Commit graph

888 commits

Author SHA1 Message Date
Josh Rosen 452690ba1c [SPARK-12001] Allow partially-stopped StreamingContext to be completely stopped
If `StreamingContext.stop()` is interrupted midway through the call, the context will be marked as stopped but certain state will have not been cleaned up. Because `state = STOPPED` will be set, subsequent `stop()` calls will be unable to finish stopping the context, preventing any new StreamingContexts from being created.

This patch addresses this issue by only marking the context as `STOPPED` once the `stop()` has successfully completed which allows `stop()` to be called a second time in order to finish stopping the context in case the original `stop()` call was interrupted.

I discovered this issue by examining logs from a failed Jenkins run in which this race condition occurred in `FailureSuite`, leaking an unstoppable context and causing all subsequent tests to fail.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #9982 from JoshRosen/SPARK-12001.
2015-12-02 13:44:01 -08:00
Tathagata Das 8a75a30495 [SPARK-12087][STREAMING] Create new JobConf for every batch in saveAsHadoopFiles
The JobConf object created in `DStream.saveAsHadoopFiles` is used concurrently in multiple places:
* The JobConf is updated by `RDD.saveAsHadoopFile()` before the job is launched
* The JobConf is serialized as part of the DStream checkpoints.
These concurrent accesses (updating in one thread, while the another thread is serializing it) can lead to concurrentModidicationException in the underlying Java hashmap using in the internal Hadoop Configuration object.

The solution is to create a new JobConf in every batch, that is updated by `RDD.saveAsHadoopFile()`, while the checkpointing serializes the original JobConf.

Tests to be added in #9988 will fail reliably without this patch. Keeping this patch really small to make sure that it can be added to previous branches.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #10088 from tdas/SPARK-12087.
2015-12-01 21:04:52 -08:00
Cheng Lian 69dbe6b40d [SPARK-12046][DOC] Fixes various ScalaDoc/JavaDoc issues
This PR backports PR #10039 to master

Author: Cheng Lian <lian@databricks.com>

Closes #10063 from liancheng/spark-12046.doc-fix.master.
2015-12-01 10:21:31 -08:00
Shixiong Zhu f57e6c9eff [SPARK-12021][STREAMING][TESTS] Fix the potential dead-lock in StreamingListenerSuite
In StreamingListenerSuite."don't call ssc.stop in listener", after the main thread calls `ssc.stop()`,  `StreamingContextStoppingCollector` may call  `ssc.stop()` in the listener bus thread, which is a dead-lock. This PR updated `StreamingContextStoppingCollector` to only call `ssc.stop()` in the first batch to avoid the dead-lock.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10011 from zsxwing/fix-test-deadlock.
2015-11-27 11:50:18 -08:00
Shixiong Zhu d29e2ef4cf [SPARK-11935][PYSPARK] Send the Python exceptions in TransformFunction and TransformFunctionSerializer to Java
The Python exception track in TransformFunction and TransformFunctionSerializer is not sent back to Java. Py4j just throws a very general exception, which is hard to debug.

This PRs adds `getFailure` method to get the failure message in Java side.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9922 from zsxwing/SPARK-11935.
2015-11-25 11:47:21 -08:00
Tathagata Das 2169886883 [SPARK-11979][STREAMING] Empty TrackStateRDD cannot be checkpointed and recovered from checkpoint file
This solves the following exception caused when empty state RDD is checkpointed and recovered. The root cause is that an empty OpenHashMapBasedStateMap cannot be deserialized as the initialCapacity is set to zero.
```
Job aborted due to stage failure: Task 0 in stage 6.0 failed 1 times, most recent failure: Lost task 0.0 in stage 6.0 (TID 20, localhost): java.lang.IllegalArgumentException: requirement failed: Invalid initial capacity
	at scala.Predef$.require(Predef.scala:233)
	at org.apache.spark.streaming.util.OpenHashMapBasedStateMap.<init>(StateMap.scala:96)
	at org.apache.spark.streaming.util.OpenHashMapBasedStateMap.<init>(StateMap.scala:86)
	at org.apache.spark.streaming.util.OpenHashMapBasedStateMap.readObject(StateMap.scala:291)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:606)
	at java.io.ObjectStreamClass.invokeReadObject(ObjectStreamClass.java:1017)
	at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1893)
	at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
	at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
	at java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:1990)
	at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1915)
	at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
	at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
	at java.io.ObjectInputStream.readObject(ObjectInputStream.java:370)
	at org.apache.spark.serializer.JavaDeserializationStream.readObject(JavaSerializer.scala:76)
	at org.apache.spark.serializer.DeserializationStream$$anon$1.getNext(Serializer.scala:181)
	at org.apache.spark.util.NextIterator.hasNext(NextIterator.scala:73)
	at scala.collection.Iterator$$anon$13.hasNext(Iterator.scala:371)
	at scala.collection.Iterator$class.foreach(Iterator.scala:727)
	at scala.collection.AbstractIterator.foreach(Iterator.scala:1157)
	at scala.collection.generic.Growable$class.$plus$plus$eq(Growable.scala:48)
	at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:103)
	at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:47)
	at scala.collection.TraversableOnce$class.to(TraversableOnce.scala:273)
	at scala.collection.AbstractIterator.to(Iterator.scala:1157)
	at scala.collection.TraversableOnce$class.toBuffer(TraversableOnce.scala:265)
	at scala.collection.AbstractIterator.toBuffer(Iterator.scala:1157)
	at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:252)
	at scala.collection.AbstractIterator.toArray(Iterator.scala:1157)
	at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$12.apply(RDD.scala:921)
	at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$12.apply(RDD.scala:921)
	at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
	at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
	at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
	at org.apache.spark.scheduler.Task.run(Task.scala:88)
	at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
	at java.lang.Thread.run(Thread.java:744)
```

