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7872 commits

Author SHA1 Message Date
Yuming Wang 5dda1fe296 [SPARK-27699][FOLLOW-UP][SQL][test-hadoop3.2][test-maven] Fix hadoop-3.2 test error
## What changes were proposed in this pull request?

This pr fix `hadoop-3.2` test error:
```
- SPARK-27699 Converting disjunctions into ORC SearchArguments *** FAILED ***
  Expected "...SS_THAN_EQUALS a 10)[
  leaf-1 = (LESS_THAN a 1)
  ]expr = (or (not leaf...", but got "...SS_THAN_EQUALS a 10)[, leaf-1 = (LESS_THAN a 1), ]expr = (or (not leaf..." (HiveOrcFilterSuite.scala:445)
```
https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/105514/consoleFull

## How was this patch tested?

N/A

Closes #24639 from wangyum/SPARK-27699.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-20 13:04:05 -07:00
Yuming Wang 974b879220 [SPARK-27694][SQL] Support auto-updating table statistics for data source CTAS command
## What changes were proposed in this pull request?

This pr makes it support collect statistics when CTAS(create a data source table using the result of a query).

## How was this patch tested?

unit tests and manual tests:
```sql
bin/spark-sql --conf spark.sql.statistics.size.autoUpdate.enabled=true -S

spark-sql> CREATE TABLE spark_27694 USING parquet AS SELECT 'a', 'b';
spark-sql> DESC FORMATTED spark_27694;
a	string	NULL
b	string	NULL

# Detailed Table Information
Database	default
Table	spark_27694
Owner	root
Created Time	Mon May 13 19:45:33 GMT-07:00 2019
Last Access	Wed Dec 31 17:00:00 GMT-07:00 1969
Created By	Spark 3.0.0-SNAPSHOT
Type	MANAGED
Provider	parquet
Statistics	561 bytes
Location	file:/user/hive/warehouse/spark_27694
Serde Library	org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe
InputFormat	org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat
OutputFormat	org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat
```

Closes #24596 from wangyum/SPARK-27694.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-19 22:29:40 -07:00
Ryan Blue bc46feaced [SPARK-27693][SQL] Add default catalog property
Add a SQL config property for the default v2 catalog.

Existing tests for regressions.

Closes #24594 from rdblue/SPARK-27693-add-default-catalog-config.

Authored-by: Ryan Blue <blue@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-19 21:30:52 -07:00
HyukjinKwon 2431ab0999 [SPARK-27771][SQL] Add SQL description for grouping functions (cube, rollup, grouping and grouping_id)
## What changes were proposed in this pull request?

Both look added as of 2.0 (see SPARK-12541 and SPARK-12706). I referred existing docs and examples in other API docs.

## How was this patch tested?

Manually built the documentation and, by running examples, by running `DESCRIBE FUNCTION EXTENDED`.

Closes #24642 from HyukjinKwon/SPARK-27771.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-19 19:26:20 -07:00
liuxian 9bca99b29b [SPARK-27552][SQL] The configuration hive.exec.stagingdir is invalid on Windows OS
## What changes were proposed in this pull requesst?
If we set `hive.exec.stagingdir=.test-staging\tmp`,
But the staging directory is still `.hive-staging` on Windows OS.

Reasons for failure:
Test code:
```
 val path = new Path("C:\\test\\hivetable")
  println("path.toString: " + path.toString)
  println("path.toUri.getPath: " + path.toUri.getPath)
```

Output:
```
path.toString: C:/test/hivetable
path.toUri.getPath: /C:/test/hivetable
```
 We can see that `path.toUri.getPath` has one more separator than `path.toString`,  and the separator is   ' / ',  not  ' \ '
So `stagingPathName.stripPrefix(inputPathName).stripPrefix(File.separator).startsWith(".")` will return false
## How was this patch tested?
1. Existed tests
2. Manual testing on Windows OS

Closes #24446 from 10110346/stagingdir.

Authored-by: liuxian <liu.xian3@zte.com.cn>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-05-17 14:00:17 -05:00
Gengliang Wang e39e97b73a [SPARK-27699][SQL] Partially push down disjunctive predicated in Parquet/ORC
## What changes were proposed in this pull request?

Currently, in `ParquetFilters` and `OrcFilters`, if the child predicate of `Or` operator can't be entirely pushed down, the predicates will be thrown away.
In fact, the conjunctive predicates under `Or` operators can be partially pushed down.
For example, says `a` and `b` are convertible, while `c` can't be pushed down, the predicate
`a or (b and c)`
can be converted as
`(a or b) and (a or c)`
We can still push down `(a or b)`.
We can't push down disjunctive predicates only when one of its children is not partially convertible.

This PR also improve the filter pushing down logic in `DataSourceV2Strategy`. With partial filter push down in `Or` operator, the result of `pushedFilters()` might not exist in the mapping `translatedFilterToExpr`.  To fix it, this PR changes the mapping `translatedFilterToExpr` as leaf filter expression to `sources.filter`, and later on rebuild the whole expression with the mapping.
## How was this patch tested?

Unit test

Closes #24598 from gengliangwang/pushdownDisjunctivePredicates.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-17 19:25:24 +08:00
Wenchen Fan fc5bd6da77 [SPARK-27576][SQL] table capability to skip the output column resolution
## What changes were proposed in this pull request?

