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4 commits

Author SHA1 Message Date
Hyukjin Kwon ab76900fed [SPARK-26275][PYTHON][ML] Increases timeout for StreamingLogisticRegressionWithSGDTests.test_training_and_prediction test
## What changes were proposed in this pull request?

Looks this test is flaky

https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/99704/console
https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/99569/console
https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/99644/console
https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/99548/console
https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/99454/console
https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/99609/console

```
======================================================================
FAIL: test_training_and_prediction (pyspark.mllib.tests.test_streaming_algorithms.StreamingLogisticRegressionWithSGDTests)
Test that the model improves on toy data with no. of batches
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/jenkins/workspace/SparkPullRequestBuilder/python/pyspark/mllib/tests/test_streaming_algorithms.py", line 367, in test_training_and_prediction
    self._eventually(condition)
  File "/home/jenkins/workspace/SparkPullRequestBuilder/python/pyspark/mllib/tests/test_streaming_algorithms.py", line 78, in _eventually
    % (timeout, lastValue))
AssertionError: Test failed due to timeout after 30 sec, with last condition returning: Latest errors: 0.67, 0.71, 0.78, 0.7, 0.75, 0.74, 0.73, 0.69, 0.62, 0.71, 0.69, 0.75, 0.72, 0.77, 0.71, 0.74

----------------------------------------------------------------------
Ran 13 tests in 185.051s

FAILED (failures=1, skipped=1)
```

This looks happening after increasing the parallelism in Jenkins to speed up at https://github.com/apache/spark/pull/23111. I am able to reproduce this manually when the resource usage is heavy (with manual decrease of timeout).

## How was this patch tested?

Manually tested by

```
cd python
./run-tests --testnames 'pyspark.mllib.tests.test_streaming_algorithms StreamingLogisticRegressionWithSGDTests.test_training_and_prediction' --python-executables=python
```

Closes #23236 from HyukjinKwon/SPARK-26275.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-06 09:14:46 +08:00
Hyukjin Kwon 518a3d10c8 [SPARK-26033][SPARK-26034][PYTHON][FOLLOW-UP] Small cleanup and deduplication in ml/mllib tests
## What changes were proposed in this pull request?

This PR is a small follow up that puts some logic and functions into smaller scope and make it localized, and deduplicate.

## How was this patch tested?

Manually tested. Jenkins tests as well.

Closes #23200 from HyukjinKwon/followup-SPARK-26034-SPARK-26033.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Bryan Cutler <cutlerb@gmail.com>
2018-12-03 14:03:10 -08:00
hyukjinkwon bbbdaa82a4 [SPARK-26105][PYTHON] Clean unittest2 imports up that were added for Python 2.6 before
## What changes were proposed in this pull request?

Currently, some of PySpark tests sill assume the tests could be ran in Python 2.6 by importing `unittest2`. For instance:

```python
if sys.version_info[:2] <= (2, 6):
    try:
        import unittest2 as unittest
    except ImportError:
        sys.stderr.write('Please install unittest2 to test with Python 2.6 or earlier')
        sys.exit(1)
else:
    import unittest
```

While I am here, I removed some of unused imports and reordered imports per PEP 8.

We officially dropped Python 2.6 support a while ago and started to discuss about Python 2 drop. It's better to remove them out.

## How was this patch tested?

Manually tests, and existing tests via Jenkins.

Closes #23077 from HyukjinKwon/SPARK-26105.

Lead-authored-by: hyukjinkwon <gurwls223@apache.org>
Co-authored-by: Bryan Cutler <cutlerb@gmail.com>
Signed-off-by: hyukjinkwon <gurwls223@apache.org>
2018-11-19 09:22:32 +08:00
Bryan Cutler a2fc48c28c [SPARK-26034][PYTHON][TESTS] Break large mllib/tests.py file into smaller files
## What changes were proposed in this pull request?

This PR breaks down the large mllib/tests.py file that contains all Python MLlib unit tests into several smaller test files to be easier to read and maintain.

The tests are broken down as follows:
```
pyspark
├── __init__.py
...
├── mllib
│   ├── __init__.py
...
│   ├── tests
│   │   ├── __init__.py
│   │   ├── test_algorithms.py
│   │   ├── test_feature.py
│   │   ├── test_linalg.py
│   │   ├── test_stat.py
│   │   ├── test_streaming_algorithms.py
│   │   └── test_util.py
...
├── testing
...
│   ├── mllibutils.py
...
```

## How was this patch tested?

Ran tests manually by module to ensure test count was the same, and ran `python/run-tests --modules=pyspark-mllib` to verify all passing with Python 2.7 and Python 3.6. Also installed scipy to include optional tests in test_linalg.

Closes #23056 from BryanCutler/python-test-breakup-mllib-SPARK-26034.

Authored-by: Bryan Cutler <cutlerb@gmail.com>
Signed-off-by: hyukjinkwon <gurwls223@apache.org>
2018-11-17 00:12:17 +08:00