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9958 from tdas/SPARK-11979.
2015-11-24 23:13:01 -08:00
Burak Yavuz a5d9887633 [STREAMING][FLAKY-TEST] Catch execution context race condition in FileBasedWriteAheadLog.close()
There is a race condition in `FileBasedWriteAheadLog.close()`, where if delete's of old log files are in progress, the write ahead log may close, and result in a `RejectedExecutionException`. This is okay, and should be handled gracefully.

Example test failures:
https://amplab.cs.berkeley.edu/jenkins/job/Spark-1.6-SBT/AMPLAB_JENKINS_BUILD_PROFILE=hadoop1.0,label=spark-test/95/testReport/junit/org.apache.spark.streaming.util/BatchedWriteAheadLogWithCloseFileAfterWriteSuite/BatchedWriteAheadLog___clean_old_logs/

The reason the test fails is in `afterEach`, `writeAheadLog.close` is called, and there may still be async deletes in flight.

tdas zsxwing

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9953 from brkyvz/flaky-ss.
2015-11-24 20:58:47 -08:00
Tathagata Das b2cecb80ec [SPARK-11845][STREAMING][TEST] Added unit test to verify TrackStateRDD is correctly checkpointed
To make sure that all lineage is correctly truncated for TrackStateRDD when checkpointed.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9831 from tdas/SPARK-11845.
2015-11-19 16:50:08 -08:00
Burak Yavuz 921900fd06 [SPARK-11791] Fix flaky test in BatchedWriteAheadLogSuite
stack trace of failure:
```
org.scalatest.exceptions.TestFailedDueToTimeoutException: The code passed to eventually never returned normally. Attempted 62 times over 1.006322071 seconds. Last failure message:
Argument(s) are different! Wanted:
writeAheadLog.write(
    java.nio.HeapByteBuffer[pos=0 lim=124 cap=124],
    10
);
-> at org.apache.spark.streaming.util.BatchedWriteAheadLogSuite$$anonfun$23$$anonfun$apply$mcV$sp$15.apply(WriteAheadLogSuite.scala:518)
Actual invocation has different arguments:
writeAheadLog.write(
    java.nio.HeapByteBuffer[pos=0 lim=124 cap=124],
    10
);
-> at org.apache.spark.streaming.util.WriteAheadLogSuite$BlockingWriteAheadLog.write(WriteAheadLogSuite.scala:756)
```

I believe the issue was that due to a race condition, the ordering of the events could be messed up in the final ByteBuffer, therefore the comparison fails.

By adding eventually between the requests, we make sure the ordering is preserved. Note that in real life situations, the ordering across threads will not matter.

Another solution would be to implement a custom mockito matcher that sorts and then compares the results, but that kind of sounds like overkill to me. Let me know what you think tdas zsxwing

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9790 from brkyvz/fix-flaky-2.
2015-11-18 16:19:00 -08:00
Tathagata Das a402c92c92 [SPARK-11814][STREAMING] Add better default checkpoint duration
DStream checkpoint interval is by default set at max(10 second, batch interval). That's bad for large batch intervals where the checkpoint interval = batch interval, and RDDs get checkpointed every batch.
This PR is to set the checkpoint interval of trackStateByKey to 10 * batch duration.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9805 from tdas/SPARK-11814.
2015-11-18 16:08:06 -08:00
Josh Rosen 4b11712190 [SPARK-11495] Fix potential socket / file handle leaks that were found via static analysis
The HP Fortify Opens Source Review team (https://www.hpfod.com/open-source-review-project) reported a handful of potential resource leaks that were discovered using their static analysis tool. We should fix the issues identified by their scan.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #9455 from JoshRosen/fix-potential-resource-leaks.
2015-11-18 16:00:35 -08:00
Bryan Cutler 31921e0f0b [SPARK-4557][STREAMING] Spark Streaming foreachRDD Java API method should accept a VoidFunction<...>
Currently streaming foreachRDD Java API uses a function prototype requiring a return value of null.  This PR deprecates the old method and uses VoidFunction to allow for more concise declaration.  Also added VoidFunction2 to Java API in order to use in Streaming methods.  Unit test is added for using foreachRDD with VoidFunction, and changes have been tested with Java 7 and Java 8 using lambdas.

