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4979 commits

Author SHA1 Message Date
Nathan Howell 21fde57f15 [SPARK-18352][SQL] Support parsing multiline json files
## What changes were proposed in this pull request?

If a new option `wholeFile` is set to `true` the JSON reader will parse each file (instead of a single line) as a value. This is done with Jackson streaming and it should be capable of parsing very large documents, assuming the row will fit in memory.

Because the file is not buffered in memory the corrupt record handling is also slightly different when `wholeFile` is enabled: the corrupt column will contain the filename instead of the literal JSON if there is a parsing failure. It would be easy to extend this to add the parser location (line, column and byte offsets) to the output if desired.

These changes have allowed types other than `String` to be parsed. Support for `UTF8String` and `Text` have been added (alongside `String` and `InputFormat`) and no longer require a conversion to `String` just for parsing.

I've also included a few other changes that generate slightly better bytecode and (imo) make it more obvious when and where boxing is occurring in the parser. These are included as separate commits, let me know if they should be flattened into this PR or moved to a new one.

## How was this patch tested?

New and existing unit tests. No performance or load tests have been run.

Author: Nathan Howell <nhowell@godaddy.com>

Closes #16386 from NathanHowell/SPARK-18352.
2017-02-16 20:51:19 -08:00
Zheng RuiFeng 54a30c8a70 [SPARK-19436][SQL] Add missing tests for approxQuantile
## What changes were proposed in this pull request?
1, check the behavior with illegal `quantiles` and `relativeError`
2, add tests for `relativeError` > 1
3, update tests for `null` data
4, update some docs for javadoc8

## How was this patch tested?
local test in spark-shell

Author: Zheng RuiFeng <ruifengz@foxmail.com>
Author: Ruifeng Zheng <ruifengz@foxmail.com>

Closes #16776 from zhengruifeng/fix_approxQuantile.
2017-02-16 09:42:13 -08:00
hyukjinkwon 3b4376876f
[MINOR][BUILD] Fix javadoc8 break
## What changes were proposed in this pull request?

These error below seems caused by unidoc that does not understand double commented block.

```
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:69: error: class, interface, or enum expected
[error]  * MapGroupsWithStateFunction&lt;String, Integer, Integer, String&gt; mappingFunction =
[error]                                  ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:69: error: class, interface, or enum expected
[error]  * MapGroupsWithStateFunction&lt;String, Integer, Integer, String&gt; mappingFunction =
[error]                                                                       ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:70: error: class, interface, or enum expected
[error]  *    new MapGroupsWithStateFunction&lt;String, Integer, Integer, String&gt;() {
[error]                                         ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:70: error: class, interface, or enum expected
[error]  *    new MapGroupsWithStateFunction&lt;String, Integer, Integer, String&gt;() {
[error]                                                                             ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:72: error: illegal character: '#'
[error]  *      &#64;Override
[error]          ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:72: error: class, interface, or enum expected
[error]  *      &#64;Override
[error]              ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:73: error: class, interface, or enum expected
[error]  *      public String call(String key, Iterator&lt;Integer&gt; value, KeyedState&lt;Integer&gt; state) {
[error]                ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:73: error: class, interface, or enum expected
[error]  *      public String call(String key, Iterator&lt;Integer&gt; value, KeyedState&lt;Integer&gt; state) {
[error]                                                    ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:73: error: class, interface, or enum expected
[error]  *      public String call(String key, Iterator&lt;Integer&gt; value, KeyedState&lt;Integer&gt; state) {
[error]                                                                ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:73: error: class, interface, or enum expected
[error]  *      public String call(String key, Iterator&lt;Integer&gt; value, KeyedState&lt;Integer&gt; state) {
[error]                                                                                     ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:73: error: class, interface, or enum expected
[error]  *      public String call(String key, Iterator&lt;Integer&gt; value, KeyedState&lt;Integer&gt; state) {
[error]                                                                                                 ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:76: error: class, interface, or enum expected
[error]  *          boolean shouldRemove = ...; // Decide whether to remove the state
[error]  ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:77: error: class, interface, or enum expected
[error]  *          if (shouldRemove) {
[error]  ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:79: error: class, interface, or enum expected
[error]  *          } else {
[error]  ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:81: error: class, interface, or enum expected
[error]  *            state.update(newState); // Set the new state
[error]  ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:82: error: class, interface, or enum expected
[error]  *          }
[error]  ^
[error] .../forked/spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:85: error: class, interface, or enum expected
[error]  *          state.update(initialState);
[error]  ^
[error] .../forked/spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:86: error: class, interface, or enum expected
[error]  *        }
[error]  ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:90: error: class, interface, or enum expected
[error]  * </code></pre>
[error]  ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:92: error: class, interface, or enum expected
[error]  * tparam S User-defined type of the state to be stored for each key. Must be encodable into
[error]            ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:93: error: class, interface, or enum expected
[error]  *           Spark SQL types (see {link Encoder} for more details).
[error]                                          ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:94: error: class, interface, or enum expected
[error]  * since 2.1.1
[error]           ^
```

And another link seems unrecognisable.

```
.../spark/sql/core/target/java/org/apache/spark/sql/KeyedState.java:16: error: reference not found
[error]  * That is, in every batch of the {link streaming.StreamingQuery StreamingQuery},
[error]
```

Note that this PR does not fix the two breaks as below:

```
[error] .../spark/sql/core/target/java/org/apache/spark/sql/DataFrameStatFunctions.java:43: error: unexpected content
[error]    * see {link DataFrameStatsFunctions.approxQuantile(col:Str* approxQuantile} for
[error]      ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/DataFrameStatFunctions.java:52: error: bad use of '>'
[error]    * param relativeError The relative target precision to achieve (>= 0).
[error]                                                                     ^
[error]
```

because these seem probably fixed soon in https://github.com/apache/spark/pull/16776 and I intended to avoid potential conflicts.

## How was this patch tested?

Manually via `jekyll build`

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16926 from HyukjinKwon/javadoc-break.
2017-02-16 12:35:43 +00:00
Sean Owen 0e2405490f
[SPARK-19550][BUILD][CORE][WIP] Remove Java 7 support
- Move external/java8-tests tests into core, streaming, sql and remove
- Remove MaxPermGen and related options
- Fix some reflection / TODOs around Java 8+ methods
- Update doc references to 1.7/1.8 differences
- Remove Java 7/8 related build profiles
- Update some plugins for better Java 8 compatibility
- Fix a few Java-related warnings

For the future:

- Update Java 8 examples to fully use Java 8
- Update Java tests to use lambdas for simplicity
- Update Java internal implementations to use lambdas

## How was this patch tested?

Existing tests

Author: Sean Owen <sowen@cloudera.com>

Closes #16871 from srowen/SPARK-19493.
2017-02-16 12:32:45 +00:00
Kevin Yu 3871d94a69 [SPARK-18871][SQL][TESTS] New test cases for IN/NOT IN subquery 3rd batch
## What changes were proposed in this pull request?

