## What changes were proposed in this pull request?
If we create a external datasource table with a non-qualified location , we should qualified it to store in catalog.
```
CREATE TABLE t(a string)
USING parquet
LOCATION '/path/xx'
CREATE TABLE t1(a string, b string)
USING parquet
PARTITIONED BY(b)
LOCATION '/path/xx'
```
when we get the table from catalog, the location should be qualified, e.g.'file:/path/xxx'
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#17095 from windpiger/tablepathQualified.
## What changes were proposed in this pull request?
A follow up to SPARK-19859:
- extract the calculation of `delayMs` and reuse it.
- update EventTimeWatermarkExec
- use the correct `delayMs` in EventTimeWatermark
## How was this patch tested?
Jenkins.
Author: uncleGen <hustyugm@gmail.com>
Closes#17221 from uncleGen/SPARK-19859.
### What changes were proposed in this pull request?
So far, the test cases in DDLSuites only verify the behaviors of InMemoryCatalog. That means, they do not cover the scenarios using HiveExternalCatalog. Thus, we need to improve the existing test suite to run these cases using Hive metastore.
When porting these test cases, a bug of `SET LOCATION` is found. `path` is not set when the location is changed.
After this PR, a few changes are made, as summarized below,
- `DDLSuite` becomes an abstract class. Both `InMemoryCatalogedDDLSuite` and `HiveCatalogedDDLSuite` extend it. `InMemoryCatalogedDDLSuite` is using `InMemoryCatalog`. `HiveCatalogedDDLSuite` is using `HiveExternalCatalog`.
- `InMemoryCatalogedDDLSuite` contains all the existing test cases in `DDLSuite`.
- `HiveCatalogedDDLSuite` contains a subset of `DDLSuite`. The following test cases are excluded:
1. The following test cases only make sense for `InMemoryCatalog`:
```
test("desc table for parquet data source table using in-memory catalog")
test("create a managed Hive source table") {
test("create an external Hive source table")
test("Create Hive Table As Select")
```
2. The following test cases are unable to be ported because we are unable to alter table provider when using Hive metastore. In the future PRs we need to improve the test cases so that altering table provider is not needed:
```
test("alter table: set location (datasource table)")
test("alter table: set properties (datasource table)")
test("alter table: unset properties (datasource table)")
test("alter table: set serde (datasource table)")
test("alter table: set serde partition (datasource table)")
test("alter table: change column (datasource table)")
test("alter table: add partition (datasource table)")
test("alter table: drop partition (datasource table)")
test("alter table: rename partition (datasource table)")
test("drop table - data source table")
```
**TODO** : in the future PRs, we need to remove `HiveDDLSuite` and move the test cases to either `DDLSuite`, `InMemoryCatalogedDDLSuite` or `HiveCatalogedDDLSuite`.
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16592 from gatorsmile/refactorDDLSuite.
## What changes were proposed in this pull request?
In general we have a checkAnalysis phase which validates the logical plan and throws AnalysisException on semantic errors. However we also can throw AnalysisException from a few analyzer rules like ResolveSubquery.
I found that we fire up the analyzer rules twice for the queries that throw AnalysisException from one of the analyzer rules. This is a very minor fix. We don't have to strictly fix it. I just got confused seeing the rule getting fired two times when i was not expecting it.
## How was this patch tested?
Tested manually.
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#17214 from dilipbiswal/analyis_twice.
## What changes were proposed in this pull request?
**The Problem**
There is a file stream source option called maxFileAge which limits how old the files can be, relative the latest file that has been seen. This is used to limit the files that need to be remembered as "processed". Files older than the latest processed files are ignored. This values is by default 7 days.
This causes a problem when both
latestFirst = true
maxFilesPerTrigger > total files to be processed.
Here is what happens in all combinations
1) latestFirst = false - Since files are processed in order, there wont be any unprocessed file older than the latest processed file. All files will be processed.
2) latestFirst = true AND maxFilesPerTrigger is not set - The maxFileAge thresholding mechanism takes one batch initialize. If maxFilesPerTrigger is not, then all old files get processed in the first batch, and so no file is left behind.
3) latestFirst = true AND maxFilesPerTrigger is set to X - The first batch process the latest X files. That sets the threshold latest file - maxFileAge, so files older than this threshold will never be considered for processing.
The bug is with case 3.
**The Solution**
Ignore `maxFileAge` when both `maxFilesPerTrigger` and `latestFirst` are set.
## How was this patch tested?
Regression test in `FileStreamSourceSuite`
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#17153 from brkyvz/maxFileAge.
## What changes were proposed in this pull request?
This PR proposes to add an API that loads `DataFrame` from `Dataset[String]` storing csv.
It allows pre-processing before loading into CSV, which means allowing a lot of workarounds for many narrow cases, for example, as below:
- Case 1 - pre-processing
```scala
val df = spark.read.text("...")
// Pre-processing with this.
spark.read.csv(df.as[String])
```
- Case 2 - use other input formats
```scala
val rdd = spark.sparkContext.newAPIHadoopFile("/file.csv.lzo",
classOf[com.hadoop.mapreduce.LzoTextInputFormat],
classOf[org.apache.hadoop.io.LongWritable],
classOf[org.apache.hadoop.io.Text])
val stringRdd = rdd.map(pair => new String(pair._2.getBytes, 0, pair._2.getLength))
spark.read.csv(stringRdd.toDS)
```
## How was this patch tested?
Added tests in `CSVSuite` and build with Scala 2.10.
```
./dev/change-scala-version.sh 2.10
./build/mvn -Pyarn -Phadoop-2.4 -Dscala-2.10 -DskipTests clean package
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16854 from HyukjinKwon/SPARK-15463.
Forking a newSession() from SparkSession currently makes a new SparkSession that does not retain SessionState (i.e. temporary tables, SQL config, registered functions etc.) This change adds a method cloneSession() which creates a new SparkSession with a copy of the parent's SessionState.
Subsequent changes to base session are not propagated to cloned session, clone is independent after creation.
If the base is changed after clone has been created, say user registers new UDF, then the new UDF will not be available inside the clone. Same goes for configs and temp tables.
Unit tests
Author: Kunal Khamar <kkhamar@outlook.com>
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16826 from kunalkhamar/fork-sparksession.
## What changes were proposed in this pull request?
Add a output mode parameter to `flatMapGroupsWithState` and just define `mapGroupsWithState` as `flatMapGroupsWithState(Update)`.
`UnsupportedOperationChecker` is modified to disallow unsupported cases.
- Batch mapGroupsWithState or flatMapGroupsWithState is always allowed.
- For streaming (map/flatMap)GroupsWithState, see the following table:
| Operators | Supported Query Output Mode |
| ------------- | ------------- |
| flatMapGroupsWithState(Update) without aggregation | Update |
| flatMapGroupsWithState(Update) with aggregation | None |
| flatMapGroupsWithState(Append) without aggregation | Append |
| flatMapGroupsWithState(Append) before aggregation | Append, Update, Complete |
| flatMapGroupsWithState(Append) after aggregation | None |
| Multiple flatMapGroupsWithState(Append)s | Append |
| Multiple mapGroupsWithStates | None |
| Mxing mapGroupsWithStates and flatMapGroupsWithStates | None |
| Other cases of multiple flatMapGroupsWithState | None |
## How was this patch tested?
The added unit tests. Here are the tests related to (map/flatMap)GroupsWithState:
```
[info] - batch plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on batch relation: supported (1 millisecond)
[info] - batch plan - flatMapGroupsWithState - multiple flatMapGroupsWithState(Append)s on batch relation: supported (0 milliseconds)
[info] - batch plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on batch relation: supported (0 milliseconds)
[info] - batch plan - flatMapGroupsWithState - multiple flatMapGroupsWithState(Update)s on batch relation: supported (0 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on streaming relation without aggregation in update mode: supported (2 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on streaming relation without aggregation in append mode: not supported (7 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on streaming relation without aggregation in complete mode: not supported (5 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on streaming relation with aggregation in Append mode: not supported (11 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on streaming relation with aggregation in Update mode: not supported (5 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on streaming relation with aggregation in Complete mode: not supported (5 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on streaming relation without aggregation in append mode: supported (1 millisecond)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on streaming relation without aggregation in update mode: not supported (6 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on streaming relation before aggregation in Append mode: supported (1 millisecond)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on streaming relation before aggregation in Update mode: supported (0 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on streaming relation before aggregation in Complete mode: supported (1 millisecond)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on streaming relation after aggregation in Append mode: not supported (6 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on streaming relation after aggregation in Update mode: not supported (4 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on streaming relation in complete mode: not supported (2 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on batch relation inside streaming relation in Append output mode: supported (1 millisecond)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Append) on batch relation inside streaming relation in Update output mode: supported (1 millisecond)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on batch relation inside streaming relation in Append output mode: supported (0 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - flatMapGroupsWithState(Update) on batch relation inside streaming relation in Update output mode: supported (0 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - multiple flatMapGroupsWithStates on streaming relation and all are in append mode: supported (2 milliseconds)
[info] - streaming plan - flatMapGroupsWithState - multiple flatMapGroupsWithStates on s streaming relation but some are not in append mode: not supported (7 milliseconds)
[info] - streaming plan - mapGroupsWithState - mapGroupsWithState on streaming relation without aggregation in append mode: not supported (3 milliseconds)
[info] - streaming plan - mapGroupsWithState - mapGroupsWithState on streaming relation without aggregation in complete mode: not supported (3 milliseconds)
[info] - streaming plan - mapGroupsWithState - mapGroupsWithState on streaming relation with aggregation in Append mode: not supported (6 milliseconds)
[info] - streaming plan - mapGroupsWithState - mapGroupsWithState on streaming relation with aggregation in Update mode: not supported (3 milliseconds)
[info] - streaming plan - mapGroupsWithState - mapGroupsWithState on streaming relation with aggregation in Complete mode: not supported (4 milliseconds)
[info] - streaming plan - mapGroupsWithState - multiple mapGroupsWithStates on streaming relation and all are in append mode: not supported (4 milliseconds)
[info] - streaming plan - mapGroupsWithState - mixing mapGroupsWithStates and flatMapGroupsWithStates on streaming relation: not supported (4 milliseconds)
```
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#17197 from zsxwing/mapgroups-check.
## What changes were proposed in this pull request?
Fix for SQL round function that modifies original column when underlying data frame is created from a local product.
import org.apache.spark.sql.functions._
case class NumericRow(value: BigDecimal)
val df = spark.createDataFrame(Seq(NumericRow(BigDecimal("1.23456789"))))
df.show()
+--------------------+
| value|
+--------------------+
|1.234567890000000000|
+--------------------+
df.withColumn("value_rounded", round('value)).show()
// before
+--------------------+-------------+
| value|value_rounded|
+--------------------+-------------+
|1.000000000000000000| 1|
+--------------------+-------------+
// after
+--------------------+-------------+
| value|value_rounded|
+--------------------+-------------+
|1.234567890000000000| 1|
+--------------------+-------------+
## How was this patch tested?
New unit test added to existing suite `org.apache.spark.sql.MathFunctionsSuite`
Author: Wojtek Szymanski <wk.szymanski@gmail.com>
Closes#17075 from wojtek-szymanski/SPARK-19727.
## What changes were proposed in this pull request?
Currently there are lots of places to make the path qualified, it is better to provide a function to do this, then the code will be more simple.
## How was this patch tested?
N/A
Author: windpiger <songjun@outlook.com>
Closes#17204 from windpiger/addQualifiledPathUtil.
### What changes were proposed in this pull request?
Observed by felixcheung in https://github.com/apache/spark/pull/16739, when users use the shuffle-enabled `repartition` API, they expect the partition they got should be the exact number they provided, even if they call shuffle-disabled `coalesce` later.
Currently, `CollapseRepartition` rule does not consider whether shuffle is enabled or not. Thus, we got the following unexpected result.
```Scala
val df = spark.range(0, 10000, 1, 5)
val df2 = df.repartition(10)
assert(df2.coalesce(13).rdd.getNumPartitions == 5)
assert(df2.coalesce(7).rdd.getNumPartitions == 5)
assert(df2.coalesce(3).rdd.getNumPartitions == 3)
```
This PR is to fix the issue. We preserve shuffle-enabled Repartition.
### How was this patch tested?
Added a test case
Author: Xiao Li <gatorsmile@gmail.com>
Closes#16933 from gatorsmile/CollapseRepartition.
## What changes were proposed in this pull request?
Since we have a `View` node now, we can remove the view identifier in `SubqueryAlias`, which was used to indicate a view node before.
## How was this patch tested?
Update the related test cases.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#17210 from jiangxb1987/SubqueryAlias.
## What changes were proposed in this pull request?
Reorder the joins using a dynamic programming algorithm (Selinger paper):
First we put all items (basic joined nodes) into level 1, then we build all two-way joins at level 2 from plans at level 1 (single items), then build all 3-way joins from plans at previous levels (two-way joins and single items), then 4-way joins ... etc, until we build all n-way joins and pick the best plan among them.
When building m-way joins, we only keep the best plan (with the lowest cost) for the same set of m items. E.g., for 3-way joins, we keep only the best plan for items {A, B, C} among plans (A J B) J C, (A J C) J B and (B J C) J A. Thus, the plans maintained for each level when reordering four items A, B, C, D are as follows:
```
level 1: p({A}), p({B}), p({C}), p({D})
level 2: p({A, B}), p({A, C}), p({A, D}), p({B, C}), p({B, D}), p({C, D})
level 3: p({A, B, C}), p({A, B, D}), p({A, C, D}), p({B, C, D})
level 4: p({A, B, C, D})
```
where p({A, B, C, D}) is the final output plan.
For cost evaluation, since physical costs for operators are not available currently, we use cardinalities and sizes to compute costs.
## How was this patch tested?
add test cases
Author: wangzhenhua <wangzhenhua@huawei.com>
Author: Zhenhua Wang <wzh_zju@163.com>
Closes#17138 from wzhfy/joinReorder.
## What changes were proposed in this pull request?
Make the `SET mapreduce.job.reduces` automatically converted to `spark.sql.shuffle.partitions`, it's similar to `SET mapred.reduce.tasks`.
## How was this patch tested?
unit tests
Author: Yuming Wang <wgyumg@gmail.com>
Closes#17020 from wangyum/SPARK-19693.
Previously, we were using the mirror of passed in `TypeTag` when reflecting to build an encoder. This fails when the outer class is built in (i.e. `Seq`'s default mirror is based on root classloader) but inner classes (i.e. `A` in `Seq[A]`) are defined in the REPL or a library.
This patch changes us to always reflect based on a mirror created using the context classloader.
Author: Michael Armbrust <michael@databricks.com>
Closes#17201 from marmbrus/replSeqEncoder.
## What changes were proposed in this pull request?
The new watermark should override the old one. Otherwise, we just pick up the first column which has a watermark, it may be unexpected.
## How was this patch tested?
The new test.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#17199 from zsxwing/SPARK-19859.
## What changes were proposed in this pull request?
`StreamingDeduplicateExec.watermarkPredicate` should filter based on keys. Otherwise, it may generate a wrong answer if the watermark column in `keyExpression` has a different position in the row.
`StateStoreSaveExec` has the same codes but its parent can makes sure the watermark column positions in `keyExpression` and `row` are the same.
## How was this patch tested?
The added test.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#17183 from zsxwing/SPARK-19841.
## What changes were proposed in this pull request?
Disallow cyclic view references, a cyclic view reference may be created by the following queries:
```
CREATE VIEW testView AS SELECT id FROM tbl
CREATE VIEW testView2 AS SELECT id FROM testView
ALTER VIEW testView AS SELECT * FROM testView2
```
In the above example, a reference cycle (testView -> testView2 -> testView) exsits.
We disallow cyclic view references by checking that in ALTER VIEW command, when the `analyzedPlan` contains the same `View` node with the altered view, we should prevent the behavior and throw an AnalysisException.
## How was this patch tested?
Test by `SQLViewSuite.test("correctly handle a cyclic view reference")`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#17152 from jiangxb1987/cyclic-view.
## What changes were proposed in this pull request?
Jira : https://issues.apache.org/jira/browse/SPARK-19843
Created wrapper classes (`IntWrapper`, `LongWrapper`) to wrap the result of parsing (which are primitive types). In case of problem in parsing, the method would return a boolean.
## How was this patch tested?
- Added new unit tests
- Ran a prod job which had conversion from string -> int and verified the outputs
## Performance
Tiny regression when all strings are valid integers
```
conversion to int: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
--------------------------------------------------------------------------------
trunk 502 / 522 33.4 29.9 1.0X
SPARK-19843 493 / 503 34.0 29.4 1.0X
```
Huge gain when all strings are invalid integers
```
conversion to int: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
-------------------------------------------------------------------------------
trunk 33913 / 34219 0.5 2021.4 1.0X
SPARK-19843 154 / 162 108.8 9.2 220.0X
```
Author: Tejas Patil <tejasp@fb.com>
Closes#17184 from tejasapatil/SPARK-19843_is_numeric_maybe.
## What changes were proposed in this pull request?
When un-cache a table, we should not only remove the cache entry for this table, but also un-cache any other cached plans that refer to this table.
This PR also includes some refactors:
1. use `java.util.LinkedList` to store the cache entries, so that it's safer to remove elements while iterating
2. rename `invalidateCache` to `recacheByPlan`, which is more obvious about what it does.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17097 from cloud-fan/cache.
## What changes were proposed in this pull request?
This pr added entries in `FunctionRegistry` and supported `to_json` in SQL.
## How was this patch tested?
Added tests in `JsonFunctionsSuite`.
Author: Takeshi Yamamuro <yamamuro@apache.org>
Closes#16981 from maropu/SPARK-19637.
## What changes were proposed in this pull request?
1. support boolean type in binary expression estimation.
2. deal with compound Not conditions.
3. avoid convert BigInt/BigDecimal directly to double unless it's within range (0, 1).
4. reorganize test code.
## How was this patch tested?
modify related test cases.
Author: wangzhenhua <wangzhenhua@huawei.com>
Author: Zhenhua Wang <wzh_zju@163.com>
Closes#17148 from wzhfy/fixFilter.
## What changes were proposed in this pull request?
Currently in DynamicPartitionWriteTask, when we get the paritionPath of a parition, we just escape the partition value, not escape the partition name.
this will cause some problems for some special partition name situation, for example :
1) if the partition name contains '%' etc, there will be two partition path created in the filesytem, one is for escaped path like '/path/a%25b=1', another is for unescaped path like '/path/a%b=1'.
and the data inserted stored in unescaped path, while the show partitions table will return 'a%25b=1' which the partition name is escaped. So here it is not consist. And I think the data should be stored in the escaped path in filesystem, which Hive2.0.0 also have the same action.
2) if the partition name contains ':', there will throw exception that new Path("/path","a:b"), this is illegal which has a colon in the relative path.
```
java.lang.IllegalArgumentException: java.net.URISyntaxException: Relative path in absolute URI: a:b
at org.apache.hadoop.fs.Path.initialize(Path.java:205)
at org.apache.hadoop.fs.Path.<init>(Path.java:171)
at org.apache.hadoop.fs.Path.<init>(Path.java:88)
... 48 elided
Caused by: java.net.URISyntaxException: Relative path in absolute URI: a:b
at java.net.URI.checkPath(URI.java:1823)
at java.net.URI.<init>(URI.java:745)
at org.apache.hadoop.fs.Path.initialize(Path.java:202)
... 50 more
```
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#17173 from windpiger/fixDatasourceSpecialCharPartitionName.
## What changes were proposed in this pull request?
Before this pr, LocalLimit/GlobalLimit/Sample propagates the same row count and column stats from its child, which is incorrect.
We can get the correct rowCount in Statistics for GlobalLimit/Sample whether cbo is enabled or not.
We don't know the rowCount for LocalLimit because we don't know the partition number at that time. Column stats should not be propagated because we don't know the distribution of columns after Limit or Sample.
## How was this patch tested?
Added test cases.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#16696 from wzhfy/limitEstimation.
## What changes were proposed in this pull request?
Bugfix for reading empty file with CSV data source. Instead of throwing `NoSuchElementException`, an empty data frame is returned.
## How was this patch tested?
Added new unit test in `org.apache.spark.sql.execution.datasources.csv.CSVSuite`
Author: Wojtek Szymanski <wk.szymanski@gmail.com>
Closes#17068 from wojtek-szymanski/SPARK-19709.
## What changes were proposed in this pull request?
Currently we don't explicitly forbid the following behaviors:
1. The statement CREATE VIEW AS INSERT INTO throws the following exception:
```
scala> spark.sql("CREATE VIEW testView AS INSERT INTO tab VALUES (1, \"a\")")
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: org.apache.hadoop.hive.ql.metadata.HiveException: at least one column must be specified for the table;
scala> spark.sql("CREATE VIEW testView(a, b) AS INSERT INTO tab VALUES (1, \"a\")")
org.apache.spark.sql.AnalysisException: The number of columns produced by the SELECT clause (num: `0`) does not match the number of column names specified by CREATE VIEW (num: `2`).;
```
2. The statement INSERT INTO view VALUES throws the following exception from checkAnalysis:
```
scala> spark.sql("INSERT INTO testView VALUES (1, \"a\")")
org.apache.spark.sql.AnalysisException: Inserting into an RDD-based table is not allowed.;;
'InsertIntoTable View (`default`.`testView`, [a#16,b#17]), false, false
+- LocalRelation [col1#14, col2#15]
```
After this PR, the behavior changes to:
```
scala> spark.sql("CREATE VIEW testView AS INSERT INTO tab VALUES (1, \"a\")")
org.apache.spark.sql.catalyst.parser.ParseException: Operation not allowed: CREATE VIEW ... AS INSERT INTO;
scala> spark.sql("CREATE VIEW testView(a, b) AS INSERT INTO tab VALUES (1, \"a\")")
org.apache.spark.sql.catalyst.parser.ParseException: Operation not allowed: CREATE VIEW ... AS INSERT INTO;
scala> spark.sql("INSERT INTO testView VALUES (1, \"a\")")
org.apache.spark.sql.AnalysisException: `default`.`testView` is a view, inserting into a view is not allowed;
```
## How was this patch tested?
Add a new test case in `SparkSqlParserSuite`;
Update the corresponding test case in `SQLViewSuite`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#17125 from jiangxb1987/insert-with-view.
## What changes were proposed in this pull request?
Currently we treat the location of table/partition/database as URI string.
It will be safer if we can make the type of location as java.net.URI.
In this PR, there are following classes changes:
**1. CatalogDatabase**
```
case class CatalogDatabase(
name: String,
description: String,
locationUri: String,
properties: Map[String, String])
--->
case class CatalogDatabase(
name: String,
description: String,
locationUri: URI,
properties: Map[String, String])
```
**2. CatalogStorageFormat**
```
case class CatalogStorageFormat(
locationUri: Option[String],
inputFormat: Option[String],
outputFormat: Option[String],
serde: Option[String],
compressed: Boolean,
properties: Map[String, String])
---->
case class CatalogStorageFormat(
locationUri: Option[URI],
inputFormat: Option[String],
outputFormat: Option[String],
serde: Option[String],
compressed: Boolean,
properties: Map[String, String])
```
Before and After this PR, it is transparent for user, there is no change that the user should concern. The `String` to `URI` just happened in SparkSQL internally.
Here list some operation related location:
**1. whitespace in the location**
e.g. `/a/b c/d`
For both table location and partition location,
After `CREATE TABLE t... (PARTITIONED BY ...) LOCATION '/a/b c/d'` ,
then `DESC EXTENDED t ` show the location is `/a/b c/d`,
and the real path in the FileSystem also show `/a/b c/d`
**2. colon(:) in the location**
e.g. `/a/b:c/d`
For both table location and partition location,
when `CREATE TABLE t... (PARTITIONED BY ...) LOCATION '/a/b:c/d'` ,
**In linux file system**
`DESC EXTENDED t ` show the location is `/a/b:c/d`,
and the real path in the FileSystem also show `/a/b:c/d`
**in HDFS** throw exception:
`java.lang.IllegalArgumentException: Pathname /a/b:c/d from hdfs://iZbp1151s8hbnnwriekxdeZ:9000/a/b:c/d is not a valid DFS filename.`
**while** After `INSERT INTO TABLE t PARTITION(a="a:b") SELECT 1`
then `DESC EXTENDED t ` show the location is `/xxx/a=a%3Ab`,
and the real path in the FileSystem also show `/xxx/a=a%3Ab`
**3. percent sign(%) in the location**
e.g. `/a/b%c/d`
For both table location and partition location,
After `CREATE TABLE t... (PARTITIONED BY ...) LOCATION '/a/b%c/d'` ,
then `DESC EXTENDED t ` show the location is `/a/b%c/d`,
and the real path in the FileSystem also show `/a/b%c/d`
**4. encoded(%25) in the location**
e.g. `/a/b%25c/d`
For both table location and partition location,
After `CREATE TABLE t... (PARTITIONED BY ...) LOCATION '/a/b%25c/d'` ,
then `DESC EXTENDED t ` show the location is `/a/b%25c/d`,
and the real path in the FileSystem also show `/a/b%25c/d`
**while** After `INSERT INTO TABLE t PARTITION(a="%25") SELECT 1`
then `DESC EXTENDED t ` show the location is `/xxx/a=%2525`,
and the real path in the FileSystem also show `/xxx/a=%2525`
**Additionally**, except the location, there are two other factors will affect the location of the table/partition. one is the table name which does not allowed to have special characters, and the other is `partition name` which have the same actions with `partition value`, and `partition name` with special character situation has add some testcase and resolve a bug in [PR](https://github.com/apache/spark/pull/17173)
### Summary:
After `CREATE TABLE t... (PARTITIONED BY ...) LOCATION path`,
the path which we get from `DESC TABLE` and `real path in FileSystem` are all the same with the `CREATE TABLE` command(different filesystem has different action that allow what kind of special character to create the path, e.g. HDFS does not allow colon, but linux filesystem allow it ).
`DataBase` also have the same logic with `CREATE TABLE`
while if the `partition value` has some special character like `%` `:` `#` etc, then we will get the path with encoded `partition value` like `/xxx/a=A%25B` from `DESC TABLE` and `real path in FileSystem`
In this PR, the core change code is using `new Path(str).toUri` and `new Path(uri).toString`
which transfrom `str to uri `or `uri to str`.
for example:
```
val str = '/a/b c/d'
val uri = new Path(str).toUri --> '/a/b%20c/d'
val strFromUri = new Path(uri).toString -> '/a/b c/d'
```
when we restore table/partition from metastore, or get the location from `CREATE TABLE` command, we can use it as above to change string to uri `new Path(str).toUri `
## How was this patch tested?
unit test added.
The `current master branch` also `passed all the test cases` added in this PR by a litter change.
https://github.com/apache/spark/pull/17149/files#diff-b7094baa12601424a5d19cb930e3402fR1764
here `toURI` -> `toString` when test in master branch.
This can show that this PR is transparent for user.
Author: windpiger <songjun@outlook.com>
Closes#17149 from windpiger/changeStringToURI.
## What changes were proposed in this pull request?
This PR adds a new `Once` analysis rule batch consists of a single analysis rule `LookupFunctions` that performs simple existence check over `UnresolvedFunctions` without actually resolving them.
The benefit of this rule is that it doesn't require function arguments to be resolved first and therefore doesn't rely on relation resolution, which may incur potentially expensive partition/schema discovery cost.
Please refer to [SPARK-19737][1] for more details about the motivation.
## How was this patch tested?
New test case added in `AnalysisErrorSuite`.
[1]: https://issues.apache.org/jira/browse/SPARK-19737
Author: Cheng Lian <lian@databricks.com>
Closes#17168 from liancheng/spark-19737-lookup-functions.
## What changes were proposed in this pull request?
Hive hash to support Decimal datatype. [Hive internally normalises decimals](4ba713ccd8/storage-api/src/java/org/apache/hadoop/hive/common/type/HiveDecimalV1.java (L307)) and I have ported that logic as-is to HiveHash.
## How was this patch tested?
Added unit tests
Author: Tejas Patil <tejasp@fb.com>
Closes#17056 from tejasapatil/SPARK-17495_decimal.
## What changes were proposed in this pull request?
This PR proposes to both,
**Do not allow json arrays with multiple elements and return null in `from_json` with `StructType` as the schema.**
Currently, it only reads the single row when the input is a json array. So, the codes below:
```scala
import org.apache.spark.sql.functions._
import org.apache.spark.sql.types._
val schema = StructType(StructField("a", IntegerType) :: Nil)
Seq(("""[{"a": 1}, {"a": 2}]""")).toDF("struct").select(from_json(col("struct"), schema)).show()
```
prints
```
+--------------------+
|jsontostruct(struct)|
+--------------------+
| [1]|
+--------------------+
```
This PR simply suggests to print this as `null` if the schema is `StructType` and input is json array.with multiple elements
```
+--------------------+
|jsontostruct(struct)|
+--------------------+
| null|
+--------------------+
```
**Support json arrays in `from_json` with `ArrayType` as the schema.**
```scala
import org.apache.spark.sql.functions._
import org.apache.spark.sql.types._
val schema = ArrayType(StructType(StructField("a", IntegerType) :: Nil))
Seq(("""[{"a": 1}, {"a": 2}]""")).toDF("array").select(from_json(col("array"), schema)).show()
```
prints
```
+-------------------+
|jsontostruct(array)|
+-------------------+
| [[1], [2]]|
+-------------------+
```
## How was this patch tested?
Unit test in `JsonExpressionsSuite`, `JsonFunctionsSuite`, Python doctests and manual test.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16929 from HyukjinKwon/disallow-array.
## What changes were proposed in this pull request?
This pr is to support Seq, Map, and Struct in functions.lit; it adds a new IF named `lit2` with `TypeTag` for avoiding type erasure.
## How was this patch tested?
Added tests in `LiteralExpressionSuite`
Author: Takeshi Yamamuro <yamamuro@apache.org>
Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>
Closes#16610 from maropu/SPARK-19254.
## What changes were proposed in this pull request?
"DataFrameCallbackSuite.execute callback functions when a DataFrame action failed" sets the log level to "fatal" but doesn't recover it. Hence, tests running after it won't output any logs except fatal logs.
This PR uses `testQuietly` instead to avoid changing the log level.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#17156 from zsxwing/SPARK-19816.
A change in Hive 2.2 (most probably HIVE-13149) causes this code path to fail,
since the call to "state.getConf.setClassLoader" does not actually change the
context's class loader. Spark doesn't yet officially support Hive 2.2, but some
distribution-specific metastore client libraries may have that change (as certain
versions of CDH already do), and this also makes it easier to support 2.2 when it
comes out.
Tested with existing unit tests; we've also used this patch extensively with Hive
metastore client jars containing the offending patch.
Author: Marcelo Vanzin <vanzin@cloudera.com>
Closes#17154 from vanzin/SPARK-19804.
## What changes were proposed in this pull request?
[SPARK-19617](https://issues.apache.org/jira/browse/SPARK-19617) changed `HDFSMetadataLog` to enable interrupts when using the local file system. However, now we hit [HADOOP-12074](https://issues.apache.org/jira/browse/HADOOP-12074): `Shell.runCommand` converts `InterruptedException` to `new IOException(ie.toString())` before Hadoop 2.8. This is the Hadoop patch to fix HADOOP-1207: 95c73d49b1
This PR adds new logic to handle the following cases related to `InterruptedException`.
- Check if the message of IOException starts with `java.lang.InterruptedException`. If so, treat it as `InterruptedException`. This is for pre-Hadoop 2.8.
- Treat `InterruptedIOException` as `InterruptedException`. This is for Hadoop 2.8+ and other places that may throw `InterruptedIOException` when the thread is interrupted.
## How was this patch tested?
The new unit test.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#17044 from zsxwing/SPARK-19718.
### What changes were proposed in this pull request?
This PR is to make Spark work with Hive 2.0's metastores. Compared with Hive 1.2, Hive 2.0's metastore has an API update due to removal of `HOLD_DDLTIME` in https://issues.apache.org/jira/browse/HIVE-12224. Based on the following Hive JIRA description, `HOLD_DDLTIME` should be removed from our internal API too. (https://github.com/apache/spark/pull/17063 was submitted for it):
> This arcane feature was introduced long ago via HIVE-1394 It was broken as soon as it landed, HIVE-1442 and is thus useless. Fact that no one has fixed it since informs that its not really used by anyone. Better is to remove it so no one hits the bug of HIVE-1442
In the next PR, we will support 2.1.0 metastore, whose APIs were changed due to https://issues.apache.org/jira/browse/HIVE-12730. However, before that, we need a code cleanup for stats collection and setting.
### How was this patch tested?
Added test cases to VersionsSuite.scala
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17061 from gatorsmile/Hive2.
## What changes were proposed in this pull request?
This is a follow-up pr of #16308 and #16750.
This pr enables timezone support in partition values.
We should use `timeZone` option introduced at #16750 to parse/format partition values of the `TimestampType`.
For example, if you have timestamp `"2016-01-01 00:00:00"` in `GMT` which will be used for partition values, the values written by the default timezone option, which is `"GMT"` because the session local timezone is `"GMT"` here, are:
```scala
scala> spark.conf.set("spark.sql.session.timeZone", "GMT")
scala> val df = Seq((1, new java.sql.Timestamp(1451606400000L))).toDF("i", "ts")
df: org.apache.spark.sql.DataFrame = [i: int, ts: timestamp]
scala> df.show()
+---+-------------------+
| i| ts|
+---+-------------------+
| 1|2016-01-01 00:00:00|
+---+-------------------+
scala> df.write.partitionBy("ts").save("/path/to/gmtpartition")
```
```sh
$ ls /path/to/gmtpartition/
_SUCCESS ts=2016-01-01 00%3A00%3A00
```
whereas setting the option to `"PST"`, they are:
```scala
scala> df.write.option("timeZone", "PST").partitionBy("ts").save("/path/to/pstpartition")
```
```sh
$ ls /path/to/pstpartition/
_SUCCESS ts=2015-12-31 16%3A00%3A00
```
We can properly read the partition values if the session local timezone and the timezone of the partition values are the same:
```scala
scala> spark.read.load("/path/to/gmtpartition").show()
+---+-------------------+
| i| ts|
+---+-------------------+
| 1|2016-01-01 00:00:00|
+---+-------------------+
```
And even if the timezones are different, we can properly read the values with setting corrent timezone option:
```scala
// wrong result
scala> spark.read.load("/path/to/pstpartition").show()
+---+-------------------+
| i| ts|
+---+-------------------+
| 1|2015-12-31 16:00:00|
+---+-------------------+
// correct result
scala> spark.read.option("timeZone", "PST").load("/path/to/pstpartition").show()
+---+-------------------+
| i| ts|
+---+-------------------+
| 1|2016-01-01 00:00:00|
+---+-------------------+
```
## How was this patch tested?
Existing tests and added some tests.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#17053 from ueshin/issues/SPARK-18939.
## What changes were proposed in this pull request?
We call stop() on a Structured Streaming Source only when the stream is shutdown when a user calls streamingQuery.stop(). We should actually stop all sources when the stream fails as well, otherwise we may leak resources, e.g. connections to Kafka.
## How was this patch tested?
Unit tests in `StreamingQuerySuite`.
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#17107 from brkyvz/close-source.
## What changes were proposed in this pull request?
Changes to SQLQueryTests to make the order of the results constant.
Where possible ORDER BY has been added to match the existing expected output
## How was this patch tested?
Test runs on x86, zLinux (big endian), ppc (big endian)
Author: Pete Robbins <robbinspg@gmail.com>
Closes#17039 from robbinspg/SPARK-19710.
## What changes were proposed in this pull request?
When we resolve inline tables in analyzer, we will evaluate the expressions of inline tables.
When it evaluates a `TimeZoneAwareExpression` expression, an error will happen because the `TimeZoneAwareExpression` is not associated with timezone yet.
So we need to resolve these `TimeZoneAwareExpression`s with time zone when resolving inline tables.
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#17114 from viirya/resolve-timeawareexpr-inline-table.
## What changes were proposed in this pull request?
This PR suggests adding some comments in `UnivocityParser` logics to explain what happens. Also, it proposes, IMHO, a little bit cleaner (at least easy for me to explain).
## How was this patch tested?
Unit tests in `CSVSuite`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17142 from HyukjinKwon/SPARK-18699.
## What changes were proposed in this pull request?
Currently when we resolveRelation for a `FileFormat DataSource` without providing user schema, it will execute `listFiles` twice in `InMemoryFileIndex` during `resolveRelation`.
This PR add a `FileStatusCache` for DataSource, this can avoid listFiles twice.
But there is a bug in `InMemoryFileIndex` see:
[SPARK-19748](https://github.com/apache/spark/pull/17079)
[SPARK-19761](https://github.com/apache/spark/pull/17093),
so this pr should be after SPARK-19748/ SPARK-19761.
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#17081 from windpiger/resolveDataSourceScanFilesTwice.
## What changes were proposed in this pull request?
[SPARK-19779](https://issues.apache.org/jira/browse/SPARK-19779)
The PR (https://github.com/apache/spark/pull/17012) can to fix restart a Structured Streaming application using hdfs as fileSystem, but also exist a problem that a tmp file of delta file is still reserved in hdfs. And Structured Streaming don't delete the tmp file generated when restart streaming job in future.
## How was this patch tested?
unit tests
Author: guifeng <guifengleaf@gmail.com>
Closes#17124 from gf53520/SPARK-19779.
## What changes were proposed in this pull request?
- Add tests covering different scenarios with qualified column names
- Please see Section 2 in the design doc for the various test scenarios [here](https://issues.apache.org/jira/secure/attachment/12854681/Design_ColResolution_JIRA19602.pdf)
- As part of SPARK-19602, changes are made to support three part column name. In order to aid in the review and to reduce the diff, the test scenarios are separated out into this PR.
## How was this patch tested?
- This is a **test only** change. The individual test suites were run successfully.
Author: Sunitha Kambhampati <skambha@us.ibm.com>
Closes#17067 from skambha/colResolutionTests.
## What changes were proposed in this pull request?
Update doc for R, programming guide. Clarify default behavior for all languages.
## How was this patch tested?
manually
Author: Felix Cheung <felixcheung_m@hotmail.com>
Closes#17128 from felixcheung/jsonwholefiledoc.
## What changes were proposed in this pull request?
```
spark.sql(
s"""
|CREATE TABLE t
|USING parquet
|PARTITIONED BY(a, b)
|LOCATION '$dir'
|AS SELECT 3 as a, 4 as b, 1 as c, 2 as d
""".stripMargin)
```
Failed with the error message:
```
path file:/private/var/folders/6r/15tqm8hn3ldb3rmbfqm1gf4c0000gn/T/spark-195cd513-428a-4df9-b196-87db0c73e772 already exists.;
org.apache.spark.sql.AnalysisException: path file:/private/var/folders/6r/15tqm8hn3ldb3rmbfqm1gf4c0000gn/T/spark-195cd513-428a-4df9-b196-87db0c73e772 already exists.;
at org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand.run(InsertIntoHadoopFsRelationCommand.scala:102)
```
while hive table is ok ,so we should fix it for datasource table.
The reason is that the SaveMode check is put in `InsertIntoHadoopFsRelationCommand` , and the SaveMode check actually use `path`, this is fine when we use `DataFrameWriter.save()`, because this situation of SaveMode act on `path`.
While when we use `CreateDataSourceAsSelectCommand`, the situation of SaveMode act on table, and
we have already do SaveMode check in `CreateDataSourceAsSelectCommand` for table , so we should not do SaveMode check in the following logic in `InsertIntoHadoopFsRelationCommand` for path, this is redundant and wrong logic for `CreateDataSourceAsSelectCommand`
After this PR, the following DDL will succeed, when the location has been created we will append it or overwrite it.
```
CREATE TABLE ... (PARTITIONED BY ...) LOCATION path AS SELECT ...
```
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16938 from windpiger/CTASDataSourceWitLocation.
## What changes were proposed in this pull request?
This issue removes [a test case](https://github.com/apache/spark/blame/master/sql/hive/src/test/scala/org/apache/spark/sql/hive/InsertIntoHiveTableSuite.scala#L287-L298) which was introduced by [SPARK-14459](652bbb1bf6) and was superseded by [SPARK-16033](https://github.com/apache/spark/blame/master/sql/hive/src/test/scala/org/apache/spark/sql/hive/InsertIntoHiveTableSuite.scala#L365-L371). Basically, we cannot use `partitionBy` and `insertInto` together.
```scala
test("Reject partitioning that does not match table") {
withSQLConf(("hive.exec.dynamic.partition.mode", "nonstrict")) {
sql("CREATE TABLE partitioned (id bigint, data string) PARTITIONED BY (part string)")
val data = (1 to 10).map(i => (i, s"data-$i", if ((i % 2) == 0) "even" else "odd"))
.toDF("id", "data", "part")
intercept[AnalysisException] {
// cannot partition by 2 fields when there is only one in the table definition
data.write.partitionBy("part", "data").insertInto("partitioned")
}
}
}
```
## How was this patch tested?
This only removes a test case. Pass the existing Jenkins test.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#17106 from dongjoon-hyun/SPARK-19775.
## What changes were proposed in this pull request?
If we create a InMemoryFileIndex with an empty rootPaths when set PARALLEL_PARTITION_DISCOVERY_THRESHOLD to zero, it will throw an exception:
```
Positive number of slices required
java.lang.IllegalArgumentException: Positive number of slices required
at org.apache.spark.rdd.ParallelCollectionRDD$.slice(ParallelCollectionRDD.scala:119)
at org.apache.spark.rdd.ParallelCollectionRDD.getPartitions(ParallelCollectionRDD.scala:97)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2084)
at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:936)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:362)
at org.apache.spark.rdd.RDD.collect(RDD.scala:935)
at org.apache.spark.sql.execution.datasources.PartitioningAwareFileIndex$.org$apache$spark$sql$execution$datasources$PartitioningAwareFileIndex$$bulkListLeafFiles(PartitioningAwareFileIndex.scala:357)
at org.apache.spark.sql.execution.datasources.PartitioningAwareFileIndex.listLeafFiles(PartitioningAwareFileIndex.scala:256)
at org.apache.spark.sql.execution.datasources.InMemoryFileIndex.refresh0(InMemoryFileIndex.scala:74)
at org.apache.spark.sql.execution.datasources.InMemoryFileIndex.<init>(InMemoryFileIndex.scala:50)
at org.apache.spark.sql.execution.datasources.FileIndexSuite$$anonfun$9$$anonfun$apply$mcV$sp$2.apply$mcV$sp(FileIndexSuite.scala:186)
at org.apache.spark.sql.test.SQLTestUtils$class.withSQLConf(SQLTestUtils.scala:105)
at org.apache.spark.sql.execution.datasources.FileIndexSuite.withSQLConf(FileIndexSuite.scala:33)
at org.apache.spark.sql.execution.datasources.FileIndexSuite$$anonfun$9.apply$mcV$sp(FileIndexSuite.scala:185)
at org.apache.spark.sql.execution.datasources.FileIndexSuite$$anonfun$9.apply(FileIndexSuite.scala:185)
at org.apache.spark.sql.execution.datasources.FileIndexSuite$$anonfun$9.apply(FileIndexSuite.scala:185)
at org.scalatest.Transformer$$anonfun$apply$1.apply$mcV$sp(Transformer.scala:22)
at org.scalatest.OutcomeOf$class.outcomeOf(OutcomeOf.scala:85)
```
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#17093 from windpiger/fixEmptiPathInBulkListFiles.
## What changes were proposed in this pull request?
`Catalog.refreshByPath` can refresh the cache entry and the associated metadata for all dataframes (if any), that contain the given data source path.
However, `CacheManager.invalidateCachedPath` doesn't clear all cached plans with the specified path. It causes some strange behaviors reported in SPARK-15678.
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#17064 from viirya/fix-refreshByPath.
## What changes were proposed in this pull request?
Right now file source always uses `InMemoryFileIndex` to scan files from a given path.
But when reading the outputs from another streaming query, the file source should use `MetadataFileIndex` to list files from the sink log. This patch adds this support.
## `MetadataFileIndex` or `InMemoryFileIndex`
```scala
spark
.readStream
.format(...)
.load("/some/path") // for a non-glob path:
// - use `MetadataFileIndex` when `/some/path/_spark_meta` exists
// - fall back to `InMemoryFileIndex` otherwise
```
```scala
spark
.readStream
.format(...)
.load("/some/path/*/*") // for a glob path: always use `InMemoryFileIndex`
```
## How was this patch tested?
two newly added tests
Author: Liwei Lin <lwlin7@gmail.com>
Closes#16987 from lw-lin/source-read-from-sink.
## What changes were proposed in this pull request?
SPARK-15236 do this for scala shell, this ticket is for sparkR shell. This is not only for sparkR itself, but can also benefit downstream project like livy which use shell.R for its interactive session. For now, livy has no control of whether enable hive or not.
## How was this patch tested?
Tested it manually, run `bin/sparkR --master local --conf spark.sql.catalogImplementation=in-memory` and verify hive is not enabled.
Author: Jeff Zhang <zjffdu@apache.org>
Closes#16907 from zjffdu/SPARK-19572.
## What changes were proposed in this pull request?
This PR proposes the support for multiple lines for CSV by resembling the multiline supports in JSON datasource (in case of JSON, per file).
So, this PR introduces `wholeFile` option which makes the format not splittable and reads each whole file. Since Univocity parser can produces each row from a stream, it should be capable of parsing very large documents when the internal rows are fix in the memory.
## How was this patch tested?
Unit tests in `CSVSuite` and `tests.py`
Manual tests with a single 9GB CSV file in local file system, for example,
```scala
spark.read.option("wholeFile", true).option("inferSchema", true).csv("tmp.csv").count()
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16976 from HyukjinKwon/SPARK-19610.
## What changes were proposed in this pull request?
If we first cache a DataSource table, then we insert some data into the table, we should refresh the data in the cache after the insert command.
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16809 from windpiger/refreshCacheAfterInsert.
## What changes were proposed in this pull request?
HDFSBackedStateStoreProvider fails to rename files on HDFS but not on the local filesystem. According to the [implementation notes](https://hadoop.apache.org/docs/stable/hadoop-project-dist/hadoop-common/filesystem/filesystem.html) of `rename()`, the behavior of the local filesystem and HDFS varies:
> Destination exists and is a file
> Renaming a file atop an existing file is specified as failing, raising an exception.
> - Local FileSystem : the rename succeeds; the destination file is replaced by the source file.
> - HDFS : The rename fails, no exception is raised. Instead the method call simply returns false.
This patch ensures that `rename()` isn't called if the destination file already exists. It's still semantically correct because Structured Streaming requires that rerunning a batch should generate the same output.
## How was this patch tested?
This patch was tested by running `StateStoreSuite`.
Author: Roberto Agostino Vitillo <ra.vitillo@gmail.com>
Closes#17012 from vitillo/fix_rename.
## What changes were proposed in this pull request?
`MetastoreRelation` is used to represent table relation for hive tables, and provides some hive related information. We will resolve `SimpleCatalogRelation` to `MetastoreRelation` for hive tables, which is unnecessary as these 2 are the same essentially. This PR merges `SimpleCatalogRelation` and `MetastoreRelation`
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17015 from cloud-fan/table-relation.
## What changes were proposed in this pull request?
If we refresh a InMemoryFileIndex with a FileStatusCache, it will first use the FileStatusCache to re-generate the cachedLeafFiles etc, then call FileStatusCache.invalidateAll.