Currently we have an analyzer rule, which resolves the output columns of data source v2 writing plans, to make sure the schema of input query is compatible with the table.

However, not all data sources need this check. For example, the `NoopDataSource` doesn't care about the schema of input query at all.

This PR introduces a new table capability: ACCEPT_ANY_SCHEMA. If a table reports this capability, we skip resolving output columns for it during write.

Note that, we already skip resolving output columns for `NoopDataSource` because it implements `SupportsSaveMode`. However, `SupportsSaveMode` is a hack and will be removed soon.

## How was this patch tested?

new test cases

Closes #24469 from cloud-fan/schema-check.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-16 16:24:53 -07:00
Shixiong Zhu 6a317c8f01 [SPARK-27735][SS] Parsing interval string should be case-insensitive in SS
## What changes were proposed in this pull request?

Some APIs in Structured Streaming requires the user to specify an interval. Right now these APIs don't accept upper-case strings.

This PR adds a new method `fromCaseInsensitiveString` to `CalendarInterval` to support paring upper-case strings, and fixes all APIs that need to parse an interval string.

## How was this patch tested?

The new unit test.

Closes #24619 from zsxwing/SPARK-27735.

Authored-by: Shixiong Zhu <zsxwing@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-16 13:58:27 -07:00
shivusondur c6a45e6f67 [SPARK-27722][SQL] removed the unsed "UnsafeKeyValueSorter" file.
## What changes were proposed in this pull request?

removed the unused "UnsafeKeyValueSorter.java" file

## How was this patch tested?

Ran Compilation and UT locally.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Closes #24622 from shivusondur/jira27722.

Authored-by: shivusondur <shivusondur@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-16 18:22:06 +08:00
Wenchen Fan 3e30a98810 [SPARK-27674][SQL] the hint should not be dropped after cache lookup
## What changes were proposed in this pull request?

This is a followup of https://github.com/apache/spark/pull/20365 .

#20365 fixed this problem when the hint node is a root node. This PR fixes this problem for all the cases.

## How was this patch tested?

a new test

Closes #24580 from cloud-fan/bug.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-05-15 15:47:52 -07:00
Yuming Wang 02c33694c8 [SPARK-27354][SQL] Move incompatible code from the hive-thriftserver module to sql/hive-thriftserver/v1.2.1
## What changes were proposed in this pull request?

When we upgraded the built-in Hive to 2.3.4, the current `hive-thriftserver` module is not compatible, such as these Hive changes:
1. [HIVE-12442](https://issues.apache.org/jira/browse/HIVE-12442) HiveServer2: Refactor/repackage HiveServer2's Thrift code so that it can be used in the tasks
2. [HIVE-12237](https://issues.apache.org/jira/browse/HIVE-12237) Use slf4j as logging facade
3. [HIVE-13169](https://issues.apache.org/jira/browse/HIVE-13169) HiveServer2: Support delegation token based connection when using http transport

So this PR moves the incompatible code to `sql/hive-thriftserver/v1.2.1` and copies it to `sql/hive-thriftserver/v2.3.4` for the next code review.

## How was this patch tested?

manual tests:
```
diff -urNa sql/hive-thriftserver/v1.2.1 sql/hive-thriftserver/v2.3.4
```

Closes #24282 from wangyum/SPARK-27354.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-05-15 14:52:08 -07:00
Xingbo Jiang 0bba5cf568 [SPARK-20774][SPARK-27036][SQL] Cancel the running broadcast execution on BroadcastTimeout
## What changes were proposed in this pull request?

In the existing code, a broadcast execution timeout for the Future only causes a query failure, but the job running with the broadcast and the computation in the Future are not canceled. This wastes resources and slows down the other jobs. This PR tries to cancel both the running job and the running hashed relation construction thread.

## How was this patch tested?

Add new test suite `BroadcastExchangeExec`

Closes #24595 from jiangxb1987/SPARK-20774.

Authored-by: Xingbo Jiang <xingbo.jiang@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-05-15 14:47:15 -07:00
Sean Owen bfb3ffe9b3 [SPARK-27682][CORE][GRAPHX][MLLIB] Replace use of collections and methods that will be removed in Scala 2.13 with work-alikes
## What changes were proposed in this pull request?

This replaces use of collection classes like `MutableList` and `ArrayStack` with workalikes that are available in 2.12, as they will be removed in 2.13. It also removes use of `.to[Collection]` as its uses was superfluous anyway. Removing `collection.breakOut` will have to wait until 2.13

## How was this patch tested?

Existing tests

Closes #24586 from srowen/SPARK-27682.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-05-15 09:29:12 -05:00
xy_xin fd9acf23b0 [SPARK-27713][SQL] Move org.apache.spark.sql.execution.* in catalyst to core
## What changes were proposed in this pull request?

`RecordBinaryComparator`, `UnsafeExternalRowSorter` and `UnsafeKeyValueSorter` now locates in catalyst, which should be moved to core, as they're used only in physical plan.

## How was this patch tested?

exist tests.

Closes #24607 from xianyinxin/SPARK-27713.

Authored-by: xy_xin <xianyin.xxy@alibaba-inc.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-15 15:24:21 +08:00
Ryan Blue 2da5b21834 [SPARK-24923][SQL] Implement v2 CreateTableAsSelect
## What changes were proposed in this pull request?