Author: Bryan Cutler <bjcutler@us.ibm.com>

Closes #9488 from BryanCutler/foreachRDD-VoidFunction-SPARK-4557.
2015-11-18 12:09:54 -08:00
tedyu 446738e51f [SPARK-11761] Prevent the call to StreamingContext#stop() in the listener bus's thread
See discussion toward the tail of https://github.com/apache/spark/pull/9723
From zsxwing :
```
The user should not call stop or other long-time work in a listener since it will block the listener thread, and prevent from stopping SparkContext/StreamingContext.

I cannot see an approach since we need to stop the listener bus's thread before stopping SparkContext/StreamingContext totally.
```
Proposed solution is to prevent the call to StreamingContext#stop() in the listener bus's thread.

Author: tedyu <yuzhihong@gmail.com>

Closes #9741 from tedyu/master.
2015-11-17 22:47:53 -08:00
Shixiong Zhu 928d631625 [SPARK-11740][STREAMING] Fix the race condition of two checkpoints in a batch
We will do checkpoint when generating a batch and completing a batch. When the processing time of a batch is greater than the batch interval, checkpointing for completing an old batch may run after checkpointing for generating a new batch. If this happens, checkpoint of an old batch actually has the latest information, so we want to recovery from it. This PR will use the latest checkpoint time as the file name, so that we can always recovery from the latest checkpoint file.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9707 from zsxwing/fix-checkpoint.
2015-11-17 14:48:29 -08:00
Shixiong Zhu bcea0bfda6 [SPARK-11742][STREAMING] Add the failure info to the batch lists
<img width="1365" alt="screen shot 2015-11-13 at 9 57 43 pm" src="https://cloud.githubusercontent.com/assets/1000778/11162322/9b88e204-8a51-11e5-8c57-a44889cab713.png">

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9711 from zsxwing/failure-info.
2015-11-16 15:06:06 -08:00
Daniel Jalova ace0db4714 [SPARK-6328][PYTHON] Python API for StreamingListener
Author: Daniel Jalova <djalova@us.ibm.com>

Closes #9186 from djalova/SPARK-6328.
2015-11-16 11:29:27 -08:00
Burak Yavuz de5e531d33 [SPARK-11731][STREAMING] Enable batching on Driver WriteAheadLog by default
Using batching on the driver for the WriteAheadLog should be an improvement for all environments and use cases. Users will be able to scale to much higher number of receivers with the BatchedWriteAheadLog. Therefore we should turn it on by default, and QA it in the QA period.

I've also added some tests to make sure the default configurations are correct regarding recent additions:
 - batching on by default
 - closeFileAfterWrite off by default
 - parallelRecovery off by default

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9695 from brkyvz/enable-batch-wal.
2015-11-16 11:21:17 -08:00
Gábor Lipták 9461f5ee80 [SPARK-11573] Correct 'reflective access of structural type member meth…
…od should be enabled' Scala warnings

Author: Gábor Lipták <gliptak@gmail.com>

Closes #9550 from gliptak/SPARK-11573.
2015-11-14 12:02:02 +00:00
Tathagata Das e4e46b20f6 [SPARK-11681][STREAMING] Correctly update state timestamp even when state is not updated
Bug: Timestamp is not updated if there is data but the corresponding state is not updated. This is wrong, and timeout is defined as "no data for a while", not "not state update for a while".

Fix: Update timestamp when timestamp when timeout is specified, otherwise no need.
Also refactored the code for better testability and added unit tests.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9648 from tdas/SPARK-11681.
2015-11-12 19:02:49 -08:00
Burak Yavuz 7786f9cc07 [SPARK-11419][STREAMING] Parallel recovery for FileBasedWriteAheadLog + minor recovery tweaks
The support for closing WriteAheadLog files after writes was just merged in. Closing every file after a write is a very expensive operation as it creates many small files on S3. It's not necessary to enable it on HDFS anyway.

However, when you have many small files on S3, recovery takes very long. In addition, files start stacking up pretty quickly, and deletes may not be able to keep up, therefore deletes can also be parallelized.

This PR adds support for the two parallelization steps mentioned above, in addition to a couple more failures I encountered during recovery.

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9373 from brkyvz/par-recovery.
2015-11-12 18:03:23 -08:00
Shixiong Zhu 0f1d00a905 [SPARK-11663][STREAMING] Add Java API for trackStateByKey
TODO
- [x] Add Java API
- [x] Add API tests
- [x] Add a function test

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9636 from zsxwing/java-track.
2015-11-12 17:48:43 -08:00
Shixiong Zhu f0d3b58d91 [SPARK-11290][STREAMING][TEST-MAVEN] Fix the test for maven build
Should not create SparkContext in the constructor of `TrackStateRDDSuite`. This is a follow up PR for #9256 to fix the test for maven build.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9668 from zsxwing/hotfix.
2015-11-12 14:52:03 -08:00
Burak Yavuz 27029bc8f6 [SPARK-11639][STREAMING][FLAKY-TEST] Implement BlockingWriteAheadLog for testing the BatchedWriteAheadLog
Several elements could be drained if the main thread is not fast enough. zsxwing warned me about a similar problem, but missed it here :( Submitting the fix using a waiter.