While the order to do these two actions is wrong, this lead to the refresh action does not take effect.
```
override def refresh(): Unit = {
refresh0()
fileStatusCache.invalidateAll()
}
private def refresh0(): Unit = {
val files = listLeafFiles(rootPaths)
cachedLeafFiles =
new mutable.LinkedHashMap[Path, FileStatus]() ++= files.map(f => f.getPath -> f)
cachedLeafDirToChildrenFiles = files.toArray.groupBy(_.getPath.getParent)
cachedPartitionSpec = null
}
```
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#17079 from windpiger/fixInMemoryFileIndexRefresh.
## What changes were proposed in this pull request?
Name socket source with a meaningful name
## How was this patch tested?
Jenkins
Author: uncleGen <hustyugm@gmail.com>
Closes#17082 from uncleGen/SPARK-19749.
## What changes were proposed in this pull request?
This PR proposes to replace the deprecated `json(RDD[String])` usage to `json(Dataset[String])`.
This currently produces so many warnings.
## How was this patch tested?
Fixed tests.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17071 from HyukjinKwon/SPARK-15615-followup.
## What changes were proposed in this pull request?
This PR proposes to fix the lint-breaks as below:
```
[ERROR] src/test/java/org/apache/spark/network/TransportResponseHandlerSuite.java:[29,8] (imports) UnusedImports: Unused import - org.apache.spark.network.buffer.ManagedBuffer.
[ERROR] src/main/java/org/apache/spark/unsafe/types/UTF8String.java:[156,10] (modifier) ModifierOrder: 'Nonnull' annotation modifier does not precede non-annotation modifiers.
[ERROR] src/main/java/org/apache/spark/SparkFirehoseListener.java:[122] (sizes) LineLength: Line is longer than 100 characters (found 105).
[ERROR] src/main/java/org/apache/spark/util/collection/unsafe/sort/UnsafeExternalSorter.java:[164,78] (coding) OneStatementPerLine: Only one statement per line allowed.
[ERROR] src/test/java/test/org/apache/spark/JavaAPISuite.java:[1157] (sizes) LineLength: Line is longer than 100 characters (found 121).
[ERROR] src/test/java/org/apache/spark/streaming/JavaMapWithStateSuite.java:[149] (sizes) LineLength: Line is longer than 100 characters (found 113).
[ERROR] src/test/java/test/org/apache/spark/streaming/Java8APISuite.java:[146] (sizes) LineLength: Line is longer than 100 characters (found 122).
[ERROR] src/test/java/test/org/apache/spark/streaming/JavaAPISuite.java:[32,8] (imports) UnusedImports: Unused import - org.apache.spark.streaming.Time.
[ERROR] src/test/java/test/org/apache/spark/streaming/JavaAPISuite.java:[611] (sizes) LineLength: Line is longer than 100 characters (found 101).
[ERROR] src/test/java/test/org/apache/spark/streaming/JavaAPISuite.java:[1317] (sizes) LineLength: Line is longer than 100 characters (found 102).
[ERROR] src/test/java/test/org/apache/spark/sql/JavaDatasetAggregatorSuite.java:[91] (sizes) LineLength: Line is longer than 100 characters (found 102).
[ERROR] src/test/java/test/org/apache/spark/sql/JavaDatasetSuite.java:[113] (sizes) LineLength: Line is longer than 100 characters (found 101).
[ERROR] src/test/java/test/org/apache/spark/sql/JavaDatasetSuite.java:[164] (sizes) LineLength: Line is longer than 100 characters (found 110).
[ERROR] src/test/java/test/org/apache/spark/sql/JavaDatasetSuite.java:[212] (sizes) LineLength: Line is longer than 100 characters (found 114).
[ERROR] src/test/java/org/apache/spark/mllib/tree/JavaDecisionTreeSuite.java:[36] (sizes) LineLength: Line is longer than 100 characters (found 101).
[ERROR] src/main/java/org/apache/spark/examples/streaming/JavaKinesisWordCountASL.java:[26,8] (imports) UnusedImports: Unused import - com.amazonaws.regions.RegionUtils.
[ERROR] src/test/java/org/apache/spark/streaming/kinesis/JavaKinesisStreamSuite.java:[20,8] (imports) UnusedImports: Unused import - com.amazonaws.regions.RegionUtils.
[ERROR] src/test/java/org/apache/spark/streaming/kinesis/JavaKinesisStreamSuite.java:[94] (sizes) LineLength: Line is longer than 100 characters (found 103).
[ERROR] src/main/java/org/apache/spark/examples/ml/JavaTokenizerExample.java:[30,8] (imports) UnusedImports: Unused import - org.apache.spark.sql.api.java.UDF1.
[ERROR] src/main/java/org/apache/spark/examples/ml/JavaTokenizerExample.java:[72] (sizes) LineLength: Line is longer than 100 characters (found 104).
[ERROR] src/main/java/org/apache/spark/examples/mllib/JavaRankingMetricsExample.java:[121] (sizes) LineLength: Line is longer than 100 characters (found 101).
[ERROR] src/main/java/org/apache/spark/examples/sql/JavaSQLDataSourceExample.java:[28,8] (imports) UnusedImports: Unused import - org.apache.spark.api.java.JavaRDD.
[ERROR] src/main/java/org/apache/spark/examples/sql/JavaSQLDataSourceExample.java:[29,8] (imports) UnusedImports: Unused import - org.apache.spark.api.java.JavaSparkContext.
```
## How was this patch tested?
Manually via
```bash
./dev/lint-java
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17072 from HyukjinKwon/java-lint.
## What changes were proposed in this pull request?
currently if multiple streaming queries listeners exists, when a QueryTerminatedEvent is triggered, only one of the listeners will be invoked while the rest of the listeners will ignore the event.
this is caused since the the streaming queries listeners bus holds a set of running queries ids and when a termination event is triggered, after the first listeners is handling the event, the terminated query id is being removed from the set.
in this PR, the query id will be removed from the set only after all the listeners handles the event
## How was this patch tested?
a test with multiple listeners has been added to StreamingQueryListenerSuite
Author: Eyal Zituny <eyal.zituny@equalum.io>
Closes#16991 from eyalzit/master.
## What changes were proposed in this pull request?
After adding the tests for subquery, we now have multiple level of directories under "sql-tests/inputs". Some times on Mac while using Finder application it creates the meta data files called ".DS_Store". When these files are present at different levels in directory hierarchy, we get duplicate test exception while running the tests as we just use the file name as the test case name. In this PR, we use the relative file path from the base directory along with the test file as the test name. Also after this change, we can have the same test file name under different directory like exists/basic.sql , in/basic.sql. Here is the truncated output of the test run after the change.
```SQL
info] SQLQueryTestSuite:
[info] - arithmetic.sql (5 seconds, 235 milliseconds)
[info] - array.sql (536 milliseconds)
[info] - blacklist.sql !!! IGNORED !!!
[info] - cast.sql (550 milliseconds)
....
....
....
[info] - union.sql (315 milliseconds)
[info] - subquery/.DS_Store !!! IGNORED !!!
[info] - subquery/exists-subquery/.DS_Store !!! IGNORED !!!
[info] - subquery/exists-subquery/exists-aggregate.sql (2 seconds, 451 milliseconds)
....
....
[info] - subquery/in-subquery/in-group-by.sql (12 seconds, 264 milliseconds)
....
....
[info] - subquery/scalar-subquery/scalar-subquery-predicate.sql (7 seconds, 769 milliseconds)
[info] - subquery/scalar-subquery/scalar-subquery-select.sql (4 seconds, 119 milliseconds)
```
Since this is a simple change, i haven't created a JIRA for it.
## How was this patch tested?
Manually verified. This is change to test infrastructure
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#17060 from dilipbiswal/sqlquerytestsuite.
## What changes were proposed in this pull request?
This is a follow-up of https://github.com/apache/spark/pull/16395. It fixes some code style issues, naming issues, some missing cases in pattern match, etc.
## How was this patch tested?
existing tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17065 from cloud-fan/follow-up.
## What changes were proposed in this pull request?
In spark 1.x ,the name of ThriftServer is SparkSQL:localHostName. While the ThriftServer default name is changed to the className of HiveThfift2 , which is not appropriate.
## How was this patch tested?
manual tests
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: lvdongr <lv.dongdong@zte.com.cn>
Closes#17010 from lvdongr/ThriftserverName.
Spark executes SQL commands eagerly. It does this by creating an RDD which contains the command's results. The downside to this is that any action on this RDD triggers a Spark job which is expensive and is unnecessary.
This PR fixes this by avoiding the materialization of an `RDD` for `Command`s; it just materializes the result and puts them in a `LocalRelation`.
Added a regression test to `SQLQuerySuite`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#17027 from hvanhovell/no-job-command.
### What changes were proposed in this pull request?
As explained in Hive JIRA https://issues.apache.org/jira/browse/HIVE-12224, HOLD_DDLTIME was broken as soon as it landed. Hive 2.0 removes HOLD_DDLTIME from the API. In Spark SQL, we always set it to FALSE. Like Hive, we should also remove it from our Catalog APIs.
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17063 from gatorsmile/removalHoldDDLTime.
## What changes were proposed in this pull request?
Currently we can only check the estimated stats in logical plans by debugging. We need to provide an easier and more efficient way for developers/users.
In this pr, we add EXPLAIN COST command to show stats in the optimized logical plan.
E.g.
```
spark-sql> EXPLAIN COST select count(1) from store_returns;
...
== Optimized Logical Plan ==
Aggregate [count(1) AS count(1)#24L], Statistics(sizeInBytes=16.0 B, rowCount=1, isBroadcastable=false)
+- Project, Statistics(sizeInBytes=4.3 GB, rowCount=5.76E+8, isBroadcastable=false)
+- Relation[sr_returned_date_sk#3,sr_return_time_sk#4,sr_item_sk#5,sr_customer_sk#6,sr_cdemo_sk#7,sr_hdemo_sk#8,sr_addr_sk#9,sr_store_sk#10,sr_reason_sk#11,sr_ticket_number#12,sr_return_quantity#13,sr_return_amt#14,sr_return_tax#15,sr_return_amt_inc_tax#16,sr_fee#17,sr_return_ship_cost#18,sr_refunded_cash#19,sr_reversed_charge#20,sr_store_credit#21,sr_net_loss#22] parquet, Statistics(sizeInBytes=28.6 GB, rowCount=5.76E+8, isBroadcastable=false)
...
```
## How was this patch tested?
Add test cases.
Author: wangzhenhua <wangzhenhua@huawei.com>
Author: Zhenhua Wang <wzh_zju@163.com>
Closes#16594 from wzhfy/showStats.
## What changes were proposed in this pull request?
Fixed the line ending of `FilterEstimation.scala` (It's still using `\n\r`). Also improved the tests to cover the cases where the literals are on the left side of a binary operator.
## How was this patch tested?
Existing unit tests.
Author: Shuai Lin <linshuai2012@gmail.com>
Closes#17051 from lins05/fix-cbo-filter-file-encoding.
## What changes were proposed in this pull request?
This PR adds tests hive-hash by comparing the outputs generated against Hive 1.2.1. Following datatypes are covered by this PR:
- null
- boolean
- byte
- short
- int
- long
- float
- double
- string
- array
- map
- struct
Datatypes that I have _NOT_ covered but I will work on separately are:
- Decimal (handled separately in https://github.com/apache/spark/pull/17056)
- TimestampType
- DateType
- CalendarIntervalType
## How was this patch tested?
NA
Author: Tejas Patil <tejasp@fb.com>
Closes#17049 from tejasapatil/SPARK-17495_remaining_types.
## What changes were proposed in this pull request?
Because yarn#client will reset the `spark.yarn.keytab` configuration to point to the location in distributed file, so if user still uses the old `SparkConf` to create `SparkSession` with Hive enabled, it will read keytab from the path in distributed cached. This is OK for yarn cluster mode, but in yarn client mode where driver is running out of container, it will be failed to fetch the keytab.
So here we should avoid reseting this configuration in the `yarn#client` and only overwriting it for AM, so using `spark.yarn.keytab` could get correct keytab path no matter running in client (keytab in local fs) or cluster (keytab in distributed cache) mode.
## How was this patch tested?
Verified in security cluster.
Author: jerryshao <sshao@hortonworks.com>
Closes#16923 from jerryshao/SPARK-19038.
## What changes were proposed in this pull request?
In [SPARK-15959](https://issues.apache.org/jira/browse/SPARK-15959), we bring back the `hive.metastore.warehouse.dir` , while in the logic, when use the value of `spark.sql.warehouse.dir` to overwrite `hive.metastore.warehouse.dir` , it set it to `sparkContext.conf` which does not overwrite the value is hadoopConf, I think it should put in `sparkContext.hadoopConfiguration` and overwrite the original value of hadoopConf
https://github.com/apache/spark/blob/master/sql/core/src/main/scala/org/apache/spark/sql/internal/SharedState.scala#L64
## How was this patch tested?
N/A
Author: windpiger <songjun@outlook.com>
Closes#16996 from windpiger/hivemetawarehouseConf.
## What changes were proposed in this pull request?
We traverse predicate and evaluate the logical expressions to compute the selectivity of a FILTER operator.
## How was this patch tested?
We add a new test suite to test various logical operators.
Author: Ron Hu <ron.hu@huawei.com>
Closes#16395 from ron8hu/filterSelectivity.
## What changes were proposed in this pull request?
In SQLListener.getExecutionMetrics, driver accumulator updates don't belong to the execution should be ignored when merging all accumulator updates to prevent NoSuchElementException.
## How was this patch tested?
Updated unit test.
Author: Carson Wang <carson.wang@intel.com>
Closes#17009 from carsonwang/FixSQLMetrics.
## What changes were proposed in this pull request?
This pr added a logic to put malformed tokens into a new field when parsing CSV data in case of permissive modes. In the current master, if the CSV parser hits these malformed ones, it throws an exception below (and then a job fails);
```
Caused by: java.lang.IllegalArgumentException
at java.sql.Date.valueOf(Date.java:143)
at org.apache.spark.sql.catalyst.util.DateTimeUtils$.stringToTime(DateTimeUtils.scala:137)
at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$$anonfun$castTo$6.apply$mcJ$sp(CSVInferSchema.scala:272)
at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$$anonfun$castTo$6.apply(CSVInferSchema.scala:272)
at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$$anonfun$castTo$6.apply(CSVInferSchema.scala:272)
at scala.util.Try.getOrElse(Try.scala:79)
at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$.castTo(CSVInferSchema.scala:269)
at
```
In case that users load large CSV-formatted data, the job failure makes users get some confused. So, this fix set NULL for original columns and put malformed tokens in a new field.
## How was this patch tested?
Added tests in `CSVSuite`.
Author: Takeshi Yamamuro <yamamuro@apache.org>
Closes#16928 from maropu/SPARK-18699-2.
## What changes were proposed in this pull request?
This PR adds a special streaming deduplication operator to support `dropDuplicates` with `aggregation` and watermark. It reuses the `dropDuplicates` API but creates new logical plan `Deduplication` and new physical plan `DeduplicationExec`.
The following cases are supported:
- one or multiple `dropDuplicates()` without aggregation (with or without watermark)
- `dropDuplicates` before aggregation
Not supported cases:
- `dropDuplicates` after aggregation
Breaking changes:
- `dropDuplicates` without aggregation doesn't work with `complete` or `update` mode.
## How was this patch tested?
The new unit tests.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16970 from zsxwing/dedup.
## What changes were proposed in this pull request?
This PR is a small follow-up on https://github.com/apache/spark/pull/16804. This PR also adds support for nested char/varchar fields in orc.
## How was this patch tested?
I have added a regression test to the OrcSourceSuite.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#17030 from hvanhovell/SPARK-19459-follow-up.
## What changes were proposed in this pull request?
This pr fixed a class-cast exception below;
```
scala> spark.range(10).selectExpr("cast (id as decimal) as x").selectExpr("percentile(x, 0.5)").collect()
java.lang.ClassCastException: org.apache.spark.sql.types.Decimal cannot be cast to java.lang.Number
at org.apache.spark.sql.catalyst.expressions.aggregate.Percentile.update(Percentile.scala:141)
at org.apache.spark.sql.catalyst.expressions.aggregate.Percentile.update(Percentile.scala:58)
at org.apache.spark.sql.catalyst.expressions.aggregate.TypedImperativeAggregate.update(interfaces.scala:514)
at org.apache.spark.sql.execution.aggregate.AggregationIterator$$anonfun$1$$anonfun$applyOrElse$1.apply(AggregationIterator.scala:171)
at org.apache.spark.sql.execution.aggregate.AggregationIterator$$anonfun$1$$anonfun$applyOrElse$1.apply(AggregationIterator.scala:171)
at org.apache.spark.sql.execution.aggregate.AggregationIterator$$anonfun$generateProcessRow$1.apply(AggregationIterator.scala:187)
at org.apache.spark.sql.execution.aggregate.AggregationIterator$$anonfun$generateProcessRow$1.apply(AggregationIterator.scala:181)
at org.apache.spark.sql.execution.aggregate.ObjectAggregationIterator.processInputs(ObjectAggregationIterator.scala:151)
at org.apache.spark.sql.execution.aggregate.ObjectAggregationIterator.<init>(ObjectAggregationIterator.scala:78)
at org.apache.spark.sql.execution.aggregate.ObjectHashAggregateExec$$anonfun$doExecute$1$$anonfun$2.apply(ObjectHashAggregateExec.scala:109)
at
```
This fix simply converts catalyst values (i.e., `Decimal`) into scala ones by using `CatalystTypeConverters`.
## How was this patch tested?
Added a test in `DataFrameSuite`.
Author: Takeshi Yamamuro <yamamuro@apache.org>
Closes#17028 from maropu/SPARK-19691.
## What changes were proposed in this pull request?
This pr comes from #16928 and fixed a json behaviour along with the CSV one.
## How was this patch tested?
Added tests in `JsonSuite`.
Author: Takeshi Yamamuro <yamamuro@apache.org>
Closes#17023 from maropu/SPARK-19695.
## What changes were proposed in this pull request?
SPARK-15615 proposes replacing the sqlContext.read.json(rdd) with a dataset equivalent.
SPARK-15463 adds a CSV API for reading from Dataset[String] so this keeps the API consistent.
I am deprecating the existing RDD based APIs.
## How was this patch tested?
There are existing tests. I left most tests to use the existing APIs as they delegate to the new json API.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: pj.fanning <pj.fanning@workday.com>
Author: PJ Fanning <pjfanning@users.noreply.github.com>
Closes#16895 from pjfanning/SPARK-15615.
### What changes were proposed in this pull request?
Currently, if `NumPartitions` is not set in RepartitionByExpression, we will set it using `spark.sql.shuffle.partitions` during Planner. However, this is not following the general resolution process. This PR is to set it in `Parser` and then `Optimizer` can use the value for plan optimization.
### How was this patch tested?
Added a test case.
Author: Xiao Li <gatorsmile@gmail.com>
Closes#16988 from gatorsmile/resolveRepartition.
## What changes were proposed in this pull request?
This PR proposes to fix two.
**Skip a property without a getter in beans**
Currently, if we use a JavaBean without the getter as below:
```java
public static class BeanWithoutGetter implements Serializable {
private String a;
public void setA(String a) {
this.a = a;
}
}
BeanWithoutGetter bean = new BeanWithoutGetter();
List<BeanWithoutGetter> data = Arrays.asList(bean);
spark.createDataFrame(data, BeanWithoutGetter.class).show();
```
- Before
It throws an exception as below:
```
java.lang.NullPointerException
at org.spark_project.guava.reflect.TypeToken.method(TypeToken.java:465)
at org.apache.spark.sql.catalyst.JavaTypeInference$$anonfun$2.apply(JavaTypeInference.scala:126)
at org.apache.spark.sql.catalyst.JavaTypeInference$$anonfun$2.apply(JavaTypeInference.scala:125)
```
- After
```
++
||
++
||
++
```
**Supports empty bean in encoder creation**
```java
public static class EmptyBean implements Serializable {}
EmptyBean bean = new EmptyBean();
List<EmptyBean> data = Arrays.asList(bean);
spark.createDataset(data, Encoders.bean(EmptyBean.class)).show();
```
- Before
throws an exception as below:
```
java.lang.UnsupportedOperationException: Cannot infer type for class EmptyBean because it is not bean-compliant
at org.apache.spark.sql.catalyst.JavaTypeInference$.org$apache$spark$sql$catalyst$JavaTypeInference$$serializerFor(JavaTypeInference.scala:436)
at org.apache.spark.sql.catalyst.JavaTypeInference$.serializerFor(JavaTypeInference.scala:341)
```
- After
```
++
||
++
||
++
```
## How was this patch tested?
Unit test in `JavaDataFrameSuite`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17013 from HyukjinKwon/SPARK-19666.
## What changes were proposed in this pull request?
This is a small change to make GeneratorOuter always unresolved. It is mostly no-op change but makes it more clear since GeneratorOuter shouldn't survive analysis phase.
This requires also handling in ResolveAliases rule.
## How was this patch tested?
Existing generator tests.
Author: Bogdan Raducanu <bogdan@databricks.com>
Author: Reynold Xin <rxin@databricks.com>
Closes#17026 from bogdanrdc/PR16958.
### What changes were proposed in this pull request?
Bucketed table reading and writing does not need Hive support. We can move the test cases from `sql/hive` to `sql/core`. After this PR, we can improve the test case coverage. Bucket table reading and writing can be tested with and without Hive support.
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17004 from gatorsmile/mvTestCaseForBuckets.
## What changes were proposed in this pull request?
This PR proposes to fix new test failures on WIndows as below:
**Before**
```
KafkaRelationSuite:
- test late binding start offsets *** FAILED *** (7 seconds, 679 milliseconds)
Cause: java.nio.file.FileSystemException: C:\projects\spark\target\tmp\spark-4c4b0cd1-4cb7-4908-949d-1b0cc8addb50\topic-4-0\00000000000000000000.log -> C:\projects\spark\target\tmp\spark-4c4b0cd1-4cb7-4908-949d-1b0cc8addb50\topic-4-0\00000000000000000000.log.deleted: The process cannot access the file because it is being used by another process.
KafkaSourceSuite:
- deserialization of initial offset with Spark 2.1.0 *** FAILED *** (3 seconds, 542 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-97ef64fc-ae61-4ce3-ac59-287fd38bd824
- deserialization of initial offset written by Spark 2.1.0 *** FAILED *** (60 milliseconds)
java.nio.file.InvalidPathException: Illegal char <:> at index 2: /C:/projects/spark/external/kafka-0-10-sql/target/scala-2.11/test-classes/kafka-source-initial-offset-version-2.1.0.b
HiveDDLSuite:
- partitioned table should always put partition columns at the end of table schema *** FAILED *** (657 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-f1b83d09-850a-4bba-8e43-a2a28dfaa757;
DDLSuite:
- create a data source table without schema *** FAILED *** (94 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-a3f3c161-afae-4d6f-9182-e8642f77062b;
- SET LOCATION for managed table *** FAILED *** (219 milliseconds)
org.apache.spark.sql.catalyst.errors.package$TreeNodeException: execute, tree:
Exchange SinglePartit
+- *HashAggregate(keys=[], functions=[partial_count(1)], output=[count#99367L])
+- *FileScan parquet default.tbl[] Batched: true, Format: Parquet, Location: InMemoryFileIndex[file:/C:projectsspark arget mpspark-15be2f2f-4ea9-4c47-bfee-1b7b49363033], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<>
- insert data to a data source table which has a not existed location should succeed *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-34987671-e8d1-4624-ba5b-db1012e1246b;
- insert into a data source table with no existed partition location should succeed *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-4c6ccfbf-4091-4032-9fbc-3d40c58267d5;
- read data from a data source table which has a not existed location should succeed *** FAILED *** (0 milliseconds)
- read data from a data source table with no existed partition location should succeed *** FAILED *** (0 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-6af39e37-abd1-44e8-ac68-e2dfcf67a2f3;
InputOutputMetricsSuite:
- output metrics on records written *** FAILED *** (0 milliseconds)
java.lang.IllegalArgumentException: Wrong FS: file://C:\projects\spark\target\tmp\spark-cd69ee77-88f2-4202-bed6-19c0ee05ef55\InputOutputMetricsSuite, expected: file:///
- output metrics on records written - new Hadoop API *** FAILED *** (16 milliseconds)
java.lang.IllegalArgumentException: Wrong FS: file://C:\projects\spark\target\tmp\spark-b69e8fcb-047b-4de8-9cdf-5f026efb6762\InputOutputMetricsSuite, expected: file:///
```
**After**
```
KafkaRelationSuite:
- test late binding start offsets !!! CANCELED !!! (62 milliseconds)
KafkaSourceSuite:
- deserialization of initial offset with Spark 2.1.0 (5 seconds, 341 milliseconds)
- deserialization of initial offset written by Spark 2.1.0 (910 milliseconds)
HiveDDLSuite:
- partitioned table should always put partition columns at the end of table schema (2 seconds)
DDLSuite:
- create a data source table without schema (828 milliseconds)
- SET LOCATION for managed table (406 milliseconds)
- insert data to a data source table which has a not existed location should succeed (406 milliseconds)
- insert into a data source table with no existed partition location should succeed (453 milliseconds)
- read data from a data source table which has a not existed location should succeed (94 milliseconds)
- read data from a data source table with no existed partition location should succeed (265 milliseconds)
InputOutputMetricsSuite:
- output metrics on records written (172 milliseconds)
- output metrics on records written - new Hadoop API (297 milliseconds)
```
## How was this patch tested?
Fixed tests in `InputOutputMetricsSuite`, `KafkaRelationSuite`, `KafkaSourceSuite`, `DDLSuite.scala` and `HiveDDLSuite`.
Manually tested via AppVeyor as below:
`InputOutputMetricsSuite`: https://ci.appveyor.com/project/spark-test/spark/build/633-20170219-windows-test/job/ex8nvwa6tsh7rmto
`KafkaRelationSuite`: https://ci.appveyor.com/project/spark-test/spark/build/633-20170219-windows-test/job/h8dlcowew52y8ncw
`KafkaSourceSuite`: https://ci.appveyor.com/project/spark-test/spark/build/634-20170219-windows-test/job/9ybgjl7yeubxcre4
`DDLSuite`: https://ci.appveyor.com/project/spark-test/spark/build/635-20170219-windows-test
`HiveDDLSuite`: https://ci.appveyor.com/project/spark-test/spark/build/633-20170219-windows-test/job/up6o9n47er087ltb
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16999 from HyukjinKwon/windows-fix.
## What changes were proposed in this pull request?
In [SPARK-19669](0733a54a45) change the sessionState access privileges from private to public, this lead to the compile failed in TestSQLContext
this pr is a hotfix for this.
## How was this patch tested?
N/A
Author: windpiger <songjun@outlook.com>
Closes#17008 from windpiger/hotfixcompile.
## What changes were proposed in this pull request?
To ease debugging, most of Spark SQL internals have public level visibility. Two of the most important internal states, sharedState and sessionState, however, are package private. It would make more sense to open these up as well with clear documentation that they are internal.
In addition, users currently have way to set active/default SparkSession, but no way to actually get them back. We should open those up as well.
## How was this patch tested?
N/A - only visibility change.
Author: Reynold Xin <rxin@databricks.com>
Closes#17002 from rxin/SPARK-19669.
## What changes were proposed in this pull request?
In `FileFormatWriter`, we will sort the input rows by partition columns and bucket id and sort columns, if we want to write data out partitioned or bucketed.
However, if the data is already sorted, we will sort it again, which is unnecssary.
This PR removes the sorting logic in `FileFormatWriter` and use `SortExec` instead. We will not add `SortExec` if the data is already sorted.
## How was this patch tested?
I did a micro benchmark manually
```
val df = spark.range(10000000).select($"id", $"id" % 10 as "part").sort("part")
spark.time(df.write.partitionBy("part").parquet("/tmp/test"))
```
The result was about 6.4 seconds before this PR, and is 5.7 seconds afterwards.
close https://github.com/apache/spark/pull/16724
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16898 from cloud-fan/writer.
## What changes were proposed in this pull request?
Convert tests to use Java 8 lambdas, and modest related fixes to surrounding code.
## How was this patch tested?
Jenkins tests
Author: Sean Owen <sowen@cloudera.com>
Closes#16964 from srowen/SPARK-19534.
## What changes were proposed in this pull request?
`askSync` is already added in `RpcEndpointRef` (see SPARK-19347 and https://github.com/apache/spark/pull/16690#issuecomment-276850068) and `askWithRetry` is marked as deprecated.
As mentioned SPARK-18113(https://github.com/apache/spark/pull/16503#event-927953218):
>askWithRetry is basically an unneeded API, and a leftover from the akka days that doesn't make sense anymore. It's prone to cause deadlocks (exactly because it's blocking), it imposes restrictions on the caller (e.g. idempotency) and other things that people generally don't pay that much attention to when using it.
Since `askWithRetry` is just used inside spark and not in user logic. It might make sense to replace all of them with `askSync`.
## How was this patch tested?
This PR doesn't change code logic, existing unit test can cover.
Author: jinxing <jinxing@meituan.com>
Closes#16790 from jinxing64/SPARK-19450.
## What changes were proposed in this pull request?
The Range was modified to produce "recordsRead" metric instead of "generated rows". The tests were updated and partially moved to SQLMetricsSuite.
## How was this patch tested?
Unit tests.
Author: Ala Luszczak <ala@databricks.com>
Closes#16960 from ala/range-records-read.
## What changes were proposed in this pull request?
The streaming thread in StreamExecution uses the following ways to check if it should exit:
- Catch an InterruptException.
- `StreamExecution.state` is TERMINATED.
When starting and stopping a query quickly, the above two checks may both fail:
- Hit [HADOOP-14084](https://issues.apache.org/jira/browse/HADOOP-14084) and swallow InterruptException
- StreamExecution.stop is called before `state` becomes `ACTIVE`. Then [runBatches](dcc2d540a5/sql/core/src/main/scala/org/apache/spark/sql/execution/streaming/StreamExecution.scala (L252)) changes the state from `TERMINATED` to `ACTIVE`.
If the above cases both happen, the query will hang forever.
This PR changes `state` to `AtomicReference` and uses`compareAndSet` to make sure we only change the state from `INITIALIZING` to `ACTIVE`. It also removes the `runUninterruptibly` hack from ``HDFSMetadata`, because HADOOP-14084 won't cause any problem after we fix the race condition.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16947 from zsxwing/SPARK-19617.
## What changes were proposed in this pull request?
Radix sort require that half of array as free (as temporary space), so we use 0.5 as the scale factor to make sure that BytesToBytesMap will not have more items than 1/2 of capacity. Turned out this is not true, the current implementation of append() could leave 1 more item than the threshold (1/2 of capacity) in the array, which break the requirement of radix sort (fail the assert in 2.2, or fail to insert into InMemorySorter in 2.1).
This PR fix the off-by-one bug in BytesToBytesMap.
This PR also fix a bug that the array will never grow if it fail to grow once (stay as initial capacity), introduced by #15722 .
## How was this patch tested?
Added regression test.
Author: Davies Liu <davies@databricks.com>
Closes#16844 from davies/off_by_one.
## What changes were proposed in this pull request?
We only notify `QueryExecutionListener` for several `Dataset` operations, e.g. collect, take, etc. We should also do the notification for `DataFrameWriter` operations.
## How was this patch tested?
new regression test
close https://github.com/apache/spark/pull/16664
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16962 from cloud-fan/insert.
## What changes were proposed in this pull request?
If a new option `wholeFile` is set to `true` the JSON reader will parse each file (instead of a single line) as a value. This is done with Jackson streaming and it should be capable of parsing very large documents, assuming the row will fit in memory.
Because the file is not buffered in memory the corrupt record handling is also slightly different when `wholeFile` is enabled: the corrupt column will contain the filename instead of the literal JSON if there is a parsing failure. It would be easy to extend this to add the parser location (line, column and byte offsets) to the output if desired.
These changes have allowed types other than `String` to be parsed. Support for `UTF8String` and `Text` have been added (alongside `String` and `InputFormat`) and no longer require a conversion to `String` just for parsing.
I've also included a few other changes that generate slightly better bytecode and (imo) make it more obvious when and where boxing is occurring in the parser. These are included as separate commits, let me know if they should be flattened into this PR or moved to a new one.
## How was this patch tested?
New and existing unit tests. No performance or load tests have been run.
Author: Nathan Howell <nhowell@godaddy.com>
Closes#16386 from NathanHowell/SPARK-18352.
## What changes were proposed in this pull request?
1, check the behavior with illegal `quantiles` and `relativeError`
2, add tests for `relativeError` > 1
3, update tests for `null` data
4, update some docs for javadoc8
## How was this patch tested?
local test in spark-shell
Author: Zheng RuiFeng <ruifengz@foxmail.com>
Author: Ruifeng Zheng <ruifengz@foxmail.com>
Closes#16776 from zhengruifeng/fix_approxQuantile.
- Move external/java8-tests tests into core, streaming, sql and remove
- Remove MaxPermGen and related options
- Fix some reflection / TODOs around Java 8+ methods
- Update doc references to 1.7/1.8 differences
- Remove Java 7/8 related build profiles
- Update some plugins for better Java 8 compatibility
- Fix a few Java-related warnings
For the future:
- Update Java 8 examples to fully use Java 8
- Update Java tests to use lambdas for simplicity
- Update Java internal implementations to use lambdas
## How was this patch tested?
Existing tests
Author: Sean Owen <sowen@cloudera.com>
Closes#16871 from srowen/SPARK-19493.
## What changes were proposed in this pull request?
Jira: https://issues.apache.org/jira/browse/SPARK-19618
Moved the check for validating number of buckets from `DataFrameWriter` to `BucketSpec` creation
## How was this patch tested?
- Added more unit tests
Author: Tejas Patil <tejasp@fb.com>
Closes#16948 from tejasapatil/SPARK-19618_max_buckets.
## What changes were proposed in this pull request?
SPARK-19464 removed support for Hadoop 2.5 and earlier, so we can do some cleanup for HDFSMetadataLog.
This PR includes the following changes:
- ~~Remove the workaround codes for HADOOP-10622.~~ Unfortunately, there is another issue [HADOOP-14084](https://issues.apache.org/jira/browse/HADOOP-14084) that prevents us from removing the workaround codes.
- Remove unnecessary `writer: (T, OutputStream) => Unit` and just call `serialize` directly.
- Remove catching FileNotFoundException.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16932 from zsxwing/metadata-cleanup.
## What changes were proposed in this pull request?
This is a follow-up pr of #16308.
This pr enables timezone support in CSV/JSON parsing.
We should introduce `timeZone` option for CSV/JSON datasources (the default value of the option is session local timezone).
The datasources should use the `timeZone` option to format/parse to write/read timestamp values.
Notice that while reading, if the timestampFormat has the timezone info, the timezone will not be used because we should respect the timezone in the values.
For example, if you have timestamp `"2016-01-01 00:00:00"` in `GMT`, the values written with the default timezone option, which is `"GMT"` because session local timezone is `"GMT"` here, are:
```scala
scala> spark.conf.set("spark.sql.session.timeZone", "GMT")
scala> val df = Seq(new java.sql.Timestamp(1451606400000L)).toDF("ts")
df: org.apache.spark.sql.DataFrame = [ts: timestamp]
scala> df.show()
+-------------------+
|ts |
+-------------------+
|2016-01-01 00:00:00|
+-------------------+
scala> df.write.json("/path/to/gmtjson")
```
```sh
$ cat /path/to/gmtjson/part-*
{"ts":"2016-01-01T00:00:00.000Z"}
```
whereas setting the option to `"PST"`, they are:
```scala
scala> df.write.option("timeZone", "PST").json("/path/to/pstjson")
```
```sh
$ cat /path/to/pstjson/part-*
{"ts":"2015-12-31T16:00:00.000-08:00"}
```
We can properly read these files even if the timezone option is wrong because the timestamp values have timezone info:
```scala
scala> val schema = new StructType().add("ts", TimestampType)
schema: org.apache.spark.sql.types.StructType = StructType(StructField(ts,TimestampType,true))
scala> spark.read.schema(schema).json("/path/to/gmtjson").show()
+-------------------+
|ts |
+-------------------+
|2016-01-01 00:00:00|
+-------------------+
scala> spark.read.schema(schema).option("timeZone", "PST").json("/path/to/gmtjson").show()
+-------------------+
|ts |
+-------------------+
|2016-01-01 00:00:00|
+-------------------+
```
And even if `timezoneFormat` doesn't contain timezone info, we can properly read the values with setting correct timezone option:
```scala
scala> df.write.option("timestampFormat", "yyyy-MM-dd'T'HH:mm:ss").option("timeZone", "JST").json("/path/to/jstjson")
```
```sh
$ cat /path/to/jstjson/part-*
{"ts":"2016-01-01T09:00:00"}
```
```scala
// wrong result
scala> spark.read.schema(schema).option("timestampFormat", "yyyy-MM-dd'T'HH:mm:ss").json("/path/to/jstjson").show()
+-------------------+
|ts |
+-------------------+
|2016-01-01 09:00:00|
+-------------------+
// correct result
scala> spark.read.schema(schema).option("timestampFormat", "yyyy-MM-dd'T'HH:mm:ss").option("timeZone", "JST").json("/path/to/jstjson").show()
+-------------------+
|ts |
+-------------------+
|2016-01-01 00:00:00|
+-------------------+
```
This pr also makes `JsonToStruct` and `StructToJson` `TimeZoneAwareExpression` to be able to evaluate values with timezone option.
## How was this patch tested?
Existing tests and added some tests.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#16750 from ueshin/issues/SPARK-18937.
## What changes were proposed in this pull request?
when we insert data into a datasource table use `sqlText`, and the table has an not exists location,
this will throw an Exception.
example:
```
spark.sql("create table t(a string, b int) using parquet")
spark.sql("alter table t set location '/xx'")
spark.sql("insert into table t select 'c', 1")
```
Exception:
```
com.google.common.util.concurrent.UncheckedExecutionException: org.apache.spark.sql.AnalysisException: Path does not exist: /xx;
at com.google.common.cache.LocalCache$LocalLoadingCache.getUnchecked(LocalCache.java:4814)
at com.google.common.cache.LocalCache$LocalLoadingCache.apply(LocalCache.java:4830)
at org.apache.spark.sql.hive.HiveMetastoreCatalog.lookupRelation(HiveMetastoreCatalog.scala:122)
at org.apache.spark.sql.hive.HiveSessionCatalog.lookupRelation(HiveSessionCatalog.scala:69)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$.org$apache$spark$sql$catalyst$analysis$Analyzer$ResolveRelations$$lookupTableFromCatalog(Analyzer.scala:456)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$$anonfun$apply$8.applyOrElse(Analyzer.scala:465)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$$anonfun$apply$8.applyOrElse(Analyzer.scala:463)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolveOperators$1.apply(LogicalPlan.scala:61)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolveOperators$1.apply(LogicalPlan.scala:61)
at org.apache.spark.sql.catalyst.trees.CurrentOrigin$.withOrigin(TreeNode.scala:70)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.resolveOperators(LogicalPlan.scala:60)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$.apply(Analyzer.scala:463)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveRelations$.apply(Analyzer.scala:453)
```
As discussed following comments, we should unify the action when we reading from or writing to a datasource table with a non pre-existing locaiton:
1. reading from a datasource table: return 0 rows
2. writing to a datasource table: write data successfully
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16672 from windpiger/insertNotExistLocation.
Move `SQLViewSuite` from `sql/hive` to `sql/core`, so we can test the view supports without hive metastore. Also moved the test cases that specified to hive to `HiveSQLViewSuite`.
Improve the test coverage of SQLViewSuite, cover the following cases:
1. view resolution(possibly a referenced table/view have changed after the view creation);
2. handle a view with user specified column names;
3. improve the test cases for a nested view.
Also added a test case for cyclic view reference, which is a known issue that is not fixed yet.
N/A
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16674 from jiangxb1987/view-test.
## What changes were proposed in this pull request?
Add coalesce on DataFrame for down partitioning without shuffle and coalesce on Column
## How was this patch tested?
manual, unit tests
Author: Felix Cheung <felixcheung_m@hotmail.com>
Closes#16739 from felixcheung/rcoalesce.
## What changes were proposed in this pull request?
A follow-up to disallow space as the delimiter in broadcast hint.
## How was this patch tested?
Jenkins test.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#16941 from viirya/disallow-space-delimiter.
## What changes were proposed in this pull request?
This PR adds the third and final set of tests for EXISTS subquery.
File name | Brief description
------------------------| -----------------
exists-cte.sql |Tests Exist subqueries referencing CTE
exists-joins-and-set-ops.sql|Tests Exists subquery used in Joins (Both when joins occurs in outer and suquery blocks)
DB2 results are attached here as reference :
[exists-cte-db2.txt](https://github.com/apache/spark/files/752091/exists-cte-db2.txt)
[exists-joins-and-set-ops-db2.txt](https://github.com/apache/spark/files/753283/exists-joins-and-set-ops-db2.txt) (updated)
## How was this patch tested?
The test result is compared with the result run from another SQL engine (in this case is IBM DB2). If the result are equivalent, we assume the result is correct.
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#16802 from dilipbiswal/exists-pr3.
## What changes were proposed in this pull request?
This PR adds new test cases for scalar subquery in predicate context
## How was this patch tested?
The test result is compared with the result run from another SQL engine (in this case is IBM DB2). If the result are equivalent, we assume the result is correct.
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#16798 from nsyca/18873-2.
## What changes were proposed in this pull request?
Support cardinality estimation and stats propagation for all join types.
Limitations:
- For inner/outer joins without any equal condition, we estimate it like cartesian product.
- For left semi/anti joins, since we can't apply the heuristics for inner join to it, for now we just propagate the statistics from left side. We should support them when other advanced stats (e.g. histograms) are available in spark.
## How was this patch tested?
Add a new test suite.
Author: Zhenhua Wang <wzh_zju@163.com>
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#16228 from wzhfy/joinEstimate.
## What changes were proposed in this pull request?
We will throw an exception if bucket columns are part of partition columns, this should also apply to sort columns.
This PR also move the checking logic from `DataFrameWriter` to `PreprocessTableCreation`, which is the central place for checking and normailization.
## How was this patch tested?
updated test.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16931 from cloud-fan/bucket.
## What changes were proposed in this pull request?
A small update to https://github.com/apache/spark/pull/16925
1. Rename SubstituteHints -> ResolveHints to be more consistent with rest of the rules.
2. Added more documentation in the rule and be more defensive / future proof to skip views as well as CTEs.
## How was this patch tested?
This pull request contains no real logic change and all behavior should be covered by existing tests.
Author: Reynold Xin <rxin@databricks.com>
Closes#16939 from rxin/SPARK-16475.
## What changes were proposed in this pull request?
Implementing a mapping between executionId and corresponding QueryExecution in SQLExecution.
## How was this patch tested?
Adds a unit test.
Author: Ala Luszczak <ala@databricks.com>
Closes#16940 from ala/execution-id.
## What changes were proposed in this pull request?
The reason for test failure is that the property “oracle.jdbc.mapDateToTimestamp” set by the test was getting converted into all lower case. Oracle database expects this property in case-sensitive manner.
This test was passing in previous releases because connection properties were sent as user specified for the test case scenario. Fixes to handle all option uniformly in case-insensitive manner, converted the JDBC connection properties also to lower case.
This PR enhances CaseInsensitiveMap to keep track of input case-sensitive keys , and uses those when creating connection properties that are passed to the JDBC connection.
Alternative approach PR https://github.com/apache/spark/pull/16847 is to pass original input keys to JDBC data source by adding check in the Data source class and handle case-insensitivity in the JDBC source code.
## How was this patch tested?
Added new test cases to JdbcSuite , and OracleIntegrationSuite. Ran docker integration tests passed on my laptop, all tests passed successfully.
Author: sureshthalamati <suresh.thalamati@gmail.com>
Closes#16891 from sureshthalamati/jdbc_case_senstivity_props_fix-SPARK-19318.
## What changes were proposed in this pull request?
This pull request introduces a simple hint infrastructure to SQL and implements broadcast join hint using the infrastructure.
The hint syntax looks like the following:
```
SELECT /*+ BROADCAST(t) */ * FROM t
```
For broadcast hint, we accept "BROADCAST", "BROADCASTJOIN", and "MAPJOIN", and a sequence of relation aliases can be specified in the hint. A broadcast hint plan node will be inserted on top of any relation (that is not aliased differently), subquery, or common table expression that match the specified name.
The hint resolution works by recursively traversing down the query plan to find a relation or subquery that matches one of the specified broadcast aliases. The traversal does not go past beyond any existing broadcast hints, subquery aliases. This rule happens before common table expressions.
Note that there was an earlier patch in https://github.com/apache/spark/pull/14426. This is a rewrite of that patch, with different semantics and simpler test cases.
## How was this patch tested?
Added a new unit test suite for the broadcast hint rule (SubstituteHintsSuite) and new test cases for parser change (in PlanParserSuite). Also added end-to-end test case in BroadcastSuite.
Author: Reynold Xin <rxin@databricks.com>
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16925 from rxin/SPARK-16475-broadcast-hint.
### What changes were proposed in this pull request?
SQLGen is removed. Thus, the generated files should be removed too.
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Closes#16921 from gatorsmile/removeSQLGenFiles.
## What changes were proposed in this pull request?
Current `CREATE TEMPORARY TABLE ... ` is deprecated and recommend users to use `CREATE TEMPORARY VIEW ...` And it does not support `IF NOT EXISTS `clause. However, if there is an existing temporary view defined, it is possible to unintentionally replace this existing view by issuing `CREATE TEMPORARY TABLE ...` with the same table/view name.
This PR is to disallow `CREATE TEMPORARY TABLE ...` with an existing view name.
Under the cover, `CREATE TEMPORARY TABLE ...` will be changed to create temporary view, however, passing in a flag `replace=false`, instead of currently `true`. So when creating temporary view under the cover, if there is existing view with the same name, the operation will be blocked.
## How was this patch tested?
New unit test case is added and updated some existing test cases to adapt the new behavior
Author: Xin Wu <xinwu@us.ibm.com>
Closes#16878 from xwu0226/block_duplicate_temp_table.
What changes were proposed in this pull request?
Support CREATE [EXTERNAL] TABLE LIKE LOCATION... syntax for Hive serde and datasource tables.
In this PR,we follow SparkSQL design rules :
supporting create table like view or physical table or temporary view with location.
creating a table with location,this table will be an external table other than managed table.
How was this patch tested?
Add new test cases and update existing test cases
Author: ouyangxiaochen <ou.yangxiaochen@zte.com.cn>
Closes#16868 from ouyangxiaochen/spark19115.
## What changes were proposed in this pull request?
This PR proposes to support type coercion between `ArrayType`s where the element types are compatible.
