Tathagata Das
fb9956256d
Merge branch 'mesos-master' into streaming
...
Conflicts:
core/src/main/scala/spark/rdd/CheckpointRDD.scala
streaming/src/main/scala/spark/streaming/dstream/ReducedWindowedDStream.scala
2013-02-20 09:01:29 -08:00
Matei Zaharia
06e5e6627f
Renamed "splits" to "partitions"
2013-02-17 22:13:26 -08:00
Matei Zaharia
340cc54e47
Merge pull request #471 from stephenh/parallelrdd
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Move ParallelCollection into spark.rdd package.
2013-02-16 16:39:15 -08:00
Matei Zaharia
3260b6120e
Merge pull request #470 from stephenh/morek
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Make CoGroupedRDDs explicitly have the same key type.
2013-02-16 16:38:38 -08:00
Stephen Haberman
924f47dd11
Add RDD.subtract.
...
Instead of reusing the cogroup primitive, this adds a SubtractedRDD
that knows it only needs to keep rdd1's values (per split) in memory.
2013-02-16 13:38:42 -06:00
Stephen Haberman
e7713adb99
Move ParallelCollection into spark.rdd package.
2013-02-16 13:20:48 -06:00
Stephen Haberman
ae2234687d
Make CoGroupedRDDs explicitly have the same key type.
2013-02-16 13:10:31 -06:00
Stephen Haberman
4328873294
Add assertion about dependencies.
2013-02-16 01:16:40 -06:00
Stephen Haberman
c34b8ad2c5
Avoid a shuffle if combineByKey is passed the same partitioner.
2013-02-16 00:54:03 -06:00
Stephen Haberman
6a2d957843
Tweak test names.
2013-02-16 00:33:49 -06:00
Imran Rashid
bffee929ab
Merge branch 'master' into stageInfo
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Conflicts:
core/src/main/scala/spark/rdd/CoGroupedRDD.scala
core/src/main/scala/spark/storage/BlockManager.scala
2013-02-15 10:35:04 -08:00
Patrick Wendell
f0b68c623c
Initial cut at replacing K, V in Java files
2013-02-11 10:03:37 -08:00
Tathagata Das
16baea62bc
Fixed bug in CheckpointRDD to prevent exception when the original RDD had zero splits.
2013-02-10 19:14:49 -08:00
Imran Rashid
b7d9e24394
use TaskMetrics to gather all stats; lots of plumbing to get it all the way back to driver
2013-02-10 14:18:52 -08:00
Stephen Haberman
680f42e6cd
Change defaultPartitioner to use upstream split size.
...
Previously it used the SparkContext.defaultParallelism, which occassionally
ended up being a very bad guess. Looking at upstream RDDs seems to make
better use of the context.
Also sorted the upstream RDDs by partition size first, as if we have
a hugely-partitioned RDD and tiny-partitioned RDD, it is unlikely
we want the resulting RDD to be tiny-partitioned.
2013-02-10 02:27:03 -06:00
Stephen Haberman
921be76533
Use stubs instead of mocks for DAGSchedulerSuite.
2013-02-09 16:42:18 -06:00
Imran Rashid
04e828f7c1
general fixes to Distribution, plus some tests
2013-02-08 19:07:36 -08:00
Stephen Haberman
f2bc748013
Add RDD.coalesce.
2013-02-05 21:23:36 -06:00
Imran Rashid
379564c7e0
setup plumbing to get task metrics; lots of unfinished parts, but basic flow in place
2013-02-05 18:30:21 -08:00
Matei Zaharia
a4611d66f0
Merge pull request #449 from stephenh/longerdriversuite
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Increase DriverSuite timeout.
2013-02-05 17:58:22 -08:00
Stephen Haberman
1ba3393ceb
Increase DriverSuite timeout.
2013-02-05 17:56:50 -06:00
Imran Rashid
295b534398
task context keeps a handle on Task -- giant hack, temporary for tracking shuffle times & amount
2013-02-05 10:18:16 -08:00
Matei Zaharia
f6ec547ea7
Small fix to test for distinct
2013-02-04 13:14:54 -08:00
Matei Zaharia
aa4ee1e9e5
Fix failing test
2013-02-04 11:06:31 -08:00
Charles Reiss
6107957962
Merge remote-tracking branch 'base/master' into dag-sched-tests
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Conflicts:
core/src/main/scala/spark/scheduler/DAGScheduler.scala
2013-02-02 00:33:30 -08:00
Charles Reiss
1fd5ee323d
Code review changes: add sc.stop; style of multiline comments; parens on procedure calls.
2013-02-01 22:33:38 -08:00
Matei Zaharia
ae26911ec0
Add back test for distinct without parens
2013-02-01 21:07:24 -08:00
Matei Zaharia
8b3041c723
Reduced the memory usage of reduce and similar operations
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These operations used to wait for all the results to be available in an
array on the driver program before merging them. They now merge values
incrementally as they arrive.
2013-02-01 15:38:42 -08:00
Charles Reiss
7f51458774
Comment at top of DAGSchedulerSuite
2013-01-30 09:34:53 -08:00
Charles Reiss
9c0bae75ad
Change DAGSchedulerSuite to run DAGScheduler in the same Thread.
2013-01-30 09:22:07 -08:00
Charles Reiss
4bf3d7ea12
Clear spark.master.port to cleanup for other tests
2013-01-29 19:05:58 -08:00
Charles Reiss
9eac7d01f0
Add DAGScheduler tests.
2013-01-29 18:55:43 -08:00
Matei Zaharia
9ae11603b4
Merge pull request #415 from stephenh/driver
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Replace old 'master' term with 'driver'.
2013-01-29 10:41:42 -08:00
Matei Zaharia
64ba6a8c2c
Simplify checkpointing code and RDD class a little:
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- RDD's getDependencies and getSplits methods are now guaranteed to be
called only once, so subclasses can safely do computation in there
without worrying about caching the results.
- The management of a "splits_" variable that is cleared out when we
checkpoint an RDD is now done in the RDD class.
- A few of the RDD subclasses are simpler.
- CheckpointRDD's compute() method no longer assumes that it is given a
CheckpointRDDSplit -- it can work just as well on a split from the
original RDD, because it only looks at its index. This is important
because things like UnionRDD and ZippedRDD remember the parent's
splits as part of their own and wouldn't work on checkpointed parents.
