Dan Crankshaw
37b4afbbf9
Merge branch 'cleanup'
2013-10-30 23:17:50 -07:00
Dan Crankshaw
a0c86c3689
Merge pull request #38 from jegonzal/Documentation
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Improving Documentation
2013-10-30 15:34:39 -07:00
Dan Crankshaw
e1099f4d89
Fixed issue with canonical edge partitioner.
2013-10-30 15:03:21 -07:00
Joey
06adf636c5
Merge pull request #33 from kellrott/master
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Fixing graph/pom.xml
2013-10-29 16:43:46 -07:00
Joseph E. Gonzalez
38ec0baf5c
fixing a typo in the VertexSetRDD docs
2013-10-29 16:27:55 -07:00
Joseph E. Gonzalez
d8c8256e52
merging upstream changes
2013-10-29 16:23:26 -07:00
Joseph E. Gonzalez
08c7b040d6
Documented the VertexSetRDD
2013-10-29 15:03:13 -07:00
Joseph E. Gonzalez
ede329336d
Fixing a scaladoc bug in graph generators.
2013-10-29 14:50:12 -07:00
Joseph E. Gonzalez
15958ca65a
Reindenting documentation.
2013-10-29 14:01:24 -07:00
Joseph E. Gonzalez
d316cad9b1
Documented Graph.appy functions.
2013-10-29 13:58:04 -07:00
Joseph E. Gonzalez
19da8820fc
Minor modifications to documentation.
2013-10-29 11:06:06 -07:00
Joseph E. Gonzalez
77626d1507
Adding collect neighbors and documenting GraphOps.
2013-10-29 11:05:42 -07:00
Joseph E. Gonzalez
942de98433
Making suggested changes.
2013-10-29 10:19:49 -07:00
Joseph E. Gonzalez
d6a902f309
Finished updating connected components to used Pregel like abstraction and created a series of tests in the AnalyticsSuite.
2013-10-28 11:52:26 -07:00
Joseph E. Gonzalez
a2287ae138
Implementing connected components on top of pregel like abstraction.
2013-10-27 10:42:11 -07:00
Joseph E. Gonzalez
6a0fbc0374
Updating the GraphLab API to match the changes made to the Pregel API.
2013-10-26 15:44:19 -07:00
Joseph E. Gonzalez
08024c938c
Adding more documentation to the Pregel API as well as additional functionality including the ability to specify the edge direction along which messages are computed.
2013-10-26 15:42:51 -07:00
Joseph E. Gonzalez
00e73833cc
Fixing a bug in reverse edge direction.
2013-10-26 15:10:30 -07:00
Kyle Ellrott
8236d5dcc4
More changes to the graph/pom.xml to make it match the other subprojects
2013-10-25 15:52:44 -07:00
Kyle Ellrott
d39ac2eb40
Merge https://github.com/amplab/graphx
2013-10-25 13:16:05 -07:00
Kyle Ellrott
59ec6b85d0
Merge branch 'master' of https://github.com/amplab/graphx
2013-10-24 10:29:24 -07:00
Joseph E. Gonzalez
c30624dcbb
Adding dynamic pregel, fixing bugs in PageRank, and adding basic analytics unit tests.
2013-10-23 00:25:45 -07:00
Joseph E. Gonzalez
0bd92ed8d0
Fixing a bug in pregel where the initial vertex-program results are lost.
2013-10-22 19:10:51 -07:00
Joseph E. Gonzalez
be8269af07
Merge branch 'VertexSetRDD_Tests' into AnalyticsCleanup
2013-10-22 15:03:49 -07:00
Joseph E. Gonzalez
e3eb03d5b5
Starting analytics test suite.
2013-10-22 15:03:16 -07:00
Joseph E. Gonzalez
ba5c75692a
Updating analytics to reflect changes in the pregel interface and moving degree information into the edge attribute.
2013-10-22 15:03:00 -07:00
Joseph E. Gonzalez
46b195253e
Adding some additional graph generators to support unit testing of the analytics package.
2013-10-22 15:01:49 -07:00
Joseph E. Gonzalez
14a3329a11
Changing the Pregel interface slightly to better support type inference.