**Before**
```
Seq(Array(1)).toDF("a").selectExpr("greatest(a, array(1D))")
org.apache.spark.sql.AnalysisException: cannot resolve 'greatest(`a`, array(1.0D))' due to data type mismatch: The expressions should all have the same type, got GREATEST(array<int>, array<double>).; line 1 pos 0;
Seq(Array(1)).toDF("a").selectExpr("least(a, array(1D))")
org.apache.spark.sql.AnalysisException: cannot resolve 'least(`a`, array(1.0D))' due to data type mismatch: The expressions should all have the same type, got LEAST(array<int>, array<double>).; line 1 pos 0;
sql("SELECT * FROM values (array(0)), (array(1D)) as data(a)")
org.apache.spark.sql.AnalysisException: incompatible types found in column a for inline table; line 1 pos 14
Seq(Array(1)).toDF("a").union(Seq(Array(1D)).toDF("b"))
org.apache.spark.sql.AnalysisException: Union can only be performed on tables with the compatible column types. ArrayType(DoubleType,false) <> ArrayType(IntegerType,false) at the first column of the second table;;
sql("SELECT IF(1=1, array(1), array(1D))")
org.apache.spark.sql.AnalysisException: cannot resolve '(IF((1 = 1), array(1), array(1.0D)))' due to data type mismatch: differing types in '(IF((1 = 1), array(1), array(1.0D)))' (array<int> and array<double>).; line 1 pos 7;
```
**After**
```scala
Seq(Array(1)).toDF("a").selectExpr("greatest(a, array(1D))")
res5: org.apache.spark.sql.DataFrame = [greatest(a, array(1.0)): array<double>]
Seq(Array(1)).toDF("a").selectExpr("least(a, array(1D))")
res6: org.apache.spark.sql.DataFrame = [least(a, array(1.0)): array<double>]
sql("SELECT * FROM values (array(0)), (array(1D)) as data(a)")
res8: org.apache.spark.sql.DataFrame = [a: array<double>]
Seq(Array(1)).toDF("a").union(Seq(Array(1D)).toDF("b"))
res10: org.apache.spark.sql.Dataset[org.apache.spark.sql.Row] = [a: array<double>]
sql("SELECT IF(1=1, array(1), array(1D))")
res15: org.apache.spark.sql.DataFrame = [(IF((1 = 1), array(1), array(1.0))): array<double>]
```
## How was this patch tested?
Unit tests in `TypeCoercion` and Jenkins tests and
building with scala 2.10
```scala
./dev/change-scala-version.sh 2.10
./build/mvn -Pyarn -Phadoop-2.4 -Dscala-2.10 -DskipTests clean package
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16777 from HyukjinKwon/SPARK-19435.
## What changes were proposed in this pull request?
When a query uses a temp checkpoint dir, it's better to delete it if it's stopped without errors.
## How was this patch tested?
New unit tests.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16880 from zsxwing/delete-temp-checkpoint.
Improve the test for SPARK-19514, so that it's clear which stage is being cancelled.
Author: Ala Luszczak <ala@databricks.com>
Closes#16914 from ala/fix-range-test.
## What changes were proposed in this pull request?
This PR proposes to fix the error message when some data types are compatible and others are not in set/union operation.
Currently, the code below:
```scala
Seq((1,("a", 1))).toDF.union(Seq((1L,("a", "b"))).toDF)
```
throws an exception saying `LongType` and `IntegerType` are incompatible types. It should say something about `StructType`s with more readable format as below:
**Before**
```
Union can only be performed on tables with the compatible column types.
LongType <> IntegerType at the first column of the second table;;
```
**After**
```
Union can only be performed on tables with the compatible column types.
struct<_1:string,_2:string> <> struct<_1:string,_2:int> at the second column of the second table;;
```
*I manually inserted a newline in the messages above for readability only in this PR description.
## How was this patch tested?
Unit tests in `AnalysisErrorSuite`, manual tests and build wth Scala 2.10.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16882 from HyukjinKwon/SPARK-19544.
## What changes were proposed in this pull request?
Currently the udf `to_date` has different return value with an invalid date input.
```
SELECT to_date('2015-07-22', 'yyyy-dd-MM') -> return `2016-10-07`
SELECT to_date('2014-31-12') -> return null
```
As discussed in JIRA [SPARK-19496](https://issues.apache.org/jira/browse/SPARK-19496), we should return null in both situations when the input date is invalid
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16870 from windpiger/to_date.
## What changes were proposed in this pull request?
There are some duplicate functions between `HiveClientImpl` and `HiveUtils`, we can merge them to one place. such as: `toHiveTable` 、`toHivePartition`、`fromHivePartition`.
And additional modify is change `MetastoreRelation.attributes` to `MetastoreRelation.dataColKeys`
https://github.com/apache/spark/blob/master/sql/hive/src/main/scala/org/apache/spark/sql/hive/MetastoreRelation.scala#L234
## How was this patch tested?
N/A
Author: windpiger <songjun@outlook.com>
Closes#16787 from windpiger/todoInMetaStoreRelation.
## What changes were proposed in this pull request?
This PR adds support for Hive UDFs that return fully typed java Lists or Maps, for example `List<String>` or `Map<String, Integer>`. It is also allowed to nest these structures, for example `Map<String, List<Integer>>`. Raw collections or collections using wildcards are still not supported, and cannot be supported due to the lack of type information.
## How was this patch tested?
Modified existing tests in `HiveUDFSuite`, and I have added test cases for raw collection and collection using wildcards.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16886 from hvanhovell/SPARK-19548.
## What changes were proposed in this pull request?
This change add an optional argument to `SparkContext.cancelStage()` and `SparkContext.cancelJob()` functions, which allows the caller to provide exact reason for the cancellation.
## How was this patch tested?
Adds unit test.
Author: Ala Luszczak <ala@databricks.com>
Closes#16887 from ala/cancel.
## What changes were proposed in this pull request?
Reading from an existing ORC table which contains `char` or `varchar` columns can fail with a `ClassCastException` if the table metadata has been created using Spark. This is caused by the fact that spark internally replaces `char` and `varchar` columns with a `string` column.
This PR fixes this by adding the hive type to the `StructField's` metadata under the `HIVE_TYPE_STRING` key. This is picked up by the `HiveClient` and the ORC reader, see https://github.com/apache/spark/pull/16060 for more details on how the metadata is used.
## How was this patch tested?
Added a regression test to `OrcSourceSuite`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16804 from hvanhovell/SPARK-19459.
## What changes were proposed in this pull request?
Using from_json on a column with an empty string results in: java.util.NoSuchElementException: head of empty list.
This is because `parser.parse(input)` may return `Nil` when `input.trim.isEmpty`
## How was this patch tested?
Regression test in `JsonExpressionsSuite`
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#16881 from brkyvz/json-fix.
## What changes were proposed in this pull request?
With the new approach of view resolution, we can get rid of SQL generation on view creation, so let's remove SQL builder for operators.
Note that, since all sql generation for operators is defined in one file (org.apache.spark.sql.catalyst.SQLBuilder), it’d be trivial to recover it in the future.
## How was this patch tested?
N/A
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16869 from jiangxb1987/SQLBuilder.
## What changes were proposed in this pull request?
Set currentVars to null in GenerateOrdering.genComparisons before genCode is called. genCode ignores INPUT_ROW if currentVars is not null and in genComparisons we want it to use INPUT_ROW.
## How was this patch tested?
Added test with 2 queries in WholeStageCodegenSuite
Author: Bogdan Raducanu <bogdan.rdc@gmail.com>
Closes#16852 from bogdanrdc/SPARK-19512.
## What changes were proposed in this pull request?
Previously range operator could not be interrupted. For example, using DAGScheduler.cancelStage(...) on a query with range might have been ineffective.
This change adds periodic checks of TaskContext.isInterrupted to codegen version, and InterruptibleOperator to non-codegen version.
I benchmarked the performance of codegen version on a sample query `spark.range(1000L * 1000 * 1000 * 10).count()` and there is no measurable difference.
## How was this patch tested?
Adds a unit test.
Author: Ala Luszczak <ala@databricks.com>
Closes#16872 from ala/SPARK-19514b.
## What changes were proposed in this pull request?
SPARK-19265 had made table relation cache general; this follow-up aims to make `tableRelationCache`'s maximum size configurable.
In order to do sanity-check, this patch also adds a `checkValue()` method to `TypedConfigBuilder`.
## How was this patch tested?
new test case: `test("conf entry: checkValue()")`
Author: Liwei Lin <lwlin7@gmail.com>
Closes#16736 from lw-lin/conf.
## What changes were proposed in this pull request?
Hive metastore is not case-preserving and keep partition columns with lower case names. If Spark SQL creates a table with upper-case partition column names using `HiveExternalCatalog`, when we rename partition, it first calls the HiveClient to renamePartition, which will create a new lower case partition path, then Spark SQL renames the lower case path to upper-case.
However, when we rename a nested path, different file systems have different behaviors. e.g. in jenkins, renaming `a=1/b=2` to `A=2/B=2` will success, but leave an empty directory `a=1`. in mac os, the renaming doesn't work as expected and result to `a=1/B=2`.
This PR renames the partition directory recursively from the first partition column in `HiveExternalCatalog`, to be most compatible with different file systems.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16837 from cloud-fan/partition.
## What changes were proposed in this pull request?
This PR adds the second set of tests for EXISTS subquery.
File name | Brief description
------------------------| -----------------
exists-aggregate.sql |Tests aggregate expressions in outer query and EXISTS subquery.
exists-having.sql|Tests HAVING clause in subquery.
exists-orderby-limit.sql|Tests EXISTS subquery support with ORDER BY and LIMIT clauses.
DB2 results are attached here as reference :
[exists-aggregate-db2.txt](https://github.com/apache/spark/files/743287/exists-aggregate-db2.txt)
[exists-having-db2.txt](https://github.com/apache/spark/files/743286/exists-having-db2.txt)
[exists-orderby-limit-db2.txt](https://github.com/apache/spark/files/743288/exists-orderby-limit-db2.txt)
## How the patch was tested.
The test result is compared with the result run from another SQL engine (in this case is IBM DB2). If the result are equivalent, we assume the result is correct.
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#16760 from dilipbiswal/exists-pr2.
### What changes were proposed in this pull request?
`table.schema` is always not empty for partitioned tables, because `table.schema` also contains the partitioned columns, even if the original table does not have any column. This PR is to fix the issue.
### How was this patch tested?
Added a test case
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16848 from gatorsmile/inferHiveSerdeSchema.
## What changes were proposed in this pull request?
After using Apache Parquet 1.8.2, `ParquetAvroCompatibilitySuite` fails on **Maven** test. It is because `org.apache.parquet.avro.AvroParquetWriter` in the test code used new `avro 1.8.0` specific class, `LogicalType`. This PR aims to fix the test dependency of `sql/core` module to use avro 1.8.0.
https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-maven-hadoop-2.7/2530/consoleFull
```
ParquetAvroCompatibilitySuite:
*** RUN ABORTED ***
java.lang.NoClassDefFoundError: org/apache/avro/LogicalType
at org.apache.parquet.avro.AvroParquetWriter.writeSupport(AvroParquetWriter.java:144)
```
## How was this patch tested?
Pass the existing test with **Maven**.
```
$ build/mvn -Pyarn -Phadoop-2.7 -Pkinesis-asl -Phive -Phive-thriftserver test
...
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 02:07 h
[INFO] Finished at: 2017-02-04T05:41:43+00:00
[INFO] Final Memory: 77M/987M
[INFO] ------------------------------------------------------------------------
```
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16795 from dongjoon-hyun/SPARK-19409-2.
## What changes were proposed in this pull request?
- Remove support for Hadoop 2.5 and earlier
- Remove reflection and code constructs only needed to support multiple versions at once
- Update docs to reflect newer versions
- Remove older versions' builds and profiles.
## How was this patch tested?
Existing tests
Author: Sean Owen <sowen@cloudera.com>
Closes#16810 from srowen/SPARK-19464.
## What changes were proposed in this pull request?
when csv infer schema, it does not use user defined csvoptions to parse the field, such as `inf`, `-inf` which are should be parsed to DoubleType
this pr add `options.nanValue`, `options.negativeInf`, `options.positiveIn` to check if the field is a DoubleType
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16834 from windpiger/fixinferInfSchemaCsv.
## What changes were proposed in this pull request?
This PR adds new test cases for scalar subquery in SELECT clause.
## How was this patch tested?
The test result is compared with the result run from another SQL engine (in this case is IBM DB2). If the result are equivalent, we assume the result is correct.
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#16712 from nsyca/18873.
## What changes were proposed in this pull request?
addBatch method in Sink trait is supposed to be a synchronous method to coordinate with the fault-tolerance design in StreamingExecution (being different with the compute() method in DStream)
We need to add more notes in the comments of this method to remind the developers
## How was this patch tested?
existing tests
Author: CodingCat <zhunansjtu@gmail.com>
Closes#16840 from CodingCat/SPARK-19499.
## What changes were proposed in this pull request?
`mapGroupsWithState` is a new API for arbitrary stateful operations in Structured Streaming, similar to `DStream.mapWithState`
*Requirements*
- Users should be able to specify a function that can do the following
- Access the input row corresponding to a key
- Access the previous state corresponding to a key
- Optionally, update or remove the state
- Output any number of new rows (or none at all)
*Proposed API*
```
// ------------ New methods on KeyValueGroupedDataset ------------
class KeyValueGroupedDataset[K, V] {
// Scala friendly
def mapGroupsWithState[S: Encoder, U: Encoder](func: (K, Iterator[V], KeyedState[S]) => U)
def flatMapGroupsWithState[S: Encode, U: Encoder](func: (K, Iterator[V], KeyedState[S]) => Iterator[U])
// Java friendly
def mapGroupsWithState[S, U](func: MapGroupsWithStateFunction[K, V, S, R], stateEncoder: Encoder[S], resultEncoder: Encoder[U])
def flatMapGroupsWithState[S, U](func: FlatMapGroupsWithStateFunction[K, V, S, R], stateEncoder: Encoder[S], resultEncoder: Encoder[U])
}
// ------------------- New Java-friendly function classes -------------------
public interface MapGroupsWithStateFunction<K, V, S, R> extends Serializable {
R call(K key, Iterator<V> values, state: KeyedState<S>) throws Exception;
}
public interface FlatMapGroupsWithStateFunction<K, V, S, R> extends Serializable {
Iterator<R> call(K key, Iterator<V> values, state: KeyedState<S>) throws Exception;
}
// ---------------------- Wrapper class for state data ----------------------
trait State[S] {
def exists(): Boolean
def get(): S // throws Exception is state does not exist
def getOption(): Option[S]
def update(newState: S): Unit
def remove(): Unit // exists() will be false after this
}
```
Key Semantics of the State class
- The state can be null.
- If the state.remove() is called, then state.exists() will return false, and getOption will returm None.
- After that state.update(newState) is called, then state.exists() will return true, and getOption will return Some(...).
- None of the operations are thread-safe. This is to avoid memory barriers.
*Usage*
```
val stateFunc = (word: String, words: Iterator[String, runningCount: KeyedState[Long]) => {
val newCount = words.size + runningCount.getOption.getOrElse(0L)
runningCount.update(newCount)
(word, newCount)
}
dataset // type is Dataset[String]
.groupByKey[String](w => w) // generates KeyValueGroupedDataset[String, String]
.mapGroupsWithState[Long, (String, Long)](stateFunc) // returns Dataset[(String, Long)]
```
## How was this patch tested?
New unit tests.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16758 from tdas/mapWithState.
### What changes were proposed in this pull request?
Prior to Spark 2.1, the option names are case sensitive for all the formats. Since Spark 2.1, the option key names become case insensitive except the format `Text` and `LibSVM `. This PR is to fix these issues.
Also, add a check to know whether the input option vector type is legal for `LibSVM`.
### How was this patch tested?
Added test cases
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16737 from gatorsmile/libSVMTextOptions.
## What changes were proposed in this pull request?
The optimizer tries to remove redundant alias only projections from the query plan using the `RemoveAliasOnlyProject` rule. The current rule identifies removes such a project and rewrites the project's attributes in the **entire** tree. This causes problems when parts of the tree are duplicated (for instance a self join on a temporary view/CTE) and the duplicated part contains the alias only project, in this case the rewrite will break the tree.
This PR fixes these problems by using a blacklist for attributes that are not to be moved, and by making sure that attribute remapping is only done for the parent tree, and not for unrelated parts of the query plan.
The current tree transformation infrastructure works very well if the transformation at hand requires little or a global contextual information. In this case we need to know both the attributes that were not to be moved, and we also needed to know which child attributes were modified. This cannot be done easily using the current infrastructure, and solutions typically involves transversing the query plan multiple times (which is super slow). I have moved around some code in `TreeNode`, `QueryPlan` and `LogicalPlan`to make this much more straightforward; this basically allows you to manually traverse the tree.
This PR subsumes the following PRs by windpiger:
Closes https://github.com/apache/spark/pull/16267
Closes https://github.com/apache/spark/pull/16255
## How was this patch tested?
I have added unit tests to `RemoveRedundantAliasAndProjectSuite` and I have added integration tests to the `SQLQueryTestSuite.union` and `SQLQueryTestSuite.cte` test cases.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16757 from hvanhovell/SPARK-18609.
## What changes were proposed in this pull request?
This pull request makes SQLConf slightly more extensible by removing the visibility limitations on the build* functions.
## How was this patch tested?
N/A - there are no logic changes and everything should be covered by existing unit tests.
Author: Reynold Xin <rxin@databricks.com>
Closes#16835 from rxin/SPARK-19495.
## What changes were proposed in this pull request?
This pull request adds two new user facing functions:
- `to_date` which accepts an expression and a format and returns a date.
- `to_timestamp` which accepts an expression and a format and returns a timestamp.
For example, Given a date in format: `2016-21-05`. (YYYY-dd-MM)
### Date Function
*Previously*
```
to_date(unix_timestamp(lit("2016-21-05"), "yyyy-dd-MM").cast("timestamp"))
```
*Current*
```
to_date(lit("2016-21-05"), "yyyy-dd-MM")
```
### Timestamp Function
*Previously*
```
unix_timestamp(lit("2016-21-05"), "yyyy-dd-MM").cast("timestamp")
```
*Current*
```
to_timestamp(lit("2016-21-05"), "yyyy-dd-MM")
```
### Tasks
- [X] Add `to_date` to Scala Functions
- [x] Add `to_date` to Python Functions
- [x] Add `to_date` to SQL Functions
- [X] Add `to_timestamp` to Scala Functions
- [x] Add `to_timestamp` to Python Functions
- [x] Add `to_timestamp` to SQL Functions
- [x] Add function to R
## How was this patch tested?
- [x] Add Functions to `DateFunctionsSuite`
- Test new `ParseToTimestamp` Expression (*not necessary*)
- Test new `ParseToDate` Expression (*not necessary*)
- [x] Add test for R
- [x] Add test for Python in test.py
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: anabranch <wac.chambers@gmail.com>
Author: Bill Chambers <bill@databricks.com>
Author: anabranch <bill@databricks.com>
Closes#16138 from anabranch/SPARK-16609.
## What changes were proposed in this pull request?
This change introduces a new metric "number of generated rows". It is used exclusively for Range, which is a leaf in the query tree, yet doesn't read any input data, and therefore cannot report "recordsRead".
Additionally the way in which the metrics are reported by the JIT-compiled version of Range was changed. Previously, it was immediately reported that all the records were produced. This could be confusing for a user monitoring execution progress in the UI. Now, the metric is updated gradually.
In order to avoid negative impact on Range performance, the code generation was reworked. The values are now produced in batches in the tighter inner loop, while the metrics are updated in the outer loop.
The change also contains a number of unit tests, which should help ensure the correctness of metrics for various input sources.
## How was this patch tested?
Unit tests.
Author: Ala Luszczak <ala@databricks.com>
Closes#16829 from ala/SPARK-19447.
## What changes were proposed in this pull request?
I have a frequency distribution table with following entries
Age, No of person
21, 10
22, 15
23, 18
..
..
30, 14
Moreover it is common to have data in frequency distribution format to further calculate Percentile, Median. With current implementation
It would be very difficult and complex to find the percentile.
Therefore i am proposing enhancement to current Percentile and Approx Percentile implementation to take frequency distribution column into consideration
## How was this patch tested?
1) Enhanced /sql/catalyst/src/test/scala/org/apache/spark/sql/catalyst/expressions/aggregate/PercentileSuite.scala to cover the additional functionality
2) Run some performance benchmark test with 20 million row in local environment and did not see any performance degradation
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: gagan taneja <tanejagagan@gagans-MacBook-Pro.local>
Closes#16497 from tanejagagan/branch-18940.
## What changes were proposed in this pull request?
This PR refactors CSV schema inference path to be consistent with JSON data source and moves some filtering codes having the similar/same logics into `CSVUtils`.
It makes the methods in classes have consistent arguments with JSON ones. (this PR renames `.../json/InferSchema.scala` → `.../json/JsonInferSchema.scala`)
`CSVInferSchema` and `JsonInferSchema`
``` scala
private[csv] object CSVInferSchema {
...
def infer(
csv: Dataset[String],
caseSensitive: Boolean,
options: CSVOptions): StructType = {
...
```
``` scala
private[sql] object JsonInferSchema {
...
def infer(
json: RDD[String],
columnNameOfCorruptRecord: String,
configOptions: JSONOptions): StructType = {
...
```
These allow schema inference from `Dataset[String]` directly, meaning the similar functionalities that use `JacksonParser`/`JsonInferSchema` for JSON can be easily implemented by `UnivocityParser`/`CSVInferSchema` for CSV.
This completes refactoring CSV datasource and they are now pretty consistent.
## How was this patch tested?
Existing tests should cover this and
```
./dev/change-scala-version.sh 2.10
./build/mvn -Pyarn -Phadoop-2.4 -Dscala-2.10 -DskipTests clean package
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16680 from HyukjinKwon/SPARK-16101-schema-inference.
## What changes were proposed in this pull request?
It often happens that a complex object (struct/map/array) is created only to get elements from it in an subsequent expression. We can add an optimizer rule for this.
## How was this patch tested?
unit-tests
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Eyal Farago <eyal@nrgene.com>
Author: eyal farago <eyal.farago@gmail.com>
Closes#16043 from eyalfa/SPARK-18601.
## What changes were proposed in this pull request?
```
Caused by: java.lang.IllegalArgumentException: Wrong FS: s3a://**************/checkpoint/7b2231a3-d845-4740-bfa3-681850e5987f/metadata, expected: file:///
at org.apache.hadoop.fs.FileSystem.checkPath(FileSystem.java:649)
at org.apache.hadoop.fs.RawLocalFileSystem.pathToFile(RawLocalFileSystem.java:82)
at org.apache.hadoop.fs.RawLocalFileSystem.deprecatedGetFileStatus(RawLocalFileSystem.java:606)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileLinkStatusInternal(RawLocalFileSystem.java:824)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileStatus(RawLocalFileSystem.java:601)
at org.apache.hadoop.fs.FilterFileSystem.getFileStatus(FilterFileSystem.java:421)
at org.apache.hadoop.fs.FileSystem.exists(FileSystem.java:1426)
at org.apache.spark.sql.execution.streaming.StreamMetadata$.read(StreamMetadata.scala:51)
at org.apache.spark.sql.execution.streaming.StreamExecution.<init>(StreamExecution.scala:100)
at org.apache.spark.sql.streaming.StreamingQueryManager.createQuery(StreamingQueryManager.scala:232)
at org.apache.spark.sql.streaming.StreamingQueryManager.startQuery(StreamingQueryManager.scala:269)
at org.apache.spark.sql.streaming.DataStreamWriter.start(DataStreamWriter.scala:262)
```
Can easily replicate on spark standalone cluster by providing checkpoint location uri scheme anything other than "file://" and not overriding in config.
WorkAround --conf spark.hadoop.fs.defaultFS=s3a://somebucket or set it in sparkConf or spark-default.conf
## How was this patch tested?
existing ut
Author: uncleGen <hustyugm@gmail.com>
Closes#16815 from uncleGen/SPARK-19407.
### What changes were proposed in this pull request?
The removed codes for `IN` are not reachable, because the previous rule `InConversion` already resolves the type coercion issues.
### How was this patch tested?
N/A
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16783 from gatorsmile/typeCoercionIn.
## What changes were proposed in this pull request?
The SQL parser can mistake a `WHEN (...)` used in `CASE` for a function call. This happens in cases like the following:
```sql
select case when (1) + case when 1 > 0 then 1 else 0 end = 2 then 1 else 0 end
from tb
```
This PR fixes this by re-organizing the case related parsing rules.
## How was this patch tested?
Added a regression test to the `ExpressionParserSuite`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16821 from hvanhovell/SPARK-19472.
## What changes were proposed in this pull request?
The current way of resolving `InsertIntoTable` and `CreateTable` is convoluted: sometimes we replace them with concrete implementation commands during analysis, sometimes during planning phase.
And the error checking logic is also a mess: we may put it in extended analyzer rules, or extended checking rules, or `CheckAnalysis`.
This PR simplifies the data source analysis:
1. `InsertIntoTable` and `CreateTable` are always unresolved and need to be replaced by concrete implementation commands during analysis.
2. The error checking logic is mainly in 2 rules: `PreprocessTableCreation` and `PreprocessTableInsertion`.
## How was this patch tested?
existing test.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16269 from cloud-fan/ddl.
## What changes were proposed in this pull request?
This PR proposes to enable the tests for Parquet filter pushdown with binary and string.
This was disabled in https://github.com/apache/spark/pull/16106 due to Parquet's issue but it is now revived in https://github.com/apache/spark/pull/16791 after upgrading Parquet to 1.8.2.
## How was this patch tested?
Manually tested `ParquetFilterSuite` via IDE.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16817 from HyukjinKwon/SPARK-17213.
## What changes were proposed in this pull request?
We've already upgraded parquet-mr to 1.8.2. This PR does some further cleanup by removing a workaround of PARQUET-686 and a hack due to PARQUET-363 and PARQUET-278. All three Parquet issues are fixed in parquet-mr 1.8.2.
## How was this patch tested?
Existing unit tests.
Author: Cheng Lian <lian@databricks.com>
Closes#16791 from liancheng/parquet-1.8.2-cleanup.
### What changes were proposed in this pull request?
So far, we allow users to create a table with an empty schema: `CREATE TABLE tab1`. This could break many code paths if we enable it. Thus, we should follow Hive to block it.
For Hive serde tables, some serde libraries require the specified schema and record it in the metastore. To get the list, we need to check `hive.serdes.using.metastore.for.schema,` which contains a list of serdes that require user-specified schema. The default values are
- org.apache.hadoop.hive.ql.io.orc.OrcSerde
- org.apache.hadoop.hive.serde2.lazy.LazySimpleSerDe
- org.apache.hadoop.hive.serde2.columnar.ColumnarSerDe
- org.apache.hadoop.hive.serde2.dynamic_type.DynamicSerDe
- org.apache.hadoop.hive.serde2.MetadataTypedColumnsetSerDe
- org.apache.hadoop.hive.serde2.columnar.LazyBinaryColumnarSerDe
- org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe
- org.apache.hadoop.hive.serde2.lazybinary.LazyBinarySerDe
### How was this patch tested?
Added test cases for both Hive and data source tables
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16636 from gatorsmile/fixEmptyTableSchema.
## What changes were proposed in this pull request?
DataFrame.except doesn't work for UDT columns. It is because `ExtractEquiJoinKeys` will run `Literal.default` against UDT. However, we don't handle UDT in `Literal.default` and an exception will throw like:
java.lang.RuntimeException: no default for type
org.apache.spark.ml.linalg.VectorUDT3bfc3ba7
at org.apache.spark.sql.catalyst.expressions.Literal$.default(literals.scala:179)
at org.apache.spark.sql.catalyst.planning.ExtractEquiJoinKeys$$anonfun$4.apply(patterns.scala:117)
at org.apache.spark.sql.catalyst.planning.ExtractEquiJoinKeys$$anonfun$4.apply(patterns.scala:110)
More simple fix is just let `Literal.default` handle UDT by its sql type. So we can use more efficient join type on UDT.
Besides `except`, this also fixes other similar scenarios, so in summary this fixes:
* `except` on two Datasets with UDT
* `intersect` on two Datasets with UDT
* `Join` with the join conditions using `<=>` on UDT columns
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#16765 from viirya/df-except-for-udt.
## What changes were proposed in this pull request?
This PR proposes to
- remove unused `findTightestCommonType` in `TypeCoercion` as suggested in https://github.com/apache/spark/pull/16777#discussion_r99283834
- rename `findTightestCommonTypeOfTwo ` to `findTightestCommonType`.
- fix comments accordingly
The usage was removed while refactoring/fixing in several JIRAs such as SPARK-16714, SPARK-16735 and SPARK-16646
## How was this patch tested?
Existing tests.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16786 from HyukjinKwon/SPARK-19446.
## What changes were proposed in this pull request?
In `ExpressionEncoder.toRow` and `fromRow`, we catch the exception and output `treeString` of serializer/deserializer expressions in the error message. However, encoder can be very complex and the serializer/deserializer expressions can be very large trees and blow up the log files(e.g. generate over 500mb logs for this single error message.) As a first attempt, this PR try to use `simpleString` instead.
**BEFORE**
```scala
scala> :paste
// Entering paste mode (ctrl-D to finish)
case class TestCaseClass(value: Int)
import spark.implicits._
Seq(TestCaseClass(1)).toDS().collect()
// Exiting paste mode, now interpreting.
java.lang.RuntimeException: Error while decoding: java.lang.NullPointerException
newInstance(class TestCaseClass)
+- assertnotnull(input[0, int, false], - field (class: "scala.Int", name: "value"), - root class: "TestCaseClass")
+- input[0, int, false]
at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.fromRow(ExpressionEncoder.scala:303)
...
```
**AFTER**
```scala
...
// Exiting paste mode, now interpreting.
java.lang.RuntimeException: Error while decoding: java.lang.NullPointerException
newInstance(class TestCaseClass)
at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.fromRow(ExpressionEncoder.scala:303)
...
```
## How was this patch tested?
Manual.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16701 from dongjoon-hyun/SPARK-18909-EXPR-ERROR.
## What changes were proposed in this pull request?
There is a metadata introduced before to mark the optional columns in merged Parquet schema for filter predicate pushdown. As we upgrade to Parquet 1.8.2 which includes the fix for the pushdown of optional columns, we don't need this metadata now.
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#16756 from viirya/remove-optional-metadata.
## What changes were proposed in this pull request?
1, add the multi-cols support based on current private api
2, add the multi-cols support to pyspark
## How was this patch tested?
unit tests
Author: Zheng RuiFeng <ruifengz@foxmail.com>
Author: Ruifeng Zheng <ruifengz@foxmail.com>
Closes#12135 from zhengruifeng/quantile4multicols.
## What changes were proposed in this pull request?
This PR deduplicates arguments, `url` and `table` in `JdbcUtils` with `JDBCOptions`.
It avoids to use duplicated arguments, for example, as below:
from
```scala
val jdbcOptions = new JDBCOptions(url, table, map)
JdbcUtils.saveTable(ds, url, table, jdbcOptions)
```
to
```scala
val jdbcOptions = new JDBCOptions(url, table, map)
JdbcUtils.saveTable(ds, jdbcOptions)
```
## How was this patch tested?
Running unit test in `JdbcSuite`/`JDBCWriteSuite`
Building with Scala 2.10 as below:
```
./dev/change-scala-version.sh 2.10
./build/mvn -Pyarn -Phadoop-2.4 -Dscala-2.10 -DskipTests clean package
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16753 from HyukjinKwon/SPARK-19296.
## What changes were proposed in this pull request?
This PR proposes three things as below:
- Support LaTex inline-formula, `\( ... \)` in Scala API documentation
It seems currently,
```
\( ... \)
```
are rendered as they are, for example,
<img width="345" alt="2017-01-30 10 01 13" src="https://cloud.githubusercontent.com/assets/6477701/22423960/ab37d54a-e737-11e6-9196-4f6229c0189c.png">
It seems mistakenly more backslashes were added.
- Fix warnings Scaladoc/Javadoc generation
This PR fixes t two types of warnings as below:
```
[warn] .../spark/sql/catalyst/src/main/scala/org/apache/spark/sql/Row.scala:335: Could not find any member to link for "UnsupportedOperationException".
[warn] /**
[warn] ^
```
```
[warn] .../spark/sql/core/src/main/scala/org/apache/spark/sql/internal/VariableSubstitution.scala:24: Variable var undefined in comment for class VariableSubstitution in class VariableSubstitution
[warn] * `${var}`, `${system:var}` and `${env:var}`.
[warn] ^
```
- Fix Javadoc8 break
```
[error] .../spark/mllib/target/java/org/apache/spark/ml/PredictionModel.java:7: error: reference not found
[error] * E.g., {link VectorUDT} for vector features.
[error] ^
[error] .../spark/mllib/target/java/org/apache/spark/ml/PredictorParams.java:12: error: reference not found
[error] * E.g., {link VectorUDT} for vector features.
[error] ^
[error] .../spark/mllib/target/java/org/apache/spark/ml/Predictor.java:10: error: reference not found
[error] * E.g., {link VectorUDT} for vector features.
[error] ^
[error] .../spark/sql/hive/target/java/org/apache/spark/sql/hive/HiveAnalysis.java:5: error: reference not found
[error] * Note that, this rule must be run after {link PreprocessTableInsertion}.
[error] ^
```
## How was this patch tested?
Manually via `sbt unidoc` and `jeykil build`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16741 from HyukjinKwon/warn-and-break.
## What changes were proposed in this pull request?
In StructuredStreaming, if a new trigger was skipped because no new data arrived, we suddenly report nothing for the metrics `stateOperator`. We could however easily report the metrics from `lastExecution` to ensure continuity of metrics.
## How was this patch tested?
Regression test in `StreamingQueryStatusAndProgressSuite`
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#16716 from brkyvz/state-agg.
### What changes were proposed in this pull request?
Currently, the function `to_json` allows users to provide options for generating JSON. However, it does not pass it to `JacksonGenerator`. Thus, it ignores the user-provided options. This PR is to fix it. Below is an example.
```Scala
val df = Seq(Tuple1(Tuple1(java.sql.Timestamp.valueOf("2015-08-26 18:00:00.0")))).toDF("a")
val options = Map("timestampFormat" -> "dd/MM/yyyy HH:mm")
df.select(to_json($"a", options)).show(false)
```
The current output is like
```
+--------------------------------------+
|structtojson(a) |
+--------------------------------------+
|{"_1":"2015-08-26T18:00:00.000-07:00"}|
+--------------------------------------+
```
After the fix, the output is like
```
+-------------------------+
|structtojson(a) |
+-------------------------+
|{"_1":"26/08/2015 18:00"}|
+-------------------------+
```
### How was this patch tested?
Added test cases for both `from_json` and `to_json`
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16745 from gatorsmile/toJson.
## What changes were proposed in this pull request?
During canonicalization, `NOT(...(l, r))` should not expect such cases that `l.hashcode > r.hashcode`.
Take the rule `case NOT(GreaterThan(l, r)) if l.hashcode > r.hashcode` for example, it should never be matched since `GreaterThan(l, r)` itself would be re-written as `GreaterThan(r, l)` given `l.hashcode > r.hashcode` after canonicalization.
This patch consolidates rules like `case NOT(GreaterThan(l, r)) if l.hashcode > r.hashcode` and `case NOT(GreaterThan(l, r))`.
## How was this patch tested?
This patch expanded the `NOT` test case to cover both cases where:
- `l.hashcode > r.hashcode`
- `l.hashcode < r.hashcode`
Author: Liwei Lin <lwlin7@gmail.com>
Closes#16719 from lw-lin/canonicalize.
## What changes were proposed in this pull request?
This PR adds the first set of tests for EXISTS subquery.
File name | Brief description
------------------------| -----------------
exists-basic.sql |Tests EXISTS and NOT EXISTS subqueries with both correlated and local predicates.
exists-within-and-or.sql|Tests EXISTS and NOT EXISTS subqueries embedded in AND or OR expression.
DB2 results are attached here as reference :
[exists-basic-db2.txt](https://github.com/apache/spark/files/733031/exists-basic-db2.txt)
[exists-and-or-db2.txt](https://github.com/apache/spark/files/733030/exists-and-or-db2.txt)
## How was this patch tested?
This patch is adding tests.
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#16710 from dilipbiswal/exist-basic.
## What changes were proposed in this pull request?
After https://github.com/apache/spark/pull/16552 , `CreateHiveTableAsSelectCommand` becomes very similar to `CreateDataSourceTableAsSelectCommand`, and we can further simplify it by only creating table in the table-not-exist branch.
This PR also adds hive provider checking in DataStream reader/writer, which is missed in #16552
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16693 from cloud-fan/minor.
### What changes were proposed in this pull request?
This PR is to revert the changes made in https://github.com/apache/spark/pull/16700. It could cause the data loss after partition rename, because we have a bug in the file renaming.
Not all the OSs have the same behaviors. For example, on mac OS, if we renaming a path from `.../tbl/a=5/b=6` to `.../tbl/A=5/B=6`. The result is `.../tbl/a=5/B=6`. The expected result is `.../tbl/A=5/B=6`. Thus, renaming on mac OS is not recursive. However, the systems used in Jenkin does not have such an issue. Although this PR is not the root cause, it exposes an existing issue on the code `tablePath.getFileSystem(hadoopConf).rename(wrongPath, rightPath)`
---
Hive metastore is not case preserving and keep partition columns with lower case names.
If SparkSQL create a table with upper-case partion name use HiveExternalCatalog, when we rename partition, it first call the HiveClient to renamePartition, which will create a new lower case partition path, then SparkSql rename the lower case path to the upper-case.
while if the renamed partition contains more than one depth partition ,e.g. A=1/B=2, hive renamePartition change to a=1/b=2, then SparkSql rename it to A=1/B=2, but the a=1 still exists in the filesystem, we should also delete it.
### How was this patch tested?
N/A
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16728 from gatorsmile/revert-pr-16700.
## What changes were proposed in this pull request?
Hive metastore is not case preserving and keep partition columns with lower case names.
If SparkSQL create a table with upper-case partion name use HiveExternalCatalog, when we rename partition, it first call the HiveClient to renamePartition, which will create a new lower case partition path, then SparkSql rename the lower case path to the upper-case.
while if the renamed partition contains more than one depth partition ,e.g. A=1/B=2, hive renamePartition change to a=1/b=2, then SparkSql rename it to A=1/B=2, but the a=1 still exists in the filesystem, we should also delete it.
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16700 from windpiger/clearUselessPathAfterRenamPartition.
## What changes were proposed in this pull request?
This PR fixes both,
javadoc8 break
```
[error] .../spark/sql/hive/target/java/org/apache/spark/sql/hive/FindHiveSerdeTable.java:3: error: reference not found
[error] * Replaces {link SimpleCatalogRelation} with {link MetastoreRelation} if its table provider is hive.
```
and the example in `StructType` as a self-contained example as below:
```scala
import org.apache.spark.sql._
import org.apache.spark.sql.types._
val struct =
StructType(
StructField("a", IntegerType, true) ::
StructField("b", LongType, false) ::
StructField("c", BooleanType, false) :: Nil)
// Extract a single StructField.
val singleField = struct("b")
// singleField: StructField = StructField(b,LongType,false)
// If this struct does not have a field called "d", it throws an exception.
struct("d")
// java.lang.IllegalArgumentException: Field "d" does not exist.
// ...
// Extract multiple StructFields. Field names are provided in a set.
// A StructType object will be returned.
val twoFields = struct(Set("b", "c"))
// twoFields: StructType =
// StructType(StructField(b,LongType,false), StructField(c,BooleanType,false))
// Any names without matching fields will throw an exception.
// For the case shown below, an exception is thrown due to "d".
struct(Set("b", "c", "d"))
// java.lang.IllegalArgumentException: Field "d" does not exist.
// ...
```
```scala
import org.apache.spark.sql._
import org.apache.spark.sql.types._
val innerStruct =
StructType(
StructField("f1", IntegerType, true) ::
StructField("f2", LongType, false) ::
StructField("f3", BooleanType, false) :: Nil)
val struct = StructType(
StructField("a", innerStruct, true) :: Nil)
// Create a Row with the schema defined by struct
val row = Row(Row(1, 2, true))
```
Also, now when the column is missing, it throws an exception rather than ignoring.
## How was this patch tested?
Manually via `sbt unidoc`.
- Scaladoc
<img width="665" alt="2017-01-26 12 54 13" src="https://cloud.githubusercontent.com/assets/6477701/22297905/1245620e-e362-11e6-9e22-43bb8d9871af.png">
- Javadoc
<img width="722" alt="2017-01-26 12 54 27" src="https://cloud.githubusercontent.com/assets/6477701/22297899/0fd87e0c-e362-11e6-9033-7590bda1aea6.png">
<img width="702" alt="2017-01-26 12 54 32" src="https://cloud.githubusercontent.com/assets/6477701/22297900/0fe14154-e362-11e6-9882-768381c53163.png">
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16703 from HyukjinKwon/SPARK-12970.
## What changes were proposed in this pull request?
This pr added a variable for a UDF name in `ScalaUDF`.
Then, if the variable filled, `DataFrame#explain` prints the name.
## How was this patch tested?
Added a test in `UDFSuite`.
Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>
Closes#16707 from maropu/SPARK-19338.
## What changes were proposed in this pull request?
As of Spark 2.1, Spark SQL assumes the machine timezone for datetime manipulation, which is bad if users are not in the same timezones as the machines, or if different users have different timezones.
We should introduce a session local timezone setting that is used for execution.
An explicit non-goal is locale handling.
### Semantics
Setting the session local timezone means that the timezone-aware expressions listed below should use the timezone to evaluate values, and also it should be used to convert (cast) between string and timestamp or between timestamp and date.
- `CurrentDate`
- `CurrentBatchTimestamp`
- `Hour`
- `Minute`
- `Second`
- `DateFormatClass`
- `ToUnixTimestamp`
- `UnixTimestamp`
- `FromUnixTime`
and below are implicitly timezone-aware through cast from timestamp to date:
- `DayOfYear`
- `Year`
- `Quarter`
- `Month`
- `DayOfMonth`
- `WeekOfYear`
- `LastDay`
- `NextDay`
- `TruncDate`
For example, if you have timestamp `"2016-01-01 00:00:00"` in `GMT`, the values evaluated by some of timezone-aware expressions are:
```scala
scala> val df = Seq(new java.sql.Timestamp(1451606400000L)).toDF("ts")
df: org.apache.spark.sql.DataFrame = [ts: timestamp]
scala> df.selectExpr("cast(ts as string)", "year(ts)", "month(ts)", "dayofmonth(ts)", "hour(ts)", "minute(ts)", "second(ts)").show(truncate = false)
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
|ts |year(CAST(ts AS DATE))|month(CAST(ts AS DATE))|dayofmonth(CAST(ts AS DATE))|hour(ts)|minute(ts)|second(ts)|
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
|2016-01-01 00:00:00|2016 |1 |1 |0 |0 |0 |
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
```
whereas setting the session local timezone to `"PST"`, they are:
```scala
scala> spark.conf.set("spark.sql.session.timeZone", "PST")
scala> df.selectExpr("cast(ts as string)", "year(ts)", "month(ts)", "dayofmonth(ts)", "hour(ts)", "minute(ts)", "second(ts)").show(truncate = false)
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
|ts |year(CAST(ts AS DATE))|month(CAST(ts AS DATE))|dayofmonth(CAST(ts AS DATE))|hour(ts)|minute(ts)|second(ts)|
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
|2015-12-31 16:00:00|2015 |12 |31 |16 |0 |0 |
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
```
Notice that even if you set the session local timezone, it affects only in `DataFrame` operations, neither in `Dataset` operations, `RDD` operations nor in `ScalaUDF`s. You need to properly handle timezone by yourself.
### Design of the fix
I introduced an analyzer to pass session local timezone to timezone-aware expressions and modified DateTimeUtils to take the timezone argument.
## How was this patch tested?
Existing tests and added tests for timezone aware expressions.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#16308 from ueshin/issues/SPARK-18350.
## What changes were proposed in this pull request?
In CachedTableSuite, we are not setting up the test data at the beginning. Some tests fail while trying to run individually. When running the entire suite they run fine.
Here are some of the tests that fail -
- test("SELECT star from cached table")
- test("Self-join cached")
As part of this simplified a couple of tests by calling a support method to count the number of
InMemoryRelations.
## How was this patch tested?
Ran the failing tests individually.
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#16688 from dilipbiswal/cachetablesuite_simple.
## What changes were proposed in this pull request?
acceptType() in UDT will no only accept the same type but also all base types
## How was this patch tested?
Manual test using a set of generated UDTs fixing acceptType() in my user defined types
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: gmoehler <moehler@de.ibm.com>
Closes#16660 from gmoehler/master.
## What changes were proposed in this pull request?
This PR will report proper error messages when a subquery expression contain an invalid plan. This problem is fixed by calling CheckAnalysis for the plan inside a subquery.
## How was this patch tested?
Existing tests and two new test cases on 2 forms of subquery, namely, scalar subquery and in/exists subquery.
````
-- TC 01.01
-- The column t2b in the SELECT of the subquery is invalid
-- because it is neither an aggregate function nor a GROUP BY column.
select t1a, t2b
from t1, t2
where t1b = t2c
and t2b = (select max(avg)
from (select t2b, avg(t2b) avg
from t2
where t2a = t1.t1b
)
)
;
-- TC 01.02
-- Invalid due to the column t2b not part of the output from table t2.
select *
from t1
where t1a in (select min(t2a)
from t2
group by t2c
having t2c in (select max(t3c)
from t3
group by t3b
having t3b > t2b ))
;
````
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#16572 from nsyca/18863.
## What changes were proposed in this pull request?
Similar to SPARK-15165, codegen is in danger of arbitrary code injection. The root cause is how variable names are created by codegen.
In GenerateExec#codeGenAccessor, a variable name is created like as follows.
```
val value = ctx.freshName(name)
```
The variable `value` is named based on the value of the variable `name` and the value of `name` is from schema given by users so an attacker can attack with queries like as follows.
```
SELECT inline(array(cast(struct(1) AS struct<`=new Object() { {f();} public void f() {throw new RuntimeException("This exception is injected.");} public int x;}.x`:int>)))
```
In the example above, a RuntimeException is thrown but an attacker can replace it with arbitrary code.
## How was this patch tested?
Added a new test case.
Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>
Closes#16681 from sarutak/SPARK-19334.
## What changes were proposed in this pull request?
This PR fixes the code in Optimizer phase where the NULL-aware expression of a NOT IN query is expanded in Rule `RewritePredicateSubquery`.
Example:
The query
select a1,b1
from t1
where (a1,b1) not in (select a2,b2
from t2);
has the (a1, b1) = (a2, b2) rewritten from (before this fix):
Join LeftAnti, ((isnull((_1#2 = a2#16)) || isnull((_2#3 = b2#17))) || ((_1#2 = a2#16) && (_2#3 = b2#17)))
to (after this fix):
Join LeftAnti, (((_1#2 = a2#16) || isnull((_1#2 = a2#16))) && ((_2#3 = b2#17) || isnull((_2#3 = b2#17))))
## How was this patch tested?
sql/test, catalyst/test and new test cases in SQLQueryTestSuite.
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#16467 from nsyca/19017.
## What changes were proposed in this pull request?
Spark SQL follows MySQL to do the implicit type conversion for binary comparison: http://dev.mysql.com/doc/refman/5.7/en/type-conversion.html
However, this may return confusing result, e.g. `1 = 'true'` will return true, `19157170390056973L = '19157170390056971'` will return true.
I think it's more reasonable to follow postgres in this case, i.e. cast string to the type of the other side, but return null if the string is not castable to keep hive compatibility.
## How was this patch tested?
newly added tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15880 from cloud-fan/compare.