- RDD.iterator can now reuse cached data if an RDD is computed before it
is checkpointed. It seems like it wouldn't do this before (it always
called iterator() on the CheckpointRDD, which read from HDFS).
2013-01-28 22:30:12 -08:00
Stephen Haberman
13368818af
Merge branch 'master' into driver
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Conflicts:
core/src/main/scala/spark/SparkContext.scala
core/src/main/scala/spark/SparkEnv.scala
core/src/main/scala/spark/deploy/LocalSparkCluster.scala
core/src/main/scala/spark/executor/StandaloneExecutorBackend.scala
core/src/main/scala/spark/scheduler/cluster/SparkDeploySchedulerBackend.scala
core/src/main/scala/spark/scheduler/cluster/StandaloneClusterMessage.scala
core/src/main/scala/spark/scheduler/cluster/StandaloneSchedulerBackend.scala
core/src/main/scala/spark/storage/BlockManagerMaster.scala
core/src/main/scala/spark/storage/ThreadingTest.scala
core/src/test/scala/spark/MapOutputTrackerSuite.scala
2013-01-28 23:30:24 -06:00
Imran Rashid
efff7bfb33
add long and float accumulatorparams
2013-01-28 20:23:11 -08:00
Matei Zaharia
44b4a0f88f
Track workers by executor ID instead of hostname to allow multiple
...
executors per machine and remove the need for multiple IP addresses in
unit tests.
2013-01-27 19:23:49 -08:00
Matei Zaharia
49f6472c0f
Merge pull request #418 from woggling/reregister-deadlock
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Fix BlockManager reregistration deadlock; do BlockManager reregistration more asynchronously
2013-01-26 18:59:02 -08:00
Charles Reiss
ad4232b4da
Fix deadlock in BlockManager reregistration triggered by failed updates.
2013-01-26 18:30:38 -08:00
Josh Rosen
d49cf0e587
Fix JavaRDDLike.flatMap(PairFlatMapFunction) (SPARK-668).
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This workaround is easier than rewriting JavaRDDLike in Java.
2013-01-26 16:13:18 -08:00
Stephen Haberman
7dfb82a992
Replace old 'master' term with 'driver'.
2013-01-25 11:03:00 -06:00
Stephen Haberman
ec43a51b38
Merge branch 'master' into localsparkcontext
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Conflicts:
core/src/test/scala/spark/FileServerSuite.scala
core/src/test/scala/spark/RDDSuite.scala
2013-01-24 21:17:30 -06:00
Stephen Haberman
230bda2047
Add LocalSparkContext to manage common sc variable.
2013-01-24 11:01:01 -06:00
Matei Zaharia
fe5e4812fc
Merge pull request #409 from rxin/splitpruningrdd
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Added pruntSplits method to RDD.
2013-01-23 22:23:22 -08:00
Reynold Xin
eedc542a02
Removed pruneSplits method in RDD and renamed SplitsPruningRDD to
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PartitionPruningRDD.
2013-01-23 22:14:23 -08:00
Reynold Xin
45cd50d5fe
Updated assert == to ===.
2013-01-23 16:06:58 -08:00
Matei Zaharia
548856a224
Merge remote-tracking branch 'woggling/remove-machines'
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Conflicts:
core/src/main/scala/spark/scheduler/DAGScheduler.scala
2013-01-23 15:44:17 -08:00
Reynold Xin
c24b3819dd
Added an extra assert for split size check.
2013-01-23 15:34:59 -08:00
Reynold Xin
eb222b7206
Added pruntSplits method to RDD.
2013-01-23 15:29:02 -08:00
Charles Reiss
5c7422292e
Remove more dead code from test.
2013-01-23 12:59:51 -08:00
Charles Reiss
88b9d240fd
Remove dead code in test.
2013-01-23 12:40:38 -08:00
Matei Zaharia
1a3aeeca23
Merge pull request #407 from woggling/no-cache-tracker
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Eliminate CacheTracker
2013-01-23 12:28:48 -08:00
Matei Zaharia
4147e1d47b
Merge pull request #406 from tdas/master
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Changed StorageLevel and BlockManagerId API to prevent duplication in memory
2013-01-23 12:18:31 -08:00
Matei Zaharia
4d77d554e1
Merge pull request #394 from JoshRosen/add_file_fix
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Add SparkFiles.get() API to access files added through addFile().
2013-01-23 12:16:30 -08:00
Charles Reiss
0b506dd2ec
Add tests of various node failure scenarios.
2013-01-23 01:38:15 -08:00
Tathagata Das
5e11f1e51f
Modified StorageLevel API to ensure zero duplicate objects.
2013-01-22 23:42:53 -08:00
Tathagata Das
bacade6caf
Modified BlockManagerId API to ensure zero duplicate objects. Fixed BlockManagerId testcase in BlockManagerTestSuite.
2013-01-22 22:55:26 -08:00
Josh Rosen
43e9ff9596
Add test for driver hanging on exit (SPARK-530).
2013-01-22 22:47:26 -08:00
Charles Reiss
2849931000
Eliminate CacheTracker.
...
Replaces DAGScheduler's queries of CacheTracker with BlockManagerMaster
queries.
Adds CacheManager to locally coordinate computation of cached RDDs.
2013-01-22 22:19:30 -08:00
Josh Rosen
ef711902c1
Don't download files to master's working directory.
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This should avoid exceptions caused by existing
files with different contents.
I also removed some unused code.
2013-01-21 17:34:17 -08:00
Stephen Haberman
ffd1623595
Minor cleanup.
2013-01-21 15:55:46 -06:00
folone
fd6e51deec
Fixed the failing test.
2013-01-20 17:02:58 +01:00
folone
ad8aff6ca4
Merge remote-tracking branch 'upstream/master'
2013-01-20 14:43:20 +01:00
Tathagata Das
4f8fe58b25
Merge branch 'mesos-streaming' into streaming
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Conflicts:
core/src/main/scala/spark/api/java/JavaRDDLike.scala
core/src/main/scala/spark/api/java/JavaSparkContext.scala
core/src/test/scala/spark/JavaAPISuite.java
2013-01-20 01:13:56 -08:00
Patrick Wendell
d5570c7968
Adding checkpointing to Java API
2013-01-17 18:41:58 -08:00
Tathagata Das
f466ee44bc
Merge branch 'master' into streaming
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Conflicts:
core/src/main/scala/spark/MapOutputTracker.scala
2013-01-16 12:57:11 -08:00
Matei Zaharia
4beb084f64
Merge pull request #374 from woggling/null-mapout
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Generate FetchFailedException even for cached missing map outputs
2013-01-15 14:22:29 -08:00
Tathagata Das
cd1521cfdb
Merge branch 'master' into streaming
...