cc tdas

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9605 from brkyvz/fix-flaky-test.
2015-11-11 11:24:55 -08:00
Tathagata Das 99f5f98861 [SPARK-11290][STREAMING] Basic implementation of trackStateByKey
Current updateStateByKey provides stateful processing in Spark Streaming. It allows the user to maintain per-key state and manage that state using an updateFunction. The updateFunction is called for each key, and it uses new data and existing state of the key, to generate an updated state. However, based on community feedback, we have learnt the following lessons.
* Need for more optimized state management that does not scan every key
* Need to make it easier to implement common use cases - (a) timeout of idle data, (b) returning items other than state

The high level idea that of this PR
* Introduce a new API trackStateByKey that, allows the user to update per-key state, and emit arbitrary records. The new API is necessary as this will have significantly different semantics than the existing updateStateByKey API. This API will have direct support for timeouts.
* Internally, the system will keep the state data as a map/list within the partitions of the state RDDs. The new data RDDs will be partitioned appropriately, and for all the key-value data, it will lookup the map/list in the state RDD partition and create a new list/map of updated state data. The new state RDD partition will be created based on the update data and if necessary, with old data.
Here is the detailed design doc. Please take a look and provide feedback as comments.
https://docs.google.com/document/d/1NoALLyd83zGs1hNGMm0Pc5YOVgiPpMHugGMk6COqxxE/edit#heading=h.ph3w0clkd4em

This is still WIP. Major things left to be done.
- [x] Implement basic functionality of state tracking, with initial RDD and timeouts
- [x] Unit tests for state tracking
- [x] Unit tests for initial RDD and timeout
- [ ] Unit tests for TrackStateRDD
       - [x] state creating, updating, removing
       - [ ] emitting
       - [ ] checkpointing
- [x] Misc unit tests for State, TrackStateSpec, etc.
- [x] Update docs and experimental tags

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9256 from tdas/trackStateByKey.
2015-11-10 23:16:18 -08:00
Tathagata Das 6600786ddd [SPARK-11361][STREAMING] Show scopes of RDD operations inside DStream.foreachRDD and DStream.transform in DAG viz
Currently, when a DStream sets the scope for RDD generated by it, that scope is not allowed to be overridden by the RDD operations. So in case of `DStream.foreachRDD`, all the RDDs generated inside the foreachRDD get the same scope - `foreachRDD  <time>`, as set by the `ForeachDStream`. So it is hard to debug generated RDDs in the RDD DAG viz in the Spark UI.

This patch allows the RDD operations inside `DStream.transform` and `DStream.foreachRDD` to append their own scopes to the earlier DStream scope.

I have also slightly tweaked how callsites are set such that the short callsite reflects the RDD operation name and line number. This tweak is necessary as callsites are not managed through scopes (which support nesting and overriding) and I didnt want to add another local property to control nesting and overriding of callsites.

## Before:
![image](https://cloud.githubusercontent.com/assets/663212/10808548/fa71c0c4-7da9-11e5-9af0-5737793a146f.png)

## After:
![image](https://cloud.githubusercontent.com/assets/663212/10808659/37bc45b6-7dab-11e5-8041-c20be6a9bc26.png)

The code that was used to generate this is:
```
    val lines = ssc.socketTextStream(args(0), args(1).toInt, StorageLevel.MEMORY_AND_DISK_SER)
    val words = lines.flatMap(_.split(" "))
    val wordCounts = words.map(x => (x, 1)).reduceByKey(_ + _)
    wordCounts.foreachRDD { rdd =>
      val temp = rdd.map { _ -> 1 }.reduceByKey( _ + _)
      val temp2 = temp.map { _ -> 1}.reduceByKey(_ + _)
      val count = temp2.count
      println(count)
    }
```

Note
- The inner scopes of the RDD operations map/reduceByKey inside foreachRDD is visible
- The short callsites of stages refers to the line number of the RDD ops rather than the same line number of foreachRDD in all three cases.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9315 from tdas/SPARK-11361.
2015-11-10 16:54:06 -08:00
Burak Yavuz 1431319e5b Add mockito as an explicit test dependency to spark-streaming
While sbt successfully compiles as it properly pulls the mockito dependency, maven builds have broken. We need this in ASAP.
tdas

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9584 from brkyvz/fix-master.
2015-11-09 18:53:57 -08:00
Shixiong Zhu 6502944f39 [SPARK-11333][STREAMING] Add executorId to ReceiverInfo and display it in UI
Expose executorId to `ReceiverInfo` and UI since it's helpful when there are multiple executors running in the same host. Screenshot:

<img width="1058" alt="screen shot 2015-11-02 at 10 52 19 am" src="https://cloud.githubusercontent.com/assets/1000778/10890968/2e2f5512-8150-11e5-8d9d-746e826b69e8.png">

Author: Shixiong Zhu <shixiong@databricks.com>
Author: zsxwing <zsxwing@gmail.com>

Closes #9418 from zsxwing/SPARK-11333.
2015-11-09 18:13:37 -08:00
zsxwing 1f0f14efe3 [SPARK-11462][STREAMING] Add JavaStreamingListener
Currently, StreamingListener is not Java friendly because it exposes some Scala collections to Java users directly, such as Option, Map.