This is 3ird batch of test case for IN/NOT IN subquery. In this PR, it has these test files:

`in-having.sql`
`in-joins.sql`
`in-multiple-columns.sql`

These are the queries and results from running on DB2.
[in-having DB2 version](https://github.com/apache/spark/files/772668/in-having.sql.db2.txt)
[output of in-having](https://github.com/apache/spark/files/772670/in-having.sql.db2.out.txt)
[in-joins DB2 version](https://github.com/apache/spark/files/772672/in-joins.sql.db2.txt)
[output of in-joins](https://github.com/apache/spark/files/772673/in-joins.sql.db2.out.txt)
[in-multiple-columns DB2 version](https://github.com/apache/spark/files/772678/in-multiple-columns.sql.db2.txt)
[output of in-multiple-columns](https://github.com/apache/spark/files/772680/in-multiple-columns.sql.db2.out.txt)

## How was this patch tested?
This pr is adding new test cases. We compare the result from spark with the result from another RDBMS(We used DB2 LUW). If the results are the same, we assume the result is correct.

Author: Kevin Yu <qyu@us.ibm.com>

Closes #16841 from kevinyu98/spark-18871-33.
2017-02-16 00:02:15 -08:00
Tejas Patil f041e55eef [SPARK-19618][SQL] Inconsistency wrt max. buckets allowed from Dataframe API vs SQL
## What changes were proposed in this pull request?

Jira: https://issues.apache.org/jira/browse/SPARK-19618

Moved the check for validating number of buckets from `DataFrameWriter` to `BucketSpec` creation

## How was this patch tested?

- Added more unit tests

Author: Tejas Patil <tejasp@fb.com>

Closes #16948 from tejasapatil/SPARK-19618_max_buckets.
2017-02-15 22:45:58 -08:00
Kevin Yu 8487902a98 [SPARK-18871][SQL][TESTS] New test cases for IN/NOT IN subquery 4th batch
## What changes were proposed in this pull request?

This is 4th batch of test case for IN/NOT IN subquery. In this PR, it has these test files:

`in-set-operations.sql`
`in-with-cte.sql`
`not-in-joins.sql`

Here are the queries and results from running on DB2.

[in-set-operations DB2 version](https://github.com/apache/spark/files/772846/in-set-operations.sql.db2.txt)
[Output of in-set-operations](https://github.com/apache/spark/files/772848/in-set-operations.sql.db2.out.txt)
[in-with-cte DB2 version](https://github.com/apache/spark/files/772849/in-with-cte.sql.db2.txt)
[Output of in-with-cte](https://github.com/apache/spark/files/772856/in-with-cte.sql.db2.out.txt)
[not-in-joins DB2 version](https://github.com/apache/spark/files/772851/not-in-joins.sql.db2.txt)
[Output of not-in-joins](https://github.com/apache/spark/files/772852/not-in-joins.sql.db2.out.txt)

## How was this patch tested?

This pr is adding new test cases. We compare the result from spark with the result from another RDBMS(We used DB2 LUW). If the results are the same, we assume the result is correct.

Author: Kevin Yu <qyu@us.ibm.com>

Closes #16915 from kevinyu98/spark-18871-44.
2017-02-15 21:29:28 -08:00
Shixiong Zhu fc02ef95cd [SPARK-19603][SS] Fix StreamingQuery explain command
## What changes were proposed in this pull request?

`StreamingQuery.explain` doesn't show the correct streaming physical plan right now because `ExplainCommand` receives a runtime batch plan and its `logicalPlan.isStreaming` is always false.

This PR adds `streaming` parameter to `ExplainCommand` to allow `StreamExecution` to specify that it's a streaming plan.

Examples of the explain outputs:

- streaming DataFrame.explain()
```
== Physical Plan ==
*HashAggregate(keys=[value#518], functions=[count(1)])
+- StateStoreSave [value#518], OperatorStateId(<unknown>,0,0), Append, 0
   +- *HashAggregate(keys=[value#518], functions=[merge_count(1)])
      +- StateStoreRestore [value#518], OperatorStateId(<unknown>,0,0)
         +- *HashAggregate(keys=[value#518], functions=[merge_count(1)])
            +- Exchange hashpartitioning(value#518, 5)
               +- *HashAggregate(keys=[value#518], functions=[partial_count(1)])
                  +- *SerializeFromObject [staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, input[0, java.lang.String, true], true) AS value#518]
                     +- *MapElements <function1>, obj#517: java.lang.String
                        +- *DeserializeToObject value#513.toString, obj#516: java.lang.String
                           +- StreamingRelation MemoryStream[value#513], [value#513]
```

- StreamingQuery.explain(extended = false)
```
== Physical Plan ==
*HashAggregate(keys=[value#518], functions=[count(1)])
+- StateStoreSave [value#518], OperatorStateId(...,0,0), Complete, 0
   +- *HashAggregate(keys=[value#518], functions=[merge_count(1)])
      +- StateStoreRestore [value#518], OperatorStateId(...,0,0)
         +- *HashAggregate(keys=[value#518], functions=[merge_count(1)])
            +- Exchange hashpartitioning(value#518, 5)
               +- *HashAggregate(keys=[value#518], functions=[partial_count(1)])
                  +- *SerializeFromObject [staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, input[0, java.lang.String, true], true) AS value#518]
                     +- *MapElements <function1>, obj#517: java.lang.String
                        +- *DeserializeToObject value#543.toString, obj#516: java.lang.String
                           +- LocalTableScan [value#543]
```