Conflicts:
core/src/main/scala/spark/rdd/CoGroupedRDD.scala
core/src/main/scala/spark/rdd/FilteredRDD.scala
docs/_layouts/global.html
docs/index.md
run
2013-01-15 12:08:51 -08:00
Charles Reiss
4078623b9f
Remove broken attempt to test fetching case.
2013-01-15 12:05:54 -08:00
Stephen Haberman
d228bff440
Add a test.
2013-01-15 11:48:50 -06:00
Charles Reiss
b038999797
Fix accidental spark.master.host reuse
2013-01-14 17:04:44 -08:00
Charles Reiss
7ba34bc007
Additional tests for MapOutputTracker.
2013-01-14 15:27:02 -08:00
folone
25c0739bad
Moved to scala 2.10.0. Notable changes are:
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- akka 2.0.3 → 2.1.0
- spray 1.0-M1 → 1.1-M7
For now the repl subproject is commented out, as scala reflection api changed very much since the introduction of macros.
2013-01-14 09:52:11 +01:00
Matei Zaharia
72408e8dfa
Make filter preserve partitioner info, since it can
2013-01-13 19:34:07 -08:00
Ryan LeCompte
ea20ae6618
add one extra test
2013-01-12 09:18:00 -08:00
Ryan LeCompte
2c77eeebb6
correct test params
2013-01-12 00:13:45 -08:00
Ryan LeCompte
0cfea7a2ec
add unit test
2013-01-11 23:48:07 -08:00
Stephen Haberman
8ac0f35be4
Add JavaRDDLike.keyBy.
2013-01-08 09:57:45 -06:00
Stephen Haberman
4ee6b22775
Merge branch 'master' into tupleBy
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Conflicts:
core/src/test/scala/spark/RDDSuite.scala
2013-01-08 09:10:10 -06:00
Matei Zaharia
f7cf035b9b
Merge pull request #350 from tdas/streaming
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Spark Streaming
2013-01-07 17:40:11 -08:00
Shivaram Venkataraman
b1336e2fe4
Update expected size of strings to match our dummy string class
2013-01-07 17:00:32 -08:00
Tathagata Das
4719e6d8fe
Changed locations for unit test logs.
2013-01-07 16:06:07 -08:00
Shivaram Venkataraman
55c66d365f
Use a dummy string class in Size Estimator tests to make it resistant to jdk
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versions
2013-01-07 15:58:00 -08:00
Shivaram Venkataraman
77d751731c
Remove unused BoundedMemoryCache file and associated test case.
2013-01-07 15:57:46 -08:00
Matei Zaharia
1941d9602d
Merge branch 'master' of github.com:mesos/spark
2013-01-07 16:50:39 -05:00
Matei Zaharia
9c32f300fb
Add Accumulable.setValue for easier use in Java
2013-01-07 16:50:23 -05:00
Stephen Haberman
8dc06069fe
Rename RDD.tupleBy to keyBy.
2013-01-06 15:21:45 -06:00
Matei Zaharia
b1663752c6
Merge pull request #351 from stephenh/values
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Add PairRDDFunctions.keys and values.
2013-01-05 19:15:54 -08:00
Matei Zaharia
0982572519
Add methods called just 'accumulator' for int/double in Java API
2013-01-05 22:11:28 -05:00
Matei Zaharia
86af64b0a6
Fix Accumulators in Java, and add a test for them
2013-01-05 20:55:17 -05:00
Matei Zaharia
ecf9c08901
Fix Accumulators in Java, and add a test for them
2013-01-05 20:54:08 -05:00
Stephen Haberman
1fdb6946b5
Add RDD.tupleBy.
2013-01-05 13:07:59 -06:00
Stephen Haberman
6a0db3b449
Fix typo.
2013-01-05 12:56:17 -06:00
Stephen Haberman
f4e6b9361f
Add RDD.collect(PartialFunction).
2013-01-05 12:14:08 -06:00
Stephen Haberman
8d57c78c83
Add PairRDDFunctions.keys and values.
2013-01-05 12:04:01 -06:00
Tathagata Das
3dc87dd923
Fixed compilation bug in RDDSuite created during merge for mesos/master.
2013-01-01 16:38:04 -08:00
Tathagata Das
d34dba25c2
Merge branch 'mesos' into dev-merge
2013-01-01 15:48:39 -08:00
Matei Zaharia
55809fbc6d
Merge pull request #349 from woggling/cache-finally
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Avoid stalls when computation of cached RDD throws exception
2013-01-01 08:21:33 -08:00
Charles Reiss
21636ee4fa
Test with exception while computing cached RDD.
2013-01-01 08:07:40 -08:00
Josh Rosen
f803953998
Raise exception when hashing Java arrays (SPARK-597)
2012-12-31 20:20:11 -08:00
Tathagata Das
0bc0a60d30
Modifications to make sure LocalScheduler terminate cleanly without errors when SparkContext is shutdown, to minimize spurious exception during master failure tests.