This PR added a Java version of StreamingListener and a bunch of Java friendly classes for Java users.

Author: zsxwing <zsxwing@gmail.com>
Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9420 from zsxwing/java-streaming-listener.
2015-11-09 17:38:19 -08:00
Burak Yavuz 0ce6f9b2d2 [SPARK-11141][STREAMING] Batch ReceivedBlockTrackerLogEvents for WAL writes
When using S3 as a directory for WALs, the writes take too long. The driver gets very easily bottlenecked when multiple receivers send AddBlock events to the ReceiverTracker. This PR adds batching of events in the ReceivedBlockTracker so that receivers don't get blocked by the driver for too long.

cc zsxwing tdas

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9143 from brkyvz/batch-wal-writes.
2015-11-09 17:35:12 -08:00
Shixiong Zhu cf69ce1365 [SPARK-11511][STREAMING] Fix NPE when an InputDStream is not used
Just ignored `InputDStream`s that have null `rememberDuration` in `DStreamGraph.getMaxInputStreamRememberDuration`.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9476 from zsxwing/SPARK-11511.
2015-11-06 14:51:53 +00:00
jerryshao 468ad0ae87 [SPARK-11457][STREAMING][YARN] Fix incorrect AM proxy filter conf recovery from checkpoint
Currently Yarn AM proxy filter configuration is recovered from checkpoint file when Spark Streaming application is restarted, which will lead to some unwanted behaviors:

1. Wrong RM address if RM is redeployed from failure.
2. Wrong proxyBase, since app id is updated, old app id for proxyBase is wrong.

So instead of recovering from checkpoint file, these configurations should be reloaded each time when app started.

This problem only exists in Yarn cluster mode, for Yarn client mode, these configurations will be updated with RPC message `AddWebUIFilter`.

Please help to review tdas harishreedharan vanzin , thanks a lot.

Author: jerryshao <sshao@hortonworks.com>

Closes #9412 from jerryshao/SPARK-11457.
2015-11-05 18:03:12 -08:00
Sean Owen 6f81eae24f [SPARK-11440][CORE][STREAMING][BUILD] Declare rest of @Experimental items non-experimental if they've existed since 1.2.0
Remove `Experimental` annotations in core, streaming for items that existed in 1.2.0 or before. The changes are:

* SparkContext
  * binary{Files,Records} : 1.2.0
  * submitJob : 1.0.0
* JavaSparkContext
  * binary{Files,Records} : 1.2.0
* DoubleRDDFunctions, JavaDoubleRDD
  * {mean,sum}Approx : 1.0.0
* PairRDDFunctions, JavaPairRDD
  * sampleByKeyExact : 1.2.0
  * countByKeyApprox : 1.0.0
* PairRDDFunctions
  * countApproxDistinctByKey : 1.1.0
* RDD
  * countApprox, countByValueApprox, countApproxDistinct : 1.0.0
* JavaRDDLike
  * countApprox : 1.0.0
* PythonHadoopUtil.Converter : 1.1.0
* PortableDataStream : 1.2.0 (related to binaryFiles)
* BoundedDouble : 1.0.0
* PartialResult : 1.0.0
* StreamingContext, JavaStreamingContext
  * binaryRecordsStream : 1.2.0
* HiveContext
  * analyze : 1.2.0

Author: Sean Owen <sowen@cloudera.com>

Closes #9396 from srowen/SPARK-11440.
2015-11-05 09:08:53 +00:00
zsxwing 9fbd75ab5d [SPARK-11212][CORE][STREAMING] Make preferred locations support ExecutorCacheTaskLocation and update…
… ReceiverTracker and ReceiverSchedulingPolicy to use it

This PR includes the following changes:

1. Add a new preferred location format, `executor_<host>_<executorID>` (e.g., "executor_localhost_2"), to support specifying the executor locations for RDD.
2. Use the new preferred location format in `ReceiverTracker` to optimize the starting time of Receivers when there are multiple executors in a host.

The goal of this PR is to enable the streaming scheduler to place receivers (which run as tasks) in specific executors. Basically, I want to have more control on the placement of the receivers such that they are evenly distributed among the executors. We tried to do this without changing the core scheduling logic. But it does not allow specifying particular executor as preferred location, only at the host level. So if there are two executors in the same host, and I want two receivers to run on them (one on each executor), I cannot specify that. Current code only specifies the host as preference, which may end up launching both receivers on the same executor. We try to work around it but restarting a receiver when it does not launch in the desired executor and hope that next time it will be started in the right one. But that cause lots of restarts, and delays in correctly launching the receiver.

So this change, would allow the streaming scheduler to specify the exact executor as the preferred location. Also this is not exposed to the user, only the streaming scheduler uses this.