- StreamingQuery.explain(extended = true)
```
== Parsed Logical Plan ==
Aggregate [value#518], [value#518, count(1) AS count(1)#524L]
+- SerializeFromObject [staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, input[0, java.lang.String, true], true) AS value#518]
   +- MapElements <function1>, class java.lang.String, [StructField(value,StringType,true)], obj#517: java.lang.String
      +- DeserializeToObject cast(value#543 as string).toString, obj#516: java.lang.String
         +- LocalRelation [value#543]

== Analyzed Logical Plan ==
value: string, count(1): bigint
Aggregate [value#518], [value#518, count(1) AS count(1)#524L]
+- SerializeFromObject [staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, input[0, java.lang.String, true], true) AS value#518]
   +- MapElements <function1>, class java.lang.String, [StructField(value,StringType,true)], obj#517: java.lang.String
      +- DeserializeToObject cast(value#543 as string).toString, obj#516: java.lang.String
         +- LocalRelation [value#543]

== Optimized Logical Plan ==
Aggregate [value#518], [value#518, count(1) AS count(1)#524L]
+- SerializeFromObject [staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, input[0, java.lang.String, true], true) AS value#518]
   +- MapElements <function1>, class java.lang.String, [StructField(value,StringType,true)], obj#517: java.lang.String
      +- DeserializeToObject value#543.toString, obj#516: java.lang.String
         +- LocalRelation [value#543]

== Physical Plan ==
*HashAggregate(keys=[value#518], functions=[count(1)], output=[value#518, count(1)#524L])
+- StateStoreSave [value#518], OperatorStateId(...,0,0), Complete, 0
   +- *HashAggregate(keys=[value#518], functions=[merge_count(1)], output=[value#518, count#530L])
      +- StateStoreRestore [value#518], OperatorStateId(...,0,0)
         +- *HashAggregate(keys=[value#518], functions=[merge_count(1)], output=[value#518, count#530L])
            +- Exchange hashpartitioning(value#518, 5)
               +- *HashAggregate(keys=[value#518], functions=[partial_count(1)], output=[value#518, count#530L])
                  +- *SerializeFromObject [staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, input[0, java.lang.String, true], true) AS value#518]
                     +- *MapElements <function1>, obj#517: java.lang.String
                        +- *DeserializeToObject value#543.toString, obj#516: java.lang.String
                           +- LocalTableScan [value#543]
```

## How was this patch tested?

The updated unit test.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16934 from zsxwing/SPARK-19603.
2017-02-15 20:51:33 -08:00
Shixiong Zhu 21b4ba2d6f [SPARK-19599][SS] Clean up HDFSMetadataLog
## What changes were proposed in this pull request?

SPARK-19464 removed support for Hadoop 2.5 and earlier, so we can do some cleanup for HDFSMetadataLog.

This PR includes the following changes:
- ~~Remove the workaround codes for HADOOP-10622.~~ Unfortunately, there is another issue [HADOOP-14084](https://issues.apache.org/jira/browse/HADOOP-14084) that prevents us from removing the workaround codes.
- Remove unnecessary `writer: (T, OutputStream) => Unit` and just call `serialize` directly.
- Remove catching FileNotFoundException.

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16932 from zsxwing/metadata-cleanup.
2017-02-15 16:21:43 -08:00
Takuya UESHIN 865b2fd84c [SPARK-18937][SQL] Timezone support in CSV/JSON parsing
## What changes were proposed in this pull request?

This is a follow-up pr of #16308.

This pr enables timezone support in CSV/JSON parsing.

We should introduce `timeZone` option for CSV/JSON datasources (the default value of the option is session local timezone).

The datasources should use the `timeZone` option to format/parse to write/read timestamp values.
Notice that while reading, if the timestampFormat has the timezone info, the timezone will not be used because we should respect the timezone in the values.

For example, if you have timestamp `"2016-01-01 00:00:00"` in `GMT`, the values written with the default timezone option, which is `"GMT"` because session local timezone is `"GMT"` here, are:

```scala
scala> spark.conf.set("spark.sql.session.timeZone", "GMT")

scala> val df = Seq(new java.sql.Timestamp(1451606400000L)).toDF("ts")
df: org.apache.spark.sql.DataFrame = [ts: timestamp]

scala> df.show()
+-------------------+
|ts                 |
+-------------------+
|2016-01-01 00:00:00|
+-------------------+

scala> df.write.json("/path/to/gmtjson")
```

```sh
$ cat /path/to/gmtjson/part-*
{"ts":"2016-01-01T00:00:00.000Z"}
```

whereas setting the option to `"PST"`, they are:

```scala
scala> df.write.option("timeZone", "PST").json("/path/to/pstjson")
```

```sh
$ cat /path/to/pstjson/part-*
{"ts":"2015-12-31T16:00:00.000-08:00"}
```

We can properly read these files even if the timezone option is wrong because the timestamp values have timezone info:

```scala
scala> val schema = new StructType().add("ts", TimestampType)
schema: org.apache.spark.sql.types.StructType = StructType(StructField(ts,TimestampType,true))

scala> spark.read.schema(schema).json("/path/to/gmtjson").show()
+-------------------+
|ts                 |
+-------------------+
|2016-01-01 00:00:00|
+-------------------+

scala> spark.read.schema(schema).option("timeZone", "PST").json("/path/to/gmtjson").show()
+-------------------+
|ts                 |
+-------------------+
|2016-01-01 00:00:00|
+-------------------+
```

And even if `timezoneFormat` doesn't contain timezone info, we can properly read the values with setting correct timezone option:

```scala
scala> df.write.option("timestampFormat", "yyyy-MM-dd'T'HH:mm:ss").option("timeZone", "JST").json("/path/to/jstjson")
```

```sh
$ cat /path/to/jstjson/part-*
{"ts":"2016-01-01T09:00:00"}
```

```scala
// wrong result
scala> spark.read.schema(schema).option("timestampFormat", "yyyy-MM-dd'T'HH:mm:ss").json("/path/to/jstjson").show()
+-------------------+
|ts                 |
+-------------------+
|2016-01-01 09:00:00|
+-------------------+

// correct result
scala> spark.read.schema(schema).option("timestampFormat", "yyyy-MM-dd'T'HH:mm:ss").option("timeZone", "JST").json("/path/to/jstjson").show()
+-------------------+
|ts                 |
+-------------------+
|2016-01-01 00:00:00|
+-------------------+
```

This pr also makes `JsonToStruct` and `StructToJson` `TimeZoneAwareExpression` to be able to evaluate values with timezone option.

## How was this patch tested?

Existing tests and added some tests.

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #16750 from ueshin/issues/SPARK-18937.
2017-02-15 13:26:34 -08:00
windpiger 6a9a85b84d [SPARK-19329][SQL] Reading from or writing to a datasource table with a non pre-existing location should succeed
## What changes were proposed in this pull request?

when we insert data into a datasource table use `sqlText`, and the table has an not exists location,
this will throw an Exception.

example:

```
spark.sql("create table t(a string, b int) using parquet")
spark.sql("alter table t set location '/xx'")
spark.sql("insert into table t select 'c', 1")
```

Exception:
```
com.google.common.util.concurrent.UncheckedExecutionException: org.apache.spark.sql.AnalysisException: Path does not exist: /xx;
at com.google.common.cache.LocalCache$LocalLoadingCache.getUnchecked(LocalCache.java:4814)
at com.google.common.cache.LocalCache$LocalLoadingCache.apply(LocalCache.java:4830)
at org.apache.spark.sql.hive.HiveMetastoreCatalog.lookupRelation(HiveMetastoreCatalog.scala:122)
at org.apache.spark.sql.hive.HiveSessionCatalog.lookupRelation(HiveSessionCatalog.scala:69)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$.org$apache$spark$sql$catalyst$analysis$Analyzer$ResolveRelations$$lookupTableFromCatalog(Analyzer.scala:456)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$$anonfun$apply$8.applyOrElse(Analyzer.scala:465)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$$anonfun$apply$8.applyOrElse(Analyzer.scala:463)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolveOperators$1.apply(LogicalPlan.scala:61)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolveOperators$1.apply(LogicalPlan.scala:61)
at org.apache.spark.sql.catalyst.trees.CurrentOrigin$.withOrigin(TreeNode.scala:70)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.resolveOperators(LogicalPlan.scala:60)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$.apply(Analyzer.scala:463)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$.apply(Analyzer.scala:453)
```