2012-12-27 15:37:33 -08:00
Tathagata Das
7c33f76291
Merge branch 'mesos' into dev-merge
2012-12-26 19:19:07 -08:00
Tathagata Das
836042bb9f
Merge branch 'dev-checkpoint' of github.com:radlab/spark into dev-merge
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Conflicts:
core/src/main/scala/spark/ParallelCollection.scala
core/src/main/scala/spark/RDD.scala
core/src/main/scala/spark/rdd/BlockRDD.scala
core/src/main/scala/spark/rdd/CartesianRDD.scala
core/src/main/scala/spark/rdd/CoGroupedRDD.scala
core/src/main/scala/spark/rdd/CoalescedRDD.scala
core/src/main/scala/spark/rdd/FilteredRDD.scala
core/src/main/scala/spark/rdd/FlatMappedRDD.scala
core/src/main/scala/spark/rdd/GlommedRDD.scala
core/src/main/scala/spark/rdd/HadoopRDD.scala
core/src/main/scala/spark/rdd/MapPartitionsRDD.scala
core/src/main/scala/spark/rdd/MapPartitionsWithSplitRDD.scala
core/src/main/scala/spark/rdd/MappedRDD.scala
core/src/main/scala/spark/rdd/PipedRDD.scala
core/src/main/scala/spark/rdd/SampledRDD.scala
core/src/main/scala/spark/rdd/ShuffledRDD.scala
core/src/main/scala/spark/rdd/UnionRDD.scala
core/src/main/scala/spark/scheduler/ResultTask.scala
core/src/test/scala/spark/CheckpointSuite.scala
2012-12-26 19:09:01 -08:00
Mark Hamstra
903f3518df
fall back to filter-map-collect when calling lookup() on an RDD without a partitioner
2012-12-24 13:18:45 -08:00
Mark Hamstra
61be8566e2
Allow distinct() to be called without parentheses when using the default number of splits.
2012-12-24 02:36:47 -08:00
Reynold Xin
eac566a7f4
Merge branch 'master' of github.com:mesos/spark into dev
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Conflicts:
core/src/main/scala/spark/MapOutputTracker.scala
core/src/main/scala/spark/PairRDDFunctions.scala
core/src/main/scala/spark/ParallelCollection.scala
core/src/main/scala/spark/RDD.scala
core/src/main/scala/spark/rdd/BlockRDD.scala
core/src/main/scala/spark/rdd/CartesianRDD.scala
core/src/main/scala/spark/rdd/CoGroupedRDD.scala
core/src/main/scala/spark/rdd/CoalescedRDD.scala
core/src/main/scala/spark/rdd/FilteredRDD.scala
core/src/main/scala/spark/rdd/FlatMappedRDD.scala
core/src/main/scala/spark/rdd/GlommedRDD.scala
core/src/main/scala/spark/rdd/HadoopRDD.scala
core/src/main/scala/spark/rdd/MapPartitionsRDD.scala
core/src/main/scala/spark/rdd/MapPartitionsWithSplitRDD.scala
core/src/main/scala/spark/rdd/MappedRDD.scala
core/src/main/scala/spark/rdd/PipedRDD.scala
core/src/main/scala/spark/rdd/SampledRDD.scala
core/src/main/scala/spark/rdd/ShuffledRDD.scala
core/src/main/scala/spark/rdd/UnionRDD.scala
core/src/main/scala/spark/storage/BlockManager.scala
core/src/main/scala/spark/storage/BlockManagerId.scala
core/src/main/scala/spark/storage/BlockManagerMaster.scala
core/src/main/scala/spark/storage/StorageLevel.scala
core/src/main/scala/spark/util/MetadataCleaner.scala
core/src/main/scala/spark/util/TimeStampedHashMap.scala
core/src/test/scala/spark/storage/BlockManagerSuite.scala
run
2012-12-20 14:53:40 -08:00
Tathagata Das
8512dd3225
Merge branch 'dev' of github.com:radlab/spark into dev-checkpoint
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Conflicts:
core/src/main/scala/spark/ParallelCollection.scala
core/src/test/scala/spark/CheckpointSuite.scala
streaming/src/main/scala/spark/streaming/DStream.scala
2012-12-20 14:24:19 -08:00
Tathagata Das
fe777eb77d
Fixed bugs in CheckpointRDD and spark.CheckpointSuite.
2012-12-20 13:39:27 -08:00
Reynold Xin
9397c5014e
Let the slave notify the master block removal.
2012-12-20 01:37:09 -08:00
Tathagata Das
5184141936
Introduced getSpits, getDependencies, and getPreferredLocations in RDD and RDDCheckpointData.
2012-12-18 13:30:53 -08:00
Reynold Xin
8c01295b85
Fixed conflicts from merging Charles' and TD's block manager changes.
2012-12-14 00:26:36 -08:00
Reynold Xin
0235667f73
Merge branch 'master' of github.com:mesos/spark into spark-633
2012-12-13 22:33:41 -08:00
Reynold Xin
97434f49b8
Merged TD's block manager refactoring.
2012-12-13 22:32:19 -08:00
Reynold Xin
f4a9e1b9be
Fixed the broken Java unit test from SPARK-635.
2012-12-13 22:22:12 -08:00
Reynold Xin
1b7a0451ed
Added the ability in block manager to remove blocks.
2012-12-13 00:04:42 -08:00
Tathagata Das
8e74fac215
Made checkpoint data in RDDs optional to further reduce serialized size.
2012-12-11 15:36:12 -08:00
Tathagata Das
fa28f25619
Fixed bug in UnionRDD and CoGroupedRDD
2012-12-11 13:59:43 -08:00
Tathagata Das
2a87d816a2
Added clear property to JavaAPISuite to remove port binding errors.
2012-12-11 01:44:43 -08:00
Tathagata Das
746afc2e65
Bunch of bug fixes related to checkpointing in RDDs. RDDCheckpointData object is used to lock all serialization and dependency changes for checkpointing. ResultTask converted to Externalizable and serialized RDD is cached like ShuffleMapTask.
2012-12-10 23:36:37 -08:00
Charles Reiss
5d3e917d09
Use Akka scheduler for BlockManager heart beats.
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Adds required ActorSystem argument to BlockManager constructors.
2012-12-10 00:31:50 -08:00
Tathagata Das
e427216018
Removed unnecessary testcases.
2012-12-08 12:46:59 -08:00
Tathagata Das
1f3a75ae9e
Modified checkpoint testsuite to more comprehensively test checkpointing of various RDDs. Fixed checkpoint bug (splits referring to parent RDDs or parent splits) in UnionRDD and CoalescedRDD. Fixed bug in testing ShuffledRDD. Removed unnecessary and useless map-side combining step for narrow dependencies in CoGroupedRDD. Removed unncessary WeakReference stuff from many other RDDs.
2012-12-07 13:45:52 -08:00
Charles Reiss
a2a94fdbc7
Tests for block manager heartbeats.
2012-12-05 23:36:05 -08:00
Tathagata Das
21a0852976
Refactored RDD checkpointing to minimize extra fields in RDD class.
