Ankur Dave
59f625b745
Revert "Add debug logging to Pregel"
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This reverts commit e62013cdd92137507a96b6a5b347a1d239209587.
2013-12-14 15:28:24 -08:00
Ankur Dave
ee5c69e481
Fix bug in VertexPartition.isActive
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This took me ~5 hours to find!
2013-12-14 15:28:23 -08:00
Ankur Dave
4d3bba3a13
Add debug logging to Pregel
2013-12-14 15:28:23 -08:00
Ankur Dave
cf6288b993
Add PregelSuite
2013-12-14 15:28:23 -08:00
Ankur Dave
9c8b6224ec
Remove unused bound variable
2013-12-14 15:28:23 -08:00
Ankur Dave
ef17ab58cb
Add another mrTriplets test
2013-12-14 15:28:23 -08:00
Ankur Dave
b40824bc2b
Allow innerJoining VertexPartitions with different indexes
2013-12-14 15:28:23 -08:00
Ankur Dave
7a8952e9bb
Replace skipStale with activeSetOpt in mrTriplets (fails Pregel)
2013-12-14 15:28:23 -08:00
Ankur Dave
77b92748ad
Replace update with innerJoin (has a bug)
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There is a conflict between vertices that didn't change so are not moved
but still need to run, and vertices that were deleted by the innerJoin
so should not run.
2013-12-14 15:28:23 -08:00
Ankur Dave
d161caa6eb
Expose srcStale and dstStale
2013-12-14 15:28:23 -08:00
Ankur Dave
4bbae5c39b
Remove printlns from test
2013-12-14 15:28:23 -08:00
Ankur Dave
b2f595f552
Test more graph ops and skipStale
2013-12-14 15:28:22 -08:00
Ankur Dave
45ea674e21
Handle diffing VertexPartitions with different indexes
2013-12-14 15:28:22 -08:00
Ankur Dave
8f4b8e9b95
Reuse previous localVidMap if available
2013-12-14 15:28:22 -08:00
Ankur Dave
5e20cbaf66
Define localVidMap once per VTableReplicated
2013-12-14 15:28:22 -08:00
Ankur Dave
dc72147900
Fix bug in interaction of incr. view maint., skipStale, and join rewrite
2013-12-14 15:28:22 -08:00
Ankur Dave
d076fe5c9e
Finish up 49f7fc5ed2edd42b118182438d84ed7d4e7d521f
2013-12-14 15:28:22 -08:00
Ankur Dave
4f4f0add24
Fix bug in mapVertices and outerJoinVertices
2013-12-14 15:28:22 -08:00
Ankur Dave
6bf51a5e15
Don't expose {src,dst}Mask in EdgeTriplet
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Exposing this information is not necessary due to the addition of
skipStale.
2013-12-14 15:28:22 -08:00
Ankur Dave
87f2909561
Incremental view maintenance for all graph ops
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All GraphImpl operations now support incremental maintenance of the
replicated vertex view by reusing vTableReplicated whenever
possible. This has two consequences:
- This is not confined to the deltaJoinVertices operator anymore,
so we rename it to the more intuitive "updateVertices" instead.
- This enables mrTriplets to support skipStale.
2013-12-14 15:28:22 -08:00
Ankur Dave
c3e0f01ad9
Remove calls to ClosureCleaner in GraphX
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All Spark RDD methods already clean closures so we don't need to.
2013-12-14 15:28:21 -08:00
Ankur Dave
5b0d6f0ad5
Remove static Pregel; take maxIters in dynamic Pregel
2013-12-12 18:03:19 -08:00
Dan Crankshaw
12483d4ae6
Added BoundedPriorityQueue kryo registrator. Fixes top issue.
2013-12-11 20:56:21 -08:00
Ankur Dave
84d0e1a334
Set RDD names for easy debugging
2013-12-07 04:05:45 -08:00
Reynold Xin
41721b1494
Fixed a bug in VTableReplicated that we only process the first block.
2013-12-06 00:51:12 -08:00
Reynold Xin
3b0ee53eda
Minor update.
2013-12-05 23:30:56 -08:00
Reynold Xin
15168d6c4d
Fixed a bug in VTableReplicated that we are always broadcasting all the vertices.
2013-12-05 23:25:53 -08:00
Reynold Xin
a6075ba11f
Merge branch 'pregel-replicate-changed' of github.com:ankurdave/graphx into pregel-replicate-changed
2013-12-05 22:35:16 -08:00
Ankur Dave
b707861ba0
Simplify GraphImpl.deltaJoinVertices
2013-12-05 20:01:32 -08:00
Ankur Dave
67bfa7fd65
Test prevVTableReplicated code path
2013-12-05 19:16:00 -08:00
Reynold Xin
920282c36a
Merge branch 'pregel-replicate-changed' of github.com:ankurdave/graphx into pregel-replicate-changed
2013-12-05 18:57:36 -08:00
Ankur Dave
39b0256668
Use mask for dynamic Pregel
2013-12-05 18:55:59 -08:00
Ankur Dave
7457abe282
Re-roll last iteration of static Pregel loop
2013-12-05 16:59:49 -08:00
Reynold Xin
4f80dd22bd
Fixed a bug that variable encoding doesn't work for ints that use all 64 bits.
2013-12-05 16:19:37 -08:00
Ankur Dave
4d4c1c931e
Test Graph.deltaJoinVertices and VertexRDD.diff
2013-12-05 16:15:56 -08:00
Ankur Dave
15374fed97
In static Pregel, replicate only changed vertices
2013-12-05 15:55:33 -08:00
Reynold Xin
3fc4534d19
wip delta join.
2013-12-05 14:55:26 -08:00
Ankur Dave
6a7b396e5d
Finish work on #85
2013-12-05 12:35:03 -08:00
Ankur Dave
a3bb98b88a
Always write Vids using variable encoding
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Also, autoformat Serializers.scala.
2013-12-05 12:06:07 -08:00
Ankur Dave
2e583d2de4
Declare Vids explicitly to avoid ClassCastException
2013-12-04 17:34:14 -08:00
Ankur Dave
92e96f727e
Fix compile errors in GraphSuite and SerializerSuite
2013-12-04 17:29:52 -08:00
Reynold Xin
8701cb55e6
Use specialized shuffler for aggregation.
2013-12-01 21:55:50 -08:00
Reynold Xin
55edbb4209
Created an algorithms package and put all algorithms there.
2013-12-01 20:17:26 -08:00
Reynold Xin
583a389e3f
Removed PartitionStrategy from GraphImpl.
2013-11-30 17:00:54 -08:00
Reynold Xin
6eeadb667d
Created EdgeRDD.
2013-11-30 16:53:54 -08:00
Reynold Xin
34ee81415e
Merged Ankur's pull request #80 and fixed subgraph.
2013-11-30 15:10:30 -08:00
Reynold Xin
8e790b7f7a
Merge branch 'subgraph-test' of github.com:ankurdave/graphx into clean1
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Conflicts:
graph/src/main/scala/org/apache/spark/graph/impl/VertexPartition.scala
2013-11-30 14:48:43 -08:00
Reynold Xin
229022891f
Made all VertexPartition internal data structures private.
2013-11-30 14:45:56 -08:00
Reynold Xin
b30e0ae035
Added an optimized count to VertexSetRDD.
2013-11-30 14:24:18 -08:00
Reynold Xin
689f757f7a
Merge branch 'clean1' of github.com:amplab/graphx into clean1
2013-11-30 14:16:06 -08:00