As discussed following comments, we should unify the action when we reading from or writing to a datasource table with a non pre-existing locaiton:

1. reading from a datasource table: return 0 rows
2. writing to a datasource table:  write data successfully

## How was this patch tested?
unit test added

Author: windpiger <songjun@outlook.com>

Closes #16672 from windpiger/insertNotExistLocation.
2017-02-15 13:21:48 -08:00
Dongjoon Hyun 59dc26e378 [SPARK-19607][HOTFIX] Finding QueryExecution that matches provided executionId
## What changes were proposed in this pull request?

#16940 adds a test case which does not stop the spark job. It causes many failures of other test cases.

- https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-sbt-hadoop-2.7/2403/consoleFull
- https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-maven-hadoop-2.7/2600/consoleFull

```
[info]   org.apache.spark.SparkException: Only one SparkContext may be running in this JVM (see SPARK-2243). To ignore this error, set spark.driver.allowMultipleContexts = true. The currently running SparkContext was created at:
```

## How was this patch tested?

Pass the Jenkins test.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #16943 from dongjoon-hyun/SPARK-19607-2.
2017-02-15 21:57:49 +01:00
jiangxingbo 3755da76c3 [SPARK-19331][SQL][TESTS] Improve the test coverage of SQLViewSuite
Move `SQLViewSuite` from `sql/hive` to `sql/core`, so we can test the view supports without hive metastore. Also moved the test cases that specified to hive to `HiveSQLViewSuite`.

Improve the test coverage of SQLViewSuite, cover the following cases:
1. view resolution(possibly a referenced table/view have changed after the view creation);
2. handle a view with user specified column names;
3. improve the test cases for a nested view.

Also added a test case for cyclic view reference, which is a known issue that is not fixed yet.

N/A

Author: jiangxingbo <jiangxb1987@gmail.com>

Closes #16674 from jiangxb1987/view-test.
2017-02-15 10:47:11 -08:00
Felix Cheung 671bc08ed5 [SPARK-19399][SPARKR] Add R coalesce API for DataFrame and Column
## What changes were proposed in this pull request?

Add coalesce on DataFrame for down partitioning without shuffle and coalesce on Column

## How was this patch tested?

manual, unit tests

Author: Felix Cheung <felixcheung_m@hotmail.com>

Closes #16739 from felixcheung/rcoalesce.
2017-02-15 10:45:37 -08:00
Liang-Chi Hsieh acf71c63cd [SPARK-16475][SQL] broadcast hint for SQL queries - disallow space as the delimiter
## What changes were proposed in this pull request?

A follow-up to disallow space as the delimiter in broadcast hint.

## How was this patch tested?

Jenkins test.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #16941 from viirya/disallow-space-delimiter.
2017-02-15 18:48:02 +01:00
Dilip Biswal a8a139820c [SPARK-18872][SQL][TESTS] New test cases for EXISTS subquery (Joins + CTE)
## What changes were proposed in this pull request?

This PR adds the third and final set of tests for EXISTS subquery.

File name                        | Brief description
------------------------| -----------------
exists-cte.sql              |Tests Exist subqueries referencing CTE
exists-joins-and-set-ops.sql|Tests Exists subquery used in Joins (Both when joins occurs in outer and suquery blocks)

DB2 results are attached here as reference :

[exists-cte-db2.txt](https://github.com/apache/spark/files/752091/exists-cte-db2.txt)
[exists-joins-and-set-ops-db2.txt](https://github.com/apache/spark/files/753283/exists-joins-and-set-ops-db2.txt) (updated)

## How was this patch tested?
The test result is compared with the result run from another SQL engine (in this case is IBM DB2). If the result are equivalent, we assume the result is correct.

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #16802 from dilipbiswal/exists-pr3.
2017-02-15 17:34:05 +01:00
Nattavut Sutyanyong 5ad10c5310 [SPARK-18873][SQL][TEST] New test cases for scalar subquery (part 2 of 2) - scalar subquery in predicate context
## What changes were proposed in this pull request?
This PR adds new test cases for scalar subquery in predicate context

## How was this patch tested?
The test result is compared with the result run from another SQL engine (in this case is IBM DB2). If the result are equivalent, we assume the result is correct.

Author: Nattavut Sutyanyong <nsy.can@gmail.com>

Closes #16798 from nsyca/18873-2.
2017-02-15 17:30:55 +01:00
Kevin Yu d22db62785 [SPARK-18871][SQL][TESTS] New test cases for IN/NOT IN subquery 2nd batch
## What changes were proposed in this pull request?

This is 2nd batch of test case for IN/NOT IN subquery.  In this PR, it has these test cases:
`in-limit.sql`
`in-order-by.sql`
`not-in-group-by.sql`

These are the queries and results from running on DB2.
[in-limit DB2 version](https://github.com/apache/spark/files/743267/in-limit.sql.db2.out.txt)
[in-order-by DB2 version](https://github.com/apache/spark/files/743269/in-order-by.sql.db2.txt)
[not-in-group-by DB2 version](https://github.com/apache/spark/files/743271/not-in-group-by.sql.db2.txt)
[output of in-limit.sql DB2](https://github.com/apache/spark/files/743276/in-limit.sql.db2.out.txt)
[output of in-order-by.sql DB2](https://github.com/apache/spark/files/743278/in-order-by.sql.db2.out.txt)
[output of not-in-group-by.sql DB2](https://github.com/apache/spark/files/743279/not-in-group-by.sql.db2.out.txt)

## How was this patch tested?

This pr is adding new test cases.

Author: Kevin Yu <qyu@us.ibm.com>

Closes #16759 from kevinyu98/spark-18871-2.
2017-02-15 17:28:42 +01:00
Zhenhua Wang 601b9c3e68 [SPARK-17076][SQL] Cardinality estimation for join based on basic column statistics
## What changes were proposed in this pull request?

Support cardinality estimation and stats propagation for all join types.

Limitations:
- For inner/outer joins without any equal condition, we estimate it like cartesian product.
- For left semi/anti joins, since we can't apply the heuristics for inner join to it, for now we just propagate the statistics from left side. We should support them when other advanced stats (e.g. histograms) are available in spark.