2012-12-04 22:10:25 -08:00
Tathagata Das
e463ae4920
Modified StorageLevel and BlockManagerId to cache common objects and use cached object while deserializing.
2012-11-28 14:05:01 -08:00
Matei Zaharia
3ebd8e1885
Added zip to Java API
2012-11-27 22:38:09 -08:00
Matei Zaharia
27e43abd19
Added a zip() operation for RDDs with the same shape (number of
...
partitions and number of elements in each partition)
2012-11-27 22:27:47 -08:00
Matei Zaharia
935c468b71
Merge pull request #311 from woggling/map-output-npe
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Fix NullPointerException when map output unregistered from MapOutputTracker twice
2012-11-27 20:50:48 -08:00
Reynold Xin
f24bfd2dd1
For size compression, compress non zero values into non zero values.
2012-11-27 19:20:45 -08:00
Charles Reiss
5fa868b98b
Tests for MapOutputTracker.
2012-11-27 16:05:36 -08:00
Tathagata Das
10c1abcb6a
Fixed checkpointing bug in CoGroupedRDD. CoGroupSplits kept around the RDD splits of its parent RDDs, thus checkpointing its parents did not release the references to the parent splits.
2012-11-17 17:27:00 -08:00
Tathagata Das
04e9e9d93c
Refactored BlockManagerMaster (not BlockManagerMasterActor) to simplify the code and fix live lock problem in unlimited attempts to contact the master. Also added testcases in the BlockManagerSuite to test BlockManagerMaster methods getPeers and getLocations.
2012-11-11 08:54:21 -08:00
Tathagata Das
34e569f40e
Added 'synchronized' to RDD serialization to ensure checkpoint-related changes are reflected atomically in the task closure. Added to tests to ensure that jobs running on an RDD on which checkpointing is in progress does hurt the result of the job.
2012-10-31 00:56:40 -07:00
Tathagata Das
0dcd770fdc
Added checkpointing support to all RDDs, along with CheckpointSuite to test checkpointing in them.
2012-10-30 16:09:37 -07:00
Matei Zaharia
0bd20c63e2
Merge remote-tracking branch 'JoshRosen/shuffle_refactoring' into dev
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Conflicts:
core/src/main/scala/spark/Dependency.scala
core/src/main/scala/spark/rdd/CoGroupedRDD.scala
core/src/main/scala/spark/rdd/ShuffledRDD.scala
2012-10-23 22:01:45 -07:00
Matei Zaharia
8815aeba0c
Take executor environment vars as an arguemnt to SparkContext
2012-10-13 15:31:11 -07:00
Josh Rosen
33cd3a0c12
Remove map-side combining from ShuffleMapTask.
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This separation of concerns simplifies the
ShuffleDependency and ShuffledRDD interfaces.
Map-side combining can be performed in a
mapPartitions() call prior to shuffling the RDD.
I don't anticipate this having much of a
performance impact: in both approaches, each tuple
is hashed twice: once in the bucket partitioning
and once in the combiner's hashtable. The same
steps are being performed, but in a different
order and through one extra Iterator.
2012-10-13 14:59:20 -07:00
Josh Rosen
10bcd217d2
Remove mapSideCombine field from Aggregator.
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Instead, the presence or absense of a ShuffleDependency's aggregator
will control whether map-side combining is performed.
2012-10-13 14:59:20 -07:00
Josh Rosen
4775c55641
Change ShuffleFetcher to return an Iterator.
2012-10-13 14:59:20 -07:00
Matei Zaharia
682b2d9329
Added a test for when an RDD only partially fits in memory
2012-10-12 14:58:26 -07:00
Shivaram Venkataraman
8577523f37
Add test to verify if RDD is computed even if block manager has insufficient
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memory
2012-10-12 14:14:57 -07:00
Shivaram Venkataraman
2cf40c5fd5
Change block manager to accept a ArrayBuffer instead of an iterator to ensure
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that the computation can proceed even if we run out of memory to cache the
block. Update CacheTracker to use this new interface
2012-10-11 00:42:46 -07:00
Matei Zaharia
efc5423210
Made compression configurable separately for shuffle, broadcast and RDDs
2012-10-07 11:30:53 -07:00
Reynold Xin
80f59e17e2
Fixed a bug in addFile that if the file is specified as "file:///", the
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symlink is created wrong for local mode.
2012-10-07 00:54:38 -07:00
Matei Zaharia
eca570f66a
Removed the need to sleep in tests due to waiting for Akka to shut down
2012-10-07 00:17:59 -07:00
Matei Zaharia
dc28a3ac0a
Modified shuffle to limit the maximum outstanding data size in bytes,
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instead of the maximum number of outstanding fetches. This should make
it faster when there are many small map output files, as well as more
robust to overallocating memory on large map outputs.
2012-10-06 20:07:10 -07:00
Matei Zaharia
9a3b3f32a3
Pass sizes of map outputs back to MapOutputTracker
2012-10-06 18:46:04 -07:00
Matei Zaharia
716e10ca32
Minor formatting fixes
2012-10-05 22:03:06 -07:00
Andy Konwinski
a242cdd0a6
Factor subclasses of RDD out of RDD.scala into their own classes
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in the rdd package.
2012-10-05 19:53:54 -07:00
Andy Konwinski
e0067da082
Moves all files in core/src/main/scala/ that have RDD in them from
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package spark to package spark.rdd and updates all references to them.
2012-10-05 19:23:45 -07:00
Shivaram Venkataraman
b6e4f46a96
Fix SizeEstimator tests to work with String classes in JDK 6 and 7
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Conflicts:
core/src/test/scala/spark/BoundedMemoryCacheSuite.scala
2012-10-05 16:58:57 -07:00
Imran Rashid
e0698f8f26
change tests to show utility of localValue
2012-10-04 23:05:42 -07:00
Imran Rashid
82a3327862
make accumulator.localValue public, add tests
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Conflicts:
core/src/test/scala/spark/AccumulatorSuite.scala
2012-10-04 23:05:01 -07:00
Matei Zaharia
97cbd699d7
Merge branch 'dev' of github.com:mesos/spark into dev
2012-10-02 17:31:01 -07:00
Matei Zaharia
5fda59ab99
Added a test for overly large blocks in memory store
2012-10-02 17:30:40 -07:00
Matei Zaharia
6098f7e87a
Fixed cache replacement behavior of BlockManager:
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- Partitions that get dropped to disk will now be loaded back into RAM
after they're accessed again
- Same-RDD rule for cache replacement is now implemented (don't drop
partitions from an RDD to make room for other partitions from itself)
- Items stored as MEMORY_AND_DISK go into memory only first, instead of
being eagerly written out to disk
- MemoryStore.ensureFreeSpace is called within a lock on the writer
thread to prevent race conditions (this can still be optimized to
allow multiple concurrent calls to it but it's a start)
- MemoryStore does not accept blocks larger than its limit
2012-10-02 17:25:38 -07:00
Reynold Xin
0898a21b95
Merge branch 'dev' of https://github.com/mesos/spark into dev
2012-10-02 13:08:01 -07:00
Matei Zaharia
22684653a5
Revert "Place Spray repo ahead of Cloudera in Maven search path"
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This reverts commit 42e0a68082
.