## What changes were proposed in this pull request?
CataLogTable's partitionSchema should check if each column name in partitionColumnNames must match one and only one field in schema, if not we should throw an exception
and CataLogTable's partitionSchema should keep order with partitionColumnNames
## How was this patch tested?
N/A
Author: windpiger <songjun@outlook.com>
Closes#16606 from windpiger/checkPartionColNameWithSchema.
## What changes were proposed in this pull request?
After [SPARK-19107](https://issues.apache.org/jira/browse/SPARK-19107), we now can treat hive as a data source and create hive tables with DataFrameWriter and Catalog. However, the support is not completed, there are still some cases we do not support.
This PR implement:
DataFrameWriter.saveAsTable work with hive format with append mode
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16552 from windpiger/saveAsTableWithHiveAppend.
## What changes were proposed in this pull request?
As adaptive query execution may change the number of partitions in different batches, it may break streaming queries. Hence, we should disallow this feature in Structured Streaming.
## How was this patch tested?
`test("SPARK-19268: Adaptive query execution should be disallowed")`.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16683 from zsxwing/SPARK-19268.
## What changes were proposed in this pull request?
Currently, running the codes in Java
```java
spark.udf().register("inc", new UDF1<Long, Long>() {
Override
public Long call(Long i) {
return i + 1;
}
}, DataTypes.LongType);
spark.range(10).toDF("x").createOrReplaceTempView("tmp");
Row result = spark.sql("SELECT inc(x) FROM tmp GROUP BY inc(x)").head();
Assert.assertEquals(7, result.getLong(0));
```
fails as below:
```
org.apache.spark.sql.AnalysisException: expression 'tmp.`x`' is neither present in the group by, nor is it an aggregate function. Add to group by or wrap in first() (or first_value) if you don't care which value you get.;;
Aggregate [UDF(x#19L)], [UDF(x#19L) AS UDF(x)#23L]
+- SubqueryAlias tmp, `tmp`
+- Project [id#16L AS x#19L]
+- Range (0, 10, step=1, splits=Some(8))
at org.apache.spark.sql.catalyst.analysis.CheckAnalysis$class.failAnalysis(CheckAnalysis.scala:40)
at org.apache.spark.sql.catalyst.analysis.Analyzer.failAnalysis(Analyzer.scala:57)
```
The root cause is because we were creating the function every time when it needs to build as below:
```scala
scala> def inc(i: Int) = i + 1
inc: (i: Int)Int
scala> (inc(_: Int)).hashCode
res15: Int = 1231799381
scala> (inc(_: Int)).hashCode
res16: Int = 2109839984
scala> (inc(_: Int)) == (inc(_: Int))
res17: Boolean = false
```
This seems leading to the comparison failure between `ScalaUDF`s created from Java UDF API, for example, in `Expression.semanticEquals`.
In case of Scala one, it seems already fine.
Both can be tested easily as below if any reviewer is more comfortable with Scala:
```scala
val df = Seq((1, 10), (2, 11), (3, 12)).toDF("x", "y")
val javaUDF = new UDF1[Int, Int] {
override def call(i: Int): Int = i + 1
}
// spark.udf.register("inc", javaUDF, IntegerType) // Uncomment this for Java API
// spark.udf.register("inc", (i: Int) => i + 1) // Uncomment this for Scala API
df.createOrReplaceTempView("tmp")
spark.sql("SELECT inc(y) FROM tmp GROUP BY inc(y)").show()
```
## How was this patch tested?
Unit test in `JavaUDFSuite.java` and `./dev/lint-java`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16553 from HyukjinKwon/SPARK-9435.
## What changes were proposed in this pull request?
Hive will expand the view text, so it needs 2 fields: originalText and viewText. Since we don't expand the view text, but only add table properties, perhaps only a single field `viewText` is enough in CatalogTable.
This PR brought in the following changes:
1. Remove the param `viewOriginalText` from `CatalogTable`;
2. Update the output of command `DescribeTableCommand`.
## How was this patch tested?
Tested by exsiting test cases, also updated the failed test cases.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16679 from jiangxb1987/catalogTable.
## What changes were proposed in this pull request?
To implement DDL commands, we added several analyzer rules in sql/hive module to analyze DDL related plans. However, our `Analyzer` currently only have one extending interface: `extendedResolutionRules`, which defines extra rules that will be run together with other rules in the resolution batch, and doesn't fit DDL rules well, because:
1. DDL rules may do some checking and normalization, but we may do it many times as the resolution batch will run rules again and again, until fixed point, and it's hard to tell if a DDL rule has already done its checking and normalization. It's fine because DDL rules are idempotent, but it's bad for analysis performance
2. some DDL rules may depend on others, and it's pretty hard to write `if` conditions to guarantee the dependencies. It will be good if we have a batch which run rules in one pass, so that we can guarantee the dependencies by rules order.
This PR adds a new extending interface in `Analyzer`: `postHocResolutionRules`, which defines rules that will be run only once in a batch runs right after the resolution batch.
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16645 from cloud-fan/analyzer.
## What changes were proposed in this pull request?
when we append data to a existed partitioned datasource table, the InsertIntoHadoopFsRelationCommand.getCustomPartitionLocations currently
return the same location with Hive default, it should return None.
## How was this patch tested?
Author: windpiger <songjun@outlook.com>
Closes#16642 from windpiger/appendSchema.
## What changes were proposed in this pull request?
As I pointed out in https://github.com/apache/spark/pull/15807#issuecomment-259143655 , the current subexpression elimination framework has a problem, it always evaluates all common subexpressions at the beginning, even they are inside conditional expressions and may not be accessed.
Ideally we should implement it like scala lazy val, so we only evaluate it when it gets accessed at lease once. https://github.com/apache/spark/issues/15837 tries this approach, but it seems too complicated and may introduce performance regression.
This PR simply stops common subexpression elimination for conditional expressions, with some cleanup.
## How was this patch tested?
regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16659 from cloud-fan/codegen.
### What changes were proposed in this pull request?
It is weird to create Hive source tables when using InMemoryCatalog. We are unable to operate it. This PR is to block users to create Hive source tables.
### How was this patch tested?
Fixed the test cases
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16587 from gatorsmile/blockHiveTable.
## What changes were proposed in this pull request?
This PR refactors CSV read path to be consistent with JSON data source. It makes the methods in classes have consistent arguments with JSON ones.
`UnivocityParser` and `JacksonParser`
``` scala
private[csv] class UnivocityParser(
schema: StructType,
requiredSchema: StructType,
options: CSVOptions) extends Logging {
...
def parse(input: String): Seq[InternalRow] = {
...
```
``` scala
class JacksonParser(
schema: StructType,
columnNameOfCorruptRecord: String,
options: JSONOptions) extends Logging {
...
def parse(input: String): Option[InternalRow] = {
...
```
These allow parsing an iterator (`String` to `InternalRow`) as below for both JSON and CSV:
```scala
iter.flatMap(parser.parse)
```
## How was this patch tested?
Existing tests should cover this.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16669 from HyukjinKwon/SPARK-16101-read.
## What changes were proposed in this pull request?
After [SPARK-19107](https://issues.apache.org/jira/browse/SPARK-19153), we now can treat hive as a data source and create hive tables with DataFrameWriter and Catalog. However, the support is not completed, there are still some cases we do not support.
this PR provide DataFrameWriter.saveAsTable work with hive format to create partitioned table.
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16593 from windpiger/saveAsTableWithPartitionedTable.
## What changes were proposed in this pull request?
For data source tables, we will always reorder the specified table schema, or the query in CTAS, to put partition columns at the end. e.g. `CREATE TABLE t(a int, b int, c int, d int) USING parquet PARTITIONED BY (d, b)` will create a table with schema `<a, c, d, b>`
Hive serde tables don't have this problem before, because its CREATE TABLE syntax specifies data schema and partition schema individually.
However, after we unifed the CREATE TABLE syntax, Hive serde table also need to do the reorder. This PR puts the reorder logic in a analyzer rule, which works with both data source tables and Hive serde tables.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16655 from cloud-fan/schema.
## What changes were proposed in this pull request?
JDBC read is failing with NPE due to missing null value check for array data type if the source table has null values in the array type column. For null values Resultset.getArray() returns null.
This PR adds null safe check to the Resultset.getArray() value before invoking method on the Array object.
## How was this patch tested?
Updated the PostgresIntegration test suite to test null values. Ran docker integration tests on my laptop.
Author: sureshthalamati <suresh.thalamati@gmail.com>
Closes#15192 from sureshthalamati/jdbc_array_null_fix-SPARK-14536.
## What changes were proposed in this pull request?
This PR refactors CSV write path to be consistent with JSON data source.
This PR makes the methods in classes have consistent arguments with JSON ones.
- `UnivocityGenerator` and `JacksonGenerator`
``` scala
private[csv] class UnivocityGenerator(
schema: StructType,
writer: Writer,
options: CSVOptions = new CSVOptions(Map.empty[String, String])) {
...
def write ...
def close ...
def flush ...
```
``` scala
private[sql] class JacksonGenerator(
schema: StructType,
writer: Writer,
options: JSONOptions = new JSONOptions(Map.empty[String, String])) {
...
def write ...
def close ...
def flush ...
```
- This PR also makes the classes put in together in a consistent manner with JSON.
- `CsvFileFormat`
``` scala
CsvFileFormat
CsvOutputWriter
```
- `JsonFileFormat`
``` scala
JsonFileFormat
JsonOutputWriter
```
## How was this patch tested?
Existing tests should cover this.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16496 from HyukjinKwon/SPARK-16101-write.
## What changes were proposed in this pull request?
There is a race condition when stopping StateStore which makes `StateStoreSuite.maintenance` flaky. `StateStore.stop` doesn't wait for the running task to finish, and an out-of-date task may fail `doMaintenance` and cancel the new task. Here is a reproducer: dde1b5b106
This PR adds MaintenanceTask to eliminate the race condition.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16627 from zsxwing/SPARK-19267.
## What changes were proposed in this pull request?
PythonUDF is unevaluable, which can not be used inside a join condition, currently the optimizer will push a PythonUDF which accessing both side of join into the join condition, then the query will fail to plan.
This PR fix this issue by checking the expression is evaluable or not before pushing it into Join.
## How was this patch tested?
Add a regression test.
Author: Davies Liu <davies@databricks.com>
Closes#16581 from davies/pyudf_join.
## What changes were proposed in this pull request?
Sort in a streaming plan should be allowed only after a aggregation in complete mode. Currently it is incorrectly allowed when present anywhere in the plan. It gives unpredictable potentially incorrect results.
## How was this patch tested?
New test
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16662 from tdas/SPARK-19314.
## What changes were proposed in this pull request?
Change non-cbo estimation behavior of aggregate:
- If groupExpression is empty, we can know row count (=1) and the corresponding size;
- otherwise, estimation falls back to UnaryNode's computeStats method, which should not propagate rowCount and attributeStats in Statistics because they are not estimated in that method.
## How was this patch tested?
Added test case
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#16631 from wzhfy/aggNoCbo.
## What changes were proposed in this pull request?
When we query a table with a filter on partitioned columns, we will push the partition filter to the metastore to get matched partitions directly.
In `HiveExternalCatalog.listPartitionsByFilter`, we assume the column names in partition filter are already normalized and we don't need to consider case sensitivity. However, `HiveTableScanExec` doesn't follow this assumption. This PR fixes it.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16647 from cloud-fan/bug.
## What changes were proposed in this pull request?
This PR refactors the code generation part to get data from `ColumnarVector` and `ColumnarBatch` by using a trait `ColumnarBatchScan` for ease of reuse. This is because this part will be reused by several components (e.g. parquet reader, Dataset.cache, and others) since `ColumnarBatch` will be first citizen.
This PR is a part of https://github.com/apache/spark/pull/15219. In advance, this PR makes the code generation for `ColumnarVector` and `ColumnarBatch` reuseable as a trait. In general, this is very useful for other components from the reuseability view, too.
## How was this patch tested?
tested existing test suites
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#15467 from kiszk/columnarrefactor.
## What changes were proposed in this pull request?
This will help the users to know the location of those downloaded jars when `spark.sql.hive.metastore.jars` is set to `maven`.
## How was this patch tested?
jenkins
Author: Yin Huai <yhuai@databricks.com>
Closes#16649 from yhuai/SPARK-19295.
## What changes were proposed in this pull request?
The initial shouldFilterOut() method invocation filter the root path name(table name in the intial call) and remove if it contains _. I moved the check one level below, so it first list files/directories in the given root path and then apply filter.
(Please fill in changes proposed in this fix)
## How was this patch tested?
Added new test case for this scenario
(Please explain how this patch was tested. E.g. unit tests, integration tests, manual tests)
(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: jayadevanmurali <jayadevan.m@tcs.com>
Author: jayadevan <jayadevan.m@tcs.com>
Closes#16635 from jayadevanmurali/branch-0.1-SPARK-19059.
## What changes were proposed in this pull request?
We have a table relation plan cache in `HiveMetastoreCatalog`, which caches a lot of things: file status, resolved data source, inferred schema, etc.
However, it doesn't make sense to limit this cache with hive support, we should move it to SQL core module so that users can use this cache without hive support.
It can also reduce the size of `HiveMetastoreCatalog`, so that it's easier to remove it eventually.
main changes:
1. move the table relation cache to `SessionCatalog`
2. `SessionCatalog.lookupRelation` will return `SimpleCatalogRelation` and the analyzer will convert it to `LogicalRelation` or `MetastoreRelation` later, then `HiveSessionCatalog` doesn't need to override `lookupRelation` anymore
3. `FindDataSourceTable` will read/write the table relation cache.
## How was this patch tested?
existing tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16621 from cloud-fan/plan-cache.
## What changes were proposed in this pull request?
We should call `StateStore.abort()` when there should be any error before the store is committed.
## How was this patch tested?
Manually.
Author: Liwei Lin <lwlin7@gmail.com>
Closes#16547 from lw-lin/append-filter.
## What changes were proposed in this pull request?
#16492 missed one race condition: `StreamExecution.awaitInitialization` may throw fatal errors and fail the test. This PR just ignores `StreamingQueryException` thrown from `awaitInitialization` so that we can verify the exception in the `ExpectFailure` action later. It's fine since `StopStream` or `ExpectFailure` will catch `StreamingQueryException` as well.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16567 from zsxwing/SPARK-19113-2.
## What changes were proposed in this pull request?
On CREATE/ALTER a view, it's no longer needed to generate a SQL text string from the LogicalPlan, instead we store the SQL query text、the output column names of the query plan, and current database to CatalogTable. Permanent views created by this approach can be resolved by current view resolution approach.
The main advantage includes:
1. If you update an underlying view, the current view also gets updated;
2. That gives us a change to get ride of SQL generation for operators.
Major changes of this PR:
1. Generate the view-specific properties(e.g. view default database, view query output column names) during permanent view creation and store them as properties in the CatalogTable;
2. Update the commands `CreateViewCommand` and `AlterViewAsCommand`, get rid of SQL generation from them.
## How was this patch tested?
Existing tests.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16613 from jiangxb1987/view-write-path.
## What changes were proposed in this pull request?
remove ununsed imports and outdated comments, and fix some minor code style issue.
## How was this patch tested?
existing ut
Author: uncleGen <hustyugm@gmail.com>
Closes#16591 from uncleGen/SPARK-19227.
## What changes were proposed in this pull request?
Inserting data into Hive tables has its own implementation that is distinct from data sources: `InsertIntoHiveTable`, `SparkHiveWriterContainer` and `SparkHiveDynamicPartitionWriterContainer`.
Note that one other major difference is that data source tables write directly to the final destination without using some staging directory, and then Spark itself adds the partitions/tables to the catalog. Hive tables actually write to some staging directory, and then call Hive metastore's loadPartition/loadTable function to load those data in. So we still need to keep `InsertIntoHiveTable` to put this special logic. In the future, we should think of writing to the hive table location directly, so that we don't need to call `loadTable`/`loadPartition` at the end and remove `InsertIntoHiveTable`.
This PR removes `SparkHiveWriterContainer` and `SparkHiveDynamicPartitionWriterContainer`, and create a `HiveFileFormat` to implement the write logic. In the future, we should also implement the read logic in `HiveFileFormat`.
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16517 from cloud-fan/insert-hive.
## What changes were proposed in this pull request?
Added outer_explode, outer_posexplode, outer_inline functions and expressions.
Some bug fixing in GenerateExec.scala for CollectionGenerator. Previously it was not correctly handling the case of outer with empty collections, only with nulls.
## How was this patch tested?
New tests added to GeneratorFunctionSuite
Author: Bogdan Raducanu <bogdan.rdc@gmail.com>
Closes#16608 from bogdanrdc/SPARK-13721.
## What changes were proposed in this pull request?
In append mode, we check whether the schema of the write is compatible with the schema of the existing data. It can be a significant performance issue in cloud environment to find the existing schema for files. This patch removes the check.
Note that for catalog tables, we always do the check, as discussed in https://github.com/apache/spark/pull/16339#discussion_r96208357
## How was this patch tested?
N/A
Closes#16339.
Author: Reynold Xin <rxin@databricks.com>
Closes#16622 from rxin/SPARK-18917.
## What changes were proposed in this pull request?
Remove duplicate call of reset() function in CurrentOrigin.withOrigin().
## How was this patch tested?
Existing test cases.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16615 from jiangxb1987/dummy-code.
### What changes were proposed in this pull request?
Empty partition column values are not valid for partition specification. Before this PR, we accept users to do it; however, Hive metastore does not detect and disallow it too. Thus, users hit the following strange error.
```Scala
val df = spark.createDataFrame(Seq((0, "a"), (1, "b"))).toDF("partCol1", "name")
df.write.mode("overwrite").partitionBy("partCol1").saveAsTable("partitionedTable")
spark.sql("alter table partitionedTable drop partition(partCol1='')")
spark.table("partitionedTable").show()
```
In the above example, the WHOLE table is DROPPED when users specify a partition spec containing only one partition column with empty values.
When the partition columns contains more than one, Hive metastore APIs simply ignore the columns with empty values and treat it as partial spec. This is also not expected. This does not follow the actual Hive behaviors. This PR is to disallow users to specify such an invalid partition spec in the `SessionCatalog` APIs.
### How was this patch tested?
Added test cases
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16583 from gatorsmile/disallowEmptyPartColValue.
## What changes were proposed in this pull request?
`dropDuplicates` will create an Alias using the same exprId, so `StreamExecution` should also replace Alias if necessary.
## How was this patch tested?
test("SPARK-19065: dropDuplicates should not create expressions using the same id")
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16564 from zsxwing/SPARK-19065.
## What changes were proposed in this pull request?
This PR proposes to fix ambiguous link warnings by simply making them as code blocks for both javadoc and scaladoc.
```
[warn] .../spark/core/src/main/scala/org/apache/spark/Accumulator.scala:20: The link target "SparkContext#accumulator" is ambiguous. Several members fit the target:
[warn] .../spark/mllib/src/main/scala/org/apache/spark/mllib/optimization/GradientDescent.scala:281: The link target "runMiniBatchSGD" is ambiguous. Several members fit the target:
[warn] .../spark/mllib/src/main/scala/org/apache/spark/mllib/fpm/AssociationRules.scala:83: The link target "run" is ambiguous. Several members fit the target:
...
```
This PR also fixes javadoc8 break as below:
```
[error] .../spark/sql/core/target/java/org/apache/spark/sql/LowPrioritySQLImplicits.java:7: error: reference not found
[error] * newProductEncoder - to disambiguate for {link List}s which are both {link Seq} and {link Product}
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/LowPrioritySQLImplicits.java:7: error: reference not found
[error] * newProductEncoder - to disambiguate for {link List}s which are both {link Seq} and {link Product}
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/LowPrioritySQLImplicits.java:7: error: reference not found
[error] * newProductEncoder - to disambiguate for {link List}s which are both {link Seq} and {link Product}
[error] ^
[info] 3 errors
```
## How was this patch tested?
Manually via `sbt unidoc > output.txt` and the checked it via `cat output.txt | grep ambiguous`
and `sbt unidoc | grep error`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16604 from HyukjinKwon/SPARK-3249.
## What changes were proposed in this pull request?
Changing the default parquet logging levels to reflect the changes made in PR [#15538](https://github.com/apache/spark/pull/15538), in order to prevent the flood of log messages by default.
## How was this patch tested?
Default log output when reading from parquet 1.6 files was compared with and without this change. The change eliminates the extraneous logging and makes the output readable.
Author: Nick Lavers <nick.lavers@videoamp.com>
Closes#16580 from nicklavers/spark-19219-set_default_parquet_log_level.
## What changes were proposed in this pull request?
SET LOCATION can also work on managed table(or table created without custom path), the behavior is a little weird, but as we have already supported it, we should add a test to explicitly show the behavior.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16597 from cloud-fan/set-location.
## What changes were proposed in this pull request?
In https://github.com/apache/spark/pull/16296 , we reached a consensus that we should hide the external/managed table concept to users and only expose custom table path.
This PR renames `Catalog.createExternalTable` to `createTable`(still keep the old versions for backward compatibility), and only set the table type to EXTERNAL if `path` is specified in options.
## How was this patch tested?
new tests in `CatalogSuite`
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16528 from cloud-fan/create-table.
## What changes were proposed in this pull request?
This PR is a follow-up to address the comments https://github.com/apache/spark/pull/16233/files#r95669988 and https://github.com/apache/spark/pull/16233/files#r95662299.
We try to wrap the child by:
1. Generate the `queryOutput` by:
1.1. If the query column names are defined, map the column names to attributes in the child output by name;
1.2. Else set the child output attributes to `queryOutput`.
2. Map the `queryQutput` to view output by index, if the corresponding attributes don't match, try to up cast and alias the attribute in `queryOutput` to the attribute in the view output.
3. Add a Project over the child, with the new output generated by the previous steps.
If the view output doesn't have the same number of columns neither with the child output, nor with the query column names, throw an AnalysisException.
## How was this patch tested?
Add new test cases in `SQLViewSuite`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16561 from jiangxb1987/alias-view.
## What changes were proposed in this pull request?
We have a config `spark.sql.files.ignoreCorruptFiles` which can be used to ignore corrupt files when reading files in SQL. Currently the `ignoreCorruptFiles` config has two issues and can't work for Parquet:
1. We only ignore corrupt files in `FileScanRDD` . Actually, we begin to read those files as early as inferring data schema from the files. For corrupt files, we can't read the schema and fail the program. A related issue reported at http://apache-spark-developers-list.1001551.n3.nabble.com/Skip-Corrupted-Parquet-blocks-footer-tc20418.html
2. In `FileScanRDD`, we assume that we only begin to read the files when starting to consume the iterator. However, it is possibly the files are read before that. In this case, `ignoreCorruptFiles` config doesn't work too.
This patch targets Parquet datasource. If this direction is ok, we can address the same issue for other datasources like Orc.
Two main changes in this patch:
1. Replace `ParquetFileReader.readAllFootersInParallel` by implementing the logic to read footers in multi-threaded manner
We can't ignore corrupt files if we use `ParquetFileReader.readAllFootersInParallel`. So this patch implements the logic to do the similar thing in `readParquetFootersInParallel`.
2. In `FileScanRDD`, we need to ignore corrupt file too when we call `readFunction` to return iterator.
One thing to notice is:
We read schema from Parquet file's footer. The method to read footer `ParquetFileReader.readFooter` throws `RuntimeException`, instead of `IOException`, if it can't successfully read the footer. Please check out df9d8e4154/parquet-hadoop/src/main/java/org/apache/parquet/hadoop/ParquetFileReader.java (L470). So this patch catches `RuntimeException`. One concern is that it might also shadow other runtime exceptions other than reading corrupt files.
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#16474 from viirya/fix-ignorecorrupted-parquet-files.
### What changes were proposed in this pull request?
```Scala
sql("CREATE TABLE tab (a STRING) STORED AS PARQUET")
// This table fetch is to fill the cache with zero leaf files
spark.table("tab").show()
sql(
s"""
|LOAD DATA LOCAL INPATH '$newPartitionDir' OVERWRITE
|INTO TABLE tab
""".stripMargin)
spark.table("tab").show()
```
In the above example, the returned result is empty after table loading. The metadata cache could be out of dated after loading new data into the table, because loading/inserting does not update the cache. So far, the metadata cache is only used for data source tables. Thus, for Hive serde tables, only `parquet` and `orc` formats are facing such issues, because the Hive serde tables in the format of parquet/orc could be converted to data source tables when `spark.sql.hive.convertMetastoreParquet`/`spark.sql.hive.convertMetastoreOrc` is on.
This PR is to refresh the metadata cache after processing the `LOAD DATA` command.
In addition, Spark SQL does not convert **partitioned** Hive tables (orc/parquet) to data source tables in the write path, but the read path is using the metadata cache for both **partitioned** and non-partitioned Hive tables (orc/parquet). That means, writing the partitioned parquet/orc tables still use `InsertIntoHiveTable`, instead of `InsertIntoHadoopFsRelationCommand`. To avoid reading the out-of-dated cache, `InsertIntoHiveTable` needs to refresh the metadata cache for partitioned tables. Note, it does not need to refresh the cache for non-partitioned parquet/orc tables, because it does not call `InsertIntoHiveTable` at all. Based on the comments, this PR will keep the existing logics unchanged. That means, we always refresh the table no matter whether the table is partitioned or not.
### How was this patch tested?
Added test cases in parquetSuites.scala
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16500 from gatorsmile/refreshInsertIntoHiveTable.
## What changes were proposed in this pull request?
Using Slf4JLoggerFactory.INSTANCE instead of creating Slf4JLoggerFactory's object with constructor. It's deprecated.
## How was this patch tested?
With running StateStoreRDDSuite.
Author: Tsuyoshi Ozawa <ozawa@apache.org>
Closes#16570 from oza/SPARK-19207.
## What changes were proposed in this pull request?
After [SPARK-19107](https://issues.apache.org/jira/browse/SPARK-19107), we now can treat hive as a data source and create hive tables with DataFrameWriter and Catalog. However, the support is not completed, there are still some cases we do not support.
This PR implement:
DataFrameWriter.saveAsTable work with hive format with overwrite mode
## How was this patch tested?
unit test added
Author: windpiger <songjun@outlook.com>
Closes#16549 from windpiger/saveAsTableWithHiveOverwrite.
## What changes were proposed in this pull request?
the offset of short is 4 in OffHeapColumnVector's putShorts, but actually it should be 2.
## How was this patch tested?
unit test
Author: Yucai Yu <yucai.yu@intel.com>
Closes#16555 from yucai/offheap_short.
Otherwise the open parentheses isn't closed in query plan descriptions of batch scans.
PushedFilters: [In(COL_A, [1,2,4,6,10,16,219,815], IsNotNull(COL_B), ...
Author: Andrew Ash <andrew@andrewash.com>
Closes#16558 from ash211/patch-9.
## What changes were proposed in this pull request?
When we convert a string to integral, we will convert that string to `decimal(20, 0)` first, so that we can turn a string with decimal format to truncated integral, e.g. `CAST('1.2' AS int)` will return `1`.
However, this brings problems when we convert a string with large numbers to integral, e.g. `CAST('1234567890123' AS int)` will return `1912276171`, while Hive returns null as we expected.
This is a long standing bug(seems it was there the first day Spark SQL was created), this PR fixes this bug by adding the native support to convert `UTF8String` to integral.
## How was this patch tested?
new regression tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16550 from cloud-fan/string-to-int.
### What changes were proposed in this pull request?
`DataFrameWriter`'s [save() API](5d38f09f47/sql/core/src/main/scala/org/apache/spark/sql/DataFrameWriter.scala (L207)) is performing a unnecessary full filesystem scan for the saved files. The save() API is the most basic/core API in `DataFrameWriter`. We should avoid it.
The related PR: https://github.com/apache/spark/pull/16090
### How was this patch tested?
Updated the existing test cases.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16481 from gatorsmile/saveFileScan.
## What changes were proposed in this pull request?
Pivoting adds backticks (e.g. 3_count(\`c\`)) in column names and, in some cases,
thes causes analysis exceptions like;
```
scala> val df = Seq((2, 3, 4), (3, 4, 5)).toDF("a", "x", "y")
scala> df.groupBy("a").pivot("x").agg(count("y"), avg("y")).na.fill(0)
org.apache.spark.sql.AnalysisException: syntax error in attribute name: `3_count(`y`)`;
at org.apache.spark.sql.catalyst.analysis.UnresolvedAttribute$.e$1(unresolved.scala:134)
at org.apache.spark.sql.catalyst.analysis.UnresolvedAttribute$.parseAttributeName(unresolved.scala:144)
...
```
So, this pr proposes to remove these backticks from column names.
## How was this patch tested?
Added a test in `DataFrameAggregateSuite`.
Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>
Closes#14812 from maropu/SPARK-17237.
## What changes were proposed in this pull request?
Currently in SQL we implement overwrites by calling fs.delete() directly on the original data. This is not ideal since we the original files end up deleted even if the job aborts. We should extend the commit protocol to allow file overwrites to be managed as well.
## How was this patch tested?
Existing tests. I also fixed a bunch of tests that were depending on the commit protocol implementation being set to the legacy mapreduce one.
cc rxin cloud-fan
Author: Eric Liang <ekl@databricks.com>
Author: Eric Liang <ekhliang@gmail.com>
Closes#16554 from ericl/add-delete-protocol.
## What changes were proposed in this pull request?
This PR proposes to throw an exception for both jdbc APIs when user specified schemas are not allowed or useless.
**DataFrameReader.jdbc(...)**
``` scala
spark.read.schema(StructType(Nil)).jdbc(...)
```
**DataFrameReader.table(...)**
```scala
spark.read.schema(StructType(Nil)).table("usrdb.test")
```
## How was this patch tested?
Unit test in `JDBCSuite` and `DataFrameReaderWriterSuite`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#14451 from HyukjinKwon/SPARK-16848.
## What changes were proposed in this pull request?
In this pr, we add more test cases for project and aggregate estimation.
## How was this patch tested?
Add test cases.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#16551 from wzhfy/addTests.
## What changes were proposed in this pull request?
This patch simplifies slightly the logical plan statistics cache implementation, as discussed in https://github.com/apache/spark/pull/16529
## How was this patch tested?
N/A - this has no behavior change.
Author: Reynold Xin <rxin@databricks.com>
Closes#16544 from rxin/SPARK-19149.
## What changes were proposed in this pull request?
We should be able to resolve a nested view. The main advantage is that if you update an underlying view, the current view also gets updated.
The new approach should be compatible with older versions of SPARK/HIVE, that means:
1. The new approach should be able to resolve the views that created by older versions of SPARK/HIVE;
2. The new approach should be able to resolve the views that are currently supported by SPARK SQL.
The new approach mainly brings in the following changes:
1. Add a new operator called `View` to keep track of the CatalogTable that describes the view, and the output attributes as well as the child of the view;
2. Update the `ResolveRelations` rule to resolve the relations and views, note that a nested view should be resolved correctly;
3. Add `viewDefaultDatabase` variable to `CatalogTable` to keep track of the default database name used to resolve a view, if the `CatalogTable` is not a view, then the variable should be `None`;
4. Add `AnalysisContext` to enable us to still support a view created with CTE/Windows query;
5. Enables the view support without enabling Hive support (i.e., enableHiveSupport);
6. Fix a weird behavior: the result of a view query may have different schema if the referenced table has been changed. After this PR, we try to cast the child output attributes to that from the view schema, throw an AnalysisException if cast is not allowed.
Note this is compatible with the views defined by older versions of Spark(before 2.2), which have empty `defaultDatabase` and all the relations in `viewText` have database part defined.
## How was this patch tested?
1. Add new tests in `SessionCatalogSuite` to test the function `lookupRelation`;
2. Add new test case in `SQLViewSuite` to test resolve a nested view.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16233 from jiangxb1987/resolve-view.
## What changes were proposed in this pull request?
Adding option in spark-submit to allow overriding the default IvySettings used to resolve artifacts as part of the Spark Packages functionality. This will allow all artifact resolution to go through a central managed repository, such as Nexus or Artifactory, where site admins can better approve and control what is used with Spark apps.
This change restructures the creation of the IvySettings object in two distinct ways. First, if the `spark.ivy.settings` option is not defined then `buildIvySettings` will create a default settings instance, as before, with defined repositories (Maven Central) included. Second, if the option is defined, the ivy settings file will be loaded from the given path and only repositories defined within will be used for artifact resolution.
## How was this patch tested?
Existing tests for default behaviour, Manual tests that load a ivysettings.xml file with local and Nexus repositories defined. Added new test to load a simple Ivy settings file with a local filesystem resolver.
Author: Bryan Cutler <cutlerb@gmail.com>
Author: Ian Hummel <ian@themodernlife.net>
Closes#15119 from BryanCutler/spark-custom-IvySettings.
## What changes were proposed in this pull request?
Currently we have two sets of statistics in LogicalPlan: a simple stats and a stats estimated by cbo, but the computing logic and naming are quite confusing, we need to unify these two sets of stats.
## How was this patch tested?
Just modify existing tests.
Author: wangzhenhua <wangzhenhua@huawei.com>
Author: Zhenhua Wang <wzh_zju@163.com>
Closes#16529 from wzhfy/unifyStats.
## What changes were proposed in this pull request?
The analyzer rule that supports to query files directly will be added to `Analyzer.extendedResolutionRules` when SparkSession is created, according to the `spark.sql.runSQLOnFiles` flag. If the flag is off when we create `SparkSession`, this rule is not added and we can not query files directly even we turn on the flag later.
This PR fixes this bug by always adding that rule to `Analyzer.extendedResolutionRules`.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16531 from cloud-fan/sql-on-files.
## What changes were proposed in this pull request?
This PR allow update mode for non-aggregation streaming queries. It will be same as the append mode if a query has no aggregations.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16520 from zsxwing/update-without-agg.
## What changes were proposed in this pull request?
`DataStreamReaderWriterSuite` makes test files in source folder like the followings. Interestingly, the root cause is `withSQLConf` fails to reset `OptionalConfigEntry` correctly. In other words, it resets the config into `Some(undefined)`.
```bash
$ git status
Untracked files:
(use "git add <file>..." to include in what will be committed)
sql/core/%253Cundefined%253E/
sql/core/%3Cundefined%3E/
```
## How was this patch tested?
Manual.
```
build/sbt "project sql" test
git status
```
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16522 from dongjoon-hyun/SPARK-19137.
## What changes were proposed in this pull request?
StreamTest sets `UncaughtExceptionHandler` after starting the query now. It may not be able to catch fatal errors during query initialization. This PR uses `onQueryStarted` callback to fix it.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16492 from zsxwing/SPARK-19113.
## What changes were proposed in this pull request?
To support `FETCH_FIRST`, SPARK-16563 used Scala `Iterator.duplicate`. However,
Scala `Iterator.duplicate` uses a **queue to buffer all items between both iterators**,
this causes GC and hangs for queries with large number of rows. We should not use this,
especially for `spark.sql.thriftServer.incrementalCollect`.
https://github.com/scala/scala/blob/2.12.x/src/library/scala/collection/Iterator.scala#L1262-L1300
## How was this patch tested?
Pass the existing tests.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16440 from dongjoon-hyun/SPARK-18857.
## What changes were proposed in this pull request?
This PR proposes to skip the tests for script transformation failed on Windows due to fixed bash location.
```
SQLQuerySuite:
- script *** FAILED *** (553 milliseconds)
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 56.0 failed 1 times, most recent failure: Lost task 0.0 in stage 56.0 (TID 54, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- Star Expansion - script transform *** FAILED *** (2 seconds, 375 milliseconds)
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 389.0 failed 1 times, most recent failure: Lost task 0.0 in stage 389.0 (TID 725, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- test script transform for stdout *** FAILED *** (2 seconds, 813 milliseconds)
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 391.0 failed 1 times, most recent failure: Lost task 0.0 in stage 391.0 (TID 726, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- test script transform for stderr *** FAILED *** (2 seconds, 407 milliseconds)
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 393.0 failed 1 times, most recent failure: Lost task 0.0 in stage 393.0 (TID 727, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- test script transform data type *** FAILED *** (171 milliseconds)
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 395.0 failed 1 times, most recent failure: Lost task 0.0 in stage 395.0 (TID 728, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
```
```
HiveQuerySuite:
- transform *** FAILED *** (359 milliseconds)
Failed to execute query using catalyst:
Error: Job aborted due to stage failure: Task 0 in stage 1347.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1347.0 (TID 2395, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- schema-less transform *** FAILED *** (344 milliseconds)
Failed to execute query using catalyst:
Error: Job aborted due to stage failure: Task 0 in stage 1348.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1348.0 (TID 2396, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- transform with custom field delimiter *** FAILED *** (296 milliseconds)
Failed to execute query using catalyst:
Error: Job aborted due to stage failure: Task 0 in stage 1349.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1349.0 (TID 2397, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- transform with custom field delimiter2 *** FAILED *** (297 milliseconds)
Failed to execute query using catalyst:
Error: Job aborted due to stage failure: Task 0 in stage 1350.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1350.0 (TID 2398, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- transform with custom field delimiter3 *** FAILED *** (312 milliseconds)
Failed to execute query using catalyst:
Error: Job aborted due to stage failure: Task 0 in stage 1351.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1351.0 (TID 2399, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- transform with SerDe2 *** FAILED *** (437 milliseconds)
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1355.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1355.0 (TID 2403, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
```
```
LogicalPlanToSQLSuite:
- script transformation - schemaless *** FAILED *** (78 milliseconds)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1968.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1968.0 (TID 3932, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- script transformation - alias list *** FAILED *** (94 milliseconds)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1969.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1969.0 (TID 3933, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- script transformation - alias list with type *** FAILED *** (93 milliseconds)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1970.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1970.0 (TID 3934, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- script transformation - row format delimited clause with only one format property *** FAILED *** (78 milliseconds)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1971.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1971.0 (TID 3935, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- script transformation - row format delimited clause with multiple format properties *** FAILED *** (94 milliseconds)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1972.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1972.0 (TID 3936, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- script transformation - row format serde clauses with SERDEPROPERTIES *** FAILED *** (78 milliseconds)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1973.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1973.0 (TID 3937, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- script transformation - row format serde clauses without SERDEPROPERTIES *** FAILED *** (78 milliseconds)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1974.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1974.0 (TID 3938, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
```
```
ScriptTransformationSuite:
- cat without SerDe *** FAILED *** (156 milliseconds)
...
Caused by: java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- cat with LazySimpleSerDe *** FAILED *** (63 milliseconds)
...
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 2383.0 failed 1 times, most recent failure: Lost task 0.0 in stage 2383.0 (TID 4819, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- script transformation should not swallow errors from upstream operators (no serde) *** FAILED *** (78 milliseconds)
...
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 2384.0 failed 1 times, most recent failure: Lost task 0.0 in stage 2384.0 (TID 4820, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- script transformation should not swallow errors from upstream operators (with serde) *** FAILED *** (47 milliseconds)
...
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 2385.0 failed 1 times, most recent failure: Lost task 0.0 in stage 2385.0 (TID 4821, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
- SPARK-14400 script transformation should fail for bad script command *** FAILED *** (47 milliseconds)
"Job aborted due to stage failure: Task 0 in stage 2386.0 failed 1 times, most recent failure: Lost task 0.0 in stage 2386.0 (TID 4822, localhost, executor driver): java.io.IOException: Cannot run program "/bin/bash": CreateProcess error=2, The system cannot find the file specified
```
## How was this patch tested?
AppVeyor as below:
```
SQLQuerySuite:
- script !!! CANCELED !!! (63 milliseconds)
- Star Expansion - script transform !!! CANCELED !!! (0 milliseconds)
- test script transform for stdout !!! CANCELED !!! (0 milliseconds)
- test script transform for stderr !!! CANCELED !!! (0 milliseconds)
- test script transform data type !!! CANCELED !!! (0 milliseconds)
```
```
HiveQuerySuite:
- transform !!! CANCELED !!! (31 milliseconds)
- schema-less transform !!! CANCELED !!! (0 milliseconds)
- transform with custom field delimiter !!! CANCELED !!! (0 milliseconds)
- transform with custom field delimiter2 !!! CANCELED !!! (0 milliseconds)
- transform with custom field delimiter3 !!! CANCELED !!! (0 milliseconds)
- transform with SerDe2 !!! CANCELED !!! (0 milliseconds)
```
```
LogicalPlanToSQLSuite:
- script transformation - schemaless !!! CANCELED !!! (78 milliseconds)
- script transformation - alias list !!! CANCELED !!! (0 milliseconds)
- script transformation - alias list with type !!! CANCELED !!! (0 milliseconds)
- script transformation - row format delimited clause with only one format property !!! CANCELED !!! (15 milliseconds)
- script transformation - row format delimited clause with multiple format properties !!! CANCELED !!! (0 milliseconds)
- script transformation - row format serde clauses with SERDEPROPERTIES !!! CANCELED !!! (0 milliseconds)
- script transformation - row format serde clauses without SERDEPROPERTIES !!! CANCELED !!! (0 milliseconds)
```
```
ScriptTransformationSuite:
- cat without SerDe !!! CANCELED !!! (62 milliseconds)
- cat with LazySimpleSerDe !!! CANCELED !!! (0 milliseconds)
- script transformation should not swallow errors from upstream operators (no serde) !!! CANCELED !!! (0 milliseconds)
- script transformation should not swallow errors from upstream operators (with serde) !!! CANCELED !!! (0 milliseconds)
- SPARK-14400 script transformation should fail for bad script command !!! CANCELED !!! (0 milliseconds)
```
Jenkins tests
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16501 from HyukjinKwon/windows-bash.
## What changes were proposed in this pull request?
This PR proposes to fix all the test failures identified by testing with AppVeyor.
