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10 commits

Author SHA1 Message Date
HyukjinKwon 3959f0d987 [SPARK-33250][PYTHON][DOCS] Migration to NumPy documentation style in SQL (pyspark.sql.*)
### What changes were proposed in this pull request?

This PR proposes to migrate to [NumPy documentation style](https://numpydoc.readthedocs.io/en/latest/format.html), see also SPARK-33243.
While I am migrating, I also fixed some Python type hints accordingly.

### Why are the changes needed?

For better documentation as text itself, and generated HTMLs

### Does this PR introduce _any_ user-facing change?

Yes, they will see a better format of HTMLs, and better text format. See SPARK-33243.

### How was this patch tested?

Manually tested via running `./dev/lint-python`.

Closes #30181 from HyukjinKwon/SPARK-33250.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-11-03 10:00:49 +09:00
zero323 72da6f86cf [SPARK-33002][PYTHON] Remove non-API annotations
### What changes were proposed in this pull request?

This PR:

- removes annotations for modules which are not part of the public API.
- removes `__init__.pyi` files, if no annotations, beyond exports, are present.

### Why are the changes needed?

Primarily to reduce maintenance overhead and as requested in the comments to https://github.com/apache/spark/pull/29591

### Does this PR introduce _any_ user-facing change?

No

### How was this patch tested?

Existing tests and additional MyPy checks:

```
mypy --no-incremental --config python/mypy.ini python/pyspark
MYPYPATH=python/ mypy --no-incremental --config python/mypy.ini examples/src/main/python/ml examples/src/main/python/sql examples/src/main/python/sql/streaming
```

Closes #29879 from zero323/SPARK-33002.

Authored-by: zero323 <mszymkiewicz@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-10-07 19:53:59 +09:00
zero323 31a16fbb40 [SPARK-32714][PYTHON] Initial pyspark-stubs port
### What changes were proposed in this pull request?

This PR proposes migration of [`pyspark-stubs`](https://github.com/zero323/pyspark-stubs) into Spark codebase.

### Why are the changes needed?

### Does this PR introduce _any_ user-facing change?

Yes. This PR adds type annotations directly to Spark source.

This can impact interaction with development tools for users, which haven't used `pyspark-stubs`.

### How was this patch tested?

- [x] MyPy tests of the PySpark source
    ```
    mypy --no-incremental --config python/mypy.ini python/pyspark
    ```
- [x] MyPy tests of Spark examples
    ```
   MYPYPATH=python/ mypy --no-incremental --config python/mypy.ini examples/src/main/python/ml examples/src/main/python/sql examples/src/main/python/sql/streaming
    ```
- [x] Existing Flake8 linter

- [x] Existing unit tests

Tested against:

- `mypy==0.790+dev.e959952d9001e9713d329a2f9b196705b028f894`
- `mypy==0.782`

Closes #29591 from zero323/SPARK-32681.

Authored-by: zero323 <mszymkiewicz@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-09-24 14:15:36 +09:00
Fokko Driesprong 9fcf0ea718 [SPARK-32319][PYSPARK] Disallow the use of unused imports
Disallow the use of unused imports:

- Unnecessary increases the memory footprint of the application
- Removes the imports that are required for the examples in the docstring from the file-scope to the example itself. This keeps the files itself clean, and gives a more complete example as it also includes the imports :)

```
fokkodriesprongFan spark % flake8 python | grep -i "imported but unused"
python/pyspark/cloudpickle.py:46:1: F401 'functools.partial' imported but unused
python/pyspark/cloudpickle.py:55:1: F401 'traceback' imported but unused
python/pyspark/heapq3.py:868:5: F401 '_heapq.*' imported but unused
python/pyspark/__init__.py:61:1: F401 'pyspark.version.__version__' imported but unused
python/pyspark/__init__.py:62:1: F401 'pyspark._globals._NoValue' imported but unused
python/pyspark/__init__.py:115:1: F401 'pyspark.sql.SQLContext' imported but unused
python/pyspark/__init__.py:115:1: F401 'pyspark.sql.HiveContext' imported but unused
python/pyspark/__init__.py:115:1: F401 'pyspark.sql.Row' imported but unused
python/pyspark/rdd.py:21:1: F401 're' imported but unused
python/pyspark/rdd.py:29:1: F401 'tempfile.NamedTemporaryFile' imported but unused
python/pyspark/mllib/regression.py:26:1: F401 'pyspark.mllib.linalg.SparseVector' imported but unused
python/pyspark/mllib/clustering.py:28:1: F401 'pyspark.mllib.linalg.SparseVector' imported but unused
python/pyspark/mllib/clustering.py:28:1: F401 'pyspark.mllib.linalg.DenseVector' imported but unused
python/pyspark/mllib/classification.py:26:1: F401 'pyspark.mllib.linalg.SparseVector' imported but unused
python/pyspark/mllib/feature.py:28:1: F401 'pyspark.mllib.linalg.DenseVector' imported but unused
python/pyspark/mllib/feature.py:28:1: F401 'pyspark.mllib.linalg.SparseVector' imported but unused
python/pyspark/mllib/feature.py:30:1: F401 'pyspark.mllib.regression.LabeledPoint' imported but unused
python/pyspark/mllib/tests/test_linalg.py:18:1: F401 'sys' imported but unused
python/pyspark/mllib/tests/test_linalg.py:642:5: F401 'pyspark.mllib.tests.test_linalg.*' imported but unused
python/pyspark/mllib/tests/test_feature.py:21:1: F401 'numpy.random' imported but unused
python/pyspark/mllib/tests/test_feature.py:21:1: F401 'numpy.exp' imported but unused
python/pyspark/mllib/tests/test_feature.py:23:1: F401 'pyspark.mllib.linalg.Vector' imported but unused
python/pyspark/mllib/tests/test_feature.py:23:1: F401 'pyspark.mllib.linalg.VectorUDT' imported but unused
python/pyspark/mllib/tests/test_feature.py:185:5: F401 'pyspark.mllib.tests.test_feature.*' imported but unused
python/pyspark/mllib/tests/test_util.py:97:5: F401 'pyspark.mllib.tests.test_util.*' imported but unused
python/pyspark/mllib/tests/test_stat.py:23:1: F401 'pyspark.mllib.linalg.Vector' imported but unused
python/pyspark/mllib/tests/test_stat.py:23:1: F401 'pyspark.mllib.linalg.SparseVector' imported but unused
python/pyspark/mllib/tests/test_stat.py:23:1: F401 'pyspark.mllib.linalg.DenseVector' imported but unused
python/pyspark/mllib/tests/test_stat.py:23:1: F401 'pyspark.mllib.linalg.VectorUDT' imported but unused
python/pyspark/mllib/tests/test_stat.py:23:1: F401 'pyspark.mllib.linalg._convert_to_vector' imported but unused
python/pyspark/mllib/tests/test_stat.py:23:1: F401 'pyspark.mllib.linalg.DenseMatrix' imported but unused
python/pyspark/mllib/tests/test_stat.py:23:1: F401 'pyspark.mllib.linalg.SparseMatrix' imported but unused
python/pyspark/mllib/tests/test_stat.py:23:1: F401 'pyspark.mllib.linalg.MatrixUDT' imported but unused
python/pyspark/mllib/tests/test_stat.py:181:5: F401 'pyspark.mllib.tests.test_stat.*' imported but unused