## How was this patch tested?

Add a new test suite.

Author: Zhenhua Wang <wzh_zju@163.com>
Author: wangzhenhua <wangzhenhua@huawei.com>

Closes #16228 from wzhfy/joinEstimate.
2017-02-15 08:21:51 -08:00
Wenchen Fan 8b75f8c1c9 [SPARK-19587][SQL] bucket sorting columns should not be picked from partition columns
## What changes were proposed in this pull request?

We will throw an exception if bucket columns are part of partition columns, this should also apply to sort columns.

This PR also move the checking logic from `DataFrameWriter` to `PreprocessTableCreation`, which is the central place for checking and normailization.

## How was this patch tested?

updated test.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #16931 from cloud-fan/bucket.
2017-02-15 08:15:03 -08:00
Reynold Xin 733c59ec1e [SPARK-16475][SQL] broadcast hint for SQL queries - follow up
## What changes were proposed in this pull request?
A small update to https://github.com/apache/spark/pull/16925

1. Rename SubstituteHints -> ResolveHints to be more consistent with rest of the rules.
2. Added more documentation in the rule and be more defensive / future proof to skip views as well as CTEs.

## How was this patch tested?
This pull request contains no real logic change and all behavior should be covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #16939 from rxin/SPARK-16475.
2017-02-15 17:10:49 +01:00
Ala Luszczak b55563c17e [SPARK-19607] Finding QueryExecution that matches provided executionId
## What changes were proposed in this pull request?

Implementing a mapping between executionId and corresponding QueryExecution in SQLExecution.

## How was this patch tested?

Adds a unit test.

Author: Ala Luszczak <ala@databricks.com>

Closes #16940 from ala/execution-id.
2017-02-15 17:06:04 +01:00
sureshthalamati f48c5a57d6 [SPARK-19318][SQL] Fix to treat JDBC connection properties specified by the user in case-sensitive manner.
## What changes were proposed in this pull request?
The reason for test failure is that the property “oracle.jdbc.mapDateToTimestamp” set by the test was getting converted into all lower case. Oracle database expects this property in case-sensitive manner.

This test was passing in previous releases because connection properties were sent as user specified for the test case scenario. Fixes to handle all option uniformly in case-insensitive manner, converted the JDBC connection properties also to lower case.

This PR  enhances CaseInsensitiveMap to keep track of input case-sensitive keys , and uses those when creating connection properties that are passed to the JDBC connection.

Alternative approach PR https://github.com/apache/spark/pull/16847  is to pass original input keys to JDBC data source by adding check in the  Data source class and handle case-insensitivity in the JDBC source code.

## How was this patch tested?
Added new test cases to JdbcSuite , and OracleIntegrationSuite. Ran docker integration tests passed on my laptop, all tests passed successfully.

Author: sureshthalamati <suresh.thalamati@gmail.com>

Closes #16891 from sureshthalamati/jdbc_case_senstivity_props_fix-SPARK-19318.
2017-02-14 15:34:12 -08:00
Reynold Xin da7aef7a0e [SPARK-16475][SQL] Broadcast hint for SQL Queries
## What changes were proposed in this pull request?
This pull request introduces a simple hint infrastructure to SQL and implements broadcast join hint using the infrastructure.

The hint syntax looks like the following:
```
SELECT /*+ BROADCAST(t) */ * FROM t
```

For broadcast hint, we accept "BROADCAST", "BROADCASTJOIN", and "MAPJOIN", and a sequence of relation aliases can be specified in the hint. A broadcast hint plan node will be inserted on top of any relation (that is not aliased differently), subquery, or common table expression that match the specified name.

The hint resolution works by recursively traversing down the query plan to find a relation or subquery that matches one of the specified broadcast aliases. The traversal does not go past beyond any existing broadcast hints, subquery aliases. This rule happens before common table expressions.

Note that there was an earlier patch in https://github.com/apache/spark/pull/14426. This is a rewrite of that patch, with different semantics and simpler test cases.

## How was this patch tested?
Added a new unit test suite for the broadcast hint rule (SubstituteHintsSuite) and new test cases for parser change (in PlanParserSuite). Also added end-to-end test case in BroadcastSuite.

Author: Reynold Xin <rxin@databricks.com>
Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #16925 from rxin/SPARK-16475-broadcast-hint.
2017-02-14 14:11:17 -08:00
Xiao Li 457850e6f5 [SPARK-19589][SQL] Removal of SQLGEN files
### What changes were proposed in this pull request?
SQLGen is removed. Thus, the generated files should be removed too.

### How was this patch tested?
N/A

Author: Xiao Li <gatorsmile@gmail.com>

Closes #16921 from gatorsmile/removeSQLGenFiles.
2017-02-14 09:35:08 +01:00
Xin Wu 1ab97310e8 [SPARK-19539][SQL] Block duplicate temp table during creation
## What changes were proposed in this pull request?
Current `CREATE TEMPORARY TABLE ... ` is deprecated and recommend users to use `CREATE TEMPORARY VIEW ...` And it does not support `IF NOT EXISTS `clause. However, if there is an existing temporary view defined, it is possible to unintentionally replace this existing view by issuing `CREATE TEMPORARY TABLE ...`  with the same table/view name.

This PR is to disallow `CREATE TEMPORARY TABLE ...` with an existing view name.
Under the cover, `CREATE TEMPORARY TABLE ...` will be changed to create temporary view, however, passing in a flag `replace=false`, instead of currently `true`. So when creating temporary view under the cover, if there is existing view with the same name, the operation will be blocked.

## How was this patch tested?
New unit test case is added and updated some existing test cases to adapt the new behavior

Author: Xin Wu <xinwu@us.ibm.com>

Closes #16878 from xwu0226/block_duplicate_temp_table.
2017-02-13 19:45:58 -08:00
ouyangxiaochen 6e45b547ce [SPARK-19115][SQL] Supporting Create Table Like Location
What changes were proposed in this pull request?

Support CREATE [EXTERNAL] TABLE LIKE LOCATION... syntax for Hive serde and datasource tables.
In this PR,we follow SparkSQL design rules :

    supporting create table like view or physical table or temporary view with location.
    creating a table with location,this table will be an external table other than managed table.

How was this patch tested?

Add new test cases and update existing test cases

Author: ouyangxiaochen <ou.yangxiaochen@zte.com.cn>

Closes #16868 from ouyangxiaochen/spark19115.
2017-02-13 19:41:44 -08:00
hyukjinkwon 9af8f743b0 [SPARK-19435][SQL] Type coercion between ArrayTypes
## What changes were proposed in this pull request?

This PR proposes to support type coercion between `ArrayType`s where the element types are compatible.

