests.
Closes#30740 from n-marion/SPARK-33762_upgrade-commons-codec.
Authored-by: Nicholas Marion <nmarion@us.ibm.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade Apache ORC to 1.6.6 for Apache Spark 3.2.0.
### Why are the changes needed?
This brings the latest bug fixes and features.
Apache Iceberg is already using Apache ORC 1.6.6.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the CIs.
Closes#30715 from dongjoon-hyun/SPARK-33295.
Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This upgrades snappy-java to 1.1.8.2.
### Why are the changes needed?
Minor version upgrade that includes:
- [Fixed](https://github.com/xerial/snappy-java/pull/265) an initialization issue when using a recent Mac OS X version
- Support Apple Silicon (M1, Mac-aarch64)
- Fixed the pure-java Snappy fallback logic when no native library for your platform is found.
### Does this PR introduce _any_ user-facing change?
No
### How was this patch tested?
Unit test.
Closes#30690 from viirya/upgrade-snappy.
Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
Upgrade the jackson dependencies to 2.10.5 and jackson-databind to 2.10.5.1
### Why are the changes needed?
Jackson dependency has vulnerability CVE-2020-25649.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Existing unit tests.
Closes#30656 from n-marion/SPARK-33695_upgrade-jackson.
Authored-by: Nicholas Marion <nmarion@us.ibm.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This PR upgrades `commons.httpclient` from `4.5.6` to `4.5.13`.
4.5.6 is released over 2 years ago and now we can use more stable `4.5.13`.
https://archive.apache.org/dist/httpcomponents/httpclient/RELEASE_NOTES-4.5.x.txt
### Why are the changes needed?
To follow the more stable release.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Should be done by the existing tests.
Closes#30634 from sarutak/upgrade-httpclient.
Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This reverts commit SPARK-33212 (cb3fa6c936) mostly with three exceptions:
1. `SparkSubmitUtils` was updated recently by SPARK-33580
2. `resource-managers/yarn/pom.xml` was updated recently by SPARK-33104 to add `hadoop-yarn-server-resourcemanager` test dependency.
3. Adjust `com.fasterxml.jackson.module:jackson-module-jaxb-annotations` dependency in K8s module which is updated recently by SPARK-33471.
### Why are the changes needed?
According to [HADOOP-16080](https://issues.apache.org/jira/browse/HADOOP-16080) since Apache Hadoop 3.1.1, `hadoop-aws` doesn't work with `hadoop-client-api`. It fails at write operation like the following.
**1. Spark distribution with `-Phadoop-cloud`**
```scala
$ bin/spark-shell --conf spark.hadoop.fs.s3a.access.key=$AWS_ACCESS_KEY_ID --conf spark.hadoop.fs.s3a.secret.key=$AWS_SECRET_ACCESS_KEY
20/11/30 23:01:24 WARN NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
Using Spark's default log4j profile: org/apache/spark/log4j-defaults.properties
Setting default log level to "WARN".
To adjust logging level use sc.setLogLevel(newLevel). For SparkR, use setLogLevel(newLevel).
Spark context available as 'sc' (master = local[*], app id = local-1606806088715).
Spark session available as 'spark'.
Welcome to
____ __
/ __/__ ___ _____/ /__
_\ \/ _ \/ _ `/ __/ '_/
/___/ .__/\_,_/_/ /_/\_\ version 3.1.0-SNAPSHOT
/_/
Using Scala version 2.12.10 (OpenJDK 64-Bit Server VM, Java 1.8.0_272)
Type in expressions to have them evaluated.