python/pyspark/mllib/tests/test_streaming_algorithms.py:18:1: F401 'time.time' imported but unused
python/pyspark/mllib/tests/test_streaming_algorithms.py:18:1: F401 'time.sleep' imported but unused
python/pyspark/mllib/tests/test_streaming_algorithms.py:470:5: F401 'pyspark.mllib.tests.test_streaming_algorithms.*' imported but unused
python/pyspark/mllib/tests/test_algorithms.py:295:5: F401 'pyspark.mllib.tests.test_algorithms.*' imported but unused
python/pyspark/tests/test_serializers.py:90:13: F401 'xmlrunner' imported but unused
python/pyspark/tests/test_rdd.py:21:1: F401 'sys' imported but unused
python/pyspark/tests/test_rdd.py:29:1: F401 'pyspark.resource.ResourceProfile' imported but unused
python/pyspark/tests/test_rdd.py:885:5: F401 'pyspark.tests.test_rdd.*' imported but unused
python/pyspark/tests/test_readwrite.py:19:1: F401 'sys' imported but unused
python/pyspark/tests/test_readwrite.py:22:1: F401 'array.array' imported but unused
python/pyspark/tests/test_readwrite.py:309:5: F401 'pyspark.tests.test_readwrite.*' imported but unused
python/pyspark/tests/test_join.py:62:5: F401 'pyspark.tests.test_join.*' imported but unused
python/pyspark/tests/test_taskcontext.py:19:1: F401 'shutil' imported but unused
python/pyspark/tests/test_taskcontext.py:325:5: F401 'pyspark.tests.test_taskcontext.*' imported but unused
python/pyspark/tests/test_conf.py:36:5: F401 'pyspark.tests.test_conf.*' imported but unused
python/pyspark/tests/test_broadcast.py:148:5: F401 'pyspark.tests.test_broadcast.*' imported but unused
python/pyspark/tests/test_daemon.py:76:5: F401 'pyspark.tests.test_daemon.*' imported but unused
python/pyspark/tests/test_util.py:77:5: F401 'pyspark.tests.test_util.*' imported but unused
python/pyspark/tests/test_pin_thread.py:19:1: F401 'random' imported but unused
python/pyspark/tests/test_pin_thread.py:149:5: F401 'pyspark.tests.test_pin_thread.*' imported but unused
python/pyspark/tests/test_worker.py:19:1: F401 'sys' imported but unused
python/pyspark/tests/test_worker.py:26:5: F401 'resource' imported but unused
python/pyspark/tests/test_worker.py:203:5: F401 'pyspark.tests.test_worker.*' imported but unused
python/pyspark/tests/test_profiler.py:101:5: F401 'pyspark.tests.test_profiler.*' imported but unused
python/pyspark/tests/test_shuffle.py:18:1: F401 'sys' imported but unused
python/pyspark/tests/test_shuffle.py:171:5: F401 'pyspark.tests.test_shuffle.*' imported but unused
python/pyspark/tests/test_rddbarrier.py:43:5: F401 'pyspark.tests.test_rddbarrier.*' imported but unused
python/pyspark/tests/test_context.py:129:13: F401 'userlibrary.UserClass' imported but unused
python/pyspark/tests/test_context.py:140:13: F401 'userlib.UserClass' imported but unused
python/pyspark/tests/test_context.py:310:5: F401 'pyspark.tests.test_context.*' imported but unused
python/pyspark/tests/test_appsubmit.py:241:5: F401 'pyspark.tests.test_appsubmit.*' imported but unused
python/pyspark/streaming/dstream.py:18:1: F401 'sys' imported but unused
python/pyspark/streaming/tests/test_dstream.py:27:1: F401 'pyspark.RDD' imported but unused
python/pyspark/streaming/tests/test_dstream.py:647:5: F401 'pyspark.streaming.tests.test_dstream.*' imported but unused
python/pyspark/streaming/tests/test_kinesis.py:83:5: F401 'pyspark.streaming.tests.test_kinesis.*' imported but unused
python/pyspark/streaming/tests/test_listener.py:152:5: F401 'pyspark.streaming.tests.test_listener.*' imported but unused