**Scala - aborted tests**
```
WindowQuerySuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.execution.WindowQuerySuite *** ABORTED *** (156 milliseconds)
org.apache.spark.sql.AnalysisException: LOAD DATA input path does not exist: C:projectssparksqlhive argetscala-2.11 est-classesdatafilespart_tiny.txt;
OrcSourceSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.orc.OrcSourceSuite *** ABORTED *** (62 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
ParquetMetastoreSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.ParquetMetastoreSuite *** ABORTED *** (4 seconds, 703 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
ParquetSourceSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.ParquetSourceSuite *** ABORTED *** (3 seconds, 907 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-581a6575-454f-4f21-a516-a07f95266143;
KafkaRDDSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.KafkaRDDSuite *** ABORTED *** (5 seconds, 212 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-4722304d-213e-4296-b556-951df1a46807
DirectKafkaStreamSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.DirectKafkaStreamSuite *** ABORTED *** (7 seconds, 127 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-d0d3eba7-4215-4e10-b40e-bb797e89338e
at org.apache.spark.util.Utils$.deleteRecursively(Utils.scala:1010)
ReliableKafkaStreamSuite
Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.ReliableKafkaStreamSuite *** ABORTED *** (5 seconds, 498 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-d33e45a0-287e-4bed-acae-ca809a89d888
KafkaStreamSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.KafkaStreamSuite *** ABORTED *** (2 seconds, 892 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-59c9d169-5a56-4519-9ef0-cefdbd3f2e6c
KafkaClusterSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.KafkaClusterSuite *** ABORTED *** (1 second, 690 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-3ef402b0-8689-4a60-85ae-e41e274f179d
DirectKafkaStreamSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka010.DirectKafkaStreamSuite *** ABORTED *** (59 seconds, 626 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-426107da-68cf-4d94-b0d6-1f428f1c53f6
KafkaRDDSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka010.KafkaRDDSuite *** ABORTED *** (2 minutes, 6 seconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-b9ce7929-5dae-46ab-a0c4-9ef6f58fbc2
```
**Java - failed tests**
```
Test org.apache.spark.streaming.kafka.JavaKafkaRDDSuite.testKafkaRDD failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-1cee32f4-4390-4321-82c9-e8616b3f0fb0, took 9.61 sec
Test org.apache.spark.streaming.kafka.JavaKafkaStreamSuite.testKafkaStream failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-f42695dd-242e-4b07-847c-f299b8e4676e, took 11.797 sec
Test org.apache.spark.streaming.kafka.JavaDirectKafkaStreamSuite.testKafkaStream failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-85c0d062-78cf-459c-a2dd-7973572101ce, took 1.581 sec
Test org.apache.spark.streaming.kafka010.JavaKafkaRDDSuite.testKafkaRDD failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-49eb6b5c-8366-47a6-83f2-80c443c48280, took 17.895 sec
org.apache.spark.streaming.kafka010.JavaDirectKafkaStreamSuite.testKafkaStream failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-898cf826-d636-4b1c-a61a-c12a364c02e7, took 8.858 sec
```
**Scala - failed tests**
```
PartitionProviderCompatibilitySuite:
- insert overwrite partition of new datasource table overwrites just partition *** FAILED *** (828 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-bb6337b9-4f99-45ab-ad2c-a787ab965c09
- SPARK-18635 special chars in partition values - partition management true *** FAILED *** (5 seconds, 360 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- SPARK-18635 special chars in partition values - partition management false *** FAILED *** (141 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
UtilsSuite:
- reading offset bytes of a file (compressed) *** FAILED *** (0 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-ecb2b7d5-db8b-43a7-b268-1bf242b5a491
- reading offset bytes across multiple files (compressed) *** FAILED *** (0 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-25cc47a8-1faa-4da5-8862-cf174df63ce0
```
```
StatisticsSuite:
- MetastoreRelations fallback to HDFS for size estimation *** FAILED *** (110 milliseconds)
org.apache.spark.sql.catalyst.analysis.NoSuchTableException: Table or view 'csv_table' not found in database 'default';
```
```
SQLQuerySuite:
- permanent UDTF *** FAILED *** (125 milliseconds)
org.apache.spark.sql.AnalysisException: Undefined function: 'udtf_count_temp'. This function is neither a registered temporary function nor a permanent function registered in the database 'default'.; line 1 pos 24
- describe functions - user defined functions *** FAILED *** (125 milliseconds)
org.apache.spark.sql.AnalysisException: Undefined function: 'udtf_count'. This function is neither a registered temporary function nor a permanent function registered in the database 'default'.; line 1 pos 7
- CTAS without serde with location *** FAILED *** (16 milliseconds)
java.lang.IllegalArgumentException: java.net.URISyntaxException: Relative path in absolute URI: file:C:projectsspark%09arget%09mpspark-ed673d73-edfc-404e-829e-2e2b9725d94e/c1
- derived from Hive query file: drop_database_removes_partition_dirs.q *** FAILED *** (47 milliseconds)
java.lang.IllegalArgumentException: java.net.URISyntaxException: Relative path in absolute URI: file:C:projectsspark%09arget%09mpspark-d2ddf08e-699e-45be-9ebd-3dfe619680fe/drop_database_removes_partition_dirs_table
- derived from Hive query file: drop_table_removes_partition_dirs.q *** FAILED *** (0 milliseconds)
java.lang.IllegalArgumentException: java.net.URISyntaxException: Relative path in absolute URI: file:C:projectsspark%09arget%09mpspark-d2ddf08e-699e-45be-9ebd-3dfe619680fe/drop_table_removes_partition_dirs_table2
- SPARK-17796 Support wildcard character in filename for LOAD DATA LOCAL INPATH *** FAILED *** (109 milliseconds)
java.nio.file.InvalidPathException: Illegal char <:> at index 2: /C:/projects/spark/sql/hive/projectsspark arget mpspark-1a122f8c-dfb3-46c4-bab1-f30764baee0e/*part-r*
```
```
HiveDDLSuite:
- drop external tables in default database *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- add/drop partitions - external table *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- create/drop database - location without pre-created directory *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- create/drop database - location with pre-created directory *** FAILED *** (32 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- drop database containing tables - CASCADE *** FAILED *** (94 milliseconds)
CatalogDatabase(db1,,file:/C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be/db1.db,Map()) did not equal CatalogDatabase(db1,,file:C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be\db1.db,Map()) (HiveDDLSuite.scala:675)
- drop an empty database - CASCADE *** FAILED *** (63 milliseconds)
CatalogDatabase(db1,,file:/C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be/db1.db,Map()) did not equal CatalogDatabase(db1,,file:C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be\db1.db,Map()) (HiveDDLSuite.scala:675)
- drop database containing tables - RESTRICT *** FAILED *** (47 milliseconds)
CatalogDatabase(db1,,file:/C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be/db1.db,Map()) did not equal CatalogDatabase(db1,,file:C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be\db1.db,Map()) (HiveDDLSuite.scala:675)
- drop an empty database - RESTRICT *** FAILED *** (47 milliseconds)
CatalogDatabase(db1,,file:/C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be/db1.db,Map()) did not equal CatalogDatabase(db1,,file:C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be\db1.db,Map()) (HiveDDLSuite.scala:675)
- CREATE TABLE LIKE an external data source table *** FAILED *** (140 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-c5eba16d-07ae-4186-95bb-21c5811cf888;
- CREATE TABLE LIKE an external Hive serde table *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- desc table for data source table - no user-defined schema *** FAILED *** (125 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-e8bf5bf5-721a-4cbe-9d6 at scala.collection.immutable.List.foreach(List.scala:381)d-5543a8301c1d;
```
```
MetastoreDataSourcesSuite
- CTAS: persisted bucketed data source table *** FAILED *** (16 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
```
```
ShowCreateTableSuite:
- simple external hive table *** FAILED *** (0 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
PartitionedTablePerfStatsSuite:
- hive table: partitioned pruned table reports only selected files *** FAILED *** (313 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- datasource table: partitioned pruned table reports only selected files *** FAILED *** (219 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-311f45f8-d064-4023-a4bb-e28235bff64d;
- hive table: lazy partition pruning reads only necessary partition data *** FAILED *** (203 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- datasource table: lazy partition pruning reads only necessary partition data *** FAILED *** (187 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-fde874ca-66bd-4d0b-a40f-a043b65bf957;
- hive table: lazy partition pruning with file status caching enabled *** FAILED *** (188 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- datasource table: lazy partition pruning with file status caching enabled *** FAILED *** (187 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-e6d20183-dd68-4145-acbe-4a509849accd;
- hive table: file status caching respects refresh table and refreshByPath *** FAILED *** (172 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- datasource table: file status caching respects refresh table and refreshByPath *** FAILED *** (203 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-8b2c9651-2adf-4d58-874f-659007e21463;
- hive table: file status cache respects size limit *** FAILED *** (219 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- datasource table: file status cache respects size limit *** FAILED *** (171 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-7835ab57-cb48-4d2c-bb1d-b46d5a4c47e4;
- datasource table: table setup does not scan filesystem *** FAILED *** (266 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-20598d76-c004-42a7-8061-6c56f0eda5e2;
- hive table: table setup does not scan filesystem *** FAILED *** (266 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- hive table: num hive client calls does not scale with partition count *** FAILED *** (2 seconds, 281 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- datasource table: num hive client calls does not scale with partition count *** FAILED *** (2 seconds, 422 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-4cfed321-4d1d-4b48-8d34-5c169afff383;
- hive table: files read and cached when filesource partition management is off *** FAILED *** (234 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- datasource table: all partition data cached in memory when partition management is off *** FAILED *** (203 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-4bcc0398-15c9-4f6a-811e-12d40f3eec12;
- SPARK-18700: table loaded only once even when resolved concurrently *** FAILED *** (1 second, 266 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
HiveSparkSubmitSuite:
- temporary Hive UDF: define a UDF and use it *** FAILED *** (2 seconds, 94 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- permanent Hive UDF: define a UDF and use it *** FAILED *** (281 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- permanent Hive UDF: use a already defined permanent function *** FAILED *** (718 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- SPARK-8368: includes jars passed in through --jars *** FAILED *** (3 seconds, 521 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- SPARK-8020: set sql conf in spark conf *** FAILED *** (0 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- SPARK-8489: MissingRequirementError during reflection *** FAILED *** (94 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- SPARK-9757 Persist Parquet relation with decimal column *** FAILED *** (16 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- SPARK-11009 fix wrong result of Window function in cluster mode *** FAILED *** (16 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- SPARK-14244 fix window partition size attribute binding failure *** FAILED *** (78 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- set spark.sql.warehouse.dir *** FAILED *** (16 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- set hive.metastore.warehouse.dir *** FAILED *** (15 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- SPARK-16901: set javax.jdo.option.ConnectionURL *** FAILED *** (16 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
- SPARK-18360: default table path of tables in default database should depend on the location of default database *** FAILED *** (15 milliseconds)
java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
```
```
UtilsSuite:
- resolveURIs with multiple paths *** FAILED *** (0 milliseconds)
".../jar3,file:/C:/pi.py[%23]py.pi,file:/C:/path%..." did not equal ".../jar3,file:/C:/pi.py[#]py.pi,file:/C:/path%..." (UtilsSuite.scala:468)
```
```
CheckpointSuite:
- recovery with file input stream *** FAILED *** (10 seconds, 205 milliseconds)
The code passed to eventually never returned normally. Attempted 660 times over 10.014272499999999 seconds. Last failure message: Unexpected internal error near index 1
\
^. (CheckpointSuite.scala:680)
```
## How was this patch tested?
Manually via AppVeyor as below:
**Scala - aborted tests**
```
WindowQuerySuite - all passed
OrcSourceSuite:
- SPARK-18220: read Hive orc table with varchar column *** FAILED *** (4 seconds, 417 milliseconds)
org.apache.spark.sql.execution.QueryExecutionException: FAILED: Execution Error, return code -101 from org.apache.hadoop.hive.ql.exec.mr.MapRedTask. org.apache.hadoop.io.nativeio.NativeIO$Windows.access0(Ljava/lang/String;I)Z
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$runHive$1.apply(HiveClientImpl.scala:625)
ParquetMetastoreSuite - all passed
ParquetSourceSuite - all passed
KafkaRDDSuite - all passed
DirectKafkaStreamSuite - all passed
ReliableKafkaStreamSuite - all passed
KafkaStreamSuite - all passed
KafkaClusterSuite - all passed
DirectKafkaStreamSuite - all passed
KafkaRDDSuite - all passed
```
**Java - failed tests**
```
org.apache.spark.streaming.kafka.JavaKafkaRDDSuite - all passed
org.apache.spark.streaming.kafka.JavaDirectKafkaStreamSuite - all passed
org.apache.spark.streaming.kafka.JavaKafkaStreamSuite - all passed
org.apache.spark.streaming.kafka010.JavaDirectKafkaStreamSuite - all passed
org.apache.spark.streaming.kafka010.JavaKafkaRDDSuite - all passed
```
**Scala - failed tests**
```
PartitionProviderCompatibilitySuite:
- insert overwrite partition of new datasource table overwrites just partition (1 second, 953 milliseconds)
- SPARK-18635 special chars in partition values - partition management true (6 seconds, 31 milliseconds)
- SPARK-18635 special chars in partition values - partition management false (4 seconds, 578 milliseconds)
```
```
UtilsSuite:
- reading offset bytes of a file (compressed) (203 milliseconds)
- reading offset bytes across multiple files (compressed) (0 milliseconds)
```
```
StatisticsSuite:
- MetastoreRelations fallback to HDFS for size estimation (94 milliseconds)
```
```
SQLQuerySuite:
- permanent UDTF (407 milliseconds)
- describe functions - user defined functions (441 milliseconds)
- CTAS without serde with location (2 seconds, 831 milliseconds)
- derived from Hive query file: drop_database_removes_partition_dirs.q (734 milliseconds)
- derived from Hive query file: drop_table_removes_partition_dirs.q (563 milliseconds)
- SPARK-17796 Support wildcard character in filename for LOAD DATA LOCAL INPATH (453 milliseconds)
```
```
HiveDDLSuite:
- drop external tables in default database (3 seconds, 5 milliseconds)
- add/drop partitions - external table (2 seconds, 750 milliseconds)
- create/drop database - location without pre-created directory (500 milliseconds)
- create/drop database - location with pre-created directory (407 milliseconds)
- drop database containing tables - CASCADE (453 milliseconds)
- drop an empty database - CASCADE (375 milliseconds)
- drop database containing tables - RESTRICT (328 milliseconds)
- drop an empty database - RESTRICT (391 milliseconds)
- CREATE TABLE LIKE an external data source table (953 milliseconds)
- CREATE TABLE LIKE an external Hive serde table (3 seconds, 782 milliseconds)
- desc table for data source table - no user-defined schema (1 second, 150 milliseconds)
```
```
MetastoreDataSourcesSuite
- CTAS: persisted bucketed data source table (875 milliseconds)
```
```
ShowCreateTableSuite:
- simple external hive table (78 milliseconds)
```
```
PartitionedTablePerfStatsSuite:
- hive table: partitioned pruned table reports only selected files (1 second, 109 milliseconds)
- datasource table: partitioned pruned table reports only selected files (860 milliseconds)
- hive table: lazy partition pruning reads only necessary partition data (859 milliseconds)
- datasource table: lazy partition pruning reads only necessary partition data (1 second, 219 milliseconds)
- hive table: lazy partition pruning with file status caching enabled (875 milliseconds)
- datasource table: lazy partition pruning with file status caching enabled (890 milliseconds)
- hive table: file status caching respects refresh table and refreshByPath (922 milliseconds)
- datasource table: file status caching respects refresh table and refreshByPath (640 milliseconds)
- hive table: file status cache respects size limit (469 milliseconds)
- datasource table: file status cache respects size limit (453 milliseconds)
- datasource table: table setup does not scan filesystem (328 milliseconds)
- hive table: table setup does not scan filesystem (313 milliseconds)
- hive table: num hive client calls does not scale with partition count (5 seconds, 431 milliseconds)
- datasource table: num hive client calls does not scale with partition count (4 seconds, 79 milliseconds)
- hive table: files read and cached when filesource partition management is off (656 milliseconds)
- datasource table: all partition data cached in memory when partition management is off (484 milliseconds)
- SPARK-18700: table loaded only once even when resolved concurrently (2 seconds, 578 milliseconds)
```
```
HiveSparkSubmitSuite:
- temporary Hive UDF: define a UDF and use it (1 second, 745 milliseconds)
- permanent Hive UDF: define a UDF and use it (406 milliseconds)
- permanent Hive UDF: use a already defined permanent function (375 milliseconds)
- SPARK-8368: includes jars passed in through --jars (391 milliseconds)
- SPARK-8020: set sql conf in spark conf (156 milliseconds)
- SPARK-8489: MissingRequirementError during reflection (187 milliseconds)
- SPARK-9757 Persist Parquet relation with decimal column (157 milliseconds)
- SPARK-11009 fix wrong result of Window function in cluster mode (156 milliseconds)
- SPARK-14244 fix window partition size attribute binding failure (156 milliseconds)
- set spark.sql.warehouse.dir (172 milliseconds)
- set hive.metastore.warehouse.dir (156 milliseconds)
- SPARK-16901: set javax.jdo.option.ConnectionURL (157 milliseconds)
- SPARK-18360: default table path of tables in default database should depend on the location of default database (172 milliseconds)
```
```
UtilsSuite:
- resolveURIs with multiple paths (0 milliseconds)
```
```
CheckpointSuite:
- recovery with file input stream (4 seconds, 452 milliseconds)
```
Note: after resolving the aborted tests, there is a test failure identified as below:
```
OrcSourceSuite:
- SPARK-18220: read Hive orc table with varchar column *** FAILED *** (4 seconds, 417 milliseconds)
org.apache.spark.sql.execution.QueryExecutionException: FAILED: Execution Error, return code -101 from org.apache.hadoop.hive.ql.exec.mr.MapRedTask. org.apache.hadoop.io.nativeio.NativeIO$Windows.access0(Ljava/lang/String;I)Z
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$runHive$1.apply(HiveClientImpl.scala:625)
```
This does not look due to this problem so this PR does not fix it here.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16451 from HyukjinKwon/all-path-resource-fixes.
## What changes were proposed in this pull request?
After unifying the CREATE TABLE syntax in https://github.com/apache/spark/pull/16296, it's pretty easy to support creating hive table with `DataFrameWriter` and `Catalog` now.
This PR basically just removes the hive provider check in `DataFrameWriter.saveAsTable` and `Catalog.createExternalTable`, and add tests.
## How was this patch tested?
new tests in `HiveDDLSuite`
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16487 from cloud-fan/hive-table.
## What changes were proposed in this pull request?
If I use the function regexp_extract, and then in my regex string, use `\`, i.e. escape character, this fails codegen, because the `\` character is not properly escaped when codegen'd.
Example stack trace:
```
/* 059 */ private int maxSteps = 2;
/* 060 */ private int numRows = 0;
/* 061 */ private org.apache.spark.sql.types.StructType keySchema = new org.apache.spark.sql.types.StructType().add("date_format(window#325.start, yyyy-MM-dd HH:mm)", org.apache.spark.sql.types.DataTypes.StringType)
/* 062 */ .add("regexp_extract(source#310.description, ([a-zA-Z]+)\[.*, 1)", org.apache.spark.sql.types.DataTypes.StringType);
/* 063 */ private org.apache.spark.sql.types.StructType valueSchema = new org.apache.spark.sql.types.StructType().add("sum", org.apache.spark.sql.types.DataTypes.LongType);
/* 064 */ private Object emptyVBase;
...
org.codehaus.commons.compiler.CompileException: File 'generated.java', Line 62, Column 58: Invalid escape sequence
at org.codehaus.janino.Scanner.scanLiteralCharacter(Scanner.java:918)
at org.codehaus.janino.Scanner.produce(Scanner.java:604)
at org.codehaus.janino.Parser.peekRead(Parser.java:3239)
at org.codehaus.janino.Parser.parseArguments(Parser.java:3055)
at org.codehaus.janino.Parser.parseSelector(Parser.java:2914)
at org.codehaus.janino.Parser.parseUnaryExpression(Parser.java:2617)
at org.codehaus.janino.Parser.parseMultiplicativeExpression(Parser.java:2573)
at org.codehaus.janino.Parser.parseAdditiveExpression(Parser.java:2552)
```
In the codegend expression, the literal should use `\\` instead of `\`
A similar problem was solved here: https://github.com/apache/spark/pull/15156.
## How was this patch tested?
Regression test in `DataFrameAggregationSuite`
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#16361 from brkyvz/reg-break.
## What changes were proposed in this pull request?
Support cardinality estimation of aggregate operator
## How was this patch tested?
Add test cases
Author: Zhenhua Wang <wzh_zju@163.com>
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#16431 from wzhfy/aggEstimation.
## What changes were proposed in this pull request?
Support cardinality estimation for project operator.
## How was this patch tested?
Add a test suite and a base class in the catalyst package.
Author: Zhenhua Wang <wzh_zju@163.com>
Closes#16430 from wzhfy/projectEstimation.
## What changes were proposed in this pull request?
- [X] Make sure all join types are clearly mentioned
- [X] Make join labeling/style consistent
- [X] Make join label ordering docs the same
- [X] Improve join documentation according to above for Scala
- [X] Improve join documentation according to above for Python
- [X] Improve join documentation according to above for R
## How was this patch tested?
No tests b/c docs.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: anabranch <wac.chambers@gmail.com>
Closes#16504 from anabranch/SPARK-19126.
## What changes were proposed in this pull request?
- [X] Fix inconsistencies in function reference for dense rank and dense
- [X] Make all languages equivalent in their reference to `dense_rank` and `rank`.
## How was this patch tested?
N/A for docs.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: anabranch <wac.chambers@gmail.com>
Closes#16505 from anabranch/SPARK-19127.
## What changes were proposed in this pull request?
`OutputWriterFactory`/`OutputWriter` are internal interfaces and we can remove some unnecessary APIs:
1. `OutputWriterFactory.newWriter(path: String)`: no one calls it and no one implements it.
2. `OutputWriter.write(row: Row)`: during execution we only call `writeInternal`, which is weird as `OutputWriter` is already an internal interface. We should rename `writeInternal` to `write` and remove `def write(row: Row)` and it's related converter code. All implementations should just implement `def write(row: InternalRow)`
## How was this patch tested?
existing tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16479 from cloud-fan/hive-writer.
## What changes were proposed in this pull request?
Added a `to` call at the end of the code generated by `ScalaReflection.deserializerFor` if the requested type is not a supertype of `WrappedArray[_]` that uses `CanBuildFrom[_, _, _]` to convert result into an arbitrary subtype of `Seq[_]`.
Care was taken to preserve the original deserialization where it is possible to avoid the overhead of conversion in cases where it is not needed
`ScalaReflection.serializerFor` could already be used to serialize any `Seq[_]` so it was not altered
`SQLImplicits` had to be altered and new implicit encoders added to permit serialization of other sequence types
Also fixes [SPARK-16815] Dataset[List[T]] leads to ArrayStoreException
## How was this patch tested?
```bash
./build/mvn -DskipTests clean package && ./dev/run-tests
```
Also manual execution of the following sets of commands in the Spark shell:
```scala
case class TestCC(key: Int, letters: List[String])
val ds1 = sc.makeRDD(Seq(
(List("D")),
(List("S","H")),
(List("F","H")),
(List("D","L","L"))
)).map(x=>(x.length,x)).toDF("key","letters").as[TestCC]
val test1=ds1.map{_.key}
test1.show
```
```scala
case class X(l: List[String])
spark.createDataset(Seq(List("A"))).map(X).show
```
```scala
spark.sqlContext.createDataset(sc.parallelize(List(1) :: Nil)).collect
```
After adding arbitrary sequence support also tested with the following commands:
```scala
case class QueueClass(q: scala.collection.immutable.Queue[Int])
spark.createDataset(Seq(List(1,2,3))).map(x => QueueClass(scala.collection.immutable.Queue(x: _*))).map(_.q.dequeue).collect
```
Author: Michal Senkyr <mike.senkyr@gmail.com>
Closes#16240 from michalsenkyr/sql-caseclass-list-fix.
## What changes were proposed in this pull request?
This PR extends the existing IN/NOT IN subquery test cases coverage, adds more test cases to the IN subquery test suite.
Based on the discussion, we will create `subquery/in-subquery` sub structure under `sql/core/src/test/resources/sql-tests/inputs` directory.
This is the high level grouping for IN subquery:
`subquery/in-subquery/`
`subquery/in-subquery/simple-in.sql`
`subquery/in-subquery/in-group-by.sql (in parent side, subquery, and both)`
`subquery/in-subquery/not-in-group-by.sql`
`subquery/in-subquery/in-order-by.sql`
`subquery/in-subquery/in-limit.sql`
`subquery/in-subquery/in-having.sql`
`subquery/in-subquery/in-joins.sql`
`subquery/in-subquery/not-in-joins.sql`
`subquery/in-subquery/in-set-operations.sql`
`subquery/in-subquery/in-with-cte.sql`
`subquery/in-subquery/not-in-with-cte.sql`
subquery/in-subquery/in-multiple-columns.sql`
We will deliver it through multiple prs, this is the first pr for the IN subquery, it has
`subquery/in-subquery/simple-in.sql`
`subquery/in-subquery/in-group-by.sql (in parent side, subquery, and both)`
These are the results from running on DB2.
[Modified test file of in-group-by.sql used to run on DB2](https://github.com/apache/spark/files/683367/in-group-by.sql.db2.txt)
[Output of the run result on DB2](https://github.com/apache/spark/files/683362/in-group-by.sql.db2.out.txt)
[Modified test file of simple-in.sql used to run on DB2](https://github.com/apache/spark/files/683378/simple-in.sql.db2.txt)
[Output of the run result on DB2](https://github.com/apache/spark/files/683379/simple-in.sql.db2.out.txt)
## How was this patch tested?
This patch is adding tests.
Author: Kevin Yu <qyu@us.ibm.com>
Closes#16337 from kevinyu98/spark-18871.
## What changes were proposed in this pull request?
Today we have different syntax to create data source or hive serde tables, we should unify them to not confuse users and step forward to make hive a data source.
Please read https://issues.apache.org/jira/secure/attachment/12843835/CREATE-TABLE.pdf for details.
TODO(for follow-up PRs):
1. TBLPROPERTIES is not added to the new syntax, we should decide if we wanna add it later.
2. `SHOW CREATE TABLE` should be updated to use the new syntax.
3. we should decide if we wanna change the behavior of `SET LOCATION`.
## How was this patch tested?
new tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16296 from cloud-fan/create-table.
## What changes were proposed in this pull request?
When we append data to a partitioned table with `DataFrameWriter.saveAsTable`, there are 2 issues:
1. doesn't work when the partition has custom location.
2. will recover all partitions
This PR fixes them by moving the special partition handling code from `DataSourceAnalysis` to `InsertIntoHadoopFsRelationCommand`, so that the `DataFrameWriter.saveAsTable` code path can also benefit from it.
## How was this patch tested?
newly added regression tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16460 from cloud-fan/append.
## What changes were proposed in this pull request?
Dataset actions currently spin off a new `Dataframe` only to track query execution. This PR simplifies this code path by using the `Dataset.queryExecution` directly. This PR also merges the typed and untyped action evaluation paths.
## How was this patch tested?
Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16466 from hvanhovell/SPARK-19070.
## What changes were proposed in this pull request?
There are many locations in the Spark repo where the same word occurs consecutively. Sometimes they are appropriately placed, but many times they are not. This PR removes the inappropriately duplicated words.
## How was this patch tested?
N/A since only docs or comments were updated.
Author: Niranjan Padmanabhan <niranjan.padmanabhan@gmail.com>
Closes#16455 from neurons/np.structure_streaming_doc.
## What changes were proposed in this pull request?
Now all aggregation functions support partial aggregate, we can remove the `supportsPartual` flag in `AggregateFunction`
## How was this patch tested?
existing tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16461 from cloud-fan/partial.
## What changes were proposed in this pull request?
In https://github.com/apache/spark/pull/16402 we made a mistake that, when double/float is infinity, the `Literal` codegen will output boxed value and cause wrong result.
This PR fixes this by special handling infinity to not output boxed value.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16469 from cloud-fan/literal.
### What changes were proposed in this pull request?
The data in the managed table should be deleted after table is dropped. However, if the partition location is not under the location of the partitioned table, it is not deleted as expected. Users can specify any location for the partition when they adding a partition.
This PR is to delete partition location when dropping managed partitioned tables stored in `InMemoryCatalog`.
### How was this patch tested?
Added test cases for both HiveExternalCatalog and InMemoryCatalog
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16448 from gatorsmile/unsetSerdeProp.
## What changes were proposed in this pull request?
CSV type inferencing causes `IllegalArgumentException` on decimal numbers with heterogeneous precisions and scales because the current logic uses the last decimal type in a **partition**. Specifically, `inferRowType`, the **seqOp** of **aggregate**, returns the last decimal type. This PR fixes it to use `findTightestCommonType`.
**decimal.csv**
```
9.03E+12
1.19E+11
```
**BEFORE**
```scala
scala> spark.read.format("csv").option("inferSchema", true).load("decimal.csv").printSchema
root
|-- _c0: decimal(3,-9) (nullable = true)
scala> spark.read.format("csv").option("inferSchema", true).load("decimal.csv").show
16/12/16 14:32:49 ERROR Executor: Exception in task 0.0 in stage 4.0 (TID 4)
java.lang.IllegalArgumentException: requirement failed: Decimal precision 4 exceeds max precision 3
```
**AFTER**
```scala
scala> spark.read.format("csv").option("inferSchema", true).load("decimal.csv").printSchema
root
|-- _c0: decimal(4,-9) (nullable = true)
scala> spark.read.format("csv").option("inferSchema", true).load("decimal.csv").show
+---------+
| _c0|
+---------+
|9.030E+12|
| 1.19E+11|
+---------+
```
## How was this patch tested?
Pass the newly add test case.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16320 from dongjoon-hyun/SPARK-18877.
## What changes were proposed in this pull request?
Currently collect_set/collect_list aggregation expression don't support partial aggregation. This patch is to enable partial aggregation for them.
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#16371 from viirya/collect-partial-support.
## What changes were proposed in this pull request?
We add a cbo configuration to switch between default stats and estimated stats.
We also define a new statistics method `planStats` in LogicalPlan with conf as its parameter, in order to pass the cbo switch and other estimation related configurations in the future. `planStats` is used on the caller sides (i.e. in Optimizer and Strategies) to make transformation decisions based on stats.
## How was this patch tested?
Add a test case using a dummy LogicalPlan.
Author: Zhenhua Wang <wzh_zju@163.com>
Closes#16401 from wzhfy/cboSwitch.
### What changes were proposed in this pull request?
Remove useless `databaseName ` from `SimpleCatalogRelation`.
### How was this patch tested?
Existing test cases.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16438 from gatorsmile/removeDBFromSimpleCatalogRelation.
## What changes were proposed in this pull request?
There are two tests failing on Windows due to the different newlines.
```
- StreamingQueryProgress - prettyJson *** FAILED *** (0 milliseconds)
"{
"id" : "39788670-6722-48b7-a248-df6ba08722ac",
"runId" : "422282f1-3b81-4b47-a15d-82dda7e69390",
"name" : "myName",
...
}" did not equal "{
"id" : "39788670-6722-48b7-a248-df6ba08722ac",
"runId" : "422282f1-3b81-4b47-a15d-82dda7e69390",
"name" : "myName",
...
}"
...
```
```
- StreamingQueryStatus - prettyJson *** FAILED *** (0 milliseconds)
"{
"message" : "active",
"isDataAvailable" : true,
"isTriggerActive" : false
}" did not equal "{
"message" : "active",
"isDataAvailable" : true,
"isTriggerActive" : false
}"
...
```
The reason is, `pretty` in `org.json4s.pretty` writes OS-dependent newlines but the string defined in the tests are `\n`. This ends up with test failures.
This PR proposes to compare these regardless of newline concerns.
## How was this patch tested?
Manually tested via AppVeyor.
**Before**
https://ci.appveyor.com/project/spark-test/spark/build/417-newlines-fix-before
**After**
https://ci.appveyor.com/project/spark-test/spark/build/418-newlines-fix
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16433 from HyukjinKwon/tests-StreamingQueryStatusAndProgressSuite.
## What changes were proposed in this pull request?
`monthsSinceEpoch` in this test is like `math.floor(num)`, so `monthDiff` has two possible values.
## How was this patch tested?
Jenkins.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16449 from zsxwing/watermark-test-hotfix.
### What changes were proposed in this pull request?
Fixed non-thread-safe functions used in SessionCatalog:
- refreshTable
- lookupRelation
### How was this patch tested?
N/A
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16437 from gatorsmile/addSyncToLookUpTable.
## What changes were proposed in this pull request?
Apache Spark supports the following cases **by quoting RDD column names** while saving through JDBC.
- Allow reserved keyword as a column name, e.g., 'order'.
- Allow mixed-case colume names like the following, e.g., `[a: int, A: int]`.
``` scala
scala> val df = sql("select 1 a, 1 A")
df: org.apache.spark.sql.DataFrame = [a: int, A: int]
...
scala> df.write.mode("overwrite").format("jdbc").options(option).save()
scala> df.write.mode("append").format("jdbc").options(option).save()
```
This PR aims to use **database column names** instead of RDD column ones in order to support the following additionally.
Note that this case succeeds with `MySQL`, but fails on `Postgres`/`Oracle` before.
``` scala
val df1 = sql("select 1 a")
val df2 = sql("select 1 A")
...
df1.write.mode("overwrite").format("jdbc").options(option).save()
df2.write.mode("append").format("jdbc").options(option).save()
```
## How was this patch tested?
Pass the Jenkins test with a new testcase.
Author: Dongjoon Hyun <dongjoon@apache.org>
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15664 from dongjoon-hyun/SPARK-18123.
## What changes were proposed in this pull request?
This PR proposes to fix the test failures due to different format of paths on Windows.
Failed tests are as below:
```
ColumnExpressionSuite:
- input_file_name, input_file_block_start, input_file_block_length - FileScanRDD *** FAILED *** (187 milliseconds)
"file:///C:/projects/spark/target/tmp/spark-0b21b963-6cfa-411c-8d6f-e6a5e1e73bce/part-00001-c083a03a-e55e-4b05-9073-451de352d006.snappy.parquet" did not contain "C:\projects\spark\target\tmp\spark-0b21b963-6cfa-411c-8d6f-e6a5e1e73bce" (ColumnExpressionSuite.scala:545)
- input_file_name, input_file_block_start, input_file_block_length - HadoopRDD *** FAILED *** (172 milliseconds)
"file:/C:/projects/spark/target/tmp/spark-5d0afa94-7c2f-463b-9db9-2e8403e2bc5f/part-00000-f6530138-9ad3-466d-ab46-0eeb6f85ed0b.txt" did not contain "C:\projects\spark\target\tmp\spark-5d0afa94-7c2f-463b-9db9-2e8403e2bc5f" (ColumnExpressionSuite.scala:569)
- input_file_name, input_file_block_start, input_file_block_length - NewHadoopRDD *** FAILED *** (156 milliseconds)
"file:/C:/projects/spark/target/tmp/spark-a894c7df-c74d-4d19-82a2-a04744cb3766/part-00000-29674e3f-3fcf-4327-9b04-4dab1d46338d.txt" did not contain "C:\projects\spark\target\tmp\spark-a894c7df-c74d-4d19-82a2-a04744cb3766" (ColumnExpressionSuite.scala:598)
```
```
DataStreamReaderWriterSuite:
- source metadataPath *** FAILED *** (62 milliseconds)
org.mockito.exceptions.verification.junit.ArgumentsAreDifferent: Argument(s) are different! Wanted:
streamSourceProvider.createSource(
org.apache.spark.sql.SQLContext3b04133b,
"C:\projects\spark\target\tmp\streaming.metadata-b05db6ae-c8dc-4ce4-b0d9-1eb8c84876c0/sources/0",
None,
"org.apache.spark.sql.streaming.test",
Map()
);
-> at org.apache.spark.sql.streaming.test.DataStreamReaderWriterSuite$$anonfun$12.apply$mcV$sp(DataStreamReaderWriterSuite.scala:374)
Actual invocation has different arguments:
streamSourceProvider.createSource(
org.apache.spark.sql.SQLContext3b04133b,
"/C:/projects/spark/target/tmp/streaming.metadata-b05db6ae-c8dc-4ce4-b0d9-1eb8c84876c0/sources/0",
None,
"org.apache.spark.sql.streaming.test",
Map()
);
```
```
GlobalTempViewSuite:
- CREATE GLOBAL TEMP VIEW USING *** FAILED *** (110 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-960398ba-a0a1-45f6-a59a-d98533f9f519;
```
```
CreateTableAsSelectSuite:
- CREATE TABLE USING AS SELECT *** FAILED *** (0 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
- create a table, drop it and create another one with the same name *** FAILED *** (16 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
- create table using as select - with partitioned by *** FAILED *** (0 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
- create table using as select - with non-zero buckets *** FAILED *** (0 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
```
```
HiveMetadataCacheSuite:
- partitioned table is cached when partition pruning is true *** FAILED *** (532 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- partitioned table is cached when partition pruning is false *** FAILED *** (297 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
MultiDatabaseSuite:
- createExternalTable() to non-default database - with USE *** FAILED *** (954 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-0839d9a7-5e29-467a-9e3e-3e4cd618ee09;
- createExternalTable() to non-default database - without USE *** FAILED *** (500 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-c7e24d73-1d8f-45e8-ab7d-53a83087aec3;
- invalid database name and table names *** FAILED *** (31 milliseconds)
"Path does not exist: file:/C:projectsspark arget mpspark-15a2a494-3483-4876-80e5-ec396e704b77;" did not contain "`t:a` is not a valid name for tables/databases. Valid names only contain alphabet characters, numbers and _." (MultiDatabaseSuite.scala:296)
```
```
OrcQuerySuite:
- SPARK-8501: Avoids discovery schema from empty ORC files *** FAILED *** (15 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- Verify the ORC conversion parameter: CONVERT_METASTORE_ORC *** FAILED *** (78 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- converted ORC table supports resolving mixed case field *** FAILED *** (297 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
HadoopFsRelationTest - JsonHadoopFsRelationSuite, OrcHadoopFsRelationSuite, ParquetHadoopFsRelationSuite, SimpleTextHadoopFsRelationSuite:
- Locality support for FileScanRDD *** FAILED *** (15 milliseconds)
java.lang.IllegalArgumentException: Wrong FS: file://C:\projects\spark\target\tmp\spark-383d1f13-8783-47fd-964d-9c75e5eec50f, expected: file:///
```
```
HiveQuerySuite:
- CREATE TEMPORARY FUNCTION *** FAILED *** (0 milliseconds)
java.net.MalformedURLException: For input string: "%5Cprojects%5Cspark%5Csql%5Chive%5Ctarget%5Cscala-2.11%5Ctest-classes%5CTestUDTF.jar"
- ADD FILE command *** FAILED *** (500 milliseconds)
java.net.URISyntaxException: Illegal character in opaque part at index 2: C:\projects\spark\sql\hive\target\scala-2.11\test-classes\data\files\v1.txt
- ADD JAR command 2 *** FAILED *** (110 milliseconds)
org.apache.spark.sql.AnalysisException: LOAD DATA input path does not exist: C:projectssparksqlhive argetscala-2.11 est-classesdatafilessample.json;
```
```
PruneFileSourcePartitionsSuite:
- PruneFileSourcePartitions should not change the output of LogicalRelation *** FAILED *** (15 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
HiveCommandSuite:
- LOAD DATA LOCAL *** FAILED *** (109 milliseconds)
org.apache.spark.sql.AnalysisException: LOAD DATA input path does not exist: C:projectssparksqlhive argetscala-2.11 est-classesdatafilesemployee.dat;
- LOAD DATA *** FAILED *** (93 milliseconds)
java.net.URISyntaxException: Illegal character in opaque part at index 15: C:projectsspark arget mpemployee.dat7496657117354281006.tmp
- Truncate Table *** FAILED *** (78 milliseconds)
org.apache.spark.sql.AnalysisException: LOAD DATA input path does not exist: C:projectssparksqlhive argetscala-2.11 est-classesdatafilesemployee.dat;
```
```
HiveExternalCatalogBackwardCompatibilitySuite:
- make sure we can read table created by old version of Spark *** FAILED *** (0 milliseconds)
"[/C:/projects/spark/target/tmp/]spark-0554d859-74e1-..." did not equal "[C:\projects\spark\target\tmp\]spark-0554d859-74e1-..." (HiveExternalCatalogBackwardCompatibilitySuite.scala:213)
org.scalatest.exceptions.TestFailedException
- make sure we can alter table location created by old version of Spark *** FAILED *** (110 milliseconds)
java.net.URISyntaxException: Illegal character in opaque part at index 15: C:projectsspark arget mpspark-0e9b2c5f-49a1-4e38-a32a-c0ab1813a79f
```
```
ExternalCatalogSuite:
- create/drop/rename partitions should create/delete/rename the directory *** FAILED *** (610 milliseconds)
java.net.URISyntaxException: Illegal character in opaque part at index 2: C:\projects\spark\target\tmp\spark-4c24f010-18df-437b-9fed-990c6f9adece
```
```
SQLQuerySuite:
- describe functions - temporary user defined functions *** FAILED *** (16 milliseconds)
java.net.URISyntaxException: Illegal character in opaque part at index 22: C:projectssparksqlhive argetscala-2.11 est-classesTestUDTF.jar
- specifying database name for a temporary table is not allowed *** FAILED *** (125 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-a34c9814-a483-43f2-be29-37f616b6df91;
```
```
PartitionProviderCompatibilitySuite:
- convert partition provider to hive with repair table *** FAILED *** (281 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-ee5fc96d-8c7d-4ebf-8571-a1d62736473e;
- when partition management is enabled, new tables have partition provider hive *** FAILED *** (187 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-803ad4d6-3e8c-498d-9ca5-5cda5d9b2a48;
- when partition management is disabled, new tables have no partition provider *** FAILED *** (172 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-c9fda9e2-4020-465f-8678-52cd72d0a58f;
- when partition management is disabled, we preserve the old behavior even for new tables *** FAILED *** (203 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget
mpspark-f4a518a6-c49d-43d3-b407-0ddd76948e13;
- insert overwrite partition of legacy datasource table *** FAILED *** (188 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-f4a518a6-c49d-43d3-b407-0ddd76948e79;
- insert overwrite partition of new datasource table overwrites just partition *** FAILED *** (219 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-6ba3a88d-6f6c-42c5-a9f4-6d924a0616ff;
- SPARK-18544 append with saveAsTable - partition management true *** FAILED *** (173 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-cd234a6d-9cb4-4d1d-9e51-854ae9543bbd;
- SPARK-18635 special chars in partition values - partition management true *** FAILED *** (2 seconds, 967 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- SPARK-18635 special chars in partition values - partition management false *** FAILED *** (62 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- SPARK-18659 insert overwrite table with lowercase - partition management true *** FAILED *** (63 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- SPARK-18544 append with saveAsTable - partition management false *** FAILED *** (266 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- SPARK-18659 insert overwrite table files - partition management false *** FAILED *** (63 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- SPARK-18659 insert overwrite table with lowercase - partition management false *** FAILED *** (78 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- sanity check table setup *** FAILED *** (31 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- insert into partial dynamic partitions *** FAILED *** (47 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- insert into fully dynamic partitions *** FAILED *** (62 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- insert into static partition *** FAILED *** (78 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- overwrite partial dynamic partitions *** FAILED *** (63 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- overwrite fully dynamic partitions *** FAILED *** (47 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- overwrite static partition *** FAILED *** (63 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
MetastoreDataSourcesSuite:
- check change without refresh *** FAILED *** (203 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-00713fe4-ca04-448c-bfc7-6c5e9a2ad2a1;
- drop, change, recreate *** FAILED *** (78 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-2030a21b-7d67-4385-a65b-bb5e2bed4861;
- SPARK-15269 external data source table creation *** FAILED *** (78 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-4d50fd4a-14bc-41d6-9232-9554dd233f86;
- CTAS *** FAILED *** (109 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
- CTAS with IF NOT EXISTS *** FAILED *** (109 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
- CTAS: persisted partitioned bucketed data source table *** FAILED *** (0 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
- SPARK-15025: create datasource table with path with select *** FAILED *** (16 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
- CTAS: persisted partitioned data source table *** FAILED *** (47 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
```
```
HiveMetastoreCatalogSuite:
- Persist non-partitioned parquet relation into metastore as managed table using CTAS *** FAILED *** (16 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
- Persist non-partitioned orc relation into metastore as managed table using CTAS *** FAILED *** (16 milliseconds)
java.lang.IllegalArgumentException: Can not create a Path from an empty string
```
```
HiveUDFSuite:
- SPARK-11522 select input_file_name from non-parquet table *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
QueryPartitionSuite:
- SPARK-13709: reading partitioned Avro table with nested schema *** FAILED *** (250 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
```
ParquetHiveCompatibilitySuite:
- simple primitives *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- SPARK-10177 timestamp *** FAILED *** (0 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- array *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- map *** FAILED *** (16 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- struct *** FAILED *** (0 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
- SPARK-16344: array of struct with a single field named 'array_element' *** FAILED *** (15 milliseconds)
org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```
## How was this patch tested?
Manually tested via AppVeyor.
```
ColumnExpressionSuite:
- input_file_name, input_file_block_start, input_file_block_length - FileScanRDD (234 milliseconds)
- input_file_name, input_file_block_start, input_file_block_length - HadoopRDD (235 milliseconds)
- input_file_name, input_file_block_start, input_file_block_length - NewHadoopRDD (203 milliseconds)
```
```
DataStreamReaderWriterSuite:
- source metadataPath (63 milliseconds)
```
```
GlobalTempViewSuite:
- CREATE GLOBAL TEMP VIEW USING (436 milliseconds)
```
```
CreateTableAsSelectSuite:
- CREATE TABLE USING AS SELECT (171 milliseconds)
- create a table, drop it and create another one with the same name (422 milliseconds)
- create table using as select - with partitioned by (141 milliseconds)
- create table using as select - with non-zero buckets (125 milliseconds)
```
```
HiveMetadataCacheSuite:
- partitioned table is cached when partition pruning is true (3 seconds, 211 milliseconds)
- partitioned table is cached when partition pruning is false (1 second, 781 milliseconds)
```
```
MultiDatabaseSuite:
- createExternalTable() to non-default database - with USE (797 milliseconds)
- createExternalTable() to non-default database - without USE (640 milliseconds)
- invalid database name and table names (62 milliseconds)
```
```
OrcQuerySuite:
- SPARK-8501: Avoids discovery schema from empty ORC files (703 milliseconds)
- Verify the ORC conversion parameter: CONVERT_METASTORE_ORC (750 milliseconds)
- converted ORC table supports resolving mixed case field (625 milliseconds)
```
```
HadoopFsRelationTest - JsonHadoopFsRelationSuite, OrcHadoopFsRelationSuite, ParquetHadoopFsRelationSuite, SimpleTextHadoopFsRelationSuite:
- Locality support for FileScanRDD (296 milliseconds)
```
```
HiveQuerySuite:
- CREATE TEMPORARY FUNCTION (125 milliseconds)
- ADD FILE command (250 milliseconds)
- ADD JAR command 2 (609 milliseconds)
```
```
PruneFileSourcePartitionsSuite:
- PruneFileSourcePartitions should not change the output of LogicalRelation (359 milliseconds)
```
```
HiveCommandSuite:
- LOAD DATA LOCAL (1 second, 829 milliseconds)
- LOAD DATA (1 second, 735 milliseconds)
- Truncate Table (1 second, 641 milliseconds)
```
```
HiveExternalCatalogBackwardCompatibilitySuite:
- make sure we can read table created by old version of Spark (32 milliseconds)
- make sure we can alter table location created by old version of Spark (125 milliseconds)
- make sure we can rename table created by old version of Spark (281 milliseconds)
```
```
ExternalCatalogSuite:
- create/drop/rename partitions should create/delete/rename the directory (625 milliseconds)
```
```
SQLQuerySuite:
- describe functions - temporary user defined functions (31 milliseconds)
- specifying database name for a temporary table is not allowed (390 milliseconds)
```
```
PartitionProviderCompatibilitySuite:
- convert partition provider to hive with repair table (813 milliseconds)
- when partition management is enabled, new tables have partition provider hive (562 milliseconds)
- when partition management is disabled, new tables have no partition provider (344 milliseconds)
- when partition management is disabled, we preserve the old behavior even for new tables (422 milliseconds)
- insert overwrite partition of legacy datasource table (750 milliseconds)
- SPARK-18544 append with saveAsTable - partition management true (985 milliseconds)
- SPARK-18635 special chars in partition values - partition management true (3 seconds, 328 milliseconds)
- SPARK-18635 special chars in partition values - partition management false (2 seconds, 891 milliseconds)
- SPARK-18659 insert overwrite table with lowercase - partition management true (750 milliseconds)
- SPARK-18544 append with saveAsTable - partition management false (656 milliseconds)
- SPARK-18659 insert overwrite table files - partition management false (922 milliseconds)
- SPARK-18659 insert overwrite table with lowercase - partition management false (469 milliseconds)
- sanity check table setup (937 milliseconds)
- insert into partial dynamic partitions (2 seconds, 985 milliseconds)
- insert into fully dynamic partitions (1 second, 937 milliseconds)
- insert into static partition (1 second, 578 milliseconds)
- overwrite partial dynamic partitions (7 seconds, 561 milliseconds)
- overwrite fully dynamic partitions (1 second, 766 milliseconds)
- overwrite static partition (1 second, 797 milliseconds)
```
```
MetastoreDataSourcesSuite:
- check change without refresh (610 milliseconds)
- drop, change, recreate (437 milliseconds)
- SPARK-15269 external data source table creation (297 milliseconds)
- CTAS with IF NOT EXISTS (437 milliseconds)
- CTAS: persisted partitioned bucketed data source table (422 milliseconds)
- SPARK-15025: create datasource table with path with select (265 milliseconds)
- CTAS (438 milliseconds)
- CTAS with IF NOT EXISTS (469 milliseconds)
- CTAS: persisted partitioned bucketed data source table (406 milliseconds)
```
```
HiveMetastoreCatalogSuite:
- Persist non-partitioned parquet relation into metastore as managed table using CTAS (406 milliseconds)
- Persist non-partitioned orc relation into metastore as managed table using CTAS (313 milliseconds)
```
```
HiveUDFSuite:
- SPARK-11522 select input_file_name from non-parquet table (3 seconds, 144 milliseconds)
```
```
QueryPartitionSuite:
- SPARK-13709: reading partitioned Avro table with nested schema (1 second, 67 milliseconds)
```
```
ParquetHiveCompatibilitySuite:
- simple primitives (745 milliseconds)
- SPARK-10177 timestamp (375 milliseconds)
- array (407 milliseconds)
- map (409 milliseconds)
- struct (437 milliseconds)
- SPARK-16344: array of struct with a single field named 'array_element' (391 milliseconds)
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16397 from HyukjinKwon/SPARK-18922-paths.
## What changes were proposed in this pull request?
Currently, `createTempView`, `createOrReplaceTempView`, and `createGlobalTempView` show `ParseExceptions` on invalid table names. We had better show better error message. Also, this PR also adds and updates the missing description on the API docs correctly.
**BEFORE**
```
scala> spark.range(10).createOrReplaceTempView("11111")
org.apache.spark.sql.catalyst.parser.ParseException:
mismatched input '11111' expecting {'SELECT', 'FROM', 'ADD', ...}(line 1, pos 0)
== SQL ==
11111
...
```
**AFTER**
```
scala> spark.range(10).createOrReplaceTempView("11111")
org.apache.spark.sql.AnalysisException: Invalid view name: 11111;
...
```
## How was this patch tested?
Pass the Jenkins with updated a test case.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16427 from dongjoon-hyun/SPARK-19012.
## What changes were proposed in this pull request?
The `CreateDataSourceTableAsSelectCommand` is quite complex now, as it has a lot of work to do if the table already exists:
1. throw exception if we don't want to ignore it.
2. do some check and adjust the schema if we want to append data.
3. drop the table and create it again if we want to overwrite.
The work 2 and 3 should be done by analyzer, so that we can also apply it to hive tables.
## How was this patch tested?
existing tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15996 from cloud-fan/append.
## What changes were proposed in this pull request?
Fix the document of `ForeachWriter` to use `writeStream` instead of `write` for a streaming dataset.
## How was this patch tested?
Docs only.
Author: Carson Wang <carson.wang@intel.com>
Closes#16419 from carsonwang/FixDoc.
## What changes were proposed in this pull request?
In HDFS, when we copy a file into target directory, there will a temporary `._COPY_` file for a period of time. The duration depends on file size. If we do not skip this file, we will may read the same data for two times.
## How was this patch tested?
update unit test
Author: uncleGen <hustyugm@gmail.com>
Closes#16370 from uncleGen/SPARK-18960.
### What changes were proposed in this pull request?
Since `spark.sql.hive.thriftServer.singleSession` is a configuration of SQL component, this conf can be moved from `SparkConf` to `StaticSQLConf`.