**Before**

```
Seq(Array(1)).toDF("a").selectExpr("greatest(a, array(1D))")
org.apache.spark.sql.AnalysisException: cannot resolve 'greatest(`a`, array(1.0D))' due to data type mismatch: The expressions should all have the same type, got GREATEST(array<int>, array<double>).; line 1 pos 0;

Seq(Array(1)).toDF("a").selectExpr("least(a, array(1D))")
org.apache.spark.sql.AnalysisException: cannot resolve 'least(`a`, array(1.0D))' due to data type mismatch: The expressions should all have the same type, got LEAST(array<int>, array<double>).; line 1 pos 0;

sql("SELECT * FROM values (array(0)), (array(1D)) as data(a)")
org.apache.spark.sql.AnalysisException: incompatible types found in column a for inline table; line 1 pos 14

Seq(Array(1)).toDF("a").union(Seq(Array(1D)).toDF("b"))
org.apache.spark.sql.AnalysisException: Union can only be performed on tables with the compatible column types. ArrayType(DoubleType,false) <> ArrayType(IntegerType,false) at the first column of the second table;;

sql("SELECT IF(1=1, array(1), array(1D))")
org.apache.spark.sql.AnalysisException: cannot resolve '(IF((1 = 1), array(1), array(1.0D)))' due to data type mismatch: differing types in '(IF((1 = 1), array(1), array(1.0D)))' (array<int> and array<double>).; line 1 pos 7;
```

**After**

```scala
Seq(Array(1)).toDF("a").selectExpr("greatest(a, array(1D))")
res5: org.apache.spark.sql.DataFrame = [greatest(a, array(1.0)): array<double>]

Seq(Array(1)).toDF("a").selectExpr("least(a, array(1D))")
res6: org.apache.spark.sql.DataFrame = [least(a, array(1.0)): array<double>]

sql("SELECT * FROM values (array(0)), (array(1D)) as data(a)")
res8: org.apache.spark.sql.DataFrame = [a: array<double>]

Seq(Array(1)).toDF("a").union(Seq(Array(1D)).toDF("b"))
res10: org.apache.spark.sql.Dataset[org.apache.spark.sql.Row] = [a: array<double>]

sql("SELECT IF(1=1, array(1), array(1D))")
res15: org.apache.spark.sql.DataFrame = [(IF((1 = 1), array(1), array(1.0))): array<double>]
```

## How was this patch tested?

Unit tests in `TypeCoercion` and Jenkins tests and

building with scala 2.10

```scala
./dev/change-scala-version.sh 2.10
./build/mvn -Pyarn -Phadoop-2.4 -Dscala-2.10 -DskipTests clean package
```

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16777 from HyukjinKwon/SPARK-19435.
2017-02-13 13:10:57 -08:00
Shixiong Zhu 3dbff9be06 [SPARK-19542][SS] Delete the temp checkpoint if a query is stopped without errors
## What changes were proposed in this pull request?

When a query uses a temp checkpoint dir, it's better to delete it if it's stopped without errors.

## How was this patch tested?

New unit tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16880 from zsxwing/delete-temp-checkpoint.
2017-02-13 11:54:54 -08:00
Ala Luszczak 0417ce8787 [SPARK-19514] Enhancing the test for Range interruption.
Improve the test for SPARK-19514, so that it's clear which stage is being cancelled.

Author: Ala Luszczak <ala@databricks.com>

Closes #16914 from ala/fix-range-test.
2017-02-13 20:07:39 +01:00
hyukjinkwon 4321ff9edd [SPARK-19544][SQL] Improve error message when some column types are compatible and others are not in set operations
## What changes were proposed in this pull request?

This PR proposes to fix the error message when some data types are compatible and others are not in set/union operation.

Currently, the code below:

```scala
Seq((1,("a", 1))).toDF.union(Seq((1L,("a", "b"))).toDF)
```

throws an exception saying `LongType` and `IntegerType` are incompatible types. It should say something about `StructType`s with more readable format as below:

**Before**

```
Union can only be performed on tables with the compatible column types.
LongType <> IntegerType at the first column of the second table;;
```

**After**

```
Union can only be performed on tables with the compatible column types.
struct<_1:string,_2:string> <> struct<_1:string,_2:int> at the second column of the second table;;
```

*I manually inserted a newline in the messages above for readability only in this PR description.

## How was this patch tested?

Unit tests in `AnalysisErrorSuite`, manual tests and build wth Scala 2.10.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16882 from HyukjinKwon/SPARK-19544.
2017-02-13 16:08:31 +01:00
windpiger 04ad822534 [SPARK-19496][SQL] to_date udf to return null when input date is invalid
## What changes were proposed in this pull request?

Currently the udf  `to_date` has different return value with an invalid date input.

```
SELECT to_date('2015-07-22', 'yyyy-dd-MM') ->  return `2016-10-07`
SELECT to_date('2014-31-12')    -> return null
```

As discussed in JIRA [SPARK-19496](https://issues.apache.org/jira/browse/SPARK-19496), we should return null in both situations when the input date is invalid

## How was this patch tested?
unit test added

Author: windpiger <songjun@outlook.com>

Closes #16870 from windpiger/to_date.
2017-02-13 12:25:13 +01:00
windpiger 3881f342b4 [SPARK-19448][SQL] optimize some duplication functions between HiveClientImpl and HiveUtils
## What changes were proposed in this pull request?

There are some duplicate functions between `HiveClientImpl` and `HiveUtils`, we can merge them to one place. such as: `toHiveTable` 、`toHivePartition`、`fromHivePartition`.

And additional modify is change `MetastoreRelation.attributes` to `MetastoreRelation.dataColKeys`
https://github.com/apache/spark/blob/master/sql/hive/src/main/scala/org/apache/spark/sql/hive/MetastoreRelation.scala#L234

## How was this patch tested?
N/A

Author: windpiger <songjun@outlook.com>

Closes #16787 from windpiger/todoInMetaStoreRelation.
2017-02-11 22:21:14 -08:00
Herman van Hovell 226d38840c [SPARK-19548][SQL] Support Hive UDFs which return typed Lists/Maps
## What changes were proposed in this pull request?
This PR adds support for Hive UDFs that return fully typed java Lists or Maps, for example `List<String>` or `Map<String, Integer>`.  It is also allowed to nest these structures, for example `Map<String, List<Integer>>`. Raw collections or collections using wildcards are still not supported, and cannot be supported due to the lack of type information.

## How was this patch tested?
Modified existing tests in `HiveUDFSuite`, and I have added test cases for raw collection and collection using wildcards.

Author: Herman van Hovell <hvanhovell@databricks.com>

Closes #16886 from hvanhovell/SPARK-19548.
2017-02-10 14:47:25 -08:00
Ala Luszczak d785217b79 [SPARK-19549] Allow providing reason for stage/job cancelling
## What changes were proposed in this pull request?