python/pyspark/streaming/tests/test_context.py:178:5: F401 'pyspark.streaming.tests.test_context.*' imported but unused
python/pyspark/testing/utils.py:30:5: F401 'scipy.sparse' imported but unused
python/pyspark/testing/utils.py:36:5: F401 'numpy as np' imported but unused
python/pyspark/ml/regression.py:25:1: F401 'pyspark.ml.tree._TreeEnsembleParams' imported but unused
python/pyspark/ml/regression.py:25:1: F401 'pyspark.ml.tree._HasVarianceImpurity' imported but unused
python/pyspark/ml/regression.py:29:1: F401 'pyspark.ml.wrapper.JavaParams' imported but unused
python/pyspark/ml/util.py:19:1: F401 'sys' imported but unused
python/pyspark/ml/__init__.py:25:1: F401 'pyspark.ml.pipeline' imported but unused
python/pyspark/ml/pipeline.py:18:1: F401 'sys' imported but unused
python/pyspark/ml/stat.py:22:1: F401 'pyspark.ml.linalg.DenseMatrix' imported but unused
python/pyspark/ml/stat.py:22:1: F401 'pyspark.ml.linalg.Vectors' imported but unused
python/pyspark/ml/tests/test_training_summary.py:18:1: F401 'sys' imported but unused
python/pyspark/ml/tests/test_training_summary.py:364:5: F401 'pyspark.ml.tests.test_training_summary.*' imported but unused
python/pyspark/ml/tests/test_linalg.py:381:5: F401 'pyspark.ml.tests.test_linalg.*' imported but unused
python/pyspark/ml/tests/test_tuning.py:427:9: F401 'pyspark.sql.functions as F' imported but unused
python/pyspark/ml/tests/test_tuning.py:757:5: F401 'pyspark.ml.tests.test_tuning.*' imported but unused
python/pyspark/ml/tests/test_wrapper.py:120:5: F401 'pyspark.ml.tests.test_wrapper.*' imported but unused
python/pyspark/ml/tests/test_feature.py:19:1: F401 'sys' imported but unused
python/pyspark/ml/tests/test_feature.py:304:5: F401 'pyspark.ml.tests.test_feature.*' imported but unused
python/pyspark/ml/tests/test_image.py:19:1: F401 'py4j' imported but unused
python/pyspark/ml/tests/test_image.py:22:1: F401 'pyspark.testing.mlutils.PySparkTestCase' imported but unused
python/pyspark/ml/tests/test_image.py:71:5: F401 'pyspark.ml.tests.test_image.*' imported but unused
python/pyspark/ml/tests/test_persistence.py:456:5: F401 'pyspark.ml.tests.test_persistence.*' imported but unused
python/pyspark/ml/tests/test_evaluation.py:56:5: F401 'pyspark.ml.tests.test_evaluation.*' imported but unused
python/pyspark/ml/tests/test_stat.py:43:5: F401 'pyspark.ml.tests.test_stat.*' imported but unused
python/pyspark/ml/tests/test_base.py:70:5: F401 'pyspark.ml.tests.test_base.*' imported but unused
python/pyspark/ml/tests/test_param.py:20:1: F401 'sys' imported but unused
python/pyspark/ml/tests/test_param.py:375:5: F401 'pyspark.ml.tests.test_param.*' imported but unused
python/pyspark/ml/tests/test_pipeline.py:62:5: F401 'pyspark.ml.tests.test_pipeline.*' imported but unused
python/pyspark/ml/tests/test_algorithms.py:333:5: F401 'pyspark.ml.tests.test_algorithms.*' imported but unused
python/pyspark/ml/param/__init__.py:18:1: F401 'sys' imported but unused
python/pyspark/resource/tests/test_resources.py:17:1: F401 'random' imported but unused
python/pyspark/resource/tests/test_resources.py:20:1: F401 'pyspark.resource.ResourceProfile' imported but unused
python/pyspark/resource/tests/test_resources.py:75:5: F401 'pyspark.resource.tests.test_resources.*' imported but unused
python/pyspark/sql/functions.py:32:1: F401 'pyspark.sql.udf.UserDefinedFunction' imported but unused
python/pyspark/sql/functions.py:34:1: F401 'pyspark.sql.pandas.functions.pandas_udf' imported but unused
python/pyspark/sql/session.py:30:1: F401 'pyspark.sql.types.Row' imported but unused
python/pyspark/sql/session.py:30:1: F401 'pyspark.sql.types.StringType' imported but unused