This adds a v2 implementation for CTAS queries

* Update the SQL parser to parse CREATE queries using multi-part identifiers
* Update `CheckAnalysis` to validate partitioning references with the CTAS query schema
* Add `CreateTableAsSelect` v2 logical plan and `CreateTableAsSelectExec` v2 physical plan
* Update create conversion from `CreateTableAsSelectStatement` to support the new v2 logical plan
* Update `DataSourceV2Strategy` to convert v2 CTAS logical plan to the new physical plan
* Add `findNestedField` to `StructType` to support reference validation

## How was this patch tested?

We have been running these changes in production for several months. Also:

* Add a test suite `CreateTablePartitioningValidationSuite` for new analysis checks
* Add a test suite for v2 SQL, `DataSourceV2SQLSuite`
* Update catalyst `DDLParserSuite` to use multi-part identifiers (`Seq[String]`)
* Add test cases to `PlanResolutionSuite` for v2 CTAS: known catalog and v2 source implementation

Closes #24570 from rdblue/SPARK-24923-add-v2-ctas.

Authored-by: Ryan Blue <blue@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-15 11:24:03 +08:00
Yuming Wang fee695d0cf [SPARK-27690][SQL] Remove materialized views first in HiveClientImpl.reset
## What changes were proposed in this pull request?

We should remove materialized view first otherwise(note that Hive 3.1 could reproduce this issue):
```scala
Cause: org.apache.derby.shared.common.error.DerbySQLIntegrityConstraintViolationException: DELETE on table 'TBLS' caused a violation of foreign key constraint 'MV_TABLES_USED_FK2' for key (4).  The statement has been rolled back.
at org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.TransactionResourceImpl.wrapInSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.TransactionResourceImpl.handleException(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection.handleException(Unknown Source)
at org.apache.derby.impl.jdbc.ConnectionChild.handleException(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedStatement.executeStatement(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedPreparedStatement.executeBatchElement(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedStatement.executeLargeBatch(Unknown Source)
```

## How was this patch tested?

Existing test

Closes #24592 from wangyum/SPARK-27690.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-14 09:05:22 -07:00
Sean Owen a10608cb82 [SPARK-27680][CORE][SQL][GRAPHX] Remove usage of Traversable
## What changes were proposed in this pull request?

This removes usage of `Traversable`, which is removed in Scala 2.13. This is mostly an internal change, except for the change in the `SparkConf.setAll` method. See additional comments below.

## How was this patch tested?

Existing tests.

Closes #24584 from srowen/SPARK-27680.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-05-14 09:14:56 -05:00
mingbo.pb 66f5a42ca5 [SPARK-27638][SQL] Cast string to date/timestamp in binary comparisons with dates/timestamps
## What changes were proposed in this pull request?

The below example works with both Mysql and Hive, however not with spark.

```
mysql> select * from date_test where date_col >= '2000-1-1';
+------------+
| date_col   |
+------------+
| 2000-01-01 |
+------------+
```
The reason is that Spark casts both sides to String type during date and string comparison for partial date support. Please find more details in https://issues.apache.org/jira/browse/SPARK-8420.

Based on some tests, the behavior of Date and String comparison in Hive and Mysql:
Hive: Cast to Date, partial date is not supported
Mysql: Cast to Date, certain "partial date" is supported by defining certain date string parse rules. Check out str_to_datetime in https://github.com/mysql/mysql-server/blob/5.5/sql-common/my_time.c

As below date patterns have been supported, the PR is to cast string to date when comparing string and date:
```
`yyyy`
`yyyy-[m]m`
`yyyy-[m]m-[d]d`
`yyyy-[m]m-[d]d `
`yyyy-[m]m-[d]d *`
`yyyy-[m]m-[d]dT*
```

## How was this patch tested?
UT has been added

Closes #24567 from pengbo/SPARK-27638.

Authored-by: mingbo.pb <mingbo.pb@alibaba-inc.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-14 17:10:36 +08:00
Liang-Chi Hsieh 8b0bdaa8e0 [SPARK-27671][SQL] Fix error when casting from a nested null in a struct
## What changes were proposed in this pull request?

When a null in a nested field in struct, casting from the struct throws error, currently.

```scala
scala> sql("select cast(struct(1, null) as struct<a:int,b:int>)").show
scala.MatchError: NullType (of class org.apache.spark.sql.types.NullType$)
  at org.apache.spark.sql.catalyst.expressions.Cast.castToInt(Cast.scala:447)
  at org.apache.spark.sql.catalyst.expressions.Cast.cast(Cast.scala:635)
  at org.apache.spark.sql.catalyst.expressions.Cast.$anonfun$castStruct$1(Cast.scala:603)
```

Similarly, inline table, which casts null in nested field under the hood, also throws an error.

```scala
scala> sql("select * FROM VALUES (('a', (10, null))), (('b', (10, 50))), (('c', null)) AS tab(x, y)").show
org.apache.spark.sql.AnalysisException: failed to evaluate expression named_struct('col1', 10, 'col2', NULL): NullType (of class org.apache.spark.sql.t
ypes.NullType$); line 1 pos 14
  at org.apache.spark.sql.catalyst.analysis.package$AnalysisErrorAt.failAnalysis(package.scala:47)
  at org.apache.spark.sql.catalyst.analysis.ResolveInlineTables.$anonfun$convert$6(ResolveInlineTables.scala:106)
```

This fixes the issue.