2012-10-02 12:01:32 -07:00
Reynold Xin
b8cd681169
Allow whitespaces in cluster URL configuration for local cluster.
2012-10-02 11:52:12 -07:00
Matei Zaharia
42e0a68082
Place Spray repo ahead of Cloudera in Maven search path
2012-10-02 11:37:19 -07:00
Matei Zaharia
74a9244255
Write all unit test output to a file
2012-10-01 15:07:42 -07:00
Matei Zaharia
0b84871dbc
Remove some printlns in tests
2012-10-01 10:57:26 -07:00
Matei Zaharia
2314132d57
Added a (failing) test for LRU with MEMORY_AND_DISK.
2012-09-30 22:52:16 -07:00
Matei Zaharia
83143f9a5f
Fixed several bugs that caused weird behavior with files in spark-shell:
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- SizeEstimator was following through a ClassLoader field of Hadoop
JobConfs, which referenced the whole interpreter, Scala compiler, etc.
Chaos ensued, giving an estimated size in the tens of gigabytes.
- Broadcast variables in local mode were only stored as MEMORY_ONLY and
never made accessible over a server, so they fell out of the cache when
they were deemed too large and couldn't be reloaded.
2012-09-30 21:19:39 -07:00
Matei Zaharia
fd0374b9de
Comment
2012-09-29 21:43:06 -07:00
Matei Zaharia
143ef4f90d
Added a CoalescedRDD class for reducing the number of partitions in an RDD.
2012-09-29 21:30:52 -07:00
Matei Zaharia
c45758ddde
Comment
2012-09-29 20:27:54 -07:00
Matei Zaharia
9b326d01e9
Made BlockManager unmap memory-mapped files when necessary to reduce the
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number of open files. Also optimized sending of disk-based blocks.
2012-09-29 20:21:54 -07:00
Matei Zaharia
009b0e37e7
Added an option to compress blocks in the block store
2012-09-27 18:45:44 -07:00
Matei Zaharia
7bcb08cef5
Renamed storage levels to something cleaner; fixes #223 .
2012-09-27 17:50:59 -07:00
Matei Zaharia
920fab23c3
Merge pull request #222 from rxin/dev
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Added MapPartitionsWithSplitRDD.
2012-09-26 23:16:45 -07:00
Matei Zaharia
1ef4f0fbd2
Allow controlling number of splits in sortByKey.
2012-09-26 19:18:47 -07:00
Reynold Xin
1ad1331a34
Added MapPartitionsWithSplitRDD.
2012-09-26 17:11:28 -07:00
Matei Zaharia
d71a358c46
Fixed a test that was getting extremely lucky before, and increased the
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number of samples used for sorting
2012-09-26 00:25:34 -07:00
Matei Zaharia
6eeb379cf8
Fix some test issues
2012-09-24 15:39:58 -07:00
Reynold Xin
397d3816e1
Separated ShuffledRDD into multiple classes: RepartitionShuffledRDD,
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ShuffledSortedRDD, and ShuffledAggregatedRDD.
2012-09-19 12:31:45 -07:00
Denny
5e4076e3f2
Merge branch 'dev' into feature/fileserver
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Conflicts:
core/src/main/scala/spark/SparkContext.scala
2012-09-11 16:57:17 -07:00
Matei Zaharia
6d7f907e73
Manually merge pull request #175 by Imran Rashid
2012-09-11 16:00:06 -07:00
Denny
4d3471dd07
Fix serialization bugs and added local cluster tests
2012-09-10 15:39:58 -07:00
Denny
b864c36a30
Dynamically adding jar files and caching fileSets.
2012-09-10 12:49:09 -07:00
Denny
f275fb07da
General FileServer
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A general fileserver for both JARs and regular files.
2012-09-10 12:48:59 -07:00
Matei Zaharia
a13780670d
Added a unit test for local-cluster mode and simplified some of the code involved in that
2012-09-10 12:48:58 -07:00
Matei Zaharia
995982b3c9
Added a unit test for local-cluster mode and simplified some of the code involved in that
2012-09-07 17:08:36 -07:00
Reynold Xin
c308fbcb79
Removed cache add/remove log messages from CacheTracker.
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Added log messages on BlockManagerMaster to reflect block add/remove.
Also did some minor cleanup of storage package code.
2012-09-05 15:59:48 -07:00
Reynold Xin
a8a2a08a1a
Added a test for testing map-side combine on/off switch.
2012-08-30 12:34:28 -07:00
Matei Zaharia
2c16ae36d7
Set log level in tests to WARN
2012-08-23 20:38:14 -07:00
Matei Zaharia
deedb9e7b7
Fix further issues with tests and broadcast.
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The broadcast fix is to store values as MEMORY_ONLY_DESER instead of
MEMORY_ONLY, which will save substantial time on serialization.
2012-08-23 20:31:49 -07:00
Shivaram Venkataraman
0f4fbb057b
Change BlockManagerSuite test cases to use a deterministic size estimator and
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update the results to match the new estimates
2012-08-13 13:32:23 -07:00
Shivaram Venkataraman
22ba3a3f77
Add test-cases for 32-bit and no-compressed oops scenarios.