Author: zsxwing <zsxwing@gmail.com>

Closes #9181 from zsxwing/executor-location.
2015-10-27 16:14:33 -07:00
Burak Yavuz 4f030b9e82 [SPARK-11324][STREAMING] Flag for closing Write Ahead Logs after a write
Currently the Write Ahead Log in Spark Streaming flushes data as writes need to be made. S3 does not support flushing of data, data is written once the stream is actually closed.
In case of failure, the data for the last minute (default rolling interval) will not be properly written. Therefore we need a flag to close the stream after the write, so that we achieve read after write consistency.

cc tdas zsxwing

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9285 from brkyvz/caw-wal.
2015-10-27 16:01:26 -07:00
maxwell 17f4999207 [SPARK-5569][STREAMING] fix ObjectInputStreamWithLoader for supporting load array classes.
When use Kafka DirectStream API to create checkpoint and restore saved checkpoint when restart,
ClassNotFound exception would occur.

The reason for this error is that ObjectInputStreamWithLoader extends the ObjectInputStream class and override its resolveClass method. But Instead of Using Class.forName(desc,false,loader), Spark uses loader.loadClass(desc) to instance the class, which do not works with array class.

For example:
Class.forName("[Lorg.apache.spark.streaming.kafka.OffsetRange.",false,loader) works well while loader.loadClass("[Lorg.apache.spark.streaming.kafka.OffsetRange") would throw an class not found exception.

details of the difference between Class.forName and loader.loadClass can be found here.
http://bugs.java.com/view_bug.do?bug_id=6446627

Author: maxwell <maxwellzdm@gmail.com>
Author: DEMING ZHU <deming.zhu@linecorp.com>

Closes #8955 from maxwellzdm/master.
2015-10-27 01:31:28 -07:00
Josh Rosen 85e654c5ec [SPARK-10984] Simplify *MemoryManager class structure
This patch refactors the MemoryManager class structure. After #9000, Spark had the following classes:

- MemoryManager
- StaticMemoryManager
- ExecutorMemoryManager
- TaskMemoryManager
- ShuffleMemoryManager

This is fairly confusing. To simplify things, this patch consolidates several of these classes:

- ShuffleMemoryManager and ExecutorMemoryManager were merged into MemoryManager.
- TaskMemoryManager is moved into Spark Core.

**Key changes and tasks**:

- [x] Merge ExecutorMemoryManager into MemoryManager.
  - [x] Move pooling logic into Allocator.
- [x] Move TaskMemoryManager from `spark-unsafe` to `spark-core`.
- [x] Refactor the existing Tungsten TaskMemoryManager interactions so Tungsten code use only this and not both this and ShuffleMemoryManager.
- [x] Refactor non-Tungsten code to use the TaskMemoryManager instead of ShuffleMemoryManager.
- [x] Merge ShuffleMemoryManager into MemoryManager.
  - [x] Move code
  - [x] ~~Simplify 1/n calculation.~~ **Will defer to followup, since this needs more work.**
- [x] Port ShuffleMemoryManagerSuite tests.
- [x] Move classes from `unsafe` package to `memory` package.
- [ ] Figure out how to handle the hacky use of the memory managers in HashedRelation's broadcast variable construction.
- [x] Test porting and cleanup: several tests relied on mock functionality (such as `TestShuffleMemoryManager.markAsOutOfMemory`) which has been changed or broken during the memory manager consolidation
  - [x] AbstractBytesToBytesMapSuite
  - [x] UnsafeExternalSorterSuite
  - [x] UnsafeFixedWidthAggregationMapSuite
  - [x] UnsafeKVExternalSorterSuite

**Compatiblity notes**:

- This patch introduces breaking changes in `ExternalAppendOnlyMap`, which is marked as `DevloperAPI` (likely for legacy reasons): this class now cannot be used outside of a task.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #9127 from JoshRosen/SPARK-10984.
2015-10-25 21:19:52 -07:00
zsxwing 67582132bf [SPARK-11063] [STREAMING] Change preferredLocations of Receiver's RDD to hosts rather than hostports
The format of RDD's preferredLocations must be hostname but the format of Streaming Receiver's scheduling executors is hostport. So it doesn't work.

This PR converts `schedulerExecutors` to `hosts` before creating Receiver's RDD.