## How was this patch tested?

Added tests.

Closes #24576 from viirya/cast-null.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-13 12:40:46 -07:00
Yuming Wang f3ddd6f9da [SPARK-27402][SQL][TEST-HADOOP3.2][TEST-MAVEN] Fix hadoop-3.2 test issue(except the hive-thriftserver module)
## What changes were proposed in this pull request?

This pr fix hadoop-3.2 test issues(except the `hive-thriftserver` module):
1. Add `hive.metastore.schema.verification` and `datanucleus.schema.autoCreateAll` to HiveConf.
2. hadoop-3.2 support access the Hive metastore from 0.12 to 2.2

After [SPARK-27176](https://issues.apache.org/jira/browse/SPARK-27176) and this PR, we upgraded the built-in Hive to 2.3 when enabling the Hadoop 3.2+ profile. This upgrade fixes the following issues:
- [HIVE-6727](https://issues.apache.org/jira/browse/HIVE-6727): Table level stats for external tables are set incorrectly.
- [HIVE-15653](https://issues.apache.org/jira/browse/HIVE-15653): Some ALTER TABLE commands drop table stats.
- [SPARK-12014](https://issues.apache.org/jira/browse/SPARK-12014): Spark SQL query containing semicolon is broken in Beeline.
- [SPARK-25193](https://issues.apache.org/jira/browse/SPARK-25193): insert overwrite doesn't throw exception when drop old data fails.
- [SPARK-25919](https://issues.apache.org/jira/browse/SPARK-25919): Date value corrupts when tables are "ParquetHiveSerDe" formatted and target table is Partitioned.
- [SPARK-26332](https://issues.apache.org/jira/browse/SPARK-26332): Spark sql write orc table on viewFS throws exception.
- [SPARK-26437](https://issues.apache.org/jira/browse/SPARK-26437): Decimal data becomes bigint to query, unable to query.

## How was this patch tested?
This pr test Spark’s Hadoop 3.2 profile on jenkins and #24591 test Spark’s Hadoop 2.7 profile on jenkins

This PR close #24591

Closes #24391 from wangyum/SPARK-27402.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-05-13 10:35:26 -07:00
Liang-Chi Hsieh d169b0aac3 [SPARK-27653][SQL] Add max_by() and min_by() SQL aggregate functions
## What changes were proposed in this pull request?

This PR goes to add `max_by()` and `min_by()` SQL aggregate functions.

Quoting from the [Presto docs](https://prestodb.github.io/docs/current/functions/aggregate.html#max_by)

> max_by(x, y) → [same as x]
> Returns the value of x associated with the maximum value of y over all input values.

`min_by()` works similarly.

## How was this patch tested?

Added tests.

Closes #24557 from viirya/SPARK-27653.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-13 22:37:34 +08:00
zhoukang 126310ca68 [SPARK-26601][SQL] Make broadcast-exchange thread pool configurable
## What changes were proposed in this pull request?

Currently,thread number of broadcast-exchange thread pool is fixed and keepAliveSeconds is also fixed as 60s.

```
object BroadcastExchangeExec {
  private[execution] val executionContext = ExecutionContext.fromExecutorService(
    ThreadUtils.newDaemonCachedThreadPool("broadcast-exchange", 128))
}

 /**
   * Create a cached thread pool whose max number of threads is `maxThreadNumber`. Thread names
   * are formatted as prefix-ID, where ID is a unique, sequentially assigned integer.
   */
  def newDaemonCachedThreadPool(
      prefix: String, maxThreadNumber: Int, keepAliveSeconds: Int = 60): ThreadPoolExecutor = {
    val threadFactory = namedThreadFactory(prefix)
    val threadPool = new ThreadPoolExecutor(
      maxThreadNumber, // corePoolSize: the max number of threads to create before queuing the tasks
      maxThreadNumber, // maximumPoolSize: because we use LinkedBlockingDeque, this one is not used
      keepAliveSeconds,
      TimeUnit.SECONDS,
      new LinkedBlockingQueue[Runnable],
      threadFactory)
    threadPool.allowCoreThreadTimeOut(true)
    threadPool
  }
```

But some times, if the Thead object do not GC quickly it may caused server(driver) OOM. In such case,we need to make this thread pool configurable.
A case has described in https://issues.apache.org/jira/browse/SPARK-26601

## How was this patch tested?
UT

Closes #23670 from caneGuy/zhoukang/make-broadcat-config.

Authored-by: zhoukang <zhoukang199191@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-13 20:40:21 +09:00
Gengliang Wang be6d39c379 [SPARK-27668][SQL] File source V2: support reporting statistics
## What changes were proposed in this pull request?

In File source V1, the statistics of `HadoopFsRelation` is `compressionFactor * sizeInBytesOfAllFiles`.
To follow it, we can implement the interface SupportsReportStatistics in FileScan and report the same statistics.

## How was this patch tested?

Unit test

Closes #24571 from gengliangwang/stats.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-13 14:16:11 +08:00
Wenchen Fan 9ff77b198e [SPARK-27675][SQL] do not use MutableColumnarRow in ColumnarBatch
## What changes were proposed in this pull request?

To move DS v2 API to the catalyst module, we can't refer to an internal class (`MutableColumnarRow`) in `ColumnarBatch`.