2012-08-13 13:32:10 -07:00
Shivaram Venkataraman
1f68c4b03b
Update test cases to match the new size estimates. Uses 64-bit and compressed
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oops setting to get deterministic results
2012-08-13 13:31:54 -07:00
Matei Zaharia
6ae3c375a9
Renamed apply() to call() in Java API and allowed it to throw Exceptions
2012-08-12 23:10:19 +02:00
Matei Zaharia
e463e7a333
Merge pull request #167 from JoshRosen/piped-rdd-fixes
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Detect non-zero exit status from PipedRDD process
2012-08-10 00:56:42 -07:00
Shivaram Venkataraman
ce3444d2cb
Fix testcheckpoint to reuse spark context defined in the class
2012-08-03 18:52:26 -07:00
Matei Zaharia
62898b631f
Made range partition balance tests more aggressive.
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This is because we pull out such a large sample (10x the number of
partitions) that we should expect pretty good balance. The tests are
also deterministic so there's no worry about them failing irreproducibly.
2012-08-03 16:46:48 -04:00
Matei Zaharia
6601a6212b
Added a unit test for cross-partition balancing in sort, and changes to
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RangePartitioner to make it pass. It turns out that the first partition
was always kind of small due to how we picked partition boundaries.
2012-08-03 16:40:45 -04:00
Matei Zaharia
3ee2530c0c
Merge branch 'block-manager-fix' into dev
2012-07-30 13:58:46 -07:00
Matei Zaharia
400221f851
Merge branch 'dev' of git://github.com/tdas/spark into dev
2012-07-30 13:54:57 -07:00
Matei Zaharia
ed1b0f8388
Made BlockManagerMaster no longer be a singleton.
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Also cleaned up a few formatting things throughout block manager code.
2012-07-30 13:53:47 -07:00
Matei Zaharia
d7f089323a
Fixed AccumulatorSuite to clean up SparkContext with BeforeAndAfter
2012-07-28 20:25:42 -07:00
Imran Rashid
f7149c5e46
tasks cannot access value of accumulator
2012-07-28 20:16:17 -07:00
Imran Rashid
f1face1ea9
rename addToAccum to addAccumulator
2012-07-28 20:16:01 -07:00
Imran Rashid
2d666b9d76
add some functionality to Vector, delete copy in AccumulatorSuite
2012-07-28 20:15:51 -07:00
Imran Rashid
83659af11c
Accumulator now inherits from Accumulable, whcih simplifies a bunch of other things (eg., no +:=)
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Conflicts:
core/src/main/scala/spark/Accumulators.scala
2012-07-28 20:13:51 -07:00
Imran Rashid
ae07f3864c
add Accumulatable, add corresponding docs & tests for accumulators
2012-07-28 20:12:41 -07:00
Matei Zaharia
f6f917bd00
Add a sleep to prevent a failing test.
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The BlockManager's put seems to be slightly asynchronous, which can
cause it to fail this test by not removing stuff from the cache before
we put the next value. We should probably change the semantics of put()
in this case but it's hard right now. It will also be hard for
asynchronously replicated puts.
2012-07-27 16:59:36 -07:00
Matei Zaharia
c0c78d2119
Renamed test more descriptively
2012-07-27 16:28:18 -07:00
Matei Zaharia
dee8ff1b9d
Added a second version of union() without varargs.
2012-07-27 16:27:52 -07:00
Matei Zaharia
b51d733a57
Fixed Java union methods having same erasure.
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Changed union() methods on lists to take a separate "first element"
argument in order to differentiate them to the compiler, because Java 7
considered it an error to have them all take Lists parameterized with
different types.
2012-07-27 12:23:27 -07:00
Tathagata Das
024905f682
Added BlockRDD and a first-cut version of checkpoint() to RDD class.
2012-07-27 12:00:49 -07:00
Tathagata Das
0426769f89
Modified the block dropping code for better performance.
2012-07-26 20:53:45 -07:00
Matei Zaharia
5c5aa2ff81
Merge pull request #153 from JoshRosen/new-java-api
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Java API
2012-07-26 17:20:52 -07:00
Josh Rosen
c5e2810dc7
Add persist(), splits(), glom(), and mapPartitions() to Java API.
2012-07-26 12:46:47 -07:00
Josh Rosen
bf61c10072
Detect non-zero exit status from PipedRDD process.
2012-07-26 11:32:59 -07:00
Denny
4f4a34c025
Stlystic changes
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Conflicts:
core/src/test/scala/spark/MesosSchedulerSuite.scala
2012-07-23 16:32:20 -07:00
Denny
866e6949df
Always destroy SparkContext in after block for the unit tests.
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Conflicts:
core/src/test/scala/spark/ShuffleSuite.scala
2012-07-23 16:29:17 -07:00
Josh Rosen
042dcbde33
Add type annotations to Java API methods.
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Add missing Scala Map to java.util.Map conversions.
2012-07-22 17:35:29 -07:00
Josh Rosen
01dce3f569
Add Java API
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Add distinct() method to RDD.
Fix bug in DoubleRDDFunctions.
2012-07-18 17:34:29 -07:00
Matei Zaharia
408b5a1332
More work on deploy code (adding Worker class)
2012-06-30 16:45:57 -07:00
Matei Zaharia
2fb6e7d71e
Initial framework to get a master and web UI up.
2012-06-30 14:45:55 -07:00
Matei Zaharia
c53670b9bf
Various code style fixes, mostly from IntelliJ IDEA
2012-06-29 18:47:12 -07:00
Matei Zaharia
3920189932
Upgraded to Akka 2 and fixed test execution (which was still parallel
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across projects).
2012-06-28 23:51:28 -07:00
Tathagata Das
e896a505e2
Added testcase for ByteBufferInputStream bugs.
2012-06-17 16:11:12 -07:00
Matei Zaharia
f58da6164e
Merge branch 'master' into dev
2012-06-15 23:47:11 -07:00
Tathagata Das
c6156da9e2
Multiple bug fixes to pass the testsuites ShuffleSuite and BlockManagerSuite.
2012-06-13 16:26:49 -04:00
Matei Zaharia
e75b1b5cb4
Change the default broadcast implementation to a simple HTTP-based
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broadcast. Fixes #139 .
2012-06-09 15:58:07 -07:00
Matei Zaharia
a96558caa3
Performance improvements to shuffle operations: in particular, preserve
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RDD partitioning in more cases where it's possible, and use iterators
instead of materializing collections when doing joins.
2012-06-09 14:44:18 -07:00
Matei Zaharia
c2c7299d7a
Added BlockManagerSuite, which I'd forgotten to merge.