This change add an optional argument to `SparkContext.cancelStage()` and `SparkContext.cancelJob()` functions, which allows the caller to provide exact reason  for the cancellation.

## How was this patch tested?

Adds unit test.

Author: Ala Luszczak <ala@databricks.com>

Closes #16887 from ala/cancel.
2017-02-10 21:10:02 +01:00
Herman van Hovell de8a03e682 [SPARK-19459][SQL] Add Hive datatype (char/varchar) to StructField metadata
## What changes were proposed in this pull request?
Reading from an existing ORC table which contains `char` or `varchar` columns can fail with a `ClassCastException` if the table metadata has been created using Spark. This is caused by the fact that spark internally replaces `char` and `varchar` columns with a `string` column.

This PR fixes this by adding the hive type to the `StructField's` metadata under the `HIVE_TYPE_STRING` key. This is picked up by the `HiveClient` and the ORC reader, see https://github.com/apache/spark/pull/16060 for more details on how the metadata is used.

## How was this patch tested?
Added a regression test to `OrcSourceSuite`.

Author: Herman van Hovell <hvanhovell@databricks.com>

Closes #16804 from hvanhovell/SPARK-19459.
2017-02-10 11:06:57 -08:00
Burak Yavuz d5593f7f57 [SPARK-19543] from_json fails when the input row is empty
## What changes were proposed in this pull request?

Using from_json on a column with an empty string results in: java.util.NoSuchElementException: head of empty list.

This is because `parser.parse(input)` may return `Nil` when `input.trim.isEmpty`

## How was this patch tested?

Regression test in `JsonExpressionsSuite`

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #16881 from brkyvz/json-fix.
2017-02-10 12:55:06 +01:00
jiangxingbo af63c52fd3 [SPARK-19025][SQL] Remove SQL builder for operators
## What changes were proposed in this pull request?

With the new approach of view resolution, we can get rid of SQL generation on view creation, so let's remove SQL builder for operators.

Note that, since all sql generation for operators is defined in one file (org.apache.spark.sql.catalyst.SQLBuilder), it’d be trivial to recover it in the future.

## How was this patch tested?

N/A

Author: jiangxingbo <jiangxb1987@gmail.com>

Closes #16869 from jiangxb1987/SQLBuilder.
2017-02-09 19:35:39 +01:00
Bogdan Raducanu 1af0dee418 [SPARK-19512][SQL] codegen for compare structs fails
## What changes were proposed in this pull request?

Set currentVars to null in GenerateOrdering.genComparisons before genCode is called. genCode ignores INPUT_ROW if currentVars is not null and in genComparisons we want it to use INPUT_ROW.

## How was this patch tested?

Added test with 2 queries in WholeStageCodegenSuite

Author: Bogdan Raducanu <bogdan.rdc@gmail.com>

Closes #16852 from bogdanrdc/SPARK-19512.
2017-02-09 19:15:11 +01:00
Ala Luszczak 4064574d03 [SPARK-19514] Making range interruptible.
## What changes were proposed in this pull request?

Previously range operator could not be interrupted. For example, using DAGScheduler.cancelStage(...) on a query with range might have been ineffective.

This change adds periodic checks of TaskContext.isInterrupted to codegen version, and InterruptibleOperator to non-codegen version.

I benchmarked the performance of codegen version on a sample query `spark.range(1000L * 1000 * 1000 * 10).count()` and there is no measurable difference.

## How was this patch tested?

Adds a unit test.

Author: Ala Luszczak <ala@databricks.com>

Closes #16872 from ala/SPARK-19514b.
2017-02-09 19:07:06 +01:00
Liwei Lin 9d9d67c795 [SPARK-19265][SQL][FOLLOW-UP] Configurable tableRelationCache maximum size
## What changes were proposed in this pull request?

SPARK-19265 had made table relation cache general; this follow-up aims to make `tableRelationCache`'s maximum size configurable.

In order to do sanity-check, this patch also adds a `checkValue()` method to `TypedConfigBuilder`.

## How was this patch tested?

new test case: `test("conf entry: checkValue()")`

Author: Liwei Lin <lwlin7@gmail.com>

Closes #16736 from lw-lin/conf.
2017-02-09 00:48:47 -05:00
Wenchen Fan 50a991264c [SPARK-19359][SQL] renaming partition should not leave useless directories
## What changes were proposed in this pull request?

Hive metastore is not case-preserving and keep partition columns with lower case names. If Spark SQL creates a table with upper-case partition column names using `HiveExternalCatalog`, when we rename partition, it first calls the HiveClient to renamePartition, which will create a new lower case partition path, then Spark SQL renames the lower case path to upper-case.

However, when we rename a nested path, different file systems have different behaviors. e.g. in jenkins, renaming `a=1/b=2` to `A=2/B=2` will success, but leave an empty directory `a=1`. in mac os, the renaming doesn't work as expected and result to `a=1/B=2`.

This PR renames the partition directory recursively from the first partition column in `HiveExternalCatalog`, to be most compatible with different file systems.

## How was this patch tested?

new regression test

Author: Wenchen Fan <wenchen@databricks.com>

Closes #16837 from cloud-fan/partition.
2017-02-09 00:39:22 -05:00
Dilip Biswal 64cae22f7c [SPARK-18872][SQL][TESTS] New test cases for EXISTS subquery (Aggregate, Having, Orderby, Limit)
## What changes were proposed in this pull request?
This PR adds the second set of tests for EXISTS subquery.

File name                        | Brief description
------------------------| -----------------
exists-aggregate.sql              |Tests aggregate expressions in outer query and EXISTS subquery.
exists-having.sql|Tests HAVING clause in subquery.
exists-orderby-limit.sql|Tests EXISTS subquery support with ORDER BY and LIMIT clauses.

DB2 results are attached here as reference :

[exists-aggregate-db2.txt](https://github.com/apache/spark/files/743287/exists-aggregate-db2.txt)
[exists-having-db2.txt](https://github.com/apache/spark/files/743286/exists-having-db2.txt)
[exists-orderby-limit-db2.txt](https://github.com/apache/spark/files/743288/exists-orderby-limit-db2.txt)

##  How the patch was tested.
The test result is compared with the result run from another SQL engine (in this case is IBM DB2). If the result are equivalent, we assume the result is correct.

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #16760 from dilipbiswal/exists-pr2.
2017-02-09 00:31:51 -05:00
gatorsmile 4d4d0de7f6 [SPARK-19279][SQL][FOLLOW-UP] Infer Schema for Hive Serde Tables
### What changes were proposed in this pull request?
`table.schema` is always not empty for partitioned tables, because `table.schema` also contains the partitioned columns, even if the original table does not have any column. This PR is to fix the issue.