When we introduced `spark.sql.hive.thriftServer.singleSession`, all the SQL configuration are session specific. They can be modified in different sessions.
In Spark 2.1, static SQL configuration is added. It is a perfect fit for `spark.sql.hive.thriftServer.singleSession`. Previously, we did the same move for `spark.sql.warehouse.dir` from `SparkConf` to `StaticSQLConf`
### How was this patch tested?
Added test cases in HiveThriftServer2Suites.scala
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16392 from gatorsmile/hiveThriftServerSingleSession.
## What changes were proposed in this pull request?
Currently `DatasetBenchmark` use `case class Data(l: Long, s: String)` as the record type of `RDD` and `Dataset`, which introduce serialization overhead only to `Dataset` and is unfair.
This PR use `Long` as the record type, to be fairer for `Dataset`
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16391 from cloud-fan/benchmark.
## What changes were proposed in this pull request?
`JDBCSuite` and `JDBCWriterSuite` have their own `testH2Dialect`s for their testing purposes.
This PR fixes `testH2Dialect` in `JDBCWriterSuite` by removing `getCatalystType` implementation in order to return correct types. Currently, it always returns `Some(StringType)` incorrectly. Note that, for the `testH2Dialect` in `JDBCSuite`, it's intentional because of the test case `Remap types via JdbcDialects`.
## How was this patch tested?
This is a test only update.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16409 from dongjoon-hyun/SPARK-H2-DIALECT.
## What changes were proposed in this pull request?
`Literal` can use `CodegenContex.addReferenceObj` to implement codegen, instead of `CodegenFallback`. This can also simplify the generated code a little bit, before we will generate: `((Expression) references[1]).eval(null)`, now it's just `references[1]`.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16402 from cloud-fan/minor.
## What changes were proposed in this pull request?
When we describe a table, we only wanna see the information of this table, not read it, so it's ok even if the format class is not present at the classpath.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16388 from cloud-fan/hive.
## What changes were proposed in this pull request?
Currently we implement `Aggregator` with `DeclarativeAggregate`, which will serialize/deserialize the buffer object every time we process an input.
This PR implements `Aggregator` with `TypedImperativeAggregate` and avoids to serialize/deserialize buffer object many times. The benchmark shows we get about 2 times speed up.
For simple buffer object that doesn't need serialization, we still go with `DeclarativeAggregate`, to avoid performance regression.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16383 from cloud-fan/aggregator.
## What changes were proposed in this pull request?
`CSVRelation.csvParser` does type dispatch for each value in each row. We can prevent this because the schema is already kept in `CSVRelation`.
So, this PR proposes that converters are created first according to the schema, and then apply them to each.
I just ran some small benchmarks as below after resembling the logics in 7c33b0fd05/sql/core/src/main/scala/org/apache/spark/sql/execution/datasources/csv/CSVFileFormat.scala (L170-L178) to test the updated logics.
```scala
test("Benchmark for CSV converter") {
var numMalformedRecords = 0
val N = 500 << 12
val schema = StructType(
StructField("a", StringType) ::
StructField("b", StringType) ::
StructField("c", StringType) ::
StructField("d", StringType) :: Nil)
val row = Array("1.0", "test", "2015-08-20 14:57:00", "FALSE")
val data = spark.sparkContext.parallelize(List.fill(N)(row))
val parser = CSVRelation.csvParser(schema, schema.fieldNames, CSVOptions())
val benchmark = new Benchmark("CSV converter", N)
benchmark.addCase("cast CSV string tokens", 10) { _ =>
data.flatMap { recordTokens =>
parser(recordTokens, numMalformedRecords)
}.collect()
}
benchmark.run()
}
```
**Before**
```
CSV converter: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
cast CSV string tokens 1061 / 1130 1.9 517.9 1.0X
```
**After**
```
CSV converter: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
cast CSV string tokens 940 / 1011 2.2 459.2 1.0X
```
## How was this patch tested?
Tests in `CSVTypeCastSuite` and `CSVRelation`
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16351 from HyukjinKwon/type-dispatch.
## What changes were proposed in this pull request?
`UnsafeKVExternalSorter` uses `UnsafeInMemorySorter` to sort the records of `BytesToBytesMap` if it is given a map.
Currently we use the number of keys in `BytesToBytesMap` to determine if the array used for sort is enough or not. We has an assert that ensures the size of the array is enough: `map.numKeys() <= map.getArray().size() / 2`.
However, each record in the map takes two entries in the array, one is record pointer, another is key prefix. So the correct assert should be `map.numKeys() * 2 <= map.getArray().size() / 2`.
## How was this patch tested?
N/A
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#16232 from viirya/SPARK-18800-fix-UnsafeKVExternalSorter.
## What changes were proposed in this pull request?
Statistics in LogicalPlan should use attributes to refer to columns rather than column names, because two columns from two relations can have the same column name. But CatalogTable doesn't have the concepts of attribute or broadcast hint in Statistics. Therefore, putting Statistics in CatalogTable is confusing.
We define a different statistic structure in CatalogTable, which is only responsible for interacting with metastore, and is converted to statistics in LogicalPlan when it is used.
## How was this patch tested?
add test cases
Author: wangzhenhua <wangzhenhua@huawei.com>
Author: Zhenhua Wang <wzh_zju@163.com>
Closes#16323 from wzhfy/nameToAttr.
## What changes were proposed in this pull request?
Add missing InterfaceStability.Evolving for Structured Streaming APIs
## How was this patch tested?
Compiling the codes.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16385 from zsxwing/SPARK-18985.
## What changes were proposed in this pull request?
SortPartitions and RedistributeData logical operators are not actually used and can be removed. Note that we do have a Sort operator (with global flag false) that subsumed SortPartitions.
## How was this patch tested?
Also updated test cases to reflect the removal.
Author: Reynold Xin <rxin@databricks.com>
Closes#16381 from rxin/SPARK-18973.
## What changes were proposed in this pull request?
This PR cleans up duplicated checking for file paths in implemented data sources and prevent to attempt to list twice in ORC data source.
https://github.com/apache/spark/pull/14585 handles a problem for the partition column name having `_` and the issue itself is resolved correctly. However, it seems the data sources implementing `FileFormat` are validating the paths duplicately. Assuming from the comment in `CSVFileFormat`, `// TODO: Move filtering.`, I guess we don't have to check this duplicately.
Currently, this seems being filtered in `PartitioningAwareFileIndex.shouldFilterOut` and`PartitioningAwareFileIndex.isDataPath`. So, `FileFormat.inferSchema` will always receive leaf files. For example, running to codes below:
``` scala
spark.range(10).withColumn("_locality_code", $"id").write.partitionBy("_locality_code").save("/tmp/parquet")
spark.read.parquet("/tmp/parquet")
```
gives the paths below without directories but just valid data files:
``` bash
/tmp/parquet/_col=0/part-r-00000-094a8efa-bece-4b50-b54c-7918d1f7b3f8.snappy.parquet
/tmp/parquet/_col=1/part-r-00000-094a8efa-bece-4b50-b54c-7918d1f7b3f8.snappy.parquet
/tmp/parquet/_col=2/part-r-00000-25de2b50-225a-4bcf-a2bc-9eb9ed407ef6.snappy.parquet
...
```
to `FileFormat.inferSchema`.
## How was this patch tested?
Unit test added in `HadoopFsRelationTest` and related existing tests.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#14627 from HyukjinKwon/SPARK-16975.
## What changes were proposed in this pull request?
There are several tests failing due to resource-closing-related and path-related problems on Windows as below.
- `SQLQuerySuite`:
```
- specifying database name for a temporary table is not allowed *** FAILED *** (125 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-1f4471ab-aac0-4239-ae35-833d54b37e52;
at org.apache.spark.sql.execution.datasources.DataSource$$anonfun$14.apply(DataSource.scala:382)
at org.apache.spark.sql.execution.datasources.DataSource$$anonfun$14.apply(DataSource.scala:370)
```
- `JsonSuite`:
```
- Loading a JSON dataset from a text file with SQL *** FAILED *** (94 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-c918a8b7-fc09-433c-b9d0-36c0f78ae918;
at org.apache.spark.sql.execution.datasources.DataSource$$anonfun$14.apply(DataSource.scala:382)
at org.apache.spark.sql.execution.datasources.DataSource$$anonfun$14.apply(DataSource.scala:370)
```
- `StateStoreSuite`:
```
- SPARK-18342: commit fails when rename fails *** FAILED *** (16 milliseconds)
java.lang.IllegalArgumentException: java.net.URISyntaxException: Relative path in absolute URI: StateStoreSuite29777261fs://C:%5Cprojects%5Cspark%5Ctarget%5Ctmp%5Cspark-ef349862-7281-4963-aaf3-add0d670a4ad%5C?????-2218c2f8-2cf6-4f80-9cdf-96354e8246a77685899733421033312/0
at org.apache.hadoop.fs.Path.initialize(Path.java:206)
at org.apache.hadoop.fs.Path.<init>(Path.java:116)
at org.apache.hadoop.fs.Path.<init>(Path.java:89)
...
Cause: java.net.URISyntaxException: Relative path in absolute URI: StateStoreSuite29777261fs://C:%5Cprojects%5Cspark%5Ctarget%5Ctmp%5Cspark-ef349862-7281-4963-aaf3-add0d670a4ad%5C?????-2218c2f8-2cf6-4f80-9cdf-96354e8246a77685899733421033312/0
at java.net.URI.checkPath(URI.java:1823)
at java.net.URI.<init>(URI.java:745)
at org.apache.hadoop.fs.Path.initialize(Path.java:203)
```
- `HDFSMetadataLogSuite`:
```
- FileManager: FileContextManager *** FAILED *** (94 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-415bb0bd-396b-444d-be82-04599e025f21
at org.apache.spark.util.Utils$.deleteRecursively(Utils.scala:1010)
at org.apache.spark.sql.test.SQLTestUtils$class.withTempDir(SQLTestUtils.scala:127)
at org.apache.spark.sql.execution.streaming.HDFSMetadataLogSuite.withTempDir(HDFSMetadataLogSuite.scala:38)
- FileManager: FileSystemManager *** FAILED *** (78 milliseconds)
java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-ef8222cd-85aa-47c0-a396-bc7979e15088
at org.apache.spark.util.Utils$.deleteRecursively(Utils.scala:1010)
at org.apache.spark.sql.test.SQLTestUtils$class.withTempDir(SQLTestUtils.scala:127)
at org.apache.spark.sql.execution.streaming.HDFSMetadataLogSuite.withTempDir(HDFSMetadataLogSuite.scala:38)
```
And, there are some tests being failed due to the length limitation on cmd in Windows as below:
- `LauncherBackendSuite`:
```
- local: launcher handle *** FAILED *** (30 seconds, 120 milliseconds)
The code passed to eventually never returned normally. Attempted 283 times over 30.0960053 seconds. Last failure message: The reference was null. (LauncherBackendSuite.scala:56)
org.scalatest.exceptions.TestFailedDueToTimeoutException:
at org.scalatest.concurrent.Eventually$class.tryTryAgain$1(Eventually.scala:420)
at org.scalatest.concurrent.Eventually$class.eventually(Eventually.scala:438)
- standalone/client: launcher handle *** FAILED *** (30 seconds, 47 milliseconds)
The code passed to eventually never returned normally. Attempted 282 times over 30.037987100000002 seconds. Last failure message: The reference was null. (LauncherBackendSuite.scala:56)
org.scalatest.exceptions.TestFailedDueToTimeoutException:
at org.scalatest.concurrent.Eventually$class.tryTryAgain$1(Eventually.scala:420)
at org.scalatest.concurrent.Eventually$class.eventually(Eventually.scala:438)
```
The executed command is, https://gist.github.com/HyukjinKwon/d3fdd2e694e5c022992838a618a516bd, which is 16K length; however, the length limitation is 8K on Windows. So, it is being failed to launch.
This PR proposes to fix the test failures on Windows and skip the tests failed due to the length limitation
## How was this patch tested?
Manually tested via AppVeyor
**Before**
`SQLQuerySuite `: https://ci.appveyor.com/project/spark-test/spark/build/306-pr-references
`JsonSuite`: https://ci.appveyor.com/project/spark-test/spark/build/307-pr-references
`StateStoreSuite` : https://ci.appveyor.com/project/spark-test/spark/build/305-pr-references
`HDFSMetadataLogSuite`: https://ci.appveyor.com/project/spark-test/spark/build/304-pr-references
`LauncherBackendSuite`: https://ci.appveyor.com/project/spark-test/spark/build/303-pr-references
**After**
`SQLQuerySuite`: https://ci.appveyor.com/project/spark-test/spark/build/293-SQLQuerySuite
`JsonSuite`: https://ci.appveyor.com/project/spark-test/spark/build/294-JsonSuite
`StateStoreSuite`: https://ci.appveyor.com/project/spark-test/spark/build/297-StateStoreSuite
`HDFSMetadataLogSuite`: https://ci.appveyor.com/project/spark-test/spark/build/319-pr-references
`LauncherBackendSuite`: failed test skipped.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16335 from HyukjinKwon/more-fixes-on-windows.
## What changes were proposed in this pull request?
Starting Spark 2.1.0, bucketing feature is available for all file-based data sources. This patch fixes some function docs that haven't yet been updated to reflect that.
## How was this patch tested?
N/A
Author: Reynold Xin <rxin@databricks.com>
Closes#16349 from rxin/ds-doc.
## What changes were proposed in this pull request?
This patch includes minor changes to improve readability for partition handling code. I'm in the middle of implementing some new feature and found some naming / implicit type inference not as intuitive.
## How was this patch tested?
This patch should have no semantic change and the changes should be covered by existing test cases.
Author: Reynold Xin <rxin@databricks.com>
Closes#16378 from rxin/minor-fix.
## What changes were proposed in this pull request?
This PR audits places using `logicalPlan` in StreamExecution and ensures they all handles the case that `logicalPlan` cannot be created.
In addition, this PR also fixes the following issues in `StreamingQueryException`:
- `StreamingQueryException` and `StreamExecution` are cycle-dependent because in the `StreamingQueryException`'s constructor, it calls `StreamExecution`'s `toDebugString` which uses `StreamingQueryException`. Hence it will output `null` value in the error message.
- Duplicated stack trace when calling Throwable.printStackTrace because StreamingQueryException's toString contains the stack trace.
## How was this patch tested?
The updated `test("max files per trigger - incorrect values")`. I found this issue when I switched from `testStream` to the real codes to verify the failure in this test.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16322 from zsxwing/SPARK-18907.
## What changes were proposed in this pull request?
This pr is to fix an `NullPointerException` issue caused by a following `limit + aggregate` query;
```
scala> val df = Seq(("a", 1), ("b", 2), ("c", 1), ("d", 5)).toDF("id", "value")
scala> df.limit(2).groupBy("id").count().show
WARN TaskSetManager: Lost task 0.0 in stage 9.0 (TID 8204, lvsp20hdn012.stubprod.com): java.lang.NullPointerException
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.agg_doAggregateWithKeys$(Unknown Source)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown Source)
```
The root culprit is that [`$doAgg()`](https://github.com/apache/spark/blob/master/sql/core/src/main/scala/org/apache/spark/sql/execution/aggregate/HashAggregateExec.scala#L596) skips an initialization of [the buffer iterator](https://github.com/apache/spark/blob/master/sql/core/src/main/scala/org/apache/spark/sql/execution/aggregate/HashAggregateExec.scala#L603); `BaseLimitExec` sets `stopEarly=true` and `$doAgg()` exits in the middle without the initialization.
## How was this patch tested?
Added a test to check if no exception happens for limit + aggregates in `DataFrameAggregateSuite.scala`.
Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>
Closes#15980 from maropu/SPARK-18528.
## What changes were proposed in this pull request?
Made update mode public. As part of that here are the changes.
- Update DatastreamWriter to accept "update"
- Changed package of InternalOutputModes from o.a.s.sql to o.a.s.sql.catalyst
- Added update mode state removing with watermark to StateStoreSaveExec
## How was this patch tested?
Added new tests in changed modules
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16360 from tdas/SPARK-18234.
Remove spark-tag's compile-scope dependency (and, indirectly, spark-core's compile-scope transitive-dependency) on scalatest by splitting test-oriented tags into spark-tags' test JAR.
Alternative to #16303.
Author: Ryan Williams <ryan.blake.williams@gmail.com>
Closes#16311 from ryan-williams/tt.
## What changes were proposed in this pull request?
Currently, Spark writes a single file out per task, sometimes leading to very large files. It would be great to have an option to limit the max number of records written per file in a task, to avoid humongous files.
This patch introduces a new write config option `maxRecordsPerFile` (default to a session-wide setting `spark.sql.files.maxRecordsPerFile`) that limits the max number of records written to a single file. A non-positive value indicates there is no limit (same behavior as not having this flag).
## How was this patch tested?
Added test cases in PartitionedWriteSuite for both dynamic partition insert and non-dynamic partition insert.
Author: Reynold Xin <rxin@databricks.com>
Closes#16204 from rxin/SPARK-18775.
## What changes were proposed in this pull request?
Two changes
- Fix how delays specified in months and years are translated to milliseconds
- Following up on #16258, not show watermark when there is no watermarking in the query
## How was this patch tested?
Updated and new unit tests
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16304 from tdas/SPARK-18834-1.
## What changes were proposed in this pull request?
It's a huge waste to call `Catalog.listTables` in `SQLContext.tableNames`, which only need the table names, while `Catalog.listTables` will get the table metadata for each table name.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16352 from cloud-fan/minor.
### What changes were proposed in this pull request?
Currently, we only have a SQL interface for recovering all the partitions in the directory of a table and update the catalog. `MSCK REPAIR TABLE` or `ALTER TABLE table RECOVER PARTITIONS`. (Actually, very hard for me to remember `MSCK` and have no clue what it means)
After the new "Scalable Partition Handling", the table repair becomes much more important for making visible the data in the created data source partitioned table.
Thus, this PR is to add it into the Catalog interface. After this PR, users can repair the table by
```Scala
spark.catalog.recoverPartitions("testTable")
```
### How was this patch tested?
Modified the existing test cases.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16356 from gatorsmile/repairTable.
## What changes were proposed in this pull request?
It was pretty flaky before 10 days ago.
https://spark-tests.appspot.com/test-details?suite_name=org.apache.spark.sql.execution.streaming.state.StateStoreSuite&test_name=maintenance
Since no code changes went into this code path to not be so flaky, I'm just increasing the timeouts such that load related flakiness shouldn't be a problem. As you may see from the testing, I haven't been able to reproduce it.
## How was this patch tested?
2000 retries 5 times
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#16314 from brkyvz/maint-flaky.
## What changes were proposed in this pull request?
Checkpoint Location can be defined for a StructuredStreaming on a per-query basis by the `DataStreamWriter` options, but it can also be provided through SparkSession configurations. It should be able to recover in both cases when the OutputMode is Complete for MemorySinks.
## How was this patch tested?
Unit tests
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#16342 from brkyvz/chk-rec.
## What changes were proposed in this pull request?
When we append data to an existing table with `DataFrameWriter.saveAsTable`, we will do various checks to make sure the appended data is consistent with the existing data.
However, we get the information of the existing table by matching the table relation, instead of looking at the table metadata. This is error-prone, e.g. we only check the number of columns for `HadoopFsRelation`, we forget to check bucketing, etc.
This PR refactors the error checking by looking at the metadata of the existing table, and fix several bugs:
* SPARK-18899: We forget to check if the specified bucketing matched the existing table, which may lead to a problematic table that has different bucketing in different data files.
* SPARK-18912: We forget to check the number of columns for non-file-based data source table
* SPARK-18913: We don't support append data to a table with special column names.
## How was this patch tested?
new regression test.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16313 from cloud-fan/bug1.
## What changes were proposed in this pull request?
In order to respond to task cancellation, Spark tasks must periodically check `TaskContext.isInterrupted()`, but this check is missing on a few critical read paths used in Spark SQL, including `FileScanRDD`, `JDBCRDD`, and UnsafeSorter-based sorts. This can cause interrupted / cancelled tasks to continue running and become zombies (as also described in #16189).
This patch aims to fix this problem by adding `TaskContext.isInterrupted()` checks to these paths. Note that I could have used `InterruptibleIterator` to simply wrap a bunch of iterators but in some cases this would have an adverse performance penalty or might not be effective due to certain special uses of Iterators in Spark SQL. Instead, I inlined `InterruptibleIterator`-style logic into existing iterator subclasses.
## How was this patch tested?
Tested manually in `spark-shell` with two different reproductions of non-cancellable tasks, one involving scans of huge files and another involving sort-merge joins that spill to disk. Both causes of zombie tasks are fixed by the changes added here.
Author: Josh Rosen <joshrosen@databricks.com>
Closes#16340 from JoshRosen/sql-task-interruption.
## What changes were proposed in this pull request?
Currently `ImplicitTypeCasts` doesn't handle casts between `ArrayType`s, this is not convenient, we should add a rule to enable casting from `ArrayType(InternalType)` to `ArrayType(newInternalType)`.
Goals:
1. Add a rule to `ImplicitTypeCasts` to enable casting between `ArrayType`s;
2. Simplify `Percentile` and `ApproximatePercentile`.
## How was this patch tested?
Updated test cases in `TypeCoercionSuite`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16057 from jiangxb1987/implicit-cast-complex-types.
## What changes were proposed in this pull request?
It's weird that we use `Hive.getDatabase` to check the existence of a database, while Hive has a `databaseExists` interface.
What's worse, `Hive.getDatabase` will produce an error message if the database doesn't exist, which is annoying when we only want to check the database existence.
This PR fixes this and use `Hive.databaseExists` to check database existence.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16332 from cloud-fan/minor.
## What changes were proposed in this pull request?
As the scenario describe in [SPARK-18700](https://issues.apache.org/jira/browse/SPARK-18700), when cachedDataSourceTables invalided, the coming few queries will fetch all FileStatus in listLeafFiles function. In the condition of table has many partitions, these jobs will occupy much memory of driver finally may cause driver OOM.
In this patch, add StripedLock for each table's relation in cache not for the whole cachedDataSourceTables, each table's load cache operation protected by it.
## How was this patch tested?
Add a multi-thread access table test in `PartitionedTablePerfStatsSuite` and check it only loading once using metrics in `HiveCatalogMetrics`
Author: xuanyuanking <xyliyuanjian@gmail.com>
Closes#16135 from xuanyuanking/SPARK-18700.
## What changes were proposed in this pull request?
Merge two FileStreamSourceSuite files into one file.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16315 from zsxwing/FileStreamSourceSuite.
## What changes were proposed in this pull request?
This PR proposes to fix lint-check failures and javadoc8 break.
Few errors were introduced as below:
**lint-check failures**
```
[ERROR] src/test/java/org/apache/spark/network/TransportClientFactorySuite.java:[45,1] (imports) RedundantImport: Duplicate import to line 43 - org.apache.spark.network.util.MapConfigProvider.
[ERROR] src/main/java/org/apache/spark/unsafe/types/CalendarInterval.java:[255,10] (modifier) RedundantModifier: Redundant 'final' modifier.
```
**javadoc8**
```
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/StreamingQueryProgress.java:19: error: bad use of '>'
[error] * "max" -> "2016-12-05T20:54:20.827Z" // maximum event time seen in this trigger
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/StreamingQueryProgress.java:20: error: bad use of '>'
[error] * "min" -> "2016-12-05T20:54:20.827Z" // minimum event time seen in this trigger
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/StreamingQueryProgress.java:21: error: bad use of '>'
[error] * "avg" -> "2016-12-05T20:54:20.827Z" // average event time seen in this trigger
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/StreamingQueryProgress.java:22: error: bad use of '>'
[error] * "watermark" -> "2016-12-05T20:54:20.827Z" // watermark used in this trigger
[error]
```
## How was this patch tested?
Manually checked as below:
**lint-check failures**
```
./dev/lint-java
Checkstyle checks passed.
```
**javadoc8**
This seems hidden in the API doc but I manually checked after removing access modifier as below:
It looks not rendering properly (scaladoc).
After this PR, it renders as below:
- scaladoc
- javadoc
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16307 from HyukjinKwon/lint-javadoc8.
## What changes were proposed in this pull request?
A vectorized parquet reader fails to read column data if data schema and partition schema overlap with each other and inferred types in the partition schema differ from ones in the data schema. An example code to reproduce this bug is as follows;
```
scala> case class A(a: Long, b: Int)
scala> val as = Seq(A(1, 2))
scala> spark.createDataFrame(as).write.parquet("/data/a=1/")
scala> val df = spark.read.parquet("/data/")
scala> df.printSchema
root
|-- a: long (nullable = true)
|-- b: integer (nullable = true)
scala> df.collect
java.lang.NullPointerException
at org.apache.spark.sql.execution.vectorized.OnHeapColumnVector.getLong(OnHeapColumnVector.java:283)
at org.apache.spark.sql.execution.vectorized.ColumnarBatch$Row.getLong(ColumnarBatch.java:191)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown Source)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown Source)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)
```
The root cause is that a logical layer (`HadoopFsRelation`) and a physical layer (`VectorizedParquetRecordReader`) have a different assumption on partition schema; the logical layer trusts the data schema to infer the type the overlapped partition columns, and, on the other hand, the physical layer trusts partition schema which is inferred from path string. To fix this bug, this pr simply updates `HadoopFsRelation.schema` to respect the partition columns position in data schema and respect the partition columns type in partition schema.
## How was this patch tested?
Add tests in `ParquetPartitionDiscoverySuite`
Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>
Closes#16030 from maropu/SPARK-18108.
## What changes were proposed in this pull request?
This PR adds StreamingQueryWrapper to make StreamExecution and progress classes serializable because it is too easy for it to get captured with normal usage. If StreamingQueryWrapper gets captured in a closure but no place calls its methods, it should not fail the Spark tasks. However if its methods are called, then this PR will throw a better message.
## How was this patch tested?
`test("StreamingQuery should be Serializable but cannot be used in executors")`
`test("progress classes should be Serializable")`
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16272 from zsxwing/SPARK-18850.
## What changes were proposed in this pull request?
percentile_approx is the name used in Hive, and approx_percentile is the name used in Presto. approx_percentile is actually more consistent with our approx_count_distinct. Given the cost to alias SQL functions is low (one-liner), it'd be better to just alias them so it is easier to use.
## How was this patch tested?
Technically I could add an end-to-end test to verify this one-line change, but it seemed too trivial to me.
Author: Reynold Xin <rxin@databricks.com>
Closes#16300 from rxin/SPARK-18892.
## What changes were proposed in this pull request?
Use `recentProgress` instead of `lastProgress` and filter out last non-zero value. Also add eventually to the latest assertQuery similar to first `assertQuery`
## How was this patch tested?
Ran test 1000 times
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#16287 from brkyvz/SPARK-18868.
## What changes were proposed in this pull request?
When starting a stream with a lot of backfill and maxFilesPerTrigger, the user could often want to start with most recent files first. This would let you keep low latency for recent data and slowly backfill historical data.
This PR adds a new option `latestFirst` to control this behavior. When it's true, `FileStreamSource` will sort the files by the modified time from latest to oldest, and take the first `maxFilesPerTrigger` files as a new batch.
## How was this patch tested?
The added test.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16251 from zsxwing/newest-first.
## What changes were proposed in this pull request?
Check whether Aggregation operators on a streaming subplan have aggregate expressions with isDistinct = true.
## How was this patch tested?
Added unit test
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16289 from tdas/SPARK-18870.
## What changes were proposed in this pull request?
Right now, once a user set the comment of a column with create table command, he/she cannot update the comment. It will be useful to provide a public interface (e.g. SQL) to do that.
This PR implements the following SQL statement:
```
ALTER TABLE table [PARTITION partition_spec]
CHANGE [COLUMN] column_old_name column_new_name column_dataType
[COMMENT column_comment]
[FIRST | AFTER column_name];
```
For further expansion, we could support alter `name`/`dataType`/`index` of a column too.
## How was this patch tested?
Add new test cases in `ExternalCatalogSuite` and `SessionCatalogSuite`.
Add sql file test for `ALTER TABLE CHANGE COLUMN` statement.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#15717 from jiangxb1987/change-column.
## What changes were proposed in this pull request?
After the bug fix in SPARK-18854, TreeNode.apply now returns TreeNode[_] rather than a more specific type. It would be easier for interactive debugging to introduce a function that returns the BaseType.
## How was this patch tested?
N/A - this is a developer only feature used for interactive debugging. As long as it compiles, it should be good to go. I tested this in spark-shell.
Author: Reynold Xin <rxin@databricks.com>
Closes#16288 from rxin/SPARK-18869.
## What changes were proposed in this pull request?
In `DataSource`, if the table is not analyzed, we will use 0 as the default value for table size. This is dangerous, we may broadcast a large table and cause OOM. We should use `defaultSizeInBytes` instead.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16280 from cloud-fan/bug.
### What changes were proposed in this pull request?
Below are the files/directories generated for three inserts againsts a Hive table:
```
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-29_149_4298858301766472202-1
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-29_149_4298858301766472202-1/-ext-10000
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-29_149_4298858301766472202-1/-ext-10000/._SUCCESS.crc
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-29_149_4298858301766472202-1/-ext-10000/.part-00000.crc
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-29_149_4298858301766472202-1/-ext-10000/_SUCCESS
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-29_149_4298858301766472202-1/-ext-10000/part-00000
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_454_6445008511655931341-1
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_454_6445008511655931341-1/-ext-10000
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_454_6445008511655931341-1/-ext-10000/._SUCCESS.crc
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_454_6445008511655931341-1/-ext-10000/.part-00000.crc
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_454_6445008511655931341-1/-ext-10000/_SUCCESS
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_454_6445008511655931341-1/-ext-10000/part-00000
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_722_3388423608658711001-1
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_722_3388423608658711001-1/-ext-10000
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_722_3388423608658711001-1/-ext-10000/._SUCCESS.crc
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_722_3388423608658711001-1/-ext-10000/.part-00000.crc
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_722_3388423608658711001-1/-ext-10000/_SUCCESS
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.hive-staging_hive_2016-12-03_20-56-30_722_3388423608658711001-1/-ext-10000/part-00000
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.part-00000.crc
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/part-00000
```
The first 18 files are temporary. We do not drop it until the end of JVM termination. If JVM does not appropriately terminate, these temporary files/directories will not be dropped.
Only the last two files are needed, as shown below.
```
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/.part-00000.crc
/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/spark-41eaa5ce-0288-471e-bba1-09cc482813ff/part-00000
```
The temporary files/directories could accumulate a lot when we issue many inserts, since each insert generats at least six files. This could eat a lot of spaces and slow down the JVM termination. When the JVM does not terminates approprately, the files might not be dropped.
This PR is to drop the created staging files and temporary data files after each insert/CTAS.
### How was this patch tested?
Added a test case
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16134 from gatorsmile/deleteFiles.
## What changes were proposed in this pull request?
This is a bug introduced by subquery handling. numberedTreeString (which uses generateTreeString under the hood) numbers trees including innerChildren (used to print subqueries), but apply (which uses getNodeNumbered) ignores innerChildren. As a result, apply(i) would return the wrong plan node if there are subqueries.
This patch fixes the bug.
## How was this patch tested?
Added a test case in SubquerySuite.scala to test both the depth-first traversal of numbering as well as making sure the two methods are consistent.
Author: Reynold Xin <rxin@databricks.com>
Closes#16277 from rxin/SPARK-18854.
## What changes were proposed in this pull request?
Right now `StreamingQuery.lastProgress` throws NoSuchElementException and it's hard to be used in Python since Python user will just see Py4jError.
This PR just makes it return null instead.
## How was this patch tested?
`test("lastProgress should be null when recentProgress is empty")`
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16273 from zsxwing/SPARK-18852.
## What changes were proposed in this pull request?
This patch reduces the default number element estimation for arrays and maps from 100 to 1. The issue with the 100 number is that when nested (e.g. an array of map), 100 * 100 would be used as the default size. This sounds like just an overestimation which doesn't seem that bad (since it is usually better to overestimate than underestimate). However, due to the way we assume the size output for Project (new estimated column size / old estimated column size), this overestimation can become underestimation. It is actually in general in this case safer to assume 1 default element.
## How was this patch tested?
This should be covered by existing tests.
Author: Reynold Xin <rxin@databricks.com>
Closes#16274 from rxin/SPARK-18853.
## What changes were proposed in this pull request?
Currently, `FileSourceStrategy` does not handle the case when the pushed-down filter is `Literal(null)` and removes it at the post-filter in Spark-side.
For example, the codes below:
```scala
val df = Seq(Tuple1(Some(true)), Tuple1(None), Tuple1(Some(false))).toDF()
df.filter($"_1" === "true").explain(true)
```
shows it keeps `null` properly.
```
== Parsed Logical Plan ==
'Filter ('_1 = true)
+- LocalRelation [_1#17]
== Analyzed Logical Plan ==
_1: boolean
Filter (cast(_1#17 as double) = cast(true as double))
+- LocalRelation [_1#17]
== Optimized Logical Plan ==
Filter (isnotnull(_1#17) && null)
+- LocalRelation [_1#17]
== Physical Plan ==
*Filter (isnotnull(_1#17) && null) << Here `null` is there
+- LocalTableScan [_1#17]
```
However, when we read it back from Parquet,
```scala
val path = "/tmp/testfile"
df.write.parquet(path)
spark.read.parquet(path).filter($"_1" === "true").explain(true)
```
`null` is removed at the post-filter.
```
== Parsed Logical Plan ==
'Filter ('_1 = true)
+- Relation[_1#11] parquet
== Analyzed Logical Plan ==
_1: boolean
Filter (cast(_1#11 as double) = cast(true as double))
+- Relation[_1#11] parquet
== Optimized Logical Plan ==
Filter (isnotnull(_1#11) && null)
+- Relation[_1#11] parquet
== Physical Plan ==
*Project [_1#11]
+- *Filter isnotnull(_1#11) << Here `null` is missing
+- *FileScan parquet [_1#11] Batched: true, Format: ParquetFormat, Location: InMemoryFileIndex[file:/tmp/testfile], PartitionFilters: [null], PushedFilters: [IsNotNull(_1)], ReadSchema: struct<_1:boolean>
```
This PR fixes it to keep it properly. In more details,
```scala
val partitionKeyFilters =
ExpressionSet(normalizedFilters.filter(_.references.subsetOf(partitionSet)))
```
This keeps this `null` in `partitionKeyFilters` as `Literal` always don't have `children` and `references` is being empty which is always the subset of `partitionSet`.
And then in
```scala
val afterScanFilters = filterSet -- partitionKeyFilters
```
`null` is always removed from the post filter. So, if the referenced fields are empty, it should be applied into data columns too.
After this PR, it becomes as below:
```
== Parsed Logical Plan ==
'Filter ('_1 = true)
+- Relation[_1#276] parquet
== Analyzed Logical Plan ==
_1: boolean
Filter (cast(_1#276 as double) = cast(true as double))
+- Relation[_1#276] parquet
== Optimized Logical Plan ==
Filter (isnotnull(_1#276) && null)
+- Relation[_1#276] parquet
== Physical Plan ==
*Project [_1#276]
+- *Filter (isnotnull(_1#276) && null)
+- *FileScan parquet [_1#276] Batched: true, Format: ParquetFormat, Location: InMemoryFileIndex[file:/private/var/folders/9j/gf_c342d7d150mwrxvkqnc180000gn/T/spark-a5d59bdb-5b..., PartitionFilters: [null], PushedFilters: [IsNotNull(_1)], ReadSchema: struct<_1:boolean>
```
## How was this patch tested?
Unit test in `FileSourceStrategySuite`
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16184 from HyukjinKwon/SPARK-18753.
## What changes were proposed in this pull request?
Currently, some tests are being failed and hanging on Windows due to this problem. For the reason in SPARK-18718, some tests using `local-cluster` mode were disabled on Windows due to the length limitation by paths given to classpaths.
The limitation seems roughly 32K (see the [blog in MS](https://blogs.msdn.microsoft.com/oldnewthing/20031210-00/?p=41553/) and [another reference](https://support.thoughtworks.com/hc/en-us/articles/213248526-Getting-around-maximum-command-line-length-is-32767-characters-on-Windows)) but in `local-cluster` mode, executors were being launched as processes with the command such as [here](https://gist.github.com/HyukjinKwon/5bc81061c250d4af5a180869b59d42ea) in (only) tests.
This length is roughly 40K due to the classpaths given to `java` command. However, it seems duplicates are almost half of them. So, if we deduplicate the paths, it seems reduced to roughly 20K with the command, [here](https://gist.github.com/HyukjinKwon/dad0c8db897e5e094684a2dc6a417790).
Maybe, we should consider as some more paths are added in the future but it seems better than disabling all the tests for now with minimised changes.
Therefore, this PR proposes to deduplicate the paths in classpaths in case of launching executors as processes in `local-cluster` mode.
## How was this patch tested?
Existing tests in `ShuffleSuite` and `BroadcastJoinSuite` manually via AppVeyor
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16266 from HyukjinKwon/disable-local-cluster-tests.
## What changes were proposed in this pull request?
Move the checking of GROUP BY column in correlated scalar subquery from CheckAnalysis
to Analysis to fix a regression caused by SPARK-18504.
This problem can be reproduced with a simple script now.
Seq((1,1)).toDF("pk","pv").createOrReplaceTempView("p")
Seq((1,1)).toDF("ck","cv").createOrReplaceTempView("c")
sql("select * from p,c where p.pk=c.ck and c.cv = (select avg(c1.cv) from c c1 where c1.ck = p.pk)").show
The requirements are:
1. We need to reference the same table twice in both the parent and the subquery. Here is the table c.
2. We need to have a correlated predicate but to a different table. Here is from c (as c1) in the subquery to p in the parent.
3. We will then "deduplicate" c1.ck in the subquery to `ck#<n1>#<n2>` at `Project` above `Aggregate` of `avg`. Then when we compare `ck#<n1>#<n2>` and the original group by column `ck#<n1>` by their canonicalized form, which is #<n2> != #<n1>. That's how we trigger the exception added in SPARK-18504.
## How was this patch tested?
SubquerySuite and a simplified version of TPCDS-Q32
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#16246 from nsyca/18814.
## What changes were proposed in this pull request?
`OverwriteOptions` was introduced in https://github.com/apache/spark/pull/15705, to carry the information of static partitions. However, after further refactor, this information becomes duplicated and we can remove `OverwriteOptions`.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15995 from cloud-fan/overwrite.
## What changes were proposed in this pull request?
Add implicit encoders for BigDecimal, timestamp and date.
## How was this patch tested?
Add an unit test. Pass build, unit tests, and some tests below .
Before:
```
scala> spark.createDataset(Seq(new java.math.BigDecimal(10)))
<console>:24: error: Unable to find encoder for type stored in a Dataset. Primitive types (Int, String, etc) and Product types (case classes) are supported by importing spark.implicits._ Support for serializing other types will be added in future releases.
spark.createDataset(Seq(new java.math.BigDecimal(10)))
^
scala>
```
After:
```
scala> spark.createDataset(Seq(new java.math.BigDecimal(10)))
res0: org.apache.spark.sql.Dataset[java.math.BigDecimal] = [value: decimal(38,18)]
```
Author: Weiqing Yang <yangweiqing001@gmail.com>
Closes#16176 from weiqingy/SPARK-18746.
## What changes were proposed in this pull request?
- Changed `StreamingQueryProgress.watermark` to `StreamingQueryProgress.queryTimestamps` which is a `Map[String, String]` containing the following keys: "eventTime.max", "eventTime.min", "eventTime.avg", "processingTime", "watermark". All of them UTC formatted strings.
- Renamed `StreamingQuery.timestamp` to `StreamingQueryProgress.triggerTimestamp` to differentiate from `queryTimestamps`. It has the timestamp of when the trigger was started.
## How was this patch tested?
Updated tests
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16258 from tdas/SPARK-18834.
## What changes were proposed in this pull request?
Change the statement `SHOW TABLES [EXTENDED] [(IN|FROM) database_name] [[LIKE] 'identifier_with_wildcards'] [PARTITION(partition_spec)]` to the following statements:
- SHOW TABLES [(IN|FROM) database_name] [[LIKE] 'identifier_with_wildcards']
- SHOW TABLE EXTENDED [(IN|FROM) database_name] LIKE 'identifier_with_wildcards' [PARTITION(partition_spec)]
After this change, the statements `SHOW TABLE/SHOW TABLES` have the same syntax with that HIVE has.
## How was this patch tested?
Modified the test sql file `show-tables.sql`;
Modified the test suite `DDLSuite`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#16262 from jiangxb1987/show-table-extended.
## What changes were proposed in this pull request?
Some places in SQL may call `RpcEndpointRef.askWithRetry` (e.g., ParquetFileFormat.buildReader -> SparkContext.broadcast -> ... -> BlockManagerMaster.updateBlockInfo -> RpcEndpointRef.askWithRetry), which will finally call `Await.result`. It may cause `java.lang.IllegalArgumentException: spark.sql.execution.id is already set` when running in Scala ForkJoinPool.
This PR includes the following changes to fix this issue:
- Remove `ThreadUtils.awaitResult`
- Rename `ThreadUtils. awaitResultInForkJoinSafely` to `ThreadUtils.awaitResult`
- Replace `Await.result` in RpcTimeout with `ThreadUtils.awaitResult`.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16230 from zsxwing/fix-SPARK-13747.
## What changes were proposed in this pull request?
Before hive 1.1, when inserting into a table, hive will create the staging directory under a common scratch directory. After the writing is finished, hive will simply empty the table directory and move the staging directory to it.
After hive 1.1, hive will create the staging directory under the table directory, and when moving staging directory to table directory, hive will still empty the table directory, but will exclude the staging directory there.
In `InsertIntoHiveTable`, we simply copy the code from hive 1.2, which means we will always create the staging directory under the table directory, no matter what the hive version is. This causes problems if the hive version is prior to 1.1, because the staging directory will be removed by hive when hive is trying to empty the table directory.
This PR copies the code from hive 0.13, so that we have 2 branches to create staging directory. If hive version is prior to 1.1, we'll go to the old style branch(i.e. create the staging directory under a common scratch directory), else, go to the new style branch(i.e. create the staging directory under the table directory)
## How was this patch tested?
new test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16104 from cloud-fan/hive-0.13.
## What changes were proposed in this pull request?
I **believe** that I _only_ removed duplicated code (that adds nothing but noise). I'm gonna remove the comment after Jenkins has built the changes with no issues and Spark devs has agreed to include the changes.
Remove explicit `RDD` and `Partition` overrides (that turn out code duplication)
## How was this patch tested?
Local build. Awaiting Jenkins.
…cation)
Author: Jacek Laskowski <jacek@japila.pl>
Closes#16145 from jaceklaskowski/rdd-overrides-removed.
## What changes were proposed in this pull request?
Fixes compile errors in generated code when user has case class with a `scala.collections.immutable.Map` instead of a `scala.collections.Map`. Since ArrayBasedMapData.toScalaMap returns the immutable version we can make it work with both.
## How was this patch tested?
Additional unit tests.
Author: Andrew Ray <ray.andrew@gmail.com>
Closes#16161 from aray/fix-map-codegen.
## What changes were proposed in this pull request?
Major change in this PR:
- Add `pendingQueryNames` and `pendingQueryIds` to track that are going to start but not yet put into `activeQueries` so that we don't need to hold a lock when starting a query.
Minor changes:
- Fix a potential NPE when the user sets `checkpointLocation` using SQLConf but doesn't specify a query name.
- Add missing docs in `StreamingQueryListener`
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16220 from zsxwing/SPARK-18796.
## What changes were proposed in this pull request?
Cloudera put `/var/run/cloudera-scm-agent/process/15000-hive-HIVEMETASTORE/hive-site.xml` as the configuration file for the Hive Metastore Server, where `hive.metastore.try.direct.sql=false`. But Spark isn't reading this configuration file and get default value `hive.metastore.try.direct.sql=true`. As mallman said, we should use `getMetaConf` method to obtain the original configuration from Hive Metastore Server. I have tested this method few times and the return value is always consistent with Hive Metastore Server.
## How was this patch tested?
The existing tests.
Author: Yuming Wang <wgyumg@gmail.com>
Closes#16122 from wangyum/SPARK-18681.
The value of the "isSrcLocal" parameter passed to Hive's loadTable and
loadPartition methods needs to be set according to the user query (e.g.
"LOAD DATA LOCAL"), and not the current code that tries to guess what
it should be.
For existing versions of Hive the current behavior is probably ok, but
some recent changes in the Hive code changed the semantics slightly,
making code that sets "isSrcLocal" to "true" incorrectly to do the
wrong thing. It would end up moving the parent directory of the files
into the final location, instead of the file themselves, resulting
in a table that cannot be read.
I modified HiveCommandSuite so that existing "LOAD DATA" tests are run
both in local and non-local mode, since the semantics are slightly different.
The tests include a few new checks to make sure the semantics follow
what Hive describes in its documentation.
Tested with existing unit tests and also ran some Hive integration tests
with a version of Hive containing the changes that surfaced the problem.
Author: Marcelo Vanzin <vanzin@cloudera.com>
Closes#16179 from vanzin/SPARK-18752.
The problem is if it is run with no fix throws an exception and causes the following error:
"Cannot specify a column width on data type bit."
The problem stems from the fact that the "java.sql.types.BIT" type is mapped as BIT[n] that really must be mapped as BIT.
This concerns the type Boolean.
As for the type String with maximum length of characters it must be mapped as VARCHAR (MAX) instead of TEXT which is a type deprecated in SQLServer.
Here is the list of mappings for SQL Server:
https://msdn.microsoft.com/en-us/library/ms378878(v=sql.110).aspxCloses#13944 from meknio/master.
## What changes were proposed in this pull request?
Instead of only keeping the minimum number of offsets around, we should keep enough information to allow us to roll back n batches and reexecute the stream starting from a given point. In particular, we should create a config in SQLConf, spark.sql.streaming.retainedBatches that defaults to 100 and ensure that we keep enough log files in the following places to roll back the specified number of batches:
the offsets that are present in each batch
versions of the state store
the files lists stored for the FileStreamSource
the metadata log stored by the FileStreamSink
marmbrus zsxwing
## How was this patch tested?
The following tests were added.
### StreamExecution offset metadata
Test added to StreamingQuerySuite that ensures offset metadata is garbage collected according to minBatchesRetain
### CompactibleFileStreamLog
Tests added in CompactibleFileStreamLogSuite to ensure that logs are purged starting before the first compaction file that proceeds the current batch id - minBatchesToRetain.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Tyson Condie <tcondie@gmail.com>
Closes#16219 from tcondie/offset_hist.
## What changes were proposed in this pull request?
After https://github.com/apache/spark/pull/15620 , all of the Maven-based 2.0 Jenkins jobs time out consistently. As I pointed out in https://github.com/apache/spark/pull/15620#discussion_r91829129 , it seems that the regression test is an overkill and may hit constants pool size limitation, which is a known issue and hasn't been fixed yet.
Since #15620 only fix the code size limitation problem, we can simplify the test to avoid hitting constants pool size limitation.
## How was this patch tested?
test only change
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16244 from cloud-fan/minor.
## What changes were proposed in this pull request?
During column stats collection, average and max length will be null if a column of string/binary type has only null values. To fix this, I use default size when avg/max length is null.
## How was this patch tested?
Add a test for handling null columns
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#16243 from wzhfy/nullStats.
## What changes were proposed in this pull request?
This PR proposes to fix some tests being failed on Windows as below for several problems.