Type :help for more information.
scala> spark.read.parquet("s3a://dongjoon/users.parquet").show
20/11/30 23:01:34 WARN MetricsConfig: Cannot locate configuration: tried hadoop-metrics2-s3a-file-system.properties,hadoop-metrics2.properties
+------+--------------+----------------+
| name|favorite_color|favorite_numbers|
+------+--------------+----------------+
|Alyssa| null| [3, 9, 15, 20]|
| Ben| red| []|
+------+--------------+----------------+
scala> Seq(1).toDF.write.parquet("s3a://dongjoon/out.parquet")
20/11/30 23:02:14 ERROR Executor: Exception in task 0.0 in stage 2.0 (TID 2)/ 1]
java.lang.NoSuchMethodError: org.apache.hadoop.util.SemaphoredDelegatingExecutor.<init>(Lcom/google/common/util/concurrent/ListeningExecutorService;IZ)V
```
**2. Spark distribution without `-Phadoop-cloud`**
```scala
$ bin/spark-shell --conf spark.hadoop.fs.s3a.access.key=$AWS_ACCESS_KEY_ID --conf spark.hadoop.fs.s3a.secret.key=$AWS_SECRET_ACCESS_KEY -c spark.eventLog.enabled=true -c spark.eventLog.dir=s3a://dongjoon/spark-events/ --packages org.apache.hadoop:hadoop-aws:3.2.0,org.apache.hadoop:hadoop-common:3.2.0
...
java.lang.NoSuchMethodError: org.apache.hadoop.util.SemaphoredDelegatingExecutor.<init>(Lcom/google/common/util/concurrent/ListeningExecutorService;IZ)V
at org.apache.hadoop.fs.s3a.S3AFileSystem.create(S3AFileSystem.java:772)
```
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the CI.
Closes#30508 from dongjoon-hyun/SPARK-33212-REVERT.
Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
### What changes were proposed in this pull request?
We supported Hive metastore are 0.12.0 through 3.1.2, but we supported hive-jdbc are 0.12.0 through 2.3.7. It will throw `TProtocolException` if we use hive-jdbc 3.x:
```
[rootspark-3267648 apache-hive-3.1.2-bin]# bin/beeline -u jdbc:hive2://localhost:10000/default
Connecting to jdbc:hive2://localhost:10000/default
Connected to: Spark SQL (version 3.1.0-SNAPSHOT)
Driver: Hive JDBC (version 3.1.2)
Transaction isolation: TRANSACTION_REPEATABLE_READ
Beeline version 3.1.2 by Apache Hive
0: jdbc:hive2://localhost:10000/default> create table t1(id int) using parquet;
Unexpected end of file when reading from HS2 server. The root cause might be too many concurrent connections. Please ask the administrator to check the number of active connections, and adjust hive.server2.thrift.max.worker.threads if applicable.
Error: org.apache.thrift.transport.TTransportException (state=08S01,code=0)
```
```
org.apache.thrift.protocol.TProtocolException: Missing version in readMessageBegin, old client?
at org.apache.thrift.protocol.TBinaryProtocol.readMessageBegin(TBinaryProtocol.java:234)
at org.apache.thrift.TBaseProcessor.process(TBaseProcessor.java:27)
at org.apache.hive.service.auth.TSetIpAddressProcessor.process(TSetIpAddressProcessor.java:53)
at org.apache.thrift.server.TThreadPoolServer$WorkerProcess.run(TThreadPoolServer.java:310)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1130)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:630)
at java.base/java.lang.Thread.run(Thread.java:832)
```
This pr upgrade hive-service-rpc to 3.1.2 to fix this issue.
### Why are the changes needed?
To support hive-jdbc 3.x.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Manual test:
```
[rootspark-3267648 apache-hive-3.1.2-bin]# bin/beeline -u jdbc:hive2://localhost:10000/default
Connecting to jdbc:hive2://localhost:10000/default
Connected to: Spark SQL (version 3.1.0-SNAPSHOT)
Driver: Hive JDBC (version 3.1.2)
Transaction isolation: TRANSACTION_REPEATABLE_READ
Beeline version 3.1.2 by Apache Hive
0: jdbc:hive2://localhost:10000/default> create table t1(id int) using parquet;
+---------+
| Result |
+---------+
+---------+
No rows selected (1.051 seconds)
0: jdbc:hive2://localhost:10000/default> insert into t1 values(1);
+---------+
| Result |
+---------+
+---------+
No rows selected (2.08 seconds)
0: jdbc:hive2://localhost:10000/default> select * from t1;
+-----+
| id |
+-----+
| 1 |
+-----+
1 row selected (0.605 seconds)
```
Closes#30478 from wangyum/SPARK-33525.
Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This PR intends to upgrade ANTLR runtime from 4.7.1 to 4.8-1.
### Why are the changes needed?
Release note of v4.8 and v4.7.2 (the v4.7.2 release has a few minor bug fixes for java targets):
- v4.8: https://github.com/antlr/antlr4/releases/tag/4.8
- v4.7.2: https://github.com/antlr/antlr4/releases/tag/4.7.2
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
GA tests.
Closes#30404 from maropu/UpgradeAntlr.
Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade Kubernetes-client from 4.11.1 to 4.12.0
### Why are the changes needed?
This upgrades the dependency for Apache Spark 3.1.0.
### Does this PR introduce any user-facing change?
No.
### How was this patch tested?
Pass the CIs.
Closes#30401 from ramesh-muthusamy/SPARK-33471-k8s-clientupgrade.
Authored-by: Rameshkrishnan Muthusamy <rameshkrishnan_muthusamy@apple.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This upgrade Apache Arrow version from 1.0.1 to 2.0.0
### Why are the changes needed?
Apache Arrow 2.0.0 was released with some improvements from Java side, so it's better to upgrade Spark to the new version.
Note that the format version in Arrow 2.0.0 is still 1.0.0 so API should still be compatible between 1.0.1 and 2.0.0.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Existing UTs.
Closes#30306 from sunchao/SPARK-33213.
Authored-by: Chao Sun <sunchao@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR aims to upgrade `commons-compress` from 1.8 to 1.20.
### Why are the changes needed?
- https://commons.apache.org/proper/commons-compress/security-reports.html
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the CIs.
Closes#30304 from dongjoon-hyun/SPARK-33405.
Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
### What changes were proposed in this pull request?
Update the package commons-crypto to v1.1.0 to support aarch64 platform
- https://issues.apache.org/jira/browse/CRYPTO-139
### Why are the changes needed?
The package commons-crypto-1.0.0 available in the Maven repository
doesn't support aarch64 platform. It costs long time in
CryptoRandomFactory.getCryptoRandom(properties).nextBytes(iv) when NettyBlockRpcSever
receive block data from client, if the time more than the default value 120s, IOException raised and client
will retry replicate the block data to other executors. But in fact the replication is complete,
it makes the replication number incorrect.
This makes DistributedSuite tests pass.
### Does this PR introduce any user-facing change?
No
### How was this patch tested?
Pass the CIs.
Closes#30275 from huangtianhua/SPARK-32691.
Authored-by: huangtianhua <huangtianhua223@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade `Kubernetes-client` from 4.10.3 to 4.11.1.
### Why are the changes needed?
This upgrades the dependency for Apache Spark 3.1.0.
Since 4.12.0 is still new and has a breaking API changes, this PR chooses the latest compatible one.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the all CIs including K8s IT.
Closes#30233 from dongjoon-hyun/SPARK-33324.
Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This switches Spark to use shaded Hadoop clients, namely hadoop-client-api and hadoop-client-runtime, for Hadoop 3.x. For Hadoop 2.7, we'll still use the same modules such as hadoop-client.
In order to still keep default Hadoop profile to be hadoop-3.2, this defines the following Maven properties:
```
hadoop-client-api.artifact
hadoop-client-runtime.artifact
hadoop-client-minicluster.artifact
```
which default to:
```
hadoop-client-api
hadoop-client-runtime
hadoop-client-minicluster
```
but all switch to `hadoop-client` when the Hadoop profile is hadoop-2.7. A side affect from this is we'll import the same dependency multiple times. For this I have to disable Maven enforcer `banDuplicatePomDependencyVersions`.
Besides above, there are the following changes:
- explicitly add a few dependencies which are imported via transitive dependencies from Hadoop jars, but are removed from the shaded client jars.
- removed the use of `ProxyUriUtils.getPath` from `ApplicationMaster` which is a server-side/private API.
- modified `IsolatedClientLoader` to exclude `hadoop-auth` jars when Hadoop version is 3.x. This change should only matter when we're not sharing Hadoop classes with Spark (which is _mostly_ used in tests).