Author: zsxwing <zsxwing@gmail.com>

Closes #9075 from zsxwing/SPARK-11063.
2015-10-19 15:35:14 -07:00
zsxwing e1eef248f1 [SPARK-11104] [STREAMING] Fix a deadlock in StreamingContex.stop
The following deadlock may happen if shutdownHook and StreamingContext.stop are running at the same time.
```
Java stack information for the threads listed above:
===================================================
"Thread-2":
	at org.apache.spark.streaming.StreamingContext.stop(StreamingContext.scala:699)
	- waiting to lock <0x00000005405a1680> (a org.apache.spark.streaming.StreamingContext)
	at org.apache.spark.streaming.StreamingContext.org$apache$spark$streaming$StreamingContext$$stopOnShutdown(StreamingContext.scala:729)
	at org.apache.spark.streaming.StreamingContext$$anonfun$start$1.apply$mcV$sp(StreamingContext.scala:625)
	at org.apache.spark.util.SparkShutdownHook.run(ShutdownHookManager.scala:266)
	at org.apache.spark.util.SparkShutdownHookManager$$anonfun$runAll$1$$anonfun$apply$mcV$sp$1.apply$mcV$sp(ShutdownHookManager.scala:236)
	at org.apache.spark.util.SparkShutdownHookManager$$anonfun$runAll$1$$anonfun$apply$mcV$sp$1.apply(ShutdownHookManager.scala:236)
	at org.apache.spark.util.SparkShutdownHookManager$$anonfun$runAll$1$$anonfun$apply$mcV$sp$1.apply(ShutdownHookManager.scala:236)
	at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1697)
	at org.apache.spark.util.SparkShutdownHookManager$$anonfun$runAll$1.apply$mcV$sp(ShutdownHookManager.scala:236)
	at org.apache.spark.util.SparkShutdownHookManager$$anonfun$runAll$1.apply(ShutdownHookManager.scala:236)
	at org.apache.spark.util.SparkShutdownHookManager$$anonfun$runAll$1.apply(ShutdownHookManager.scala:236)
	at scala.util.Try$.apply(Try.scala:161)
	at org.apache.spark.util.SparkShutdownHookManager.runAll(ShutdownHookManager.scala:236)
	- locked <0x00000005405b6a00> (a org.apache.spark.util.SparkShutdownHookManager)
	at org.apache.spark.util.SparkShutdownHookManager$$anon$2.run(ShutdownHookManager.scala:216)
	at org.apache.hadoop.util.ShutdownHookManager$1.run(ShutdownHookManager.java:54)
"main":
	at org.apache.spark.util.SparkShutdownHookManager.remove(ShutdownHookManager.scala:248)
	- waiting to lock <0x00000005405b6a00> (a org.apache.spark.util.SparkShutdownHookManager)
	at org.apache.spark.util.ShutdownHookManager$.removeShutdownHook(ShutdownHookManager.scala:199)
	at org.apache.spark.streaming.StreamingContext.stop(StreamingContext.scala:712)
	- locked <0x00000005405a1680> (a org.apache.spark.streaming.StreamingContext)
	at org.apache.spark.streaming.StreamingContext.stop(StreamingContext.scala:684)
	- locked <0x00000005405a1680> (a org.apache.spark.streaming.StreamingContext)
	at org.apache.spark.streaming.SessionByKeyBenchmark$.main(SessionByKeyBenchmark.scala:108)
	at org.apache.spark.streaming.SessionByKeyBenchmark.main(SessionByKeyBenchmark.scala)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:680)
	at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:180)
	at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:205)
	at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:120)
	at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
```

This PR just moved `ShutdownHookManager.removeShutdownHook` out of `synchronized` to avoid deadlock.

Author: zsxwing <zsxwing@gmail.com>

Closes #9116 from zsxwing/stop-deadlock.
2015-10-16 13:56:51 -07:00
zsxwing 369d786f58 [SPARK-10974] [STREAMING] Add progress bar for output operation column and use red dots for failed batches
Screenshot:
<img width="1363" alt="1" src="https://cloud.githubusercontent.com/assets/1000778/10342571/385d9340-6d4c-11e5-8e79-1fa4c3c98f81.png">

Also fixed the description and duration for output operations that don't have spark jobs.
<img width="1354" alt="2" src="https://cloud.githubusercontent.com/assets/1000778/10342775/4bd52a0e-6d4d-11e5-99bc-26265a9fc792.png">

Author: zsxwing <zsxwing@gmail.com>

Closes #9010 from zsxwing/output-op-progress-bar.
2015-10-16 13:53:06 -07:00
jerryshao 43f5d1f326 [SPARK-11060] [STREAMING] Fix some potential NPE in DStream transformation
This patch fixes:

1. Guard out against NPEs in `TransformedDStream` when parent DStream returns None instead of empty RDD.
2. Verify some input streams which will potentially return None.
3. Add unit test to verify the behavior when input stream returns None.

cc tdas , please help to review, thanks a lot :).

Author: jerryshao <sshao@hortonworks.com>

Closes #9070 from jerryshao/SPARK-11060.
2015-10-16 11:53:47 +01:00
Tom Graves 135a2ce5b0 [SPARK-10619] Can't sort columns on Executor Page
should pick into spark 1.5.2 also.

https://issues.apache.org/jira/browse/SPARK-10619

looks like this was broken by commit: fb1d06fc24 (diff-b8adb646ef90f616c34eb5c98d1ebd16)
It looks like somethings were change to use the UIUtils.listingTable but executor page wasn't converted so when it removed sortable from the UIUtils. TABLE_CLASS_NOT_STRIPED it broke this page.

Simply add the sortable tag back in and it fixes both active UI and the history server UI.

Author: Tom Graves <tgraves@yahoo-inc.com>

Closes #9101 from tgravescs/SPARK-10619.
2015-10-14 10:12:25 -07:00
Jacker Hu a16396df76 [SPARK-10772] [STREAMING] [SCALA] NullPointerException when transform function in DStream returns NULL
Currently, the ```TransformedDStream``` will using ```Some(transformFunc(parentRDDs, validTime))``` as compute return value, when the ```transformFunc``` somehow returns null as return value, the followed operator will have NullPointerExeception.