This PR creates a read-only version of `MutableColumnarRow`, and use it in `ColumnarBatch`.

close https://github.com/apache/spark/pull/24546

## How was this patch tested?

existing tests

Closes #24581 from cloud-fan/mutable-row.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-12 19:59:56 +09:00
HyukjinKwon c71f217de1 [SPARK-27673][SQL] Add since info to random, regex, null expressions
## What changes were proposed in this pull request?

We should add since info to all expressions.

SPARK-7886 Rand / Randn
af3746ce0d RLike, Like (I manually checked that it exists from 1.0.0)
SPARK-8262 Split
SPARK-8256 RegExpReplace
SPARK-8255 RegExpExtract
9aadcffabd Coalesce / IsNull / IsNotNull (I manually checked that it exists from 1.0.0)
SPARK-14541 IfNull / NullIf / Nvl / Nvl2
SPARK-9080 IsNaN
SPARK-9168 NaNvl

## How was this patch tested?

N/A

Closes #24579 from HyukjinKwon/SPARK-27673.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-10 09:24:04 -07:00
HyukjinKwon 3442fcaa9b [SPARK-27672][SQL] Add since info to string expressions
## What changes were proposed in this pull request?

This PR adds since information to the all string expressions below:

SPARK-8241 ConcatWs
SPARK-16276 Elt
SPARK-1995 Upper / Lower
SPARK-20750 StringReplace
SPARK-8266 StringTranslate
SPARK-8244 FindInSet
SPARK-8253 StringTrimLeft
SPARK-8260 StringTrimRight
SPARK-8267 StringTrim
SPARK-8247 StringInstr
SPARK-8264 SubstringIndex
SPARK-8249 StringLocate
SPARK-8252 StringLPad
SPARK-8259 StringRPad
SPARK-16281 ParseUrl
SPARK-9154 FormatString
SPARK-8269 Initcap
SPARK-8257 StringRepeat
SPARK-8261 StringSpace
SPARK-8263 Substring
SPARK-21007 Right
SPARK-21007 Left
SPARK-8248 Length
SPARK-20749 BitLength
SPARK-20749 OctetLength
SPARK-8270 Levenshtein
SPARK-8271 SoundEx
SPARK-8238 Ascii
SPARK-20748 Chr
SPARK-8239 Base64
SPARK-8268 UnBase64
SPARK-8242 Decode
SPARK-8243 Encode
SPARK-8245 format_number
SPARK-16285 Sentences

## How was this patch tested?

N/A

Closes #24578 from HyukjinKwon/SPARK-27672.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-10 09:11:12 -07:00
Eric Liang 80de449f51 [MINOR][TEST] Fix schema mismatch error
## What changes were proposed in this pull request?

- the accumulator warning is too verbose
- when a test fails with schema mismatch, you never see the error message / exception

Closes #24549 from ericl/test-nits.

Lead-authored-by: Eric Liang <ekl@databricks.com>
Co-authored-by: Eric Liang <ekhliang@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-10 23:08:02 +08:00
Marco Gaido 78748b5752 [SPARK-27625][SQL] ScalaReflection support for annotated types
## What changes were proposed in this pull request?

If a type is annotated, `ScalaReflection` can fail if the datatype is an `Option`, a `Seq`, a `Map` and other similar types. This is because it assumes we are dealing with `TypeRef`, while types with annotations are `AnnotatedType`.

The PR deals with the case the annotation is present.

## How was this patch tested?

added UT

Closes #24564 from mgaido91/SPARK-27625.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-10 22:48:36 +08:00
Yuming Wang b5ffec12eb [SPARK-27563][FOLLOWUP] Fix to download new release from dist.apache.org
## What changes were proposed in this pull request?

`https://archive.apache.org/dist/spark/` does not have latest Spark 2.4.3:
<img src="https://user-images.githubusercontent.com/5399861/57288553-4264b600-70ec-11e9-8dcc-71b7589f5ad0.png" width="400">

This pr add `https://dist.apache.org/repos/dist/release/spark/` to mirrors list to download latest Spark.

https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/105202/testReport/org.apache.spark.sql.hive/HiveExternalCatalogVersionsSuite/_It_is_not_a_test_it_is_a_sbt_testing_SuiteSelector_/

## How was this patch tested?

manual tests:
```
build/sbt "hive/testOnly *.HiveExternalCatalogVersionsSuite"  -Phive
```

Closes #24544 from wangyum/Unable-to-download-Spark-2.4.3.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-05-09 08:45:52 -05:00
pgandhi 0969d7aa0c [SPARK-27207][SQL] : Ensure aggregate buffers are initialized again for So…
…rtBasedAggregate

Normally, the aggregate operations that are invoked for an aggregation buffer for User Defined Aggregate Functions(UDAF) follow the order like initialize(), update(), eval() OR initialize(), merge(), eval(). However, after a certain threshold configurable by spark.sql.objectHashAggregate.sortBased.fallbackThreshold is reached, ObjectHashAggregate falls back to SortBasedAggregator which invokes the merge or update operation without calling initialize() on the aggregate buffer.

## What changes were proposed in this pull request?

The fix here is to initialize aggregate buffers again when fallback to SortBasedAggregate operator happens.

## How was this patch tested?

The patch was tested as part of [SPARK-24935](https://issues.apache.org/jira/browse/SPARK-24935) as documented in PR https://github.com/apache/spark/pull/23778.