### Incorrect path handling
- FileSuite
```
[info] - binary file input as byte array *** FAILED *** (500 milliseconds)
[info] "file:/C:/projects/spark/target/tmp/spark-e7c3a3b8-0a4b-4a7f-9ebe-7c4883e48624/record-bytestream-00000.bin" did not contain "C:\projects\spark\target\tmp\spark-e7c3a3b8-0a4b-4a7f-9ebe-7c4883e48624\record-bytestream-00000.bin" (FileSuite.scala:258)
[info] org.scalatest.exceptions.TestFailedException:
[info] at org.scalatest.Assertions$class.newAssertionFailedException(Assertions.scala:500)
...
```
```
[info] - Get input files via old Hadoop API *** FAILED *** (1 second, 94 milliseconds)
[info] Set("/C:/projects/spark/target/tmp/spark-cf5b1f8b-c5ed-43e0-8d17-546ebbfa8200/output/part-00000", "/C:/projects/spark/target/tmp/spark-cf5b1f8b-c5ed-43e0-8d17-546ebbfa8200/output/part-00001") did not equal Set("C:\projects\spark\target\tmp\spark-cf5b1f8b-c5ed-43e0-8d17-546ebbfa8200\output/part-00000", "C:\projects\spark\target\tmp\spark-cf5b1f8b-c5ed-43e0-8d17-546ebbfa8200\output/part-00001") (FileSuite.scala:535)
[info] org.scalatest.exceptions.TestFailedException:
[info] at org.scalatest.Assertions$class.newAssertionFailedException(Assertions.scala:500)
...
```
```
[info] - Get input files via new Hadoop API *** FAILED *** (313 milliseconds)
[info] Set("/C:/projects/spark/target/tmp/spark-12bc1540-1111-4df6-9c4d-79e0e614407c/output/part-00000", "/C:/projects/spark/target/tmp/spark-12bc1540-1111-4df6-9c4d-79e0e614407c/output/part-00001") did not equal Set("C:\projects\spark\target\tmp\spark-12bc1540-1111-4df6-9c4d-79e0e614407c\output/part-00000", "C:\projects\spark\target\tmp\spark-12bc1540-1111-4df6-9c4d-79e0e614407c\output/part-00001") (FileSuite.scala:549)
[info] org.scalatest.exceptions.TestFailedException:
...
```
- TaskResultGetterSuite
```
[info] - handling results larger than max RPC message size *** FAILED *** (1 second, 579 milliseconds)
[info] 1 did not equal 0 Expect result to be removed from the block manager. (TaskResultGetterSuite.scala:129)
[info] org.scalatest.exceptions.TestFailedException:
[info] ...
[info] Cause: java.net.URISyntaxException: Illegal character in path at index 12: string:///C:\projects\spark\target\tmp\spark-93c485af-68da-440f-a907-aac7acd5fc25\repro\MyException.java
[info] at java.net.URI$Parser.fail(URI.java:2848)
[info] at java.net.URI$Parser.checkChars(URI.java:3021)
...
```
```
[info] - failed task deserialized with the correct classloader (SPARK-11195) *** FAILED *** (0 milliseconds)
[info] java.lang.IllegalArgumentException: Illegal character in path at index 12: string:///C:\projects\spark\target\tmp\spark-93c485af-68da-440f-a907-aac7acd5fc25\repro\MyException.java
[info] at java.net.URI.create(URI.java:852)
...
```
- SparkSubmitSuite
```
[info] java.lang.IllegalArgumentException: Illegal character in path at index 12: string:///C:\projects\spark\target\tmp\1481210831381-0\870903339\MyLib.java
[info] at java.net.URI.create(URI.java:852)
[info] at org.apache.spark.TestUtils$.org$apache$spark$TestUtils$$createURI(TestUtils.scala:112)
...
```
### Incorrect separate for JarEntry
After the path fix from above, then `TaskResultGetterSuite` throws another exception as below:
```
[info] - failed task deserialized with the correct classloader (SPARK-11195) *** FAILED *** (907 milliseconds)
[info] java.lang.ClassNotFoundException: repro.MyException
[info] at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
...
```
This is because `Paths.get` concatenates the given paths to an OS-specific path (Windows `\` and Linux `/`). However, for `JarEntry` we should comply ZIP specification meaning it should be always `/` according to ZIP specification.
See `4.4.17 file name: (Variable)` in https://pkware.cachefly.net/webdocs/casestudies/APPNOTE.TXT
### Long path problem on Windows
Some tests in `ShuffleSuite` via `ShuffleNettySuite` were skipped due to the same reason with SPARK-18718
## How was this patch tested?
Manually via AppVeyor.
**Before**
- `FileSuite`, `TaskResultGetterSuite`,`SparkSubmitSuite`
https://ci.appveyor.com/project/spark-test/spark/build/164-tmp-windows-base (please grep each to check each)
- `ShuffleSuite`
https://ci.appveyor.com/project/spark-test/spark/build/157-tmp-windows-base
**After**
- `FileSuite`
https://ci.appveyor.com/project/spark-test/spark/build/166-FileSuite
- `TaskResultGetterSuite`
https://ci.appveyor.com/project/spark-test/spark/build/173-TaskResultGetterSuite
- `SparkSubmitSuite`
https://ci.appveyor.com/project/spark-test/spark/build/167-SparkSubmitSuite
- `ShuffleSuite`
https://ci.appveyor.com/project/spark-test/spark/build/176-ShuffleSuite
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16234 from HyukjinKwon/test-errors-windows.
### What changes were proposed in this pull request?
Currently, when users use Python UDF in Filter, BatchEvalPython is always generated below FilterExec. However, not all the predicates need to be evaluated after Python UDF execution. Thus, this PR is to push down the determinisitc predicates through `BatchEvalPython`.
```Python
>>> df = spark.createDataFrame([(1, "1"), (2, "2"), (1, "2"), (1, "2")], ["key", "value"])
>>> from pyspark.sql.functions import udf, col
>>> from pyspark.sql.types import BooleanType
>>> my_filter = udf(lambda a: a < 2, BooleanType())
>>> sel = df.select(col("key"), col("value")).filter((my_filter(col("key"))) & (df.value < "2"))
>>> sel.explain(True)
```
Before the fix, the plan looks like
```
== Optimized Logical Plan ==
Filter ((isnotnull(value#1) && <lambda>(key#0L)) && (value#1 < 2))
+- LogicalRDD [key#0L, value#1]
== Physical Plan ==
*Project [key#0L, value#1]
+- *Filter ((isnotnull(value#1) && pythonUDF0#9) && (value#1 < 2))
+- BatchEvalPython [<lambda>(key#0L)], [key#0L, value#1, pythonUDF0#9]
+- Scan ExistingRDD[key#0L,value#1]
```
After the fix, the plan looks like
```
== Optimized Logical Plan ==
Filter ((isnotnull(value#1) && <lambda>(key#0L)) && (value#1 < 2))
+- LogicalRDD [key#0L, value#1]
== Physical Plan ==
*Project [key#0L, value#1]
+- *Filter pythonUDF0#9: boolean
+- BatchEvalPython [<lambda>(key#0L)], [key#0L, value#1, pythonUDF0#9]
+- *Filter (isnotnull(value#1) && (value#1 < 2))
+- Scan ExistingRDD[key#0L,value#1]
```
### How was this patch tested?
Added both unit test cases for `BatchEvalPythonExec` and also add an end-to-end test case in Python test suite.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16193 from gatorsmile/pythonUDFPredicatePushDown.
## What changes were proposed in this pull request?
1. In SparkStrategies.canBroadcast, I will add the check plan.statistics.sizeInBytes >= 0
2. In LocalRelations.statistics, when calculate the statistics, I will change the size to BigInt so it won't overflow.
## How was this patch tested?
I will add a test case to make sure the statistics.sizeInBytes won't overflow.
Author: Huaxin Gao <huaxing@us.ibm.com>
Closes#16175 from huaxingao/spark-17460.
## What changes were proposed in this pull request?
When you start a stream, if we are trying to resolve the source of the stream, for example if we need to resolve partition columns, this could take a long time. This long execution time should not block the main thread where `query.start()` was called on. It should happen in the stream execution thread possibly before starting any triggers.
## How was this patch tested?
Unit test added. Made sure test fails with no code changes.
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#16238 from brkyvz/SPARK-18811.
## What changes were proposed in this pull request?
This PR avoids that a result of a cast `toInt` is negative due to signed integer overflow (e.g. 0x0000_0000_1???????L.toInt < 0 ). This PR performs casts after we can ensure the value is within range of signed integer (the result of `max(array.length, ???)` is always integer).
## How was this patch tested?
Manually executed query68 of TPC-DS with 100TB
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#16235 from kiszk/SPARK-18745.
## What changes were proposed in this pull request?
* This PR changes `JVMObjectTracker` from `object` to `class` and let its instance associated with each RBackend. So we can manage the lifecycle of JVM objects when there are multiple `RBackend` sessions. `RBackend.close` will clear the object tracker explicitly.
* I assume that `SQLUtils` and `RRunner` do not need to track JVM instances, which could be wrong.
* Small refactor of `SerDe.sqlSerDe` to increase readability.
## How was this patch tested?
* Added unit tests for `JVMObjectTracker`.
* Wait for Jenkins to run full tests.
Author: Xiangrui Meng <meng@databricks.com>
Closes#16154 from mengxr/SPARK-17822.
## What changes were proposed in this pull request?
Typo fixes
## How was this patch tested?
Local build. Awaiting the official build.
Author: Jacek Laskowski <jacek@japila.pl>
Closes#16144 from jaceklaskowski/typo-fixes.
## What changes were proposed in this pull request?
Make stateful udf as nondeterministic
## How was this patch tested?
Add new test cases with both Stateful and Stateless UDF.
Without the patch, the test cases will throw exception:
1 did not equal 10
ScalaTestFailureLocation: org.apache.spark.sql.hive.execution.HiveUDFSuite$$anonfun$21 at (HiveUDFSuite.scala:501)
org.scalatest.exceptions.TestFailedException: 1 did not equal 10
at org.scalatest.Assertions$class.newAssertionFailedException(Assertions.scala:500)
at org.scalatest.FunSuite.newAssertionFailedException(FunSuite.scala:1555)
...
Author: Zhan Zhang <zhanzhang@fb.com>
Closes#16068 from zhzhan/state.
## What changes were proposed in this pull request?
- Changed FileStreamSource to use new FileStreamSourceOffset rather than LongOffset. The field is named as `logOffset` to make it more clear that this is a offset in the file stream log.
- Fixed bug in FileStreamSourceLog, the field endId in the FileStreamSourceLog.get(startId, endId) was not being used at all. No test caught it earlier. Only my updated tests caught it.
Other minor changes
- Dont use batchId in the FileStreamSource, as calling it batch id is extremely miss leading. With multiple sources, it may happen that a new batch has no new data from a file source. So offset of FileStreamSource != batchId after that batch.
## How was this patch tested?
Updated unit test.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16205 from tdas/SPARK-18776.
## What changes were proposed in this pull request?
This patch fixes the format specification in explain for file sources (Parquet and Text formats are the only two that are different from the rest):
Before:
```
scala> spark.read.text("test.text").explain()
== Physical Plan ==
*FileScan text [value#15] Batched: false, Format: org.apache.spark.sql.execution.datasources.text.TextFileFormatxyz, Location: InMemoryFileIndex[file:/scratch/rxin/spark/test.text], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<value:string>
```
After:
```
scala> spark.read.text("test.text").explain()
== Physical Plan ==
*FileScan text [value#15] Batched: false, Format: Text, Location: InMemoryFileIndex[file:/scratch/rxin/spark/test.text], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<value:string>
```
Also closes#14680.
## How was this patch tested?
Verified in spark-shell.
Author: Reynold Xin <rxin@databricks.com>
Closes#16187 from rxin/SPARK-18760.
## What changes were proposed in this pull request?
`input_file_name` doesn't return filename when working with UDF in PySpark. An example shows the problem:
from pyspark.sql.functions import *
from pyspark.sql.types import *
def filename(path):
return path
sourceFile = udf(filename, StringType())
spark.read.json("tmp.json").select(sourceFile(input_file_name())).show()
+---------------------------+
|filename(input_file_name())|
+---------------------------+
| |
+---------------------------+
The cause of this issue is, we group rows in `BatchEvalPythonExec` for batching processing of PythonUDF. Currently we group rows first and then evaluate expressions on the rows. If the data is less than the required number of rows for a group, the iterator will be consumed to the end before the evaluation. However, once the iterator reaches the end, we will unset input filename. So the input_file_name expression can't return correct filename.
This patch fixes the approach to group the batch of rows. We evaluate the expression first and then group evaluated results to batch.
## How was this patch tested?
Added unit test to PySpark.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#16115 from viirya/fix-py-udf-input-filename.
## What changes were proposed in this pull request?
There are some tests failed on Windows due to the wrong format of path and the limitation of path length as below:
This PR proposes both to fix the failed tests by fixing the path for the tests below:
- `InsertSuite`
```
Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.sources.InsertSuite *** ABORTED *** (12 seconds, 547 milliseconds)
org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark arget mpspark-177945ef-9128-42b4-8c07-de31f78bbbd6;
at org.apache.spark.sql.execution.datasources.DataSource$$anonfun$14.apply(DataSource.scala:382)
at org.apache.spark.sql.execution.datasources.DataSource$$anonfun$14.apply(DataSource.scala:370)
at scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:241)
```
- `PathOptionSuite`
```
- path option also exist for write path *** FAILED *** (1 second, 93 milliseconds)
"C:[projectsspark arget mp]spark-5ab34a58-df8d-..." did not equal "C:[\projects\spark\target\tmp\]spark-5ab34a58-df8d-..." (PathOptionSuite.scala:93)
org.scalatest.exceptions.TestFailedException:
at org.scalatest.Assertions$class.newAssertionFailedException(Assertions.scala:500)
at org.scalatest.FunSuite.newAssertionFailedException(FunSuite.scala:1555)
...
```
- `UDFSuite`
```
- SPARK-8005 input_file_name *** FAILED *** (2 seconds, 234 milliseconds)
"file:///C:/projects/spark/target/tmp/spark-e4e5720a-2006-48f9-8b11-797bf59794bf/part-00001-26fb05e4-603d-471d-ae9d-b9549e0c7765.snappy.parquet" did not contain "C:\projects\spark\target\tmp\spark-e4e5720a-2006-48f9-8b11-797bf59794bf" (UDFSuite.scala:67)
org.scalatest.exceptions.TestFailedException:
at org.scalatest.Assertions$class.newAssertionFailedException(Assertions.scala:500)
at org.scalatest.FunSuite.newAssertionFailedException(FunSuite.scala:1555)
...
```
and to skip the tests belows which are being failed on Windows due to path length limitation.
- `SparkLauncherSuite`
```
Test org.apache.spark.launcher.SparkLauncherSuite.testChildProcLauncher failed: java.lang.AssertionError: expected:<0> but was:<1>, took 0.062 sec
at org.apache.spark.launcher.SparkLauncherSuite.testChildProcLauncher(SparkLauncherSuite.java:177)
...
```
The stderr from the process is `The filename or extension is too long` which is equivalent to the one below.
- `BroadcastJoinSuite`
```
04:09:40.882 ERROR org.apache.spark.deploy.worker.ExecutorRunner: Error running executor
java.io.IOException: Cannot run program "C:\Progra~1\Java\jdk1.8.0\bin\java" (in directory "C:\projects\spark\work\app-20161205040542-0000\51658"): CreateProcess error=206, The filename or extension is too long
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at org.apache.spark.deploy.worker.ExecutorRunner.org$apache$spark$deploy$worker$ExecutorRunner$$fetchAndRunExecutor(ExecutorRunner.scala:167)
at org.apache.spark.deploy.worker.ExecutorRunner$$anon$1.run(ExecutorRunner.scala:73)
Caused by: java.io.IOException: CreateProcess error=206, The filename or extension is too long
at java.lang.ProcessImpl.create(Native Method)
at java.lang.ProcessImpl.<init>(ProcessImpl.java:386)
at java.lang.ProcessImpl.start(ProcessImpl.java:137)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
... 2 more
04:09:40.929 ERROR org.apache.spark.deploy.worker.ExecutorRunner: Error running executor
(appearently infinite same error messages)
...
```
## How was this patch tested?
Manually tested via AppVeyor.
**Before**
`InsertSuite`: https://ci.appveyor.com/project/spark-test/spark/build/148-InsertSuite-pr
`PathOptionSuite`: https://ci.appveyor.com/project/spark-test/spark/build/139-PathOptionSuite-pr
`UDFSuite`: https://ci.appveyor.com/project/spark-test/spark/build/143-UDFSuite-pr
`SparkLauncherSuite`: https://ci.appveyor.com/project/spark-test/spark/build/141-SparkLauncherSuite-pr
`BroadcastJoinSuite`: https://ci.appveyor.com/project/spark-test/spark/build/145-BroadcastJoinSuite-pr
**After**
`PathOptionSuite`: https://ci.appveyor.com/project/spark-test/spark/build/140-PathOptionSuite-pr
`SparkLauncherSuite`: https://ci.appveyor.com/project/spark-test/spark/build/142-SparkLauncherSuite-pr
`UDFSuite`: https://ci.appveyor.com/project/spark-test/spark/build/144-UDFSuite-pr
`InsertSuite`: https://ci.appveyor.com/project/spark-test/spark/build/147-InsertSuite-pr
`BroadcastJoinSuite`: https://ci.appveyor.com/project/spark-test/spark/build/149-BroadcastJoinSuite-pr
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16147 from HyukjinKwon/fix-tests.
## What changes were proposed in this pull request?
When `ignoreCorruptFiles` is enabled, it's better to also ignore non-existing files.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16203 from zsxwing/ignore-file-not-found.
## What changes were proposed in this pull request?
Listeners added with `sparkSession.streams.addListener(l)` are added to a SparkSession. So events only from queries in the same session as a listener should be posted to the listener. Currently, all the events gets rerouted through the Spark's main listener bus, that is,
- StreamingQuery posts event to StreamingQueryListenerBus. Only the queries associated with the same session as the bus posts events to it.
- StreamingQueryListenerBus posts event to Spark's main LiveListenerBus as a SparkEvent.
- StreamingQueryListenerBus also subscribes to LiveListenerBus events thus getting back the posted event in a different thread.
- The received is posted to the registered listeners.
The problem is that *all StreamingQueryListenerBuses in all sessions* gets the events and posts them to their listeners. This is wrong.
In this PR, I solve it by making StreamingQueryListenerBus track active queries (by their runIds) when a query posts the QueryStarted event to the bus. This allows the rerouted events to be filtered using the tracked queries.
Note that this list needs to be maintained separately
from the `StreamingQueryManager.activeQueries` because a terminated query is cleared from
`StreamingQueryManager.activeQueries` as soon as it is stopped, but the this ListenerBus must
clear a query only after the termination event of that query has been posted lazily, much after the query has been terminated.
Credit goes to zsxwing for coming up with the initial idea.
## How was this patch tested?
Updated test harness code to use the correct session, and added new unit test.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16186 from tdas/SPARK-18758.
## What changes were proposed in this pull request?
`makeRootConverter` is only called with a `StructType` value. By making this method less general we can remove pattern matches, which are never actually hit outside of the test suite.
## How was this patch tested?
The existing tests.
Author: Nathan Howell <nhowell@godaddy.com>
Closes#16084 from NathanHowell/SPARK-18654.
Based on an informal survey, users find this option easier to understand / remember.
Author: Michael Armbrust <michael@databricks.com>
Closes#16182 from marmbrus/renameRecentProgress.
## What changes were proposed in this pull request?
Fixed the following failures:
```
org.scalatest.exceptions.TestFailedDueToTimeoutException: The code passed to eventually never returned normally. Attempted 3745 times over 1.0000790851666665 minutes. Last failure message: assertion failed: failOnDataLoss-0 not deleted after timeout.
```
```
sbt.ForkMain$ForkError: org.apache.spark.sql.streaming.StreamingQueryException: Query query-66 terminated with exception: null
at org.apache.spark.sql.execution.streaming.StreamExecution.org$apache$spark$sql$execution$streaming$StreamExecution$$runBatches(StreamExecution.scala:252)
at org.apache.spark.sql.execution.streaming.StreamExecution$$anon$1.run(StreamExecution.scala:146)
Caused by: sbt.ForkMain$ForkError: java.lang.NullPointerException: null
at java.util.ArrayList.addAll(ArrayList.java:577)
at org.apache.kafka.clients.Metadata.getClusterForCurrentTopics(Metadata.java:257)
at org.apache.kafka.clients.Metadata.update(Metadata.java:177)
at org.apache.kafka.clients.NetworkClient$DefaultMetadataUpdater.handleResponse(NetworkClient.java:605)
at org.apache.kafka.clients.NetworkClient$DefaultMetadataUpdater.maybeHandleCompletedReceive(NetworkClient.java:582)
at org.apache.kafka.clients.NetworkClient.handleCompletedReceives(NetworkClient.java:450)
at org.apache.kafka.clients.NetworkClient.poll(NetworkClient.java:269)
at org.apache.kafka.clients.consumer.internals.ConsumerNetworkClient.clientPoll(ConsumerNetworkClient.java:360)
at org.apache.kafka.clients.consumer.internals.ConsumerNetworkClient.poll(ConsumerNetworkClient.java:224)
at org.apache.kafka.clients.consumer.internals.ConsumerNetworkClient.poll(ConsumerNetworkClient.java:192)
at org.apache.kafka.clients.consumer.internals.ConsumerNetworkClient.awaitPendingRequests(ConsumerNetworkClient.java:260)
at org.apache.kafka.clients.consumer.internals.AbstractCoordinator.ensureActiveGroup(AbstractCoordinator.java:222)
at org.apache.kafka.clients.consumer.internals.ConsumerCoordinator.ensurePartitionAssignment(ConsumerCoordinator.java:366)
at org.apache.kafka.clients.consumer.KafkaConsumer.pollOnce(KafkaConsumer.java:978)
at org.apache.kafka.clients.consumer.KafkaConsumer.poll(KafkaConsumer.java:938)
at
...
```
## How was this patch tested?
Tested in #16048 by running many times.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16109 from zsxwing/fix-kafka-flaky-test.
## What changes were proposed in this pull request?
It's better to add a warning log when skipping a corrupted file. It will be helpful when we want to finish the job first, then find them in the log and fix these files.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16192 from zsxwing/SPARK-18764.
## What changes were proposed in this pull request?
Fixes AnalysisException for pivot queries that have group by columns that are expressions and not attributes by substituting the expressions output attribute in the second aggregation and final projection.
## How was this patch tested?
existing and additional unit tests
Author: Andrew Ray <ray.andrew@gmail.com>
Closes#16177 from aray/SPARK-17760.
## What changes were proposed in this pull request?
Maven compilation seem to not allow resource is sql/test to be easily referred to in kafka-0-10-sql tests. So moved the kafka-source-offset-version-2.1.0 from sql test resources to kafka-0-10-sql test resources.
## How was this patch tested?
Manually ran maven test
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16183 from tdas/SPARK-18671-1.
## What changes were proposed in this pull request?
Easier to read while debugging as a formatted string (in ISO8601 format) than in millis
## How was this patch tested?
Updated unit tests
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16166 from tdas/SPARK-18734.
## What changes were proposed in this pull request?
To be able to restart StreamingQueries across Spark version, we have already made the logs (offset log, file source log, file sink log) use json. We should added tests with actual json files in the Spark such that any incompatible changes in reading the logs is immediately caught. This PR add tests for FileStreamSourceLog, FileStreamSinkLog, and OffsetSeqLog.
## How was this patch tested?
new unit tests
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16128 from tdas/SPARK-18671.
## What changes were proposed in this pull request?
Many Spark developers often want to test the runtime of some function in interactive debugging and testing. This patch adds a simple time function to SparkSession:
```
scala> spark.time { spark.range(1000).count() }
Time taken: 77 ms
res1: Long = 1000
```
## How was this patch tested?
I tested this interactively in spark-shell.
Author: Reynold Xin <rxin@databricks.com>
Closes#16140 from rxin/SPARK-18714.
## What changes were proposed in this pull request?
I jumped the gun on merging https://github.com/apache/spark/pull/16120, and missed a tiny potential problem. This PR fixes that by changing a val into a def; this should prevent potential serialization/initialization weirdness from happening.
## How was this patch tested?
Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16170 from hvanhovell/SPARK-18634.
## What changes were proposed in this pull request?
Right now ForeachSink creates a new physical plan, so StreamExecution cannot retrieval metrics and watermark.
This PR changes ForeachSink to manually convert InternalRows to objects without creating a new plan.
## How was this patch tested?
`test("foreach with watermark: append")`.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16160 from zsxwing/SPARK-18721.
(Link to Jira issue: https://issues.apache.org/jira/browse/SPARK-18572)
## What changes were proposed in this pull request?
Currently Spark answers the `SHOW PARTITIONS` command by fetching all of the table's partition metadata from the external catalog and constructing partition names therefrom. The Hive client has a `getPartitionNames` method which is many times faster for this purpose, with the performance improvement scaling with the number of partitions in a table.
To test the performance impact of this PR, I ran the `SHOW PARTITIONS` command on two Hive tables with large numbers of partitions. One table has ~17,800 partitions, and the other has ~95,000 partitions. For the purposes of this PR, I'll call the former table `table1` and the latter table `table2`. I ran 5 trials for each table with before-and-after versions of this PR. The results are as follows:
Spark at bdc8153, `SHOW PARTITIONS table1`, times in seconds:
7.901
3.983
4.018
4.331
4.261
Spark at bdc8153, `SHOW PARTITIONS table2`
(Timed out after 10 minutes with a `SocketTimeoutException`.)
Spark at this PR, `SHOW PARTITIONS table1`, times in seconds:
3.801
0.449
0.395
0.348
0.336
Spark at this PR, `SHOW PARTITIONS table2`, times in seconds:
5.184
1.63
1.474
1.519
1.41
Taking the best times from each trial, we get a 12x performance improvement for a table with ~17,800 partitions and at least a 426x improvement for a table with ~95,000 partitions. More significantly, the latter command doesn't even complete with the current code in master.
This is actually a patch we've been using in-house at VideoAmp since Spark 1.1. It's made all the difference in the practical usability of our largest tables. Even with tables with about 1,000 partitions there's a performance improvement of about 2-3x.
## How was this patch tested?
I added a unit test to `VersionsSuite` which tests that the Hive client's `getPartitionNames` method returns the correct number of partitions.
Author: Michael Allman <michael@videoamp.com>
Closes#15998 from mallman/spark-18572-list_partition_names.
## What changes were proposed in this pull request?
Move no data rate limit from StreamExecution to ProgressReporter to make `recentProgresses` and listener events consistent.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16155 from zsxwing/SPARK-18722.
## What changes were proposed in this pull request?
DataSet.na.fill(0) used on a DataSet which has a long value column, it will change the original long value.
The reason is that the type of the function fill's param is Double, and the numeric columns are always cast to double(`fillCol[Double](f, value)`) .
```
def fill(value: Double, cols: Seq[String]): DataFrame = {
val columnEquals = df.sparkSession.sessionState.analyzer.resolver
val projections = df.schema.fields.map { f =>
// Only fill if the column is part of the cols list.
if (f.dataType.isInstanceOf[NumericType] && cols.exists(col => columnEquals(f.name, col))) {
fillCol[Double](f, value)
} else {
df.col(f.name)
}
}
df.select(projections : _*)
}
```
For example:
```
scala> val df = Seq[(Long, Long)]((1, 2), (-1, -2), (9123146099426677101L, 9123146560113991650L)).toDF("a", "b")
df: org.apache.spark.sql.DataFrame = [a: bigint, b: bigint]
scala> df.show
+-------------------+-------------------+
| a| b|
+-------------------+-------------------+
| 1| 2|
| -1| -2|
|9123146099426677101|9123146560113991650|
+-------------------+-------------------+
scala> df.na.fill(0).show
+-------------------+-------------------+
| a| b|
+-------------------+-------------------+
| 1| 2|
| -1| -2|
|9123146099426676736|9123146560113991680|
+-------------------+-------------------+
```
the original values changed [which is not we expected result]:
```
9123146099426677101 -> 9123146099426676736
9123146560113991650 -> 9123146560113991680
```
## How was this patch tested?
unit test added.
Author: root <root@iZbp1gsnrlfzjxh82cz80vZ.(none)>
Closes#15994 from windpiger/nafillMissupOriginalValue.
### What changes were proposed in this pull request?
Our existing withColumn for adding metadata can simply use the existing public withColumn API.
### How was this patch tested?
The existing test cases cover it.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16152 from gatorsmile/withColumnRefactoring.
## What changes were proposed in this pull request?
Here are the major changes in this PR.
- Added the ability to recover `StreamingQuery.id` from checkpoint location, by writing the id to `checkpointLoc/metadata`.
- Added `StreamingQuery.runId` which is unique for every query started and does not persist across restarts. This is to identify each restart of a query separately (same as earlier behavior of `id`).
- Removed auto-generation of `StreamingQuery.name`. The purpose of name was to have the ability to define an identifier across restarts, but since id is precisely that, there is no need for a auto-generated name. This means name becomes purely cosmetic, and is null by default.
- Added `runId` to `StreamingQueryListener` events and `StreamingQueryProgress`.
Implementation details
- Renamed existing `StreamExecutionMetadata` to `OffsetSeqMetadata`, and moved it to the file `OffsetSeq.scala`, because that is what this metadata is tied to. Also did some refactoring to make the code cleaner (got rid of a lot of `.json` and `.getOrElse("{}")`).
- Added the `id` as the new `StreamMetadata`.
- When a StreamingQuery is created it gets or writes the `StreamMetadata` from `checkpointLoc/metadata`.
- All internal logging in `StreamExecution` uses `(name, id, runId)` instead of just `name`
TODO
- [x] Test handling of name=null in json generation of StreamingQueryProgress
- [x] Test handling of name=null in json generation of StreamingQueryListener events
- [x] Test python API of runId
## How was this patch tested?
Updated unit tests and new unit tests
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16113 from tdas/SPARK-18657.
## What changes were proposed in this pull request?
Move DataFrame.collect out of synchronized block so that we can query content in MemorySink when `DataFrame.collect` is running.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16162 from zsxwing/SPARK-18729.
## What changes were proposed in this pull request?
As reported in the Jira, there are some weird issues with exploding Python UDFs in SparkSQL.
The following test code can reproduce it. Notice: the following test code is reported to return wrong results in the Jira. However, as I tested on master branch, it causes exception and so can't return any result.
>>> from pyspark.sql.functions import *
>>> from pyspark.sql.types import *
>>>
>>> df = spark.range(10)
>>>
>>> def return_range(value):
... return [(i, str(i)) for i in range(value - 1, value + 1)]
...
>>> range_udf = udf(return_range, ArrayType(StructType([StructField("integer_val", IntegerType()),
... StructField("string_val", StringType())])))
>>>
>>> df.select("id", explode(range_udf(df.id))).show()
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/spark/python/pyspark/sql/dataframe.py", line 318, in show
print(self._jdf.showString(n, 20))
File "/spark/python/lib/py4j-0.10.4-src.zip/py4j/java_gateway.py", line 1133, in __call__
File "/spark/python/pyspark/sql/utils.py", line 63, in deco
return f(*a, **kw)
File "/spark/python/lib/py4j-0.10.4-src.zip/py4j/protocol.py", line 319, in get_return_value py4j.protocol.Py4JJavaError: An error occurred while calling o126.showString.: java.lang.AssertionError: assertion failed
at scala.Predef$.assert(Predef.scala:156)
at org.apache.spark.sql.execution.CodegenSupport$class.consume(WholeStageCodegenExec.scala:120)
at org.apache.spark.sql.execution.GenerateExec.consume(GenerateExec.scala:57)
The cause of this issue is, in `ExtractPythonUDFs` we insert `BatchEvalPythonExec` to run PythonUDFs in batch. `BatchEvalPythonExec` will add extra outputs (e.g., `pythonUDF0`) to original plan. In above case, the original `Range` only has one output `id`. After `ExtractPythonUDFs`, the added `BatchEvalPythonExec` has two outputs `id` and `pythonUDF0`.
Because the output of `GenerateExec` is given after analysis phase, in above case, it is the combination of `id`, i.e., the output of `Range`, and `col`. But in planning phase, we change `GenerateExec`'s child plan to `BatchEvalPythonExec` with additional output attributes.
It will cause no problem in non wholestage codegen. Because when evaluating the additional attributes are projected out the final output of `GenerateExec`.
However, as `GenerateExec` now supports wholestage codegen, the framework will input all the outputs of the child plan to `GenerateExec`. Then when consuming `GenerateExec`'s output data (i.e., calling `consume`), the number of output attributes is different to the output variables in wholestage codegen.
To solve this issue, this patch only gives the generator's output to `GenerateExec` after analysis phase. `GenerateExec`'s output is the combination of its child plan's output and the generator's output. So when we change `GenerateExec`'s child, its output is still correct.
## How was this patch tested?
Added test cases to PySpark.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#16120 from viirya/fix-py-udf-with-generator.
## What changes were proposed in this pull request?
This is kind of a long-standing bug, it's hidden until https://github.com/apache/spark/pull/15780 , which may add `AssertNotNull` on top of `LambdaVariable` and thus enables subexpression elimination.
However, subexpression elimination will evaluate the common expressions at the beginning, which is invalid for `LambdaVariable`. `LambdaVariable` usually represents loop variable, which can't be evaluated ahead of the loop.
This PR skips expressions containing `LambdaVariable` when doing subexpression elimination.
## How was this patch tested?
updated test in `DatasetAggregatorSuite`
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16143 from cloud-fan/aggregator.
## What changes were proposed in this pull request?
- Add StreamingQuery.explain and exception to Python.
- Fix StreamingQueryException to not expose `OffsetSeq`.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16125 from zsxwing/py-streaming-explain.
## What changes were proposed in this pull request?
We currently have function input_file_name to get the path of the input file, but don't have functions to get the block start offset and length. This patch introduces two functions:
1. input_file_block_start: returns the file block start offset, or -1 if not available.
2. input_file_block_length: returns the file block length, or -1 if not available.
## How was this patch tested?
Updated existing test cases in ColumnExpressionSuite that covered input_file_name to also cover the two new functions.
Author: Reynold Xin <rxin@databricks.com>
Closes#16133 from rxin/SPARK-18702.
## What changes were proposed in this pull request?
Even though in 2.1 creating a partitioned datasource table will not populate the partition data by default (until the user issues MSCK REPAIR TABLE), it seems we still scan the filesystem for no good reason.
We should avoid doing this when the user specifies a schema.
## How was this patch tested?
Perf stat tests.
Author: Eric Liang <ekl@databricks.com>
Closes#16090 from ericl/spark-18661.
## What changes were proposed in this pull request?
Fix for SPARK-18091 which is a bug related to large if expressions causing generated SpecificUnsafeProjection code to exceed JVM code size limit.
This PR changes if expression's code generation to place its predicate, true value and false value expressions' generated code in separate methods in context so as to never generate too long combined code.
## How was this patch tested?
Added a unit test and also tested manually with the application (having transformations similar to the unit test) which caused the issue to be identified in the first place.
Author: Kapil Singh <kapsingh@adobe.com>
Closes#15620 from kapilsingh5050/SPARK-18091-IfCodegenFix.
## What changes were proposed in this pull request?
This fix puts an explicit list of operators that Spark supports for correlated subqueries.
## How was this patch tested?
Run sql/test, catalyst/test and add a new test case on Generate.
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#16046 from nsyca/spark18455.0.
## What changes were proposed in this pull request?
This patch significantly improves the IO / file listing performance of schema inference in Spark's built-in CSV data source.
Previously, this data source used the legacy `SparkContext.hadoopFile` and `SparkContext.hadoopRDD` methods to read files during its schema inference step, causing huge file-listing bottlenecks on the driver.
This patch refactors this logic to use Spark SQL's `text` data source to read files during this step. The text data source still performs some unnecessary file listing (since in theory we already have resolved the table prior to schema inference and therefore should be able to scan without performing _any_ extra listing), but that listing is much faster and takes place in parallel. In one production workload operating over tens of thousands of files, this change managed to reduce schema inference time from 7 minutes to 2 minutes.
A similar problem also affects the JSON file format and this patch originally fixed that as well, but I've decided to split that change into a separate patch so as not to conflict with changes in another JSON PR.
## How was this patch tested?
Existing unit tests, plus manual benchmarking on a production workload.
Author: Josh Rosen <joshrosen@databricks.com>
Closes#15813 from JoshRosen/use-text-data-source-in-csv-and-json.
## What changes were proposed in this pull request?
This patch bumps master branch version to 2.2.0-SNAPSHOT.
## How was this patch tested?
N/A
Author: Reynold Xin <rxin@databricks.com>
Closes#16126 from rxin/SPARK-18695.
## What changes were proposed in this pull request?
This PR adds a sql conf `spark.sql.streaming.noDataReportInterval` to control how long to wait before outputing the next StreamProgressEvent when there is no data.
## How was this patch tested?
The added unit test.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16108 from zsxwing/SPARK-18670.
## What changes were proposed in this pull request?
This fixes the parser rule to match named expressions, which doesn't work for two reasons:
1. The name match is not coerced to a regular expression (missing .r)
2. The surrounding literals are incorrect and attempt to escape a single quote, which is unnecessary
## How was this patch tested?
This adds test cases for named expressions using the bracket syntax, including one with quoted spaces.
Author: Ryan Blue <blue@apache.org>
Closes#16107 from rdblue/SPARK-18677-fix-json-path.
### What changes were proposed in this pull request?
Added a test case for using joins with nested fields.
### How was this patch tested?
N/A
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16110 from gatorsmile/followup-18674.
## What changes were proposed in this pull request?
Two bugs are addressed here
1. INSERT OVERWRITE TABLE sometime crashed when catalog partition management was enabled. This was because when dropping partitions after an overwrite operation, the Hive client will attempt to delete the partition files. If the entire partition directory was dropped, this would fail. The PR fixes this by adding a flag to control whether the Hive client should attempt to delete files.
2. The static partition spec for OVERWRITE TABLE was not correctly resolved to the case-sensitive original partition names. This resulted in the entire table being overwritten if you did not correctly capitalize your partition names.
cc yhuai cloud-fan
## How was this patch tested?
Unit tests. Surprisingly, the existing overwrite table tests did not catch these edge cases.
Author: Eric Liang <ekl@databricks.com>
Closes#16088 from ericl/spark-18659.
## What changes were proposed in this pull request?
Currently, `JDBCRelation.insert` removes Spark options too early by mistakenly using `asConnectionProperties`. Spark options like `numPartitions` should be passed into `DataFrameWriter.jdbc` correctly. This bug have been **hidden** because `JDBCOptions.asConnectionProperties` fails to filter out the mixed-case options. This PR aims to fix both.
**JDBCRelation.insert**
```scala
override def insert(data: DataFrame, overwrite: Boolean): Unit = {
val url = jdbcOptions.url
val table = jdbcOptions.table
- val properties = jdbcOptions.asConnectionProperties
+ val properties = jdbcOptions.asProperties
data.write
.mode(if (overwrite) SaveMode.Overwrite else SaveMode.Append)
.jdbc(url, table, properties)
```
**JDBCOptions.asConnectionProperties**
```scala
scala> import org.apache.spark.sql.execution.datasources.jdbc.JDBCOptions
scala> import org.apache.spark.sql.catalyst.util.CaseInsensitiveMap
scala> new JDBCOptions(Map("url" -> "jdbc:mysql://localhost:3306/temp", "dbtable" -> "t1", "numPartitions" -> "10")).asConnectionProperties
res0: java.util.Properties = {numpartitions=10}
scala> new JDBCOptions(new CaseInsensitiveMap(Map("url" -> "jdbc:mysql://localhost:3306/temp", "dbtable" -> "t1", "numPartitions" -> "10"))).asConnectionProperties
res1: java.util.Properties = {numpartitions=10}
```
## How was this patch tested?
Pass the Jenkins with a new testcase.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#15863 from dongjoon-hyun/SPARK-18419.
## What changes were proposed in this pull request?
In Spark 2.1 ListingFileCatalog was significantly refactored (and renamed to InMemoryFileIndex). This introduced a regression where parallelism could only be introduced at the very top of the tree. However, in many cases (e.g. `spark.read.parquet(topLevelDir)`), the top of the tree is only a single directory.
This PR simplifies and fixes the parallel recursive listing code to allow parallelism to be introduced at any level during recursive descent (though note that once we decide to list a sub-tree in parallel, the sub-tree is listed in serial on executors).
cc mallman cloud-fan
## How was this patch tested?
Checked metrics in unit tests.
Author: Eric Liang <ekl@databricks.com>
Closes#16112 from ericl/spark-18679.
## What changes were proposed in this pull request?
Fix numPartition of JDBCSuite Testcase.
## How was this patch tested?
Before:
Run any one of the test cases in JDBCSuite, you will get the following warning.
```
10:34:26.389 WARN org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation: The number of partitions is reduced because the specified number of partitions is less than the difference between upper bound and lower bound. Updated number of partitions: 3; Input number of partitions: 4; Lower bound: 1; Upper bound: 4.
```
After: Pass tests without the warning.
Author: Weiqing Yang <yangweiqing001@gmail.com>
Closes#16062 from weiqingy/SPARK-18629.
This PR targets to both master and branch-2.1.
## What changes were proposed in this pull request?
Due to PARQUET-686, Parquet doesn't do string comparison correctly while doing filter push-down for string columns. This PR disables filter push-down for both string and binary columns to work around this issue. Binary columns are also affected because some Parquet data models (like Hive) may store string columns as a plain Parquet `binary` instead of a `binary (UTF8)`.
## How was this patch tested?
New test case added in `ParquetFilterSuite`.
Author: Cheng Lian <lian@databricks.com>
Closes#16106 from liancheng/spark-17213-bad-string-ppd.
## What changes were proposed in this pull request?
This replaces uses of `TextOutputFormat` with an `OutputStream`, which will either write directly to the filesystem or indirectly via a compressor (if so configured). This avoids intermediate buffering.
The inverse of this (reading directly from a stream) is necessary for streaming large JSON records (when `wholeFile` is enabled) so I wanted to keep the read and write paths symmetric.
## How was this patch tested?
Existing unit tests.
Author: Nathan Howell <nhowell@godaddy.com>
Closes#16089 from NathanHowell/SPARK-18658.
## What changes were proposed in this pull request?
SPARK-18429 introduced count-min sketch aggregate function for SQL, but the implementation and testing is more complicated than needed. This simplifies the test cases and removes support for data types that don't have clear equality semantics:
1. Removed support for floating point and decimal types.
2. Removed the heavy randomized tests. The underlying CountMinSketch implementation already had pretty good test coverage through randomized tests, and the SPARK-18429 implementation is just to add an aggregate function wrapper around CountMinSketch. There is no need for randomized tests at three different levels of the implementations.
## How was this patch tested?
A lot of the change is to simplify test cases.
Author: Reynold Xin <rxin@databricks.com>
Closes#16093 from rxin/SPARK-18663.
## What changes were proposed in this pull request?
In Spark 2.1, we make Hive serde tables case-preserving by putting the table metadata in table properties, like what we did for data source table. However, we should not put table provider, as it will break forward compatibility. e.g. if we create a Hive serde table with Spark 2.1, using `sql("create table test stored as parquet as select 1")`, we will fail to read it with Spark 2.0, as Spark 2.0 mistakenly treat it as data source table because there is a `provider` entry in table properties.
Logically Hive serde table's provider is always hive, we don't need to store it in table properties, this PR removes it.
## How was this patch tested?
manually test the forward compatibility issue.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16080 from cloud-fan/hive.
## What changes were proposed in this pull request?
This PR makes `ExpressionEncoder.serializer.nullable` for flat encoder for a primitive type `false`. Since it is `true` for now, it is too conservative.
While `ExpressionEncoder.schema` has correct information (e.g. `<IntegerType, false>`), `serializer.head.nullable` of `ExpressionEncoder`, which got from `encoderFor[T]`, is always false. It is too conservative.
This is accomplished by checking whether a type is one of primitive types. If it is `true`, `nullable` should be `false`.
## How was this patch tested?
Added new tests for encoder and dataframe
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#15780 from kiszk/SPARK-18284.
## What changes were proposed in this pull request?
SQL query generated for the JDBC data source is not quoting columns in the predicate clause. When the source table has quoted column names, spark jdbc read fails with column not found error incorrectly.
Error:
org.h2.jdbc.JdbcSQLException: Column "ID" not found;
Source SQL statement:
SELECT "Name","Id" FROM TEST."mixedCaseCols" WHERE (Id < 1)
This PR fixes by quoting column names in the generated SQL for predicate clause when filters are pushed down to the data source.
Source SQL statement after the fix:
SELECT "Name","Id" FROM TEST."mixedCaseCols" WHERE ("Id" < 1)
## How was this patch tested?
Added new test case to the JdbcSuite
Author: sureshthalamati <suresh.thalamati@gmail.com>
Closes#15662 from sureshthalamati/filter_quoted_cols-SPARK-18141.
## What changes were proposed in this pull request?
The current error message of USING join is quite confusing, for example:
```
scala> val df1 = List(1,2,3).toDS.withColumnRenamed("value", "c1")
df1: org.apache.spark.sql.DataFrame = [c1: int]
scala> val df2 = List(1,2,3).toDS.withColumnRenamed("value", "c2")
df2: org.apache.spark.sql.DataFrame = [c2: int]
scala> df1.join(df2, usingColumn = "c1")
org.apache.spark.sql.AnalysisException: using columns ['c1] can not be resolved given input columns: [c1, c2] ;;
'Join UsingJoin(Inner,List('c1))
:- Project [value#1 AS c1#3]
: +- LocalRelation [value#1]
+- Project [value#7 AS c2#9]
+- LocalRelation [value#7]
```
after this PR, it becomes:
```
scala> val df1 = List(1,2,3).toDS.withColumnRenamed("value", "c1")
df1: org.apache.spark.sql.DataFrame = [c1: int]
scala> val df2 = List(1,2,3).toDS.withColumnRenamed("value", "c2")
df2: org.apache.spark.sql.DataFrame = [c2: int]
scala> df1.join(df2, usingColumn = "c1")
org.apache.spark.sql.AnalysisException: USING column `c1` can not be resolved with the right join side, the right output is: [c2];
```
## How was this patch tested?
updated tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16100 from cloud-fan/natural.
## What changes were proposed in this pull request?
Due to confusion between URI vs paths, in certain cases we escape partition values too many times, which causes some Hive client operations to fail or write data to the wrong location. This PR fixes at least some of these cases.
To my understanding this is how values, filesystem paths, and URIs interact.
- Hive stores raw (unescaped) partition values that are returned to you directly when you call listPartitions.
- Internally, we convert these raw values to filesystem paths via `ExternalCatalogUtils.[un]escapePathName`.
- In some circumstances we store URIs instead of filesystem paths. When a path is converted to a URI via `path.toURI`, the escaped partition values are further URI-encoded. This means that to get a path back from a URI, you must call `new Path(new URI(uriTxt))` in order to decode the URI-encoded string.
- In `CatalogStorageFormat` we store URIs as strings. This makes it easy to forget to URI-decode the value before converting it into a path.
- Finally, the Hive client itself uses mostly Paths for representing locations, and only URIs occasionally.