python/pyspark/sql/readwriter.py:1084:5: F401 'pyspark.sql.Row' imported but unused
python/pyspark/sql/context.py:26:1: F401 'pyspark.sql.types.IntegerType' imported but unused
python/pyspark/sql/context.py:26:1: F401 'pyspark.sql.types.Row' imported but unused
python/pyspark/sql/context.py:26:1: F401 'pyspark.sql.types.StringType' imported but unused
python/pyspark/sql/context.py:27:1: F401 'pyspark.sql.udf.UDFRegistration' imported but unused
python/pyspark/sql/streaming.py:1212:5: F401 'pyspark.sql.Row' imported but unused
python/pyspark/sql/tests/test_utils.py:55:5: F401 'pyspark.sql.tests.test_utils.*' imported but unused
python/pyspark/sql/tests/test_pandas_map.py:18:1: F401 'sys' imported but unused
python/pyspark/sql/tests/test_pandas_map.py:22:1: F401 'pyspark.sql.functions.pandas_udf' imported but unused
python/pyspark/sql/tests/test_pandas_map.py:22:1: F401 'pyspark.sql.functions.PandasUDFType' imported but unused
python/pyspark/sql/tests/test_pandas_map.py:119:5: F401 'pyspark.sql.tests.test_pandas_map.*' imported but unused
python/pyspark/sql/tests/test_catalog.py:193:5: F401 'pyspark.sql.tests.test_catalog.*' imported but unused
python/pyspark/sql/tests/test_group.py:39:5: F401 'pyspark.sql.tests.test_group.*' imported but unused
python/pyspark/sql/tests/test_session.py:361:5: F401 'pyspark.sql.tests.test_session.*' imported but unused
python/pyspark/sql/tests/test_conf.py:49:5: F401 'pyspark.sql.tests.test_conf.*' imported but unused
python/pyspark/sql/tests/test_pandas_cogrouped_map.py:19:1: F401 'sys' imported but unused
python/pyspark/sql/tests/test_pandas_cogrouped_map.py:21:1: F401 'pyspark.sql.functions.sum' imported but unused
python/pyspark/sql/tests/test_pandas_cogrouped_map.py:21:1: F401 'pyspark.sql.functions.PandasUDFType' imported but unused
python/pyspark/sql/tests/test_pandas_cogrouped_map.py:29:5: F401 'pandas.util.testing.assert_series_equal' imported but unused
python/pyspark/sql/tests/test_pandas_cogrouped_map.py:32:5: F401 'pyarrow as pa' imported but unused
python/pyspark/sql/tests/test_pandas_cogrouped_map.py:248:5: F401 'pyspark.sql.tests.test_pandas_cogrouped_map.*' imported but unused
python/pyspark/sql/tests/test_udf.py:24:1: F401 'py4j' imported but unused
python/pyspark/sql/tests/test_pandas_udf_typehints.py:246:5: F401 'pyspark.sql.tests.test_pandas_udf_typehints.*' imported but unused
python/pyspark/sql/tests/test_functions.py:19:1: F401 'sys' imported but unused
python/pyspark/sql/tests/test_functions.py:362:9: F401 'pyspark.sql.functions.exists' imported but unused
python/pyspark/sql/tests/test_functions.py:387:5: F401 'pyspark.sql.tests.test_functions.*' imported but unused
python/pyspark/sql/tests/test_pandas_udf_scalar.py:21:1: F401 'sys' imported but unused
python/pyspark/sql/tests/test_pandas_udf_scalar.py:45:5: F401 'pyarrow as pa' imported but unused
python/pyspark/sql/tests/test_pandas_udf_window.py:355:5: F401 'pyspark.sql.tests.test_pandas_udf_window.*' imported but unused
python/pyspark/sql/tests/test_arrow.py:38:5: F401 'pyarrow as pa' imported but unused
python/pyspark/sql/tests/test_pandas_grouped_map.py:20:1: F401 'sys' imported but unused
python/pyspark/sql/tests/test_pandas_grouped_map.py:38:5: F401 'pyarrow as pa' imported but unused
python/pyspark/sql/tests/test_dataframe.py:382:9: F401 'pyspark.sql.DataFrame' imported but unused
python/pyspark/sql/avro/functions.py:125:5: F401 'pyspark.sql.Row' imported but unused
python/pyspark/sql/pandas/functions.py:19:1: F401 'sys' imported but unused
```