Closes #24149 from pgandhi999/SPARK-27207.

Authored-by: pgandhi <pgandhi@verizonmedia.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-09 11:12:20 +08:00
Gengliang Wang 78a403fab9 [SPARK-27627][SQL] Make option "pathGlobFilter" as a general option for all file sources
## What changes were proposed in this pull request?

### Background:
The data source option `pathGlobFilter` is introduced for Binary file format: https://github.com/apache/spark/pull/24354 , which can be used for filtering file names, e.g. reading `.png` files only while there is `.json` files in the same directory.

### Proposal:
Make the option `pathGlobFilter` as a general option for all file sources. The path filtering should happen in the path globbing on Driver.

### Motivation:
Filtering the file path names in file scan tasks on executors is kind of ugly.

### Impact:
1. The splitting of file partitions will be more balanced.
2. The metrics of file scan will be more accurate.
3. Users can use the option for reading other file sources.

## How was this patch tested?

Unit tests

Closes #24518 from gengliangwang/globFilter.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-09 08:41:43 +09:00
gengjiaan 57450ed9b7 [MINOR][SS] Rename secondLatestBatchId to secondLatestOffsets
## What changes were proposed in this pull request?

The mothod `populateStartOffsets` exists a inappropriate identifier `secondLatestBatchId`.
I think `secondLatestBatchId = latestBatchId - 1` and `offsetLog.get(latestBatchId - 1)` is a offset.
So I change the identifier as follows:
`secondLatestOffsets = offsetLog.get(latestBatchId - 1)`

## How was this patch tested?

Exists UT.

Closes #24550 from beliefer/fix-inappropriate-identifier.

Authored-by: gengjiaan <gengjiaan@360.cn>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-08 11:01:26 -07:00
Wenchen Fan bae5baae52 [SPARK-27642][SS] make v1 offset extends v2 offset
## What changes were proposed in this pull request?

To move DS v2 to the catalyst module, we can't make v2 offset rely on v1 offset, as v1 offset is in sql/core.

## How was this patch tested?

existing tests

Closes #24538 from cloud-fan/offset.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-05-07 23:03:15 -07:00
Yuming Wang 3ea44e52e7 [SPARK-27639][SQL] InMemoryTableScan shows the table name on UI if possible
## What changes were proposed in this pull request?
<img src="https://user-images.githubusercontent.com/5399861/57213799-7bccf100-701a-11e9-9872-d90b4a185dc6.png" width="200">

It only shows `InMemoryTableScan` when scanning InMemoryTable.
When there are many InMemoryTables, it is difficult to distinguish which one is what we are looking for. This PR show the table name when scanning InMemoryTable.

## How was this patch tested?

unit tests and manual tests

After this PR:
<img src="https://user-images.githubusercontent.com/5399861/57269120-d3219e80-70b8-11e9-9e56-1b5d4c071660.png" width="200">

Closes #24534 from wangyum/SPARK-27639.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-07 21:00:13 -07:00
Jose Torres 83f628b57d [SPARK-27253][SQL][FOLLOW-UP] Add a legacy flag to restore old session init behavior
## What changes were proposed in this pull request?

Add a legacy flag to restore the old session init behavior, where SparkConf defaults take precedence over configs in a parent session.

Closes #24540 from jose-torres/oss.

Authored-by: Jose Torres <torres.joseph.f+github@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-07 20:04:09 -07:00
Ryan Blue 303ee3fce0 [SPARK-24252][SQL] Add TableCatalog API
## What changes were proposed in this pull request?

This adds the TableCatalog API proposed in the [Table Metadata API SPIP](https://docs.google.com/document/d/1zLFiA1VuaWeVxeTDXNg8bL6GP3BVoOZBkewFtEnjEoo/edit#heading=h.m45webtwxf2d).

For `TableCatalog` to use `Table`, it needed to be moved into the catalyst module where the v2 catalog API is located. This also required moving `TableCapability`. Most of the files touched by this PR are import changes needed by this move.

## How was this patch tested?

This adds a test implementation and contract tests.

Closes #24246 from rdblue/SPARK-24252-add-table-catalog-api.

Authored-by: Ryan Blue <blue@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-08 10:31:06 +08:00
Adi Muraru 8ef4da753d [SPARK-27610][YARN] Shade netty native libraries
## What changes were proposed in this pull request?

Fixed the `spark-<version>-yarn-shuffle.jar` artifact packaging to shade the native netty libraries:
- shade the `META-INF/native/libnetty_*` native libraries when packagin
the yarn shuffle service jar. This is required as netty library loader
derives that based on shaded package name.
- updated the `org/spark_project` shade package prefix to `org/sparkproject`
(i.e. removed underscore) as the former breaks the netty native lib loading.

This was causing the yarn external shuffle service to fail
when spark.shuffle.io.mode=EPOLL

## How was this patch tested?
Manual tests

Closes #24502 from amuraru/SPARK-27610_master.

Authored-by: Adi Muraru <amuraru@adobe.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-05-07 10:47:36 -07:00
Wenchen Fan 6ef45301a4 [SPARK-27579][SQL] remove BaseStreamingSource and BaseStreamingSink
## What changes were proposed in this pull request?

`BaseStreamingSource` and `BaseStreamingSink` is used to unify v1 and v2 streaming data source API in some code paths.