2013-10-22 15:01:20 -07:00
Kyle Ellrott
73bf8587e2
Fixing graph/pom.xml
2013-10-21 15:13:31 -07:00
Joseph E. Gonzalez
ebdbedc3e9
Documenting VertexSetRDD and added some testing code for VertexSetRDD
2013-10-19 01:26:08 -07:00
Joseph E. Gonzalez
dbc8c9868a
Fixing bug in VertexSetRDD that breaks Graph tests.
2013-10-18 23:44:06 -07:00
Reynold Xin
9cf43cfeb7
Merge pull request #28 from jegonzal/VertexSetRDD
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Refactoring IndexedRDD to VertexSetRDD.
2013-10-18 22:07:21 -07:00
Ankur Dave
2d3603930e
Add a unit test for GraphOps.joinVertices
2013-10-18 19:46:13 -07:00
Ankur Dave
d15db10831
Add a unit test for Graph.mapEdges
2013-10-18 19:46:13 -07:00
Ankur Dave
d429f015c0
Update GraphSuite aggregateNeighbors test
2013-10-18 19:46:13 -07:00
Joseph E. Gonzalez
5d01ebca3c
Specializing IndexedRDD as VertexSetRDD.
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1) This allows the index map to be optimized for Vids
2) This makes the code more readable
2) The Graph API can now return VertexSetRDDs from operations that produce results for vertices
2013-10-18 19:03:59 -07:00
Joseph E. Gonzalez
bb58aa5330
Added some stub code to address the case where a vertex could occur multiple times in the vertex table or where a vertex in the edge list may not appear in the vertex table.
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Moving IndexedRDD into the graphx source tree and removing dependencies in /core.
2013-10-18 18:15:32 -07:00
Ankur Dave
36a902e52d
Revert accidental removal of code in 3a40a5e
2013-10-18 16:19:40 -07:00
Dan Crankshaw
3a40a5eb30
Added some documentation.
2013-10-18 15:11:21 -07:00
Joseph E. Gonzalez
3f3d28c73f
Switching from Seq to IndexedSeq
2013-10-17 19:55:36 -07:00
Joseph E. Gonzalez
9a03c5fe28
This commit accomplishes three goals:
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1) Further simplification of the IndexedRDD operations (eliminating some)
2) Aggressive reuse of HashMaps
3) Pipelining join operations within indexedrdd
2013-10-17 19:01:48 -07:00
Ankur Dave
bf19aac2b7
Use ArrayBuilder instead of ArrayBuffer
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ArrayBuilder is specialized for holding primitive VD types.
2013-10-17 13:19:00 -07:00
Ankur Dave
2282d27cf1
Cache msgsByPartition
2013-10-16 23:56:15 -07:00
Ankur Dave
bc234bf0e1
Split vTableReplicated into two RDDs
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Previously, (vTableReplicated: IndexedRDD[Pid, VertexHashMap[VD]])
stored one hashmap per partition, taking Vid directly to VD.
To take advantage of rxin's new hashmaps (see
rxin/incubator-spark@32a79d6d13 ), this
commit splits that data structure into two RDDs:
(vTableReplicationMap: IndexedRDD[Pid, VertexIdToIndexMap]) stores a map
per partition from vertex ID to the index where that vertex's attribute
is stored. This index refers to an array in the same partition in
vTableReplicatedValues.
(vTableReplicatedValues: IndexedRDD[Pid, Array[VD]]) stores the vertex
data and is arranged as described above.
2013-10-16 19:22:23 -07:00
Ankur Dave
af8e461841
Set serialization properties in GraphSuite
2013-10-16 19:21:24 -07:00
Joseph E. Gonzalez
57ac9073ae
Introducing unique indexedrdd and adding numerous specialized joins
2013-10-16 04:08:22 -07:00
Joseph E. Gonzalez
59700c0c2a
switched to more efficienct implementation of reduce by key
2013-10-16 00:18:37 -07:00
Joseph E. Gonzalez
9058f261fe
Addressing issue where statistics are not computed correctly
2013-10-15 17:39:09 -07:00
Joseph E. Gonzalez
194bb03d16
Resolved closure capture issues by addressing capture through implicit variables.
2013-10-15 15:10:41 -07:00
Joseph E. Gonzalez
7241cf1632
Updating unit tests.
2013-10-15 14:18:03 -07:00