### How was this patch tested?
Added a test case

Author: gatorsmile <gatorsmile@gmail.com>

Closes #16848 from gatorsmile/inferHiveSerdeSchema.
2017-02-08 10:11:44 -05:00
Dongjoon Hyun 0077bfcb93
[SPARK-19409][BUILD][TEST-MAVEN] Fix ParquetAvroCompatibilitySuite failure due to test dependency on avro
## What changes were proposed in this pull request?

After using Apache Parquet 1.8.2, `ParquetAvroCompatibilitySuite` fails on **Maven** test. It is because `org.apache.parquet.avro.AvroParquetWriter` in the test code used new `avro 1.8.0` specific class, `LogicalType`. This PR aims to fix the test dependency of `sql/core` module to use avro 1.8.0.

https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-maven-hadoop-2.7/2530/consoleFull

```
ParquetAvroCompatibilitySuite:
*** RUN ABORTED ***
  java.lang.NoClassDefFoundError: org/apache/avro/LogicalType
  at org.apache.parquet.avro.AvroParquetWriter.writeSupport(AvroParquetWriter.java:144)
```

## How was this patch tested?

Pass the existing test with **Maven**.

```
$ build/mvn -Pyarn -Phadoop-2.7 -Pkinesis-asl -Phive -Phive-thriftserver test
...
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 02:07 h
[INFO] Finished at: 2017-02-04T05:41:43+00:00
[INFO] Final Memory: 77M/987M
[INFO] ------------------------------------------------------------------------
```

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #16795 from dongjoon-hyun/SPARK-19409-2.
2017-02-08 12:21:49 +00:00
Sean Owen e8d3fca450
[SPARK-19464][CORE][YARN][TEST-HADOOP2.6] Remove support for Hadoop 2.5 and earlier
## What changes were proposed in this pull request?

- Remove support for Hadoop 2.5 and earlier
- Remove reflection and code constructs only needed to support multiple versions at once
- Update docs to reflect newer versions
- Remove older versions' builds and profiles.

## How was this patch tested?

Existing tests

Author: Sean Owen <sowen@cloudera.com>

Closes #16810 from srowen/SPARK-19464.
2017-02-08 12:20:07 +00:00
windpiger d60dde26f9 [SPARK-19488][SQL] fix csv infer schema when the field is Nan/Inf etc
## What changes were proposed in this pull request?

when csv infer schema, it does not use user defined csvoptions to parse the field, such as `inf`, `-inf` which are should be parsed to DoubleType

this pr add  `options.nanValue`, `options.negativeInf`, `options.positiveIn`  to check if the field is a DoubleType

## How was this patch tested?
unit test added

Author: windpiger <songjun@outlook.com>

Closes #16834 from windpiger/fixinferInfSchemaCsv.
2017-02-08 14:30:28 +08:00
Nattavut Sutyanyong 266c1e7309 [SPARK-18873][SQL][TEST] New test cases for scalar subquery (part 1 of 2) - scalar subquery in SELECT clause
## What changes were proposed in this pull request?
This PR adds new test cases for scalar subquery in SELECT clause.

## How was this patch tested?
The test result is compared with the result run from another SQL engine (in this case is IBM DB2). If the result are equivalent, we assume the result is correct.

Author: Nattavut Sutyanyong <nsy.can@gmail.com>

Closes #16712 from nsyca/18873.
2017-02-07 23:36:34 -05:00
CodingCat d4cd975718 [SPARK-19499][SS] Add more notes in the comments of Sink.addBatch()
## What changes were proposed in this pull request?

addBatch method in Sink trait is supposed to be a synchronous method to coordinate with the fault-tolerance design in StreamingExecution (being different with the compute() method in DStream)

We need to add more notes in the comments of this method to remind the developers

## How was this patch tested?

existing tests

Author: CodingCat <zhunansjtu@gmail.com>

Closes #16840 from CodingCat/SPARK-19499.
2017-02-07 20:25:18 -08:00
Tathagata Das aeb80348dd [SPARK-19413][SS] MapGroupsWithState for arbitrary stateful operations
## What changes were proposed in this pull request?

`mapGroupsWithState` is a new API for arbitrary stateful operations in Structured Streaming, similar to `DStream.mapWithState`

*Requirements*
- Users should be able to specify a function that can do the following
- Access the input row corresponding to a key
- Access the previous state corresponding to a key
- Optionally, update or remove the state
- Output any number of new rows (or none at all)

*Proposed API*
```
// ------------ New methods on KeyValueGroupedDataset ------------
class KeyValueGroupedDataset[K, V] {
	// Scala friendly
	def mapGroupsWithState[S: Encoder, U: Encoder](func: (K, Iterator[V], KeyedState[S]) => U)
        def flatMapGroupsWithState[S: Encode, U: Encoder](func: (K, Iterator[V], KeyedState[S]) => Iterator[U])
	// Java friendly
       def mapGroupsWithState[S, U](func: MapGroupsWithStateFunction[K, V, S, R], stateEncoder: Encoder[S], resultEncoder: Encoder[U])
       def flatMapGroupsWithState[S, U](func: FlatMapGroupsWithStateFunction[K, V, S, R], stateEncoder: Encoder[S], resultEncoder: Encoder[U])
}

// ------------------- New Java-friendly function classes -------------------
public interface MapGroupsWithStateFunction<K, V, S, R> extends Serializable {
  R call(K key, Iterator<V> values, state: KeyedState<S>) throws Exception;
}
public interface FlatMapGroupsWithStateFunction<K, V, S, R> extends Serializable {
  Iterator<R> call(K key, Iterator<V> values, state: KeyedState<S>) throws Exception;
}

// ---------------------- Wrapper class for state data ----------------------
trait State[S] {
	def exists(): Boolean
  	def get(): S 			// throws Exception is state does not exist
	def getOption(): Option[S]
	def update(newState: S): Unit
	def remove(): Unit		// exists() will be false after this
}
```

Key Semantics of the State class
- The state can be null.
- If the state.remove() is called, then state.exists() will return false, and getOption will returm None.
- After that state.update(newState) is called, then state.exists() will return true, and getOption will return Some(...).
- None of the operations are thread-safe. This is to avoid memory barriers.

*Usage*
```
val stateFunc = (word: String, words: Iterator[String, runningCount: KeyedState[Long]) => {
    val newCount = words.size + runningCount.getOption.getOrElse(0L)
    runningCount.update(newCount)
   (word, newCount)
}

dataset					                        // type is Dataset[String]
  .groupByKey[String](w => w)        	                // generates KeyValueGroupedDataset[String, String]
  .mapGroupsWithState[Long, (String, Long)](stateFunc)	// returns Dataset[(String, Long)]
```

## How was this patch tested?
New unit tests.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #16758 from tdas/mapWithState.
2017-02-07 20:21:00 -08:00