After:
```
fokkodriesprongFan spark % flake8 python | grep -i "imported but unused"
fokkodriesprongFan spark %
```

### What changes were proposed in this pull request?

Removing unused imports from the Python files to keep everything nice and tidy.

### Why are the changes needed?

Cleaning up of the imports that aren't used, and suppressing the imports that are used as references to other modules, preserving backward compatibility.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Adding the rule to the existing Flake8 checks.

Closes #29121 from Fokko/SPARK-32319.

Authored-by: Fokko Driesprong <fokko@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-08-08 08:51:57 -07:00
HyukjinKwon 4ad9bfd53b [SPARK-32138] Drop Python 2.7, 3.4 and 3.5
### What changes were proposed in this pull request?

This PR aims to drop Python 2.7, 3.4 and 3.5.

Roughly speaking, it removes all the widely known Python 2 compatibility workarounds such as `sys.version` comparison, `__future__`. Also, it removes the Python 2 dedicated codes such as `ArrayConstructor` in Spark.

### Why are the changes needed?

 1. Unsupport EOL Python versions
 2. Reduce maintenance overhead and remove a bit of legacy codes and hacks for Python 2.
 3. PyPy2 has a critical bug that causes a flaky test, SPARK-28358 given my testing and investigation.
 4. Users can use Python type hints with Pandas UDFs without thinking about Python version
 5. Users can leverage one latest cloudpickle, https://github.com/apache/spark/pull/28950. With Python 3.8+ it can also leverage C pickle.

### Does this PR introduce _any_ user-facing change?

Yes, users cannot use Python 2.7, 3.4 and 3.5 in the upcoming Spark version.

### How was this patch tested?

Manually tested and also tested in Jenkins.

Closes #28957 from HyukjinKwon/SPARK-32138.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-07-14 11:22:44 +09:00
Gengliang Wang 07593d362f [SPARK-27506][SQL][FOLLOWUP] Use option avroSchema to specify an evolved schema in from_avro
### What changes were proposed in this pull request?

This is a follow-up of https://github.com/apache/spark/pull/26780
In https://github.com/apache/spark/pull/26780, a new Avro data source option `actualSchema` is introduced for setting the original Avro schema in function `from_avro`, while the expected schema is supposed to be set in the parameter `jsonFormatSchema` of `from_avro`.

However, there is another Avro data source option `avroSchema`. It is used for setting the expected schema in readiong and writing.

This PR is to use the option `avroSchema` option for  reading Avro data with an evolved schema and remove the new one `actualSchema`

### Why are the changes needed?

Unify and simplify the Avro data source options.

### Does this PR introduce any user-facing change?

Yes.
To deserialize Avro data with an evolved schema, before changes:
```
from_avro('col, expectedSchema, ("actualSchema" -> actualSchema))
```

After changes:
```
from_avro('col, actualSchema, ("avroSchema" -> expectedSchema))
```

The second parameter is always the actual Avro schema after changes.
### How was this patch tested?