### Why are the changes needed?
This serves two purposes:
- to unblock Spark from upgrading to Hadoop 3.2.2/3.3.0+. Latest Hadoop versions have upgraded to use Guava 27+ and in order to adopt the latest Hadoop versions in Spark, we'll need to resolve the Guava conflicts. This takes the approach by switching to shaded client jars provided by Hadoop.
- avoid pulling 3rd party dependencies from Hadoop and avoid potential future conflicts.
### Does this PR introduce _any_ user-facing change?
When people use Spark with `hadoop-provided` option, they should make sure class path contains `hadoop-client-api` and `hadoop-client-runtime` jars. In addition, they may need to make sure these jars appear before other Hadoop jars in the order. Otherwise, classes may be loaded from the other non-shaded Hadoop jars and cause potential conflicts.
### How was this patch tested?
Relying on existing tests.
Closes#29843 from sunchao/SPARK-29250.
Authored-by: Chao Sun <sunchao@apple.com>
Signed-off-by: DB Tsai <d_tsai@apple.com>
### What changes were proposed in this pull request?
This PR intends to upgrade snappy-java from 1.1.7.5 to 1.1.8.
### Why are the changes needed?
For performance improvements; the released `snappy-java` bundles the latest `Snappy` v1.1.8 binaries with small performance improvements.
- snappy-java release note: https://github.com/xerial/snappy-java/releases/tag/1.1.8
- snappy release note: https://github.com/google/snappy/releases/tag/1.1.8
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
GA tests.
Closes#30120 from maropu/Snappy1.1.8.
Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: Liang-Chi Hsieh <viirya@gmail.com>
### What changes were proposed in this pull request?
Hive's `hive-service-rpc` module started since hive-2.1.0 and it contains only the thrift IDL file and the code generated by it.
Removing the inlined code will help maintain and upgrade builtin hive versions
### Why are the changes needed?
to simply the code.
### Does this PR introduce _any_ user-facing change?
no
### How was this patch tested?
passing CI
Closes#30055 from yaooqinn/SPARK-33159.
Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade ZStandard library for Apache Spark 3.1.0.
### Why are the changes needed?
This will bring the latest bug fixes.
- 2662fbdc32
- bbe140b758
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the CI.
Closes#30010 from dongjoon-hyun/SPARK-33117.
Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR removes the leftover of Hive 1.2 workarounds and Hive 1.2 profile in Jenkins script.
- `test-hive1.2` title is not used anymore in Jenkins
- Remove some comments related to Hive 1.2
- Remove unused codes in `OrcFilters.scala` Hive
- Test `spark.sql.hive.convertMetastoreOrc` disabled case for the tests added at SPARK-19809 and SPARK-22267
### Why are the changes needed?
To remove unused codes & improve test coverage
### Does this PR introduce _any_ user-facing change?
No, dev-only.
### How was this patch tested?
Manually ran the unit tests. Also It will be tested in CI in this PR.
Closes#29973 from HyukjinKwon/SPARK-33082-SPARK-20202.
Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR aims to upgrade Apache ORC to 1.5.12.
### Why are the changes needed?
This brings us the latest bug patches like the followings.
- ORC-644 nested struct evolution does not respect to orc.force.positional.evolution
- ORC-667 Positional mapping for nested struct types should not applied by default
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the CI.
Closes#29930 from dongjoon-hyun/SPARK-ORC-1.5.12.
Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR aims to upgrade Apache Hive `hive-storage-api` library from 2.7.1 to 2.7.2.
### Why are the changes needed?
[storage-api 2.7.2](https://github.com/apache/hive/commits/rel/storage-release-2.7.2/storage-api) has the following extension and can be used when users uses a provided orc dependency.
[HIVE-22959](dade9919d9 (diff-ccfc9dd7584117f531322cda3a29f3c3)) : Extend storage-api to expose FilterContext
[HIVE-23215](361925d2f3 (diff-ccfc9dd7584117f531322cda3a29f3c3)) : Make FilterContext and MutableFilterContext interfaces
### Does this PR introduce _any_ user-facing change?
Yes. This is a dependency change.
### How was this patch tested?
Pass the existing tests.
Closes#29923 from dongjoon-hyun/SPARK-33047.
Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
This PR aims to upgrade `kubernetes-client` library to track fabric8's declared compatibility for k8s 1.18.0:
https://github.com/fabric8io/kubernetes-client#compatibility-matrix
### Why are the changes needed?
According to fabric8, 4.9.2 is incompatible with k8s 1.18.0.
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Not tested yet.
Closes#29888 from laflechejonathan/jlf/fabric8Ugprade.
Authored-by: jlafleche <jlafleche@palantir.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
### What changes were proposed in this pull request?
Upgrade Apache Arrow to version 1.0.1 for the Java dependency and increase minimum version of PyArrow to 1.0.0.
This release marks a transition to binary stability of the columnar format (which was already informally backward-compatible going back to December 2017) and a transition to Semantic Versioning for the Arrow software libraries. Also note that the Java arrow-memory artifact has been split to separate dependence on netty-buffer and allow users to select an allocator. Spark will continue to use `arrow-memory-netty` to maintain performance benefits.
Version 1.0.0 - 1.0.0 include the following selected fixes/improvements relevant to Spark users:
ARROW-9300 - [Java] Separate Netty Memory to its own module
ARROW-9272 - [C++][Python] Reduce complexity in python to arrow conversion
ARROW-9016 - [Java] Remove direct references to Netty/Unsafe Allocators
ARROW-8664 - [Java] Add skip null check to all Vector types
ARROW-8485 - [Integration][Java] Implement extension types integration
ARROW-8434 - [C++] Ipc RecordBatchFileReader deserializes the Schema multiple times
ARROW-8314 - [Python] Provide a method to select a subset of columns of a Table
ARROW-8230 - [Java] Move Netty memory manager into a separate module
ARROW-8229 - [Java] Move ArrowBuf into the Arrow package
ARROW-7955 - [Java] Support large buffer for file/stream IPC
ARROW-7831 - [Java] unnecessary buffer allocation when calling splitAndTransferTo on variable width vectors
ARROW-6111 - [Java] Support LargeVarChar and LargeBinary types and add integration test with C++
ARROW-6110 - [Java] Support LargeList Type and add integration test with C++
ARROW-5760 - [C++] Optimize Take implementation
ARROW-300 - [Format] Add body buffer compression option to IPC message protocol using LZ4 or ZSTD
ARROW-9098 - RecordBatch::ToStructArray cannot handle record batches with 0 column
ARROW-9066 - [Python] Raise correct error in isnull()
ARROW-9223 - [Python] Fix to_pandas() export for timestamps within structs
ARROW-9195 - [Java] Wrong usage of Unsafe.get from bytearray in ByteFunctionsHelper class
ARROW-7610 - [Java] Finish support for 64 bit int allocations
ARROW-8115 - [Python] Conversion when mixing NaT and datetime objects not working
ARROW-8392 - [Java] Fix overflow related corner cases for vector value comparison
ARROW-8537 - [C++] Performance regression from ARROW-8523
ARROW-8803 - [Java] Row count should be set before loading buffers in VectorLoader
ARROW-8911 - [C++] Slicing a ChunkedArray with zero chunks segfaults
View release notes here:
https://arrow.apache.org/release/1.0.1.htmlhttps://arrow.apache.org/release/1.0.0.html
### Why are the changes needed?
Upgrade brings fixes, improvements and stability guarantees.
### Does this PR introduce _any_ user-facing change?
No
### How was this patch tested?
Existing tests with pyarrow 1.0.0 and 1.0.1
Closes#29686 from BryanCutler/arrow-upgrade-100-SPARK-32312.
Authored-by: Bryan Cutler <cutlerb@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
### What changes were proposed in this pull request?
Spark's CSV source can optionally ignore lines starting with a comment char. Some code paths check to see if it's set before applying comment logic (i.e. not set to default of `\0`), but many do not, including the one that passes the option to Univocity. This means that rows beginning with a null char were being treated as comments even when 'disabled'.
### Why are the changes needed?
To avoid dropping rows that start with a null char when this is not requested or intended. See JIRA for an example.
### Does this PR introduce _any_ user-facing change?
Nothing beyond the effect of the bug fix.
### How was this patch tested?
Existing tests plus new test case.