This PR removes these 2 interfaces, and let the v1 API extend v2 API to keep API compatibility.

The motivation is https://github.com/apache/spark/pull/24416 . We want to move data source v2 to catalyst module, but `BaseStreamingSource` and `BaseStreamingSink` are in sql/core.

## How was this patch tested?

existing tests

Closes #24471 from cloud-fan/streaming.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-05-06 20:41:57 +08:00
Liang-Chi Hsieh 4b725e50a7 [SPARK-27439][SQL] Explainging Dataset should show correct resolved plans
## What changes were proposed in this pull request?

Because a review is resolved during analysis when we create a dataset, the content of the view is determined when the dataset is created, not when it is evaluated. Now the explain result of a dataset is not correctly consistent with the collected result of it, because we use pre-analyzed logical plan of the dataset in explain command. The explain command will analyzed the logical plan passed in. So if a view is changed after the dataset was created, the plans shown by explain command aren't the same with the plan of the dataset.

```scala
scala> spark.range(10).createOrReplaceTempView("test")
scala> spark.range(5).createOrReplaceTempView("test2")
scala> spark.sql("select * from test").createOrReplaceTempView("tmp001")
scala> val df = spark.sql("select * from tmp001")
scala> spark.sql("select * from test2").createOrReplaceTempView("tmp001")
scala> df.show
+---+
| id|
+---+
|  0|
|  1|
|  2|
|  3|
|  4|
|  5|
|  6|
|  7|
|  8|
|  9|
+---+
scala> df.explain(true)
```

Before:
```scala
== Parsed Logical Plan ==
'Project [*]
+- 'UnresolvedRelation `tmp001`

== Analyzed Logical Plan ==
id: bigint
Project [id#2L]
+- SubqueryAlias `tmp001`
   +- Project [id#2L]
      +- SubqueryAlias `test2`
         +- Range (0, 5, step=1, splits=Some(12))

== Optimized Logical Plan ==
Range (0, 5, step=1, splits=Some(12))

== Physical Plan ==
*(1) Range (0, 5, step=1, splits=12)
```

After:
```scala
== Parsed Logical Plan ==
'Project [*]
+- 'UnresolvedRelation `tmp001`

== Analyzed Logical Plan ==
id: bigint
Project [id#0L]
+- SubqueryAlias `tmp001`
   +- Project [id#0L]
      +- SubqueryAlias `test`
         +- Range (0, 10, step=1, splits=Some(12))

== Optimized Logical Plan ==
Range (0, 10, step=1, splits=Some(12))

== Physical Plan ==
*(1) Range (0, 10, step=1, splits=12)
```

To fix it, this passes query execution of Dataset when explaining it. The query execution contains pre-analyzed plan which is consistent with Dataset's result.

## How was this patch tested?

Manually test and unit test.

Closes #24464 from viirya/SPARK-27439-2.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-05 23:19:19 -07:00
Dilip Biswal 6001d476ce [SPARK-27596][SQL] The JDBC 'query' option doesn't work for Oracle database
## What changes were proposed in this pull request?
**Description from JIRA**
For the JDBC option `query`, we use the identifier name to start with underscore: s"(${subquery}) _SPARK_GEN_JDBC_SUBQUERY_NAME${curId.getAndIncrement()}". This is not supported by Oracle.
The Oracle doesn't seem to support identifier name to start with non-alphabet character (unless it is quoted) and has length restrictions as well. [link](https://docs.oracle.com/cd/B19306_01/server.102/b14200/sql_elements008.htm)

In this PR, the generated alias name 'SPARK_GEN_JDBC_SUBQUERY_NAME<int value>' is fixed to remove "_" prefix and also the alias name is shortened to not exceed the identifier length limit.

## How was this patch tested?
Tests are added for MySql, Postgress, Oracle and DB2 to ensure enough coverage.

Closes #24532 from dilipbiswal/SPARK-27596.

Authored-by: Dilip Biswal <dbiswal@us.ibm.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-05-05 21:52:23 -07:00
Liang-Chi Hsieh d9bcacf94b [SPARK-27629][PYSPARK] Prevent Unpickler from intervening each unpickling
## What changes were proposed in this pull request?

In SPARK-27612, one correctness issue was reported. When protocol 4 is used to pickle Python objects, we found that unpickled objects were wrong. A temporary fix was proposed by not using highest protocol.

It was found that Opcodes.MEMOIZE was appeared in the opcodes in protocol 4. It is suspect to this issue.

A deeper dive found that Opcodes.MEMOIZE stores objects into internal map of Unpickler object. We use single Unpickler object to unpickle serialized Python bytes. Stored objects intervenes next round of unpickling, if the map is not cleared.

We has two options:

1. Continues to reuse Unpickler, but calls its close after each unpickling.
2. Not to reuse Unpickler and create new Unpickler object in each unpickling.

This patch takes option 1.

## How was this patch tested?

Passing the test added in SPARK-27612 (#24519).

Closes #24521 from viirya/SPARK-27629.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-04 13:21:08 +09:00
Seth Fitzsimmons 5182aa25f0 [MINOR][DOCS] Correct date_trunc docs
## What changes were proposed in this pull request?

`date_trunc` argument order was flipped, phrasing was awkward.

## How was this patch tested?

Documentation-only.

Closes #24522 from mojodna/patch-2.