2012-06-07 13:47:10 -07:00
Matei Zaharia
63051dd2bc
Merge in engine improvements from the Spark Streaming project, developed
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jointly with Tathagata Das and Haoyuan Li. This commit imports the changes
and ports them to Mesos 0.9, but does not yet pass unit tests due to
various classes not supporting a graceful stop() yet.
2012-06-07 12:45:38 -07:00
Matei Zaharia
6ae2746d1e
Handle arrays that contain the same element many times better in
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SizeEstimator. Also added a test for SizeEstimator. Fixes #136 .
2012-06-06 16:13:02 -07:00
Matei Zaharia
0a617958d1
Some refactoring to make BoundedMemoryCache test similar to others
2012-06-06 16:12:08 -07:00
Matei Zaharia
e141f644ca
Merge pull request #132 from Benky/rb-first-iteration
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Little refactoring and unit tests for CacheTrackerActor
2012-05-26 13:15:06 -07:00
Richard Benkovsky
ae64920337
MesosScheduler refactoring
2012-05-22 11:04:54 +02:00
Richard Benkovsky
3a1bcd4028
Added tests for CacheTrackerActor
2012-05-22 11:04:54 +02:00
Richard Benkovsky
518506a7c5
Added tests for Utils.copyStream
2012-05-22 11:04:51 +02:00
Richard Benkovsky
565245871f
BoundedMemoryCache.put fails when estimated size of 'value' is larger than cache capacity
2012-05-20 22:13:35 +02:00
Reynold Xin
16461e2eda
Updated Cache's put method to use a case class for response. Previously
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it was pretty ugly that put() should return -1 for failures.
2012-05-15 00:31:52 -07:00
Reynold Xin
019e48833f
Added the capacity to report cache usage status back to the cache
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trackor. This is essential for building a dashboard to see the status of
caches on all slaves.
2012-05-14 18:39:04 -07:00
Reynold Xin
761ea65a98
Added a test for the previous commit (failing to serialize task results
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would throw an exception for local tasks).
2012-04-24 15:14:35 -07:00
Reynold Xin
e601b3b9e5
Added the ability to set environmental variables in piped rdd.
2012-04-17 16:40:56 -07:00
Matei Zaharia
c7af538ac1
Some fixes to sorting for when the RDD has fewer elements than the
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number of partitions we ask to partition it into. Also, removed a test
that was taking way too long to run.
2012-03-17 13:08:36 -07:00
Matei Zaharia
1e10df0a46
Merge pull request #111 from alupher/master
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Adding sorting to RDDs
2012-02-24 15:50:14 -08:00
Antonio
0d93d95bcf
Removed unnecessary import
2012-02-21 19:57:12 -08:00
Antonio
2990298f71
Added sorting testing suite
2012-02-21 19:54:21 -08:00
Matei Zaharia
aa04f87cd2
Added support for parallel execution of jobs in DAGScheduler.
2012-02-19 22:50:23 -08:00
Matei Zaharia
a766780f4c
Added some tests for multithreaded access to Spark.
2012-02-09 22:27:53 -08:00
Matei Zaharia
43a3335090
Simplifying test
2012-02-05 22:46:51 -08:00
Matei Zaharia
eb05154b7a
Fixed a failure recovery bug and added some tests for fault recovery.
2012-01-13 19:08:25 -08:00
Matei Zaharia
e269f6f7ea
Register RDDs with the MapOutputTracker even if they have no partitions.
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Fixes #105 .
2012-01-05 15:59:20 -05:00
Matei Zaharia
735843a049
Merge remote-tracking branch 'origin/charles-newhadoop'
2011-12-02 21:59:30 -08:00
Charles Reiss
66f05f383e
Add new Hadoop API reading support.
2011-12-01 14:02:10 -08:00
Charles Reiss
02d43e6986
Add new Hadoop API writing support.
2011-12-01 14:01:28 -08:00
Matei Zaharia
22b8fcf632
Added fold() and aggregate() operations that reuse an object to
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merge results into rather than requiring a new object allocation
for each element merged. Fixes #95 .
2011-11-30 11:37:47 -08:00
Matei Zaharia
9e4c79a4d3
Closure cleaner unit test
2011-11-08 00:40:15 -08:00
Matei Zaharia
c2b7fd6899
Make parallelize() work efficiently for ranges of Long, Double, etc
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(splitting them into sub-ranges). Fixes #87 .
2011-11-02 15:16:02 -07:00
Matei Zaharia
d12122502b
Various improvements to Kryo serializer:
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- Replaced modified Kryo version with the standard one augmented with
the kryo-serializers package, which includes support for classes with
no-arg constructors (that was why we had a modified Kryo before)
- The kryo-serializers version also fixes issue #72 .
- Added a bunch of tests.
- Serialize maps and a few other common types properly by default.
2011-07-21 22:09:33 -07:00
Matei Zaharia
e4c3402d2d
Renamed ParallelArray to ParallelCollection
2011-07-14 14:47:01 -04:00
Matei Zaharia
2604939f64
Simplified and documented code a little and added test
2011-07-14 00:19:00 -04:00
Matei Zaharia
9c0069188b
Updated save code to allow non-file-based OutputFormats and added a test
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for file-related stuff
2011-07-13 23:04:06 -04:00
Matei Zaharia
842e14d567
Added mapPartitions operation and a bunch of tests for RDD ops
2011-07-13 00:19:52 -04:00
Olivier Grisel
2e3531d8bf
Implemented RDD.leftOuterJoin and RDD.rightOuterJoin
2011-06-24 11:00:51 +02:00
Olivier Grisel
005d1605a4
add missing test for RDD.groupWith
2011-06-23 02:10:52 +02:00
Ismael Juma
1396678baa
Move REPL classes to separate module.
2011-05-27 11:22:50 +01:00
Matei Zaharia
4db50e26c7
Fixed unit tests by making them clean up the SparkContext after use and
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thus clean up the various singletons (RDDCache, MapOutputTracker, etc).
This isn't perfect yet (ideally we shouldn't use singleton objects at
all) but we can fix that later.
2011-05-13 12:03:58 -07:00
Matei Zaharia
e5c4cd8a5e
Made examples and core subprojects
2011-02-01 15:11:08 -08:00