Update the existing tests in https://github.com/apache/spark/pull/26780

Closes #27045 from gengliangwang/renameAvroOption.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-12-30 18:14:21 +09:00
Fokko Driesprong 99ea324b6f [SPARK-27506][SQL] Allow deserialization of Avro data using compatible schemas
Follow up of https://github.com/apache/spark/pull/24405

### What changes were proposed in this pull request?
The current implementation of _from_avro_ and _AvroDataToCatalyst_ doesn't allow doing schema evolution since it requires the deserialization of an Avro record with the exact same schema with which it was serialized.

The proposed change is to add a new option `actualSchema` to allow passing the schema used to serialize the records. This allows using a different compatible schema for reading by passing both schemas to _GenericDatumReader_. If no writer's schema is provided, nothing changes from before.

### Why are the changes needed?
Consider the following example.

```
// schema ID: 1
val schema1 = """
{
    "type": "record",
    "name": "MySchema",
    "fields": [
        {"name": "col1", "type": "int"},
        {"name": "col2", "type": "string"}
     ]
}
"""

// schema ID: 2
val schema2 = """
{
    "type": "record",
    "name": "MySchema",
    "fields": [
        {"name": "col1", "type": "int"},
        {"name": "col2", "type": "string"},
        {"name": "col3", "type": "string", "default": ""}
     ]
}
"""
```

The two schemas are compatible - i.e. you can use `schema2` to deserialize events serialized with `schema1`, in which case there will be the field `col3` with the default value.

Now imagine that you have two dataframes (read from batch or streaming), one with Avro events from schema1 and the other with events from schema2. **We want to combine them into one dataframe** for storing or further processing.

With the current `from_avro` function we can only decode each of them with the corresponding schema:

```
scalaval df1 = ... // Avro events created with schema1
df1: org.apache.spark.sql.DataFrame = [eventBytes: binary]
scalaval decodedDf1 = df1.select(from_avro('eventBytes, schema1) as "decoded")
decodedDf1: org.apache.spark.sql.DataFrame = [decoded: struct<col1: int, col2: string>]

scalaval df2= ... // Avro events created with schema2
df2: org.apache.spark.sql.DataFrame = [eventBytes: binary]
scalaval decodedDf2 = df2.select(from_avro('eventBytes, schema2) as "decoded")
decodedDf2: org.apache.spark.sql.DataFrame = [decoded: struct<col1: int, col2: string, col3: string>]
```

but then `decodedDf1` and `decodedDf2` have different Spark schemas and we can't union them. Instead, with the proposed change we can decode `df1` in the following way:

```
scalaimport scala.collection.JavaConverters._
scalaval decodedDf1 = df1.select(from_avro(data = 'eventBytes, jsonFormatSchema = schema2, options = Map("actualSchema" -> schema1).asJava) as "decoded")
decodedDf1: org.apache.spark.sql.DataFrame = [decoded: struct<col1: int, col2: string, col3: string>]
```

so that both dataframes have the same schemas and can be merged.

### Does this PR introduce any user-facing change?
This PR allows users to pass a new configuration but it doesn't affect current code.

### How was this patch tested?
A new unit test was added.

Closes #26780 from Fokko/SPARK-27506.

Lead-authored-by: Fokko Driesprong <fokko@apache.org>
Co-authored-by: Gianluca Amori <gianluca.amori@gmail.com>
Signed-off-by: Gengliang Wang <gengliang.wang@databricks.com>
2019-12-11 01:26:29 -08:00
Gengliang Wang 48adc91057 [SPARK-28698][SQL] Support user-specified output schema in to_avro
## What changes were proposed in this pull request?