Authored-by: Seth Fitzsimmons <seth@mojodna.net>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-04 09:13:23 +09:00
sandeep katta c66ec43945 [SPARK-27555][SQL] HiveSerDe should fall back to hadoopconf if hive.default.fileformat is not found in SQLConf
## What changes were proposed in this pull request?

SQLConf does not load hive-site.xml.So HiveSerDe should fall back to hadoopconf if  hive.default.fileformat is not found in SQLConf

## How was this patch tested?

Tested manually.
Added UT

Closes #24489 from sandeep-katta/spark-27555.

Authored-by: sandeep katta <sandeep.katta2007@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-04 09:02:12 +09:00
gaoweikang 3859ca37d9 [SPARK-27586][SQL] Improve binary comparison: replace Scala's for-comprehension if statements with while loop
## What changes were proposed in this pull request?

This PR replaces for-comprehension if statement with while loop to gain better performance in `TypeUtils.compareBinary`.

## How was this patch tested?

Add UT to test old version and new version comparison result

Closes #24494 from woudygao/opt_binary_compare.

Authored-by: gaoweikang <gaoweikang@bytedance.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-02 20:33:27 -07:00
Marco Gaido 7a8cc8e071 [SPARK-27607][SQL] Improve Row.toString performance
## What changes were proposed in this pull request?

`Row.toString` is currently causing the useless creation of an `Array` containing all the values in the row before generating the string containing it. This operation adds a considerable overhead.

The PR proposes to avoid this operation in order to get a faster implementation.

## How was this patch tested?

Run

```scala
test("Row toString perf test") {
    val n = 100000
    val rows = (1 to n).map { i =>
      Row(i, i.toDouble, i.toString, i.toShort, true, null)
    }
    // warmup
    (1 to 10).foreach { _ => rows.foreach(_.toString) }

    val times = (1 to 100).map { _ =>
      val t0 = System.nanoTime()
      rows.foreach(_.toString)
      val t1 = System.nanoTime()
      t1 - t0
    }
    // scalastyle:off println
    println(s"Avg time on ${times.length} iterations for $n toString:" +
      s" ${times.sum.toDouble / times.length / 1e6} ms")
    // scalastyle:on println
  }
```
Before the PR:
```
Avg time on 100 iterations for 100000 toString: 61.08408419 ms
```
After the PR:
```
Avg time on 100 iterations for 100000 toString: 38.16539432 ms
```
This means the new implementation is about 1.60X faster than the original one.

Closes #24505 from mgaido91/SPARK-27607.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-02 07:20:33 -07:00
HyukjinKwon df8aa7ba8a [SPARK-27606][SQL] Deprecate 'extended' field in ExpressionDescription/ExpressionInfo
## What changes were proposed in this pull request?

After we added other fields, `arguments`, `examples`, `note` and `since` at SPARK-21485 and `deprecated` at SPARK-27328, we have nicer way to separately describe extended usages.

`extended` field and method at `ExpressionDescription`/`ExpressionInfo` is now pretty useless - it's not used in Spark side and only exists to keep backward compatibility.

This PR proposes to deprecate it.

## How was this patch tested?

Manually checked the deprecation waring is properly shown.

Closes #24500 from HyukjinKwon/SPARK-27606.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-02 21:10:00 +09:00
gatorsmile 2da406cae5 [SPARK-27618][SQL][FOLLOW-UP] Unnecessary access to externalCatalog
## What changes were proposed in this pull request?
This PR is to add test cases for ensuring that we do not have unnecessary access to externalCatalog.

In the future, we can follow these examples to improve our test coverage in this area.

## How was this patch tested?
N/A

Closes #24511 from gatorsmile/addTestcaseSpark-27618.

Authored-by: gatorsmile <gatorsmile@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-05-01 20:09:46 -07:00
HyukjinKwon 3670826af6 [SPARK-26921][R][DOCS] Document Arrow optimization and vectorized R APIs
## What changes were proposed in this pull request?

This PR adds SparkR with Arrow optimization documentation.

Note that looks CRAN issue in Arrow side won't look likely fixed soon, IMHO, even after Spark 3.0.
If it happen to be fixed, I will fix this doc too later.

Another note is that Arrow R package itself requires R 3.5+. So, I intentionally didn't note this.

## How was this patch tested?

Manually built and checked.

Closes #24506 from HyukjinKwon/SPARK-26924.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-02 10:02:14 +09:00
Artem Kalchenko a35043c9e2 [SPARK-27591][SQL] Fix UnivocityParser for UserDefinedType
## What changes were proposed in this pull request?

Fix bug in UnivocityParser. makeConverter method didn't work correctly for UsedDefinedType

## How was this patch tested?

A test suite for UnivocityParser has been extended.

Closes #24496 from kalkolab/spark-27591.

Authored-by: Artem Kalchenko <artem.kalchenko@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-05-01 08:27:51 +09:00
Sean Owen 25ee0474f4 [SPARK-26936][MINOR][FOLLOWUP] Don't need the JobConf anymore, it seems
## What changes were proposed in this pull request?

On a second look in comments, seems like the JobConf isn't needed anymore here. It was used inconsistently before, it seems, and I don't see any reason a Hadoop Job config is required here anyway.

## How was this patch tested?

Existing tests.

Closes #24491 from srowen/SPARK-26936.2.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-04-29 19:47:20 -07:00