This fix uses the ```Option()``` instead of ```Some()``` to deal with the possible null value. When   ```transformFunc``` returns ```null```, the option will transform null to ```None```, the downstream can handle ```None``` correctly.

NOTE (2015-09-25): The latest fix will check the return value of transform function, if it is ```NULL```, a spark exception will be thrown out

Author: Jacker Hu <gt.hu.chang@gmail.com>
Author: jhu-chang <gt.hu.chang@gmail.com>

Closes #8881 from jhu-chang/Fix_Transform.
2015-10-10 11:36:18 +01:00
Andrew Or 67fbecbf32 [SPARK-10956] Common MemoryManager interface for storage and execution
This patch introduces a `MemoryManager` that is the central arbiter of how much memory to grant to storage and execution. This patch is primarily concerned only with refactoring while preserving the existing behavior as much as possible.

This is the first step away from the existing rigid separation of storage and execution memory, which has several major drawbacks discussed on the [issue](https://issues.apache.org/jira/browse/SPARK-10956). It is the precursor of a series of patches that will attempt to address those drawbacks.

Author: Andrew Or <andrew@databricks.com>
Author: Josh Rosen <joshrosen@databricks.com>
Author: andrewor14 <andrew@databricks.com>

Closes #9000 from andrewor14/memory-manager.
2015-10-08 21:44:59 -07:00
Hari Shreedharan 0984129005 [SPARK-10955] [STREAMING] Add a warning if dynamic allocation for Streaming applications
Dynamic allocation can be painful for streaming apps and can lose data. Log a warning for streaming applications if dynamic allocation is enabled.

Author: Hari Shreedharan <hshreedharan@apache.org>

Closes #8998 from harishreedharan/ss-log-error and squashes the following commits:

462b264 [Hari Shreedharan] Improve log message.
2733d94 [Hari Shreedharan] Minor change to warning message.
eaa48cc [Hari Shreedharan] Log a warning instead of failing the application if dynamic allocation is enabled.
725f090 [Hari Shreedharan] Add config parameter to allow dynamic allocation if the user explicitly sets it.
b3f9a95 [Hari Shreedharan] Disable dynamic allocation and kill app if it is enabled.
a4a5212 [Hari Shreedharan] [streaming] SPARK-10955. Disable dynamic allocation for Streaming applications.
2015-10-08 18:53:38 -07:00
Marcelo Vanzin 94fc57afdf [SPARK-10300] [BUILD] [TESTS] Add support for test tags in run-tests.py.
Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #8775 from vanzin/SPARK-10300.
2015-10-07 14:11:21 -07:00
zsxwing ffe6831e49 [SPARK-10885] [STREAMING] Display the failed output op in Streaming UI
This PR implements the following features for both `master` and `branch-1.5`.
1. Display the failed output op count in the batch list
2. Display the failure reason of output op in the batch detail page

Screenshots:
<img width="1356" alt="1" src="https://cloud.githubusercontent.com/assets/1000778/10198387/5b2b97ec-67ce-11e5-81c2-f818b9d2f3ad.png">
<img width="1356" alt="2" src="https://cloud.githubusercontent.com/assets/1000778/10198388/5b76ac14-67ce-11e5-8c8b-de2683c5b485.png">

There are still two remaining problems in the UI.
1. If an output operation doesn't run any spark job, we cannot get the its duration since now it's the sum of all jobs' durations.
2. If an output operation doesn't run any spark job, we cannot get the description since it's the latest job's call site.

We need to add new `StreamingListenerEvent` about output operations to fix them. So I'd like to fix them only for `master` in another PR.

Author: zsxwing <zsxwing@gmail.com>

Closes #8950 from zsxwing/batch-failure.
2015-10-06 16:51:03 -07:00
zsxwing be7c5ff1ad [SPARK-10900] [STREAMING] Add output operation events to StreamingListener
Add output operation events to StreamingListener so as to implement the following UI features:

1. Progress bar of a batch in the batch list.
2. Be able to display output operation `description` and `duration` when there is no spark job in a Streaming job.

Author: zsxwing <zsxwing@gmail.com>

Closes #8958 from zsxwing/output-operation-events.
2015-10-05 19:23:41 -07:00
Guillaume Poulin be0dcd6eb1 FIX: rememberDuration reassignment error message
I was reading throught the scheduler and found this small mistake.

Author: Guillaume Poulin <guillaume@hopper.com>

Closes #8966 from gpoulin/remember_duration_typo.
2015-10-03 12:14:00 +01:00
zsxwing 107320c9bb [SPARK-6028] [CORE] Remerge #6457: new RPC implemetation and also pick #8905
This PR just reverted 02144d6745 to remerge #6457 and also included the commits in #8905.

Author: zsxwing <zsxwing@gmail.com>

Closes #8944 from zsxwing/SPARK-6028.
2015-10-03 01:04:35 -07:00
Xiangrui Meng 02144d6745 Revert "[SPARK-6028][Core]A new RPC implemetation based on the network module"
This reverts commit 084e4e1262.
2015-09-24 08:25:44 -07:00