The mapping of Spark schema to Avro schema is many-to-many. (See https://spark.apache.org/docs/latest/sql-data-sources-avro.html#supported-types-for-spark-sql---avro-conversion)
The default schema mapping might not be exactly what users want. For example, by default, a "string" column is always written as "string" Avro type, but users might want to output the column as "enum" Avro type.
With PR https://github.com/apache/spark/pull/21847, Spark supports user-specified schema in the batch writer.
For the function `to_avro`, we should support user-specified output schema as well.

## How was this patch tested?

Unit test.

Closes #25419 from gengliangwang/to_avro.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-08-13 20:52:16 +08:00
Dongjoon Hyun a0d807d5ab [SPARK-26856][PYSPARK][FOLLOWUP] Fix UT failure due to wrong patterns for Kinesis assembly
## What changes were proposed in this pull request?

After [SPARK-26856](https://github.com/apache/spark/pull/23797), `Kinesis` Python UT fails with `Found multiple JARs` exception due to a wrong pattern.

- https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/104171/console
```
Exception: Found multiple JARs:
.../spark-streaming-kinesis-asl-assembly-3.0.0-SNAPSHOT.jar,
.../spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT.jar;
please remove all but one
```

It's because the pattern was changed in a wrong way.

**Original**
```python
kinesis_asl_assembly_dir, "target/scala-*/%s-*.jar" % name_prefix))
kinesis_asl_assembly_dir, "target/%s_*.jar" % name_prefix))
```
**After SPARK-26856**
```python
project_full_path, "target/scala-*/%s*.jar" % jar_name_prefix))
project_full_path, "target/%s*.jar" % jar_name_prefix))
```

The actual kinesis assembly jar files look like the followings.

**SBT Build**
```
-rw-r--r--  1 dongjoon  staff  87459461 Apr  1 19:01 spark-streaming-kinesis-asl-assembly-3.0.0-SNAPSHOT.jar
-rw-r--r--  1 dongjoon  staff       309 Apr  1 18:58 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT-tests.jar
-rw-r--r--  1 dongjoon  staff       309 Apr  1 18:58 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT.jar
```

**MAVEN Build**
```
-rw-r--r--   1 dongjoon  staff   8.6K Apr  1 18:55 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT-sources.jar
-rw-r--r--   1 dongjoon  staff   8.6K Apr  1 18:55 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT-test-sources.jar
-rw-r--r--   1 dongjoon  staff   8.7K Apr  1 18:55 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT-tests.jar
-rw-r--r--   1 dongjoon  staff    21M Apr  1 18:55 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT.jar
```

In addition, after SPARK-26856, the utility function `search_jar` is shared to find `avro` jar files which are identical for both `sbt` and `mvn`. To sum up, The current jar pattern parameter cannot handle both `kinesis` and `avro` jars. This PR splits the single pattern into two patterns.

## How was this patch tested?

Manual. Please note that this will remove only `Found multiple JARs` exception. Kinesis tests need more configurations to run locally.
```
$ build/sbt -Pkinesis-asl test:package streaming-kinesis-asl-assembly/assembly
$ export ENABLE_KINESIS_TESTS=1
$ python/run-tests.py --python-executables python2.7 --module pyspark-streaming
```

Closes #24268 from dongjoon-hyun/SPARK-26856.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-04-02 14:52:56 +09:00
Gabor Somogyi 3729efb4d0 [SPARK-26856][PYSPARK] Python support for from_avro and to_avro APIs
## What changes were proposed in this pull request?

Avro is built-in but external data source module since Spark 2.4 but  `from_avro` and `to_avro` APIs not yet supported in pyspark.

In this PR I've made them available from pyspark.

## How was this patch tested?

Please see the python API examples what I've added.

cd docs/
SKIP_SCALADOC=1 SKIP_RDOC=1 SKIP_SQLDOC=1 jekyll build
Manual webpage check.

Closes #23797 from gaborgsomogyi/SPARK-26856.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-03-11 10:15:07 +09:00