Closes#29516 from srowen/SPARK-32614.
Authored-by: Sean Owen <srowen@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
### What changes were proposed in this pull request?
This PR reverts https://github.com/apache/spark/pull/27860 to downgrade Janino, as the new version has a bug.
### Why are the changes needed?
The symptom is about NaN comparison. For code below
```
if (double_value <= 0.0) {
...
} else {
...
}
```
If `double_value` is NaN, `NaN <= 0.0` is false and we should go to the else branch. However, current Spark goes to the if branch and causes correctness issues like SPARK-32640.
One way to fix it is:
```
boolean cond = double_value <= 0.0;
if (cond) {
...
} else {
...
}
```
I'm not familiar with Janino so I don't know what's going on there.
### Does this PR introduce _any_ user-facing change?
Yes, fix correctness bugs.
### How was this patch tested?
a new test
Closes#29495 from cloud-fan/revert.
Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade `json4s` to from 3.6.6 to 3.7.0-M5 for Scala 2.13 support at Apache Spark 3.1.0 on December. We will upgrade to the latest `json4s` around November.
### Why are the changes needed?
`json4s` starts to support Scala 2.13 since v3.7.0-M4.
- https://github.com/json4s/json4s/issues/660
- b013af8e75
Old `json4s` causes many UT failures with `NoSuchMethodException`.
```scala
Cause: java.lang.NoSuchMethodException: scala.collection.immutable.Seq$.apply(scala.collection.Seq)
at java.lang.Class.getMethod(Class.java:1786)
```
The following is one example.
```scala
$ dev/change-scala-version.sh 2.13
$ build/mvn test -pl core --am -Pscala-2.13 -Dtest=none -DwildcardSuites=org.apache.spark.executor.CoarseGrainedExecutorBackendSuite
...
Tests: succeeded 4, failed 9, canceled 0, ignored 0, pending 0
*** 9 TESTS FAILED ***
```
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
1. **Scala 2.12**: Pass the Jenkins or GitHub Action with the existing tests.
2. **Scala 2.13**: Do the following manually at least.
```scala
$ dev/change-scala-version.sh 2.13
$ build/mvn test -pl core --am -Pscala-2.13 -Dtest=none -DwildcardSuites=org.apache.spark.executor.CoarseGrainedExecutorBackendSuite
...
Tests: succeeded 13, failed 0, canceled 0, ignored 0, pending 0
All tests passed.
```
Closes#29239 from dongjoon-hyun/SPARK-32441.
Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
Updates to scalatest 3.2.0. Though it looks large, it is 99% changes to the new location of scalatest classes.
### Why are the changes needed?
3.2.0+ has a fix that is required for Scala 2.13.3+ compatibility.
### Does this PR introduce _any_ user-facing change?
No, only affects tests.
### How was this patch tested?
Existing tests.
Closes#29196 from srowen/SPARK-32398.
Authored-by: Sean Owen <srowen@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade to ZStd 1.4.5-4.
### Why are the changes needed?
ZStd 1.4.5-4 fixes the following.
- 3d16e51525
- 3d51bdcb82
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the Jenkins.
Closes#28969 from williamhyun/zstd2.
Authored-by: William Hyun <williamhyun3@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade to Apache Commons Lang 3.10.
### Why are the changes needed?
This will bring the latest bug fixes like [LANG-1453](https://issues.apache.org/jira/browse/LANG-1453).
https://commons.apache.org/proper/commons-lang/release-notes/RELEASE-NOTES-3.10.txt
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Pass the Jenkins.
Closes#28889 from williamhyun/commons-lang-3.10.
Authored-by: William Hyun <williamhyun3@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
### What changes were proposed in this pull request?
This PR aims to upgrade to Zstd 1.4.5.
### Why are the changes needed?
Zstd 1.4.5 improves performance.
https://github.com/facebook/zstd/releases/tag/v1.4.5
### Does this PR introduce _any_ user-facing change?
No.
### How was this patch tested?
Passed the Jenkins.
Closes#28682 from williamhyun/zstd.
Authored-by: William Hyun <williamhyun3@gmail.com>
Signed-off-by: DB Tsai <d_tsai@apple.com>