In the future we should probably clean this up, perhaps by dropping use of URIs when unnecessary. We should also try fixing escaping for partition names as well as values, though names are unlikely to contain special characters.
cc mallman cloud-fan yhuai
## How was this patch tested?
Unit tests.
Author: Eric Liang <ekl@databricks.com>
Closes#16071 from ericl/spark-18635.
### What changes were proposed in this pull request?
The following two `DataFrameReader` JDBC APIs ignore the user-specified parameters of parallelism degree.
```Scala
def jdbc(
url: String,
table: String,
columnName: String,
lowerBound: Long,
upperBound: Long,
numPartitions: Int,
connectionProperties: Properties): DataFrame
```
```Scala
def jdbc(
url: String,
table: String,
predicates: Array[String],
connectionProperties: Properties): DataFrame
```
This PR is to fix the issues. To verify the behavior correctness, we improve the plan output of `EXPLAIN` command by adding `numPartitions` in the `JDBCRelation` node.
Before the fix,
```
== Physical Plan ==
*Scan JDBCRelation(TEST.PEOPLE) [NAME#1896,THEID#1897] ReadSchema: struct<NAME:string,THEID:int>
```
After the fix,
```
== Physical Plan ==
*Scan JDBCRelation(TEST.PEOPLE) [numPartitions=3] [NAME#1896,THEID#1897] ReadSchema: struct<NAME:string,THEID:int>
```
### How was this patch tested?
Added the verification logics on all the test cases for JDBC concurrent fetching.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15975 from gatorsmile/jdbc.
## What changes were proposed in this pull request?
As `queryStatus` in StreamingQueryListener events was removed in #15954, parsing 2.0.2 structured streaming logs will throw the following errror:
```
[info] com.fasterxml.jackson.databind.exc.UnrecognizedPropertyException: Unrecognized field "queryStatus" (class org.apache.spark.sql.streaming.StreamingQueryListener$QueryTerminatedEvent), not marked as ignorable (2 known properties: "id", "exception"])
[info] at [Source: {"Event":"org.apache.spark.sql.streaming.StreamingQueryListener$QueryTerminatedEvent","queryStatus":{"name":"query-1","id":1,"timestamp":1480491532753,"inputRate":0.0,"processingRate":0.0,"latency":null,"sourceStatuses":[{"description":"FileStreamSource[file:/Users/zsx/stream]","offsetDesc":"#0","inputRate":0.0,"processingRate":0.0,"triggerDetails":{"latency.getOffset.source":"1","triggerId":"1"}}],"sinkStatus":{"description":"FileSink[/Users/zsx/stream2]","offsetDesc":"[#0]"},"triggerDetails":{}},"exception":null}; line: 1, column: 521] (through reference chain: org.apache.spark.sql.streaming.QueryTerminatedEvent["queryStatus"])
[info] at com.fasterxml.jackson.databind.exc.UnrecognizedPropertyException.from(UnrecognizedPropertyException.java:51)
[info] at com.fasterxml.jackson.databind.DeserializationContext.reportUnknownProperty(DeserializationContext.java:839)
[info] at com.fasterxml.jackson.databind.deser.std.StdDeserializer.handleUnknownProperty(StdDeserializer.java:1045)
[info] at com.fasterxml.jackson.databind.deser.BeanDeserializerBase.handleUnknownProperty(BeanDeserializerBase.java:1352)
[info] at com.fasterxml.jackson.databind.deser.BeanDeserializerBase.handleUnknownProperties(BeanDeserializerBase.java:1306)
[info] at com.fasterxml.jackson.databind.deser.BeanDeserializer._deserializeUsingPropertyBased(BeanDeserializer.java:453)
[info] at com.fasterxml.jackson.databind.deser.BeanDeserializerBase.deserializeFromObjectUsingNonDefault(BeanDeserializerBase.java:1099)
...
```
This PR just ignores such errors and adds a test to make sure we can read 2.0.2 logs.
## How was this patch tested?
`query-event-logs-version-2.0.2.txt` has all types of events generated by Structured Streaming in Spark 2.0.2. `testQuietly("ReplayListenerBus should ignore broken event jsons generated in 2.0.2")` verified we can load them without any error.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#16085 from zsxwing/SPARK-18655.
## What changes were proposed in this pull request?
For input object of non-flat type, we can't encode it to row if it's null, as Spark SQL doesn't allow the entire row to be null, only its columns can be null. That's the reason we forbid users to use top level null objects in https://github.com/apache/spark/pull/13469
However, if users wrap non-flat type with `Option`, then we may still encoder top level null object to row, which is not allowed.
This PR fixes this case, and suggests users to wrap their type with `Tuple1` if they do wanna top level null objects.
## How was this patch tested?
new test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15979 from cloud-fan/option.
## What changes were proposed in this pull request?
Spark SQL only has `StringType`, when reading hive table with varchar column, we will read that column as `StringType`. However, we still need to use varchar `ObjectInspector` to read varchar column in hive table, which means we need to know the actual column type at hive side.
In Spark 2.1, after https://github.com/apache/spark/pull/14363 , we parse hive type string to catalyst type, which means the actual column type at hive side is erased. Then we may use string `ObjectInspector` to read varchar column and fail.
This PR keeps the original hive column type string in the metadata of `StructField`, and use it when we convert it to a hive column.
## How was this patch tested?
newly added regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16060 from cloud-fan/varchar.
## What changes were proposed in this pull request?
Currently we haven't implemented `SHOW TABLE EXTENDED` in Spark 2.0. This PR is to implement the statement.
Goals:
1. Support `SHOW TABLES EXTENDED LIKE 'identifier_with_wildcards'`;
2. Explicitly output an unsupported error message for `SHOW TABLES [EXTENDED] ... PARTITION` statement;
3. Improve test cases for `SHOW TABLES` statement.
## How was this patch tested?
1. Add new test cases in file `show-tables.sql`.
2. Modify tests for `SHOW TABLES` in `DDLSuite`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#15958 from jiangxb1987/show-table-extended.
### What changes were proposed in this pull request?
The `constraints` of an operator is the expressions that evaluate to `true` for all the rows produced. That means, the expression result should be neither `false` nor `unknown` (NULL). Thus, we can conclude that `IsNotNull` on all the constraints, which are generated by its own predicates or propagated from the children. The constraint can be a complex expression. For better usage of these constraints, we try to push down `IsNotNull` to the lowest-level expressions (i.e., `Attribute`). `IsNotNull` can be pushed through an expression when it is null intolerant. (When the input is NULL, the null-intolerant expression always evaluates to NULL.)
Below is the existing code we have for `IsNotNull` pushdown.
```Scala
private def scanNullIntolerantExpr(expr: Expression): Seq[Attribute] = expr match {
case a: Attribute => Seq(a)
case _: NullIntolerant | IsNotNull(_: NullIntolerant) =>
expr.children.flatMap(scanNullIntolerantExpr)
case _ => Seq.empty[Attribute]
}
```
**`IsNotNull` itself is not null-intolerant.** It converts `null` to `false`. If the expression does not include any `Not`-like expression, it works; otherwise, it could generate a wrong result. This PR is to fix the above function by removing the `IsNotNull` from the inference. After the fix, when a constraint has a `IsNotNull` expression, we infer new attribute-specific `IsNotNull` constraints if and only if `IsNotNull` appears in the root.
Without the fix, the following test case will return empty.
```Scala
val data = Seq[java.lang.Integer](1, null).toDF("key")
data.filter("not key is not null").show()
```
Before the fix, the optimized plan is like
```
== Optimized Logical Plan ==
Project [value#1 AS key#3]
+- Filter (isnotnull(value#1) && NOT isnotnull(value#1))
+- LocalRelation [value#1]
```
After the fix, the optimized plan is like
```
== Optimized Logical Plan ==
Project [value#1 AS key#3]
+- Filter NOT isnotnull(value#1)
+- LocalRelation [value#1]
```
### How was this patch tested?
Added a test
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16067 from gatorsmile/isNotNull2.
## What changes were proposed in this pull request?
The result of a `sum` aggregate function is typically a Decimal, Double or a Long. Currently the output dataType is based on input's dataType.
The `FunctionArgumentConversion` rule will make sure that the input is promoted to the largest type, and that also ensures that the output uses a (hopefully) sufficiently large output dataType. The issue is that sum is in a resolved state when we cast the input type, this means that rules assuming that the dataType of the expression does not change anymore could have been applied in the mean time. This is what happens if we apply `WidenSetOperationTypes` before applying the casts, and this breaks analysis.
The most straight forward and future proof solution is to make `sum` always output the widest dataType in its class (Long for IntegralTypes, Decimal for DecimalTypes & Double for FloatType and DoubleType). This PR implements that solution.
We should move expression specific type casting rules into the given Expression at some point.
## How was this patch tested?
Added (regression) tests to SQLQueryTestSuite's `union.sql`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16063 from hvanhovell/SPARK-18622.
### What changes were proposed in this pull request?
Spark SQL supports Unicode characters for column names when specified within backticks(`). When the Hive support is enabled, the version of the Hive metastore must be higher than 0.12, See the JIRA: https://issues.apache.org/jira/browse/HIVE-6013 Hive metastore supports Unicode characters for column names since 0.13.
In Spark SQL, table comments, and view comments always allow Unicode characters without backticks.
BTW, a separate PR has been submitted for database and table name validation because we do not support Unicode characters in these two cases.
### How was this patch tested?
N/A
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15255 from gatorsmile/unicodeSupport.
## What changes were proposed in this pull request?
- Add StreamingQueryStatus.json
- Make it not case class (to avoid unnecessarily exposing implicit object StreamingQueryStatus, consistent with StreamingQueryProgress)
- Add StreamingQuery.status to Python
- Fix post-termination status
## How was this patch tested?
New unit tests
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#16075 from tdas/SPARK-18516-1.
## What changes were proposed in this pull request?
`AggregateFunction` currently implements `ImplicitCastInputTypes` (which enables implicit input type casting). There are actually quite a few situations in which we don't need this, or require more control over our input. A recent example is the aggregate for `CountMinSketch` which should only take string, binary or integral types inputs.
This PR removes `ImplicitCastInputTypes` from the `AggregateFunction` and makes a case-by-case decision on what kind of input validation we should use.
## How was this patch tested?
Refactoring only. Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16066 from hvanhovell/SPARK-18632.
This PR separates the status of a `StreamingQuery` into two separate APIs:
- `status` - describes the status of a `StreamingQuery` at this moment, including what phase of processing is currently happening and if data is available.
- `recentProgress` - an array of statistics about the most recent microbatches that have executed.
A recent progress contains the following information:
```
{
"id" : "2be8670a-fce1-4859-a530-748f29553bb6",
"name" : "query-29",
"timestamp" : 1479705392724,
"inputRowsPerSecond" : 230.76923076923077,
"processedRowsPerSecond" : 10.869565217391303,
"durationMs" : {
"triggerExecution" : 276,
"queryPlanning" : 3,
"getBatch" : 5,
"getOffset" : 3,
"addBatch" : 234,
"walCommit" : 30
},
"currentWatermark" : 0,
"stateOperators" : [ ],
"sources" : [ {
"description" : "KafkaSource[Subscribe[topic-14]]",
"startOffset" : {
"topic-14" : {
"2" : 0,
"4" : 1,
"1" : 0,
"3" : 0,
"0" : 0
}
},
"endOffset" : {
"topic-14" : {
"2" : 1,
"4" : 2,
"1" : 0,
"3" : 0,
"0" : 1
}
},
"numRecords" : 3,
"inputRowsPerSecond" : 230.76923076923077,
"processedRowsPerSecond" : 10.869565217391303
} ]
}
```
Additionally, in order to make it possible to correlate progress updates across restarts, we change the `id` field from an integer that is unique with in the JVM to a `UUID` that is globally unique.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Author: Michael Armbrust <michael@databricks.com>
Closes#15954 from marmbrus/queryProgress.
## What changes were proposed in this pull request?
ExistenceJoin should be treated the same as LeftOuter and LeftAnti, not InnerLike and LeftSemi. This is not currently exposed because the rewrite of [NOT] EXISTS OR ... to ExistenceJoin happens in rule RewritePredicateSubquery, which is in a separate rule set and placed after the rule PushPredicateThroughJoin. During the transformation in the rule PushPredicateThroughJoin, an ExistenceJoin never exists.
The semantics of ExistenceJoin says we need to preserve all the rows from the left table through the join operation as if it is a regular LeftOuter join. The ExistenceJoin augments the LeftOuter operation with a new column called exists, set to true when the join condition in the ON clause is true and false otherwise. The filter of any rows will happen in the Filter operation above the ExistenceJoin.
Example:
A(c1, c2): { (1, 1), (1, 2) }
// B can be any value as it is irrelevant in this example
B(c1): { (NULL) }
select A.*
from A
where exists (select 1 from B where A.c1 = A.c2)
or A.c2=2
In this example, the correct result is all the rows from A. If the pattern ExistenceJoin around line 935 in Optimizer.scala is indeed active, the code will push down the predicate A.c1 = A.c2 to be a Filter on relation A, which will incorrectly filter the row (1,2) from A.
## How was this patch tested?
Since this is not an exposed case, no new test cases is added. The scenario is discovered via a code review of another PR and confirmed to be valid with peer.
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#16044 from nsyca/spark-18614.
## What changes were proposed in this pull request?
Re-partitioning logic in ExchangeCoordinator changed so that adding another pre-shuffle partition to the post-shuffle partition will not be done if doing so would cause the size of the post-shuffle partition to exceed the target partition size.
## How was this patch tested?
Existing tests updated to reflect new expectations.
Author: Mark Hamstra <markhamstra@gmail.com>
Closes#16065 from markhamstra/SPARK-17064.
## What changes were proposed in this pull request?
This PR implements a new Aggregate to generate count min sketch, which is a wrapper of CountMinSketch.
## How was this patch tested?
add test cases
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#15877 from wzhfy/cms.
Revise HDFSMetadataLog API such that metadata object serialization and final batch file write are separated. This will allow serialization checks without worrying about batch file name formats. marmbrus zsxwing
Existing tests already ensure this API faithfully support core functionality i.e., creation of batch files.
Author: Tyson Condie <tcondie@gmail.com>
Closes#15924 from tcondie/SPARK-18498.
Signed-off-by: Michael Armbrust <michael@databricks.com>
## What changes were proposed in this pull request?
This PR make `sbt unidoc` complete with Java 8.
This PR roughly includes several fixes as below:
- Fix unrecognisable class and method links in javadoc by changing it from `[[..]]` to `` `...` ``
```diff
- * A column that will be computed based on the data in a [[DataFrame]].
+ * A column that will be computed based on the data in a `DataFrame`.
```
- Fix throws annotations so that they are recognisable in javadoc
- Fix URL links to `<a href="http..."></a>`.
```diff
- * [[http://en.wikipedia.org/wiki/Decision_tree_learning Decision tree]] model for regression.
+ * <a href="http://en.wikipedia.org/wiki/Decision_tree_learning">
+ * Decision tree (Wikipedia)</a> model for regression.
```
```diff
- * see http://en.wikipedia.org/wiki/Receiver_operating_characteristic
+ * see <a href="http://en.wikipedia.org/wiki/Receiver_operating_characteristic">
+ * Receiver operating characteristic (Wikipedia)</a>
```
- Fix < to > to
- `greater than`/`greater than or equal to` or `less than`/`less than or equal to` where applicable.
- Wrap it with `{{{...}}}` to print them in javadoc or use `{code ...}` or `{literal ..}`. Please refer https://github.com/apache/spark/pull/16013#discussion_r89665558
- Fix `</p>` complaint
## How was this patch tested?
Manually tested by `jekyll build` with Java 7 and 8
```
java version "1.7.0_80"
Java(TM) SE Runtime Environment (build 1.7.0_80-b15)
Java HotSpot(TM) 64-Bit Server VM (build 24.80-b11, mixed mode)
```
```
java version "1.8.0_45"
Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#16013 from HyukjinKwon/SPARK-3359-errors-more.
## What changes were proposed in this pull request?
For the following workflow:
1. I have a column called time which is at minute level precision in a Streaming DataFrame
2. I want to perform groupBy time, count
3. Then I want my MemorySink to only have the last 30 minutes of counts and I perform this by
.where('time >= current_timestamp().cast("long") - 30 * 60)
what happens is that the `filter` gets pushed down before the aggregation, and the filter happens on the source data for the aggregation instead of the result of the aggregation (where I actually want to filter).
I guess the main issue here is that `current_timestamp` is non-deterministic in the streaming context and shouldn't be pushed down the filter.
Does this require us to store the `current_timestamp` for each trigger of the streaming job, that is something to discuss.
Furthermore, we want to persist current batch timestamp and watermark timestamp to the offset log so that these values are consistent across multiple executions of the same batch.
brkyvz zsxwing tdas
## How was this patch tested?
A test was added to StreamingAggregationSuite ensuring the above use case is handled. The test injects a stream of time values (in seconds) to a query that runs in complete mode and only outputs the (count) aggregation results for the past 10 seconds.
Author: Tyson Condie <tcondie@gmail.com>
Closes#15949 from tcondie/SPARK-18339.
## What changes were proposed in this pull request?
We failed to properly propagate table metadata for existing tables for the saveAsTable command. This caused a downstream component to think the table was MANAGED, writing data to the wrong location.
## How was this patch tested?
Unit test that fails before the patch.
Author: Eric Liang <ekl@databricks.com>
Closes#15983 from ericl/spark-18544.
## What changes were proposed in this pull request?
This is absolutely minor. PR https://github.com/apache/spark/pull/15595 uses `dt1.asNullable == dt2.asNullable` expressions in a few places. It is however more efficient to call `dt1.sameType(dt2)`. I have replaced every instance of the first pattern with the second pattern (3/5 were introduced by #15595).
## How was this patch tested?
Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16041 from hvanhovell/SPARK-18058.
## What changes were proposed in this pull request?
In #15764 we added a mechanism to detect if a function is temporary or not. Hive functions are treated as non-temporary. Of the three hive functions, now "percentile" has been implemented natively, and "hash" has been removed. So we should update the list.
## How was this patch tested?
Unit tests.
Author: Shuai Lin <linshuai2012@gmail.com>
Closes#16049 from lins05/update-temp-function-detect-hive-list.
## What changes were proposed in this pull request?
This PR fixes a random OOM issue occurred while running `ObjectHashAggregateSuite`.
This issue can be steadily reproduced under the following conditions:
1. The aggregation must be evaluated using `ObjectHashAggregateExec`;
2. There must be an input column whose data type involves `ArrayType` (an input column of `MapType` may even cause SIGSEGV);
3. Sort-based aggregation fallback must be triggered during evaluation.
The root cause is that while falling back to sort-based aggregation, we must sort and feed already evaluated partial aggregation buffers living in the hash map to the sort-based aggregator using an external sorter. However, the underlying mutable byte buffer of `UnsafeRow`s produced by the iterator of the external sorter is reused and may get overwritten when the iterator steps forward. After the last entry is consumed, the byte buffer points to a block of uninitialized memory filled by `5a`. Therefore, while reading an `UnsafeArrayData` out of the `UnsafeRow`, `5a5a5a5a` is treated as array size and triggers a memory allocation for a ridiculously large array and immediately blows up the JVM with an OOM.
To fix this issue, we only need to add `.copy()` accordingly.
## How was this patch tested?
New regression test case added in `ObjectHashAggregateSuite`.
Author: Cheng Lian <lian@databricks.com>
Closes#15976 from liancheng/investigate-oom.
## What changes were proposed in this pull request?
This pull request adds test cases for the following cases:
- keep all data types with null or without null
- access `CachedBatch` disabling whole stage codegen
- access only some columns in `CachedBatch`
This PR is a part of https://github.com/apache/spark/pull/15219. Here are motivations to add these tests. When https://github.com/apache/spark/pull/15219 is enabled, the first two cases are handled by specialized (generated) code. The third one is a pitfall.
In general, even for now, it would be helpful to increase test coverage.
## How was this patch tested?
added test suites itself
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#15462 from kiszk/columnartestsuites.
## What changes were proposed in this pull request?
Implement percentile SQL function. It computes the exact percentile(s) of expr at pc with range in [0, 1].
## How was this patch tested?
Add a new testsuite `PercentileSuite` to test percentile directly.
Updated related testcases in `ExpressionToSQLSuite`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Author: 蒋星博 <jiangxingbo@meituan.com>
Author: jiangxingbo <jiangxingbo@meituan.com>
Closes#14136 from jiangxb1987/percentile.
## What changes were proposed in this pull request?
`CatalogTable` has a parameter named `tracksPartitionsInCatalog`, and in `CatalogTable.toString` we use `"Partition Provider: Catalog"` to represent it. This PR fixes `DESC TABLE` to make it consistent with `CatalogTable.toString`.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16035 from cloud-fan/minor.
## What changes were proposed in this pull request?
org.codehaus.janino:janino depends on org.codehaus.janino:commons-compiler and we have been upgraded to org.codehaus.janino:janino 3.0.0.
However, seems we are still pulling in org.codehaus.janino:commons-compiler 2.7.6 because of calcite. It looks like an accident because we exclude janino from calcite (see here https://github.com/apache/spark/blob/branch-2.1/pom.xml#L1759). So, this PR upgrades org.codehaus.janino:commons-compiler to 3.0.0.
## How was this patch tested?
jenkins
Author: Yin Huai <yhuai@databricks.com>
Closes#16025 from yhuai/janino-commons-compile.
## What changes were proposed in this pull request?
https://github.com/apache/spark/pull/15704 will fail if we use int literal in `DROP PARTITION`, and we have reverted it in branch-2.1.
This PR reverts it in master branch, and add a regression test for it, to make sure the master branch is healthy.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16036 from cloud-fan/revert.
## What changes were proposed in this pull request?
We currently push down join conditions of a Left Anti join to both sides of the join. This is similar to Inner, Left Semi and Existence (a specialized left semi) join. The problem is that this changes the semantics of the join; a left anti join filters out rows that matches the join condition.
This PR fixes this by only pushing down conditions to the left hand side of the join. This is similar to the behavior of left outer join.
## How was this patch tested?
Added tests to `FilterPushdownSuite.scala` and created a SQLQueryTestSuite file for left anti joins with a regression test.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16026 from hvanhovell/SPARK-18597.
## What changes were proposed in this pull request?
The `CollapseWindow` optimizer rule changes the order of output attributes. This modifies the output of the plan, which the optimizer cannot do. This also breaks things like `collect()` for which we use a `RowEncoder` that assumes that the output attributes of the executed plan are equal to those outputted by the logical plan.
## How was this patch tested?
I have updated an incorrect test in `CollapseWindowSuite`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#16027 from hvanhovell/SPARK-18604.
## What changes were proposed in this pull request?
Janino can optimize `true ? a : b` into `a` or `false ? a : b` into `b`, or if/else with literal condition, so we should use literal as `ev.isNull` if possible.
## How was this patch tested?
Existing tests.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#16008 from ueshin/issues/SPARK-18585.
## What changes were proposed in this pull request?
In Spark 2.1, we did a lot of refactor for `HiveExternalCatalog` and related code path. These refactor may introduce external behavior changes and break backward compatibility. e.g. http://issues.apache.org/jira/browse/SPARK-18464
To avoid future compatibility problems of `HiveExternalCatalog`, this PR dumps some typical table metadata from tables created by 2.0, and test if they can recognized by current version of Spark.
## How was this patch tested?
test only change
Author: Wenchen Fan <wenchen@databricks.com>
Closes#16003 from cloud-fan/test.
### What changes were proposed in this pull request?
Currently, the name validation checks are limited to table creation. It is enfored by Analyzer rule: `PreWriteCheck`.
However, table renaming and database creation have the same issues. It makes more sense to do the checks in `SessionCatalog`. This PR is to add it into `SessionCatalog`.
### How was this patch tested?
Added test cases
Author: gatorsmile <gatorsmile@gmail.com>
Closes#16018 from gatorsmile/nameValidate.
## What changes were proposed in this pull request?
Currently, `OuterReference` is not `NamedExpression`. So, it raises 'ClassCastException` when it used in projection lists of IN correlated subqueries. This PR aims to support that by making `OuterReference` as `NamedExpression` to show correct error messages.
```scala
scala> sql("CREATE TEMPORARY VIEW t1 AS SELECT * FROM VALUES 1, 2 AS t1(a)")
scala> sql("CREATE TEMPORARY VIEW t2 AS SELECT * FROM VALUES 1 AS t2(b)")
scala> sql("SELECT a FROM t1 WHERE a IN (SELECT a FROM t2)").show
java.lang.ClassCastException: org.apache.spark.sql.catalyst.expressions.OuterReference cannot be cast to org.apache.spark.sql.catalyst.expressions.NamedExpression
```
## How was this patch tested?
Pass the Jenkins test with new test cases.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#16015 from dongjoon-hyun/SPARK-17251-2.
## What changes were proposed in this pull request?
This PR is to fix incorrect `code` tag in `sql-programming-guide.md`
## How was this patch tested?
Manually.
Author: Weiqing Yang <yangweiqing001@gmail.com>
Closes#15941 from weiqingy/fixtag.
## What changes were proposed in this pull request?
The nullability of `InputFileName` should be `false`.
## How was this patch tested?
Existing tests.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#16007 from ueshin/issues/SPARK-18583.
## What changes were proposed in this pull request?
The expression `in(empty seq)` is invalid in some data source. Since `in(empty seq)` is always false, we should generate `in(empty seq)` to false literal in optimizer.
The sql `SELECT * FROM t WHERE a IN ()` throws a `ParseException` which is consistent with Hive, don't need to change that behavior.
## How was this patch tested?
Add new test case in `OptimizeInSuite`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#15977 from jiangxb1987/isin-empty.
## What changes were proposed in this pull request?
This is a follow-up PR of #15868 to merge `maxConnections` option into `numPartitions` options.
## How was this patch tested?
Pass the existing tests.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#15966 from dongjoon-hyun/SPARK-18413-2.
## What changes were proposed in this pull request?
In `HyperLogLogPlusPlus`, if the relative error is so small that p >= 19, it will cause ArrayIndexOutOfBoundsException in `THRESHOLDS(p-4)` . We should check `p` and when p >= 19, regress to the original HLL result and use the small range correction they use.
The pr also fixes the upper bound in the log info in `require()`.
The upper bound is computed by:
```
val relativeSD = 1.106d / Math.pow(Math.E, p * Math.log(2.0d) / 2.0d)
```
which is derived from the equation for computing `p`:
```
val p = 2.0d * Math.log(1.106d / relativeSD) / Math.log(2.0d)
```
## How was this patch tested?
add test cases for:
1. checking validity of parameter relatvieSD
2. estimation with smaller relative error so that p >= 19
Author: Zhenhua Wang <wzh_zju@163.com>
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#15990 from wzhfy/hllppRsd.
## What changes were proposed in this pull request?
This PR only tries to fix things that looks pretty straightforward and were fixed in other previous PRs before.
This PR roughly fixes several things as below:
- Fix unrecognisable class and method links in javadoc by changing it from `[[..]]` to `` `...` ``
```
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/DataStreamReader.java:226: error: reference not found
[error] * Loads text files and returns a {link DataFrame} whose schema starts with a string column named
```
- Fix an exception annotation and remove code backticks in `throws` annotation
Currently, sbt unidoc with Java 8 complains as below:
```
[error] .../java/org/apache/spark/sql/streaming/StreamingQuery.java:72: error: unexpected text
[error] * throws StreamingQueryException, if <code>this</code> query has terminated with an exception.
```
`throws` should specify the correct class name from `StreamingQueryException,` to `StreamingQueryException` without backticks. (see [JDK-8007644](https://bugs.openjdk.java.net/browse/JDK-8007644)).
- Fix `[[http..]]` to `<a href="http..."></a>`.
```diff
- * [[https://blogs.oracle.com/java-platform-group/entry/diagnosing_tls_ssl_and_https Oracle
- * blog page]].
+ * <a href="https://blogs.oracle.com/java-platform-group/entry/diagnosing_tls_ssl_and_https">
+ * Oracle blog page</a>.
```
`[[http...]]` link markdown in scaladoc is unrecognisable in javadoc.
- It seems class can't have `return` annotation. So, two cases of this were removed.
```
[error] .../java/org/apache/spark/mllib/regression/IsotonicRegression.java:27: error: invalid use of return
[error] * return New instance of IsotonicRegression.
```
- Fix < to `<` and > to `>` according to HTML rules.
- Fix `</p>` complaint
- Exclude unrecognisable in javadoc, `constructor`, `todo` and `groupname`.
## How was this patch tested?
Manually tested by `jekyll build` with Java 7 and 8
```
java version "1.7.0_80"
Java(TM) SE Runtime Environment (build 1.7.0_80-b15)
Java HotSpot(TM) 64-Bit Server VM (build 24.80-b11, mixed mode)
```
```
java version "1.8.0_45"
Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
```
Note: this does not yet make sbt unidoc suceed with Java 8 yet but it reduces the number of errors with Java 8.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15999 from HyukjinKwon/SPARK-3359-errors.
## What changes were proposed in this pull request?
- Raise Analysis exception when correlated predicates exist in the descendant operators of either operand of a Full outer join in a subquery as well as in a FOJ operator itself
- Raise Analysis exception when correlated predicates exists in a Window operator (a side effect inadvertently introduced by SPARK-17348)
## How was this patch tested?
Run sql/test catalyst/test and new test cases, added to SubquerySuite, showing the reported incorrect results.
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#16005 from nsyca/FOJ-incorrect.1.
## What changes were proposed in this pull request?
This PR addressed the rest comments in #15951.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#15997 from zsxwing/SPARK-18510-follow-up.
## What changes were proposed in this pull request?
### The Issue
If I specify my schema when doing
```scala
spark.read
.schema(someSchemaWherePartitionColumnsAreStrings)
```
but if the partition inference can infer it as IntegerType or I assume LongType or DoubleType (basically fixed size types), then once UnsafeRows are generated, your data will be corrupted.
### Proposed solution
The partition handling code path is kind of a mess. In my fix I'm probably adding to the mess, but at least trying to standardize the code path.
The real issue is that a user that uses the `spark.read` code path can never clearly specify what the partition columns are. If you try to specify the fields in `schema`, we practically ignore what the user provides, and fall back to our inferred data types. What happens in the end is data corruption.
My solution tries to fix this by always trying to infer partition columns the first time you specify the table. Once we find what the partition columns are, we try to find them in the user specified schema and use the dataType provided there, or fall back to the smallest common data type.
We will ALWAYS append partition columns to the user's schema, even if they didn't ask for it. We will only use the data type they provided if they specified it. While this is confusing, this has been the behavior since Spark 1.6, and I didn't want to change this behavior in the QA period of Spark 2.1. We may revisit this decision later.
A side effect of this PR is that we won't need https://github.com/apache/spark/pull/15942 if this PR goes in.
## How was this patch tested?
Regression tests
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#15951 from brkyvz/partition-corruption.
## What changes were proposed in this pull request?
When we try to create the default database, we ask hive to do nothing if it already exists. However, Hive will log an error message instead of doing nothing, and the error message is quite annoying and confusing.
In this PR, we only create default database if it doesn't exist.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15993 from cloud-fan/default-db.
## What changes were proposed in this pull request?
The current implementation of column stats uses the base64 encoding of the internal UnsafeRow format to persist statistics (in table properties in Hive metastore). This is an internal format that is not stable across different versions of Spark and should NOT be used for persistence. In addition, it would be better if statistics stored in the catalog is human readable.
This pull request introduces the following changes:
1. Created a single ColumnStat class to for all data types. All data types track the same set of statistics.
2. Updated the implementation for stats collection to get rid of the dependency on internal data structures (e.g. InternalRow, or storing DateType as an int32). For example, previously dates were stored as a single integer, but are now stored as java.sql.Date. When we implement the next steps of CBO, we can add code to convert those back into internal types again.
3. Documented clearly what JVM data types are being used to store what data.
4. Defined a simple Map[String, String] interface for serializing and deserializing column stats into/from the catalog.
5. Rearranged the method/function structure so it is more clear what the supported data types are, and also moved how stats are generated into ColumnStat class so they are easy to find.
## How was this patch tested?
Removed most of the original test cases created for column statistics, and added three very simple ones to cover all the cases. The three test cases validate:
1. Roundtrip serialization works.
2. Behavior when analyzing non-existent column or unsupported data type column.
3. Result for stats collection for all valid data types.
Also moved parser related tests into a parser test suite and added an explicit serialization test for the Hive external catalog.
Author: Reynold Xin <rxin@databricks.com>
Closes#15959 from rxin/SPARK-18522.
## What changes were proposed in this pull request?
In Spark SQL, some expression may output safe format values, e.g. `CreateArray`, `CreateStruct`, `Cast`, etc. When we compare 2 values, we should be able to compare safe and unsafe formats.
The `GreaterThan`, `LessThan`, etc. in Spark SQL already handles it, but the `EqualTo` doesn't. This PR fixes it.
## How was this patch tested?
new unit test and regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15929 from cloud-fan/type-aware.
## What changes were proposed in this pull request?
Updates links to the wiki to links to the new location of content on spark.apache.org.
## How was this patch tested?
Doc builds
Author: Sean Owen <sowen@cloudera.com>
Closes#15967 from srowen/SPARK-18073.1.
## What changes were proposed in this pull request?
This PR proposes throwing an `AnalysisException` with a proper message rather than `NoSuchElementException` with the message ` key not found: TimestampType` when unsupported types are given to `reflect` and `java_method` functions.
```scala
spark.range(1).selectExpr("reflect('java.lang.String', 'valueOf', cast('1990-01-01' as timestamp))")
```
produces
**Before**
```
java.util.NoSuchElementException: key not found: TimestampType
at scala.collection.MapLike$class.default(MapLike.scala:228)
at scala.collection.AbstractMap.default(Map.scala:59)
at scala.collection.MapLike$class.apply(MapLike.scala:141)
at scala.collection.AbstractMap.apply(Map.scala:59)
at org.apache.spark.sql.catalyst.expressions.CallMethodViaReflection$$anonfun$findMethod$1$$anonfun$apply$1.apply(CallMethodViaReflection.scala:159)
...
```
**After**
```
cannot resolve 'reflect('java.lang.String', 'valueOf', CAST('1990-01-01' AS TIMESTAMP))' due to data type mismatch: arguments from the third require boolean, byte, short, integer, long, float, double or string expressions; line 1 pos 0;
'Project [unresolvedalias(reflect(java.lang.String, valueOf, cast(1990-01-01 as timestamp)), Some(<function1>))]
+- Range (0, 1, step=1, splits=Some(2))
...
```
Added message is,
```
arguments from the third require boolean, byte, short, integer, long, float, double or string expressions
```
## How was this patch tested?
Tests added in `CallMethodViaReflection`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15694 from HyukjinKwon/SPARK-18179.
## What changes were proposed in this pull request?
Fixes the inconsistency of error raised between data source and hive serde
tables when schema is specified in CTAS scenario. In the process the grammar for
create table (datasource) is simplified.
**before:**
``` SQL
spark-sql> create table t2 (c1 int, c2 int) using parquet as select * from t1;
Error in query:
mismatched input 'as' expecting {<EOF>, '.', 'OPTIONS', 'CLUSTERED', 'PARTITIONED'}(line 1, pos 64)
== SQL ==
create table t2 (c1 int, c2 int) using parquet as select * from t1
----------------------------------------------------------------^^^
```
**After:**
```SQL
spark-sql> create table t2 (c1 int, c2 int) using parquet as select * from t1
> ;
Error in query:
Operation not allowed: Schema may not be specified in a Create Table As Select (CTAS) statement(line 1, pos 0)
== SQL ==
create table t2 (c1 int, c2 int) using parquet as select * from t1
^^^
```
## How was this patch tested?
Added a new test in CreateTableAsSelectSuite
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#15968 from dilipbiswal/ctas.
### What changes were proposed in this pull request?
In Spark 2.0, `SaveAsTable` does not work when the target table is a Hive serde table, but Spark 1.6 works.
**Spark 1.6**
``` Scala
scala> sql("create table sample.sample stored as SEQUENCEFILE as select 1 as key, 'abc' as value")
res2: org.apache.spark.sql.DataFrame = []
scala> val df = sql("select key, value as value from sample.sample")
df: org.apache.spark.sql.DataFrame = [key: int, value: string]
scala> df.write.mode("append").saveAsTable("sample.sample")
scala> sql("select * from sample.sample").show()
+---+-----+
|key|value|
+---+-----+
| 1| abc|
| 1| abc|
+---+-----+
```
**Spark 2.0**
``` Scala
scala> df.write.mode("append").saveAsTable("sample.sample")
org.apache.spark.sql.AnalysisException: Saving data in MetastoreRelation sample, sample
is not supported.;
```
So far, we do not plan to support it in Spark 2.1 due to the risk. Spark 1.6 works because it internally uses insertInto. But, if we change it back it will break the semantic of saveAsTable (this method uses by-name resolution instead of using by-position resolution used by insertInto). More extra changes are needed to support `hive` as a `format` in DataFrameWriter.
Instead, users should use insertInto API. This PR corrects the error messages. Users can understand how to bypass it before we support it in a separate PR.
### How was this patch tested?
Test cases are added
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15926 from gatorsmile/saveAsTableFix5.
## What changes were proposed in this pull request?
While this behavior is debatable, consider the following use case:
```sql
UNCACHE TABLE foo;
CACHE TABLE foo AS
SELECT * FROM bar
```
The command above fails the first time you run it. But I want to run the command above over and over again, and I don't want to change my code just for the first run of it.
The issue is that subsequent `CACHE TABLE` commands do not overwrite the existing table.
Now we can do:
```sql
UNCACHE TABLE IF EXISTS foo;
CACHE TABLE foo AS
SELECT * FROM bar
```
## How was this patch tested?
Unit tests
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#15896 from brkyvz/uncache.
## What changes were proposed in this pull request?
HiveExternalCatalog.listPartitions should only call `getTable` once, instead of calling it for every partitions.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15978 from cloud-fan/perf.
## What changes were proposed in this pull request?
This PR blocks an incorrect result scenario in scalar subquery where there are GROUP BY column(s)
that are not part of the correlated predicate(s).
Example:
// Incorrect result
Seq(1).toDF("c1").createOrReplaceTempView("t1")
Seq((1,1),(1,2)).toDF("c1","c2").createOrReplaceTempView("t2")
sql("select (select sum(-1) from t2 where t1.c1=t2.c1 group by t2.c2) from t1").show
// How can selecting a scalar subquery from a 1-row table return 2 rows?
## How was this patch tested?
sql/test, catalyst/test
new test case covering the reported problem is added to SubquerySuite.scala
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#15936 from nsyca/scalarSubqueryIncorrect-1.
## What changes were proposed in this pull request?
Technically map type is not orderable, but can be used in equality comparison. However, due to the limitation of the current implementation, map type can't be used in equality comparison so that it can't be join key or grouping key.
This PR makes this limitation explicit, to avoid wrong result.
## How was this patch tested?
updated tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15956 from cloud-fan/map-type.
## What changes were proposed in this pull request?
Right now we are testing the most of `CompactibleFileStreamLog` in `FileStreamSinkLogSuite` (because `FileStreamSinkLog` once was the only subclass of `CompactibleFileStreamLog`, but now it's not the case any more).
Let's refactor the tests so that `CompactibleFileStreamLog` is directly tested, making future changes (like https://github.com/apache/spark/pull/15828, https://github.com/apache/spark/pull/15827) to `CompactibleFileStreamLog` much easier to test and much easier to review.
## How was this patch tested?
the PR itself is about tests
Author: Liwei Lin <lwlin7@gmail.com>
Closes#15870 from lw-lin/test-compact-1113.
## What changes were proposed in this pull request?
This PR adds two of the newly added methods of `Dataset`s to Python:
`withWatermark` and `checkpoint`
## How was this patch tested?
Doc tests
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#15921 from brkyvz/py-watermark.
## What changes were proposed in this pull request?
This PR adds the support for `UserDefinedType` when writing out instead of throwing `ClassCastException` in ORC data source.
In more details, `OrcStruct` is being created based on string from`DataType.catalogString`. For user-defined type, it seems it returns `sqlType.simpleString` for `catalogString` by default[1]. However, during type-dispatching to match the output with the schema, it tries to cast to, for example, `StructType`[2].
So, running the codes below (`MyDenseVector` was borrowed[3]) :
``` scala
val data = Seq((1, new UDT.MyDenseVector(Array(0.25, 2.25, 4.25))))
val udtDF = data.toDF("id", "vectors")
udtDF.write.orc("/tmp/test.orc")
```
ends up throwing an exception as below:
```
java.lang.ClassCastException: org.apache.spark.sql.UDT$MyDenseVectorUDT cannot be cast to org.apache.spark.sql.types.ArrayType
at org.apache.spark.sql.hive.HiveInspectors$class.wrapperFor(HiveInspectors.scala:381)
at org.apache.spark.sql.hive.orc.OrcSerializer.wrapperFor(OrcFileFormat.scala:164)
...
```
So, this PR uses `UserDefinedType.sqlType` during finding the correct converter when writing out in ORC data source.
[1]dfdcab00c7/sql/catalyst/src/main/scala/org/apache/spark/sql/types/UserDefinedType.scala (L95)
[2]d2dc8c4a16/sql/hive/src/main/scala/org/apache/spark/sql/hive/HiveInspectors.scala (L326)
[3]2bfed1a0c5/sql/core/src/test/scala/org/apache/spark/sql/UserDefinedTypeSuite.scala (L38-L70)
## How was this patch tested?
Unit tests in `OrcQuerySuite`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15361 from HyukjinKwon/SPARK-17765.
## What changes were proposed in this pull request?
Currently, `DROP TABLE IF EXISTS` shows warning for non-existing tables. However, it had better be quiet for this case by definition of the command.
**BEFORE**
```scala
scala> sql("DROP TABLE IF EXISTS nonexist")
16/11/20 20:48:26 WARN DropTableCommand: org.apache.spark.sql.catalyst.analysis.NoSuchTableException: Table or view 'nonexist' not found in database 'default';
```
**AFTER**
```scala
scala> sql("DROP TABLE IF EXISTS nonexist")
res0: org.apache.spark.sql.DataFrame = []
```
## How was this patch tested?
Manual because this is related to the warning messages instead of exceptions.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#15953 from dongjoon-hyun/SPARK-18517.
## What changes were proposed in this pull request?
This PR adds a new JDBCOption `maxConnections` which means the maximum number of simultaneous JDBC connections allowed. This option applies only to writing with coalesce operation if needed. It defaults to the number of partitions of RDD. Previously, SQL users cannot cannot control this while Scala/Java/Python users can use `coalesce` (or `repartition`) API.
**Reported Scenario**
For the following cases, the number of connections becomes 200 and database cannot handle all of them.
```sql
CREATE OR REPLACE TEMPORARY VIEW resultview
USING org.apache.spark.sql.jdbc
OPTIONS (
url "jdbc:oracle:thin:10.129.10.111:1521:BKDB",
dbtable "result",
user "HIVE",
password "HIVE"
);
-- set spark.sql.shuffle.partitions=200
INSERT OVERWRITE TABLE resultview SELECT g, count(1) AS COUNT FROM tnet.DT_LIVE_INFO GROUP BY g
```
## How was this patch tested?
Manual. Do the followings and see Spark UI.
**Step 1 (MySQL)**
```
CREATE TABLE t1 (a INT);
CREATE TABLE data (a INT);
INSERT INTO data VALUES (1);
INSERT INTO data VALUES (2);
INSERT INTO data VALUES (3);
```
**Step 2 (Spark)**
```scala
SPARK_HOME=$PWD bin/spark-shell --driver-memory 4G --driver-class-path mysql-connector-java-5.1.40-bin.jar
scala> sql("SET spark.sql.shuffle.partitions=3")
scala> sql("CREATE OR REPLACE TEMPORARY VIEW data USING org.apache.spark.sql.jdbc OPTIONS (url 'jdbc:mysql://localhost:3306/t', dbtable 'data', user 'root', password '')")
scala> sql("CREATE OR REPLACE TEMPORARY VIEW t1 USING org.apache.spark.sql.jdbc OPTIONS (url 'jdbc:mysql://localhost:3306/t', dbtable 't1', user 'root', password '', maxConnections '1')")
scala> sql("INSERT OVERWRITE TABLE t1 SELECT a FROM data GROUP BY a")
scala> sql("CREATE OR REPLACE TEMPORARY VIEW t1 USING org.apache.spark.sql.jdbc OPTIONS (url 'jdbc:mysql://localhost:3306/t', dbtable 't1', user 'root', password '', maxConnections '2')")
scala> sql("INSERT OVERWRITE TABLE t1 SELECT a FROM data GROUP BY a")
scala> sql("CREATE OR REPLACE TEMPORARY VIEW t1 USING org.apache.spark.sql.jdbc OPTIONS (url 'jdbc:mysql://localhost:3306/t', dbtable 't1', user 'root', password '', maxConnections '3')")
scala> sql("INSERT OVERWRITE TABLE t1 SELECT a FROM data GROUP BY a")
scala> sql("CREATE OR REPLACE TEMPORARY VIEW t1 USING org.apache.spark.sql.jdbc OPTIONS (url 'jdbc:mysql://localhost:3306/t', dbtable 't1', user 'root', password '', maxConnections '4')")
scala> sql("INSERT OVERWRITE TABLE t1 SELECT a FROM data GROUP BY a")
```
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#15868 from dongjoon-hyun/SPARK-18413.
## What changes were proposed in this pull request?
The nullabilities of `MapObject` can be made more strict by relying on `inputObject.nullable` and `lambdaFunction.nullable`.
Also `ExternalMapToCatalyst.dataType` can be made more strict by relying on `valueConverter.nullable`.
## How was this patch tested?
Existing tests.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#15840 from ueshin/issues/SPARK-18398.
## What changes were proposed in this pull request?
This pr extracts method for preparing arguments from `StaticInvoke`, `Invoke` and `NewInstance` and modify to short circuit if arguments have `null` when `propageteNull == true`.
The steps are as follows:
1. Introduce `InvokeLike` to extract common logic from `StaticInvoke`, `Invoke` and `NewInstance` to prepare arguments.
`StaticInvoke` and `Invoke` had a risk to exceed 64kb JVM limit to prepare arguments but after this patch they can handle them because they share the preparing code of NewInstance, which handles the limit well.
2. Remove unneeded null checking and fix nullability of `NewInstance`.
Avoid some of nullabilty checking which are not needed because the expression is not nullable.
3. Modify to short circuit if arguments have `null` when `needNullCheck == true`.
If `needNullCheck == true`, preparing arguments can be skipped if we found one of them is `null`, so modified to short circuit in the case.
## How was this patch tested?
Existing tests.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#15901 from ueshin/issues/SPARK-18467.
## What changes were proposed in this pull request?
This PR adds code generation to `Generate`. It supports two code paths:
- General `TraversableOnce` based iteration. This used for regular `Generator` (code generation supporting) expressions. This code path expects the expression to return a `TraversableOnce[InternalRow]` and it will iterate over the returned collection. This PR adds code generation for the `stack` generator.
- Specialized `ArrayData/MapData` based iteration. This is used for the `explode`, `posexplode` & `inline` functions and operates directly on the `ArrayData`/`MapData` result that the child of the generator returns.
### Benchmarks
I have added some benchmarks and it seems we can create a nice speedup for explode:
#### Environment
```
Java HotSpot(TM) 64-Bit Server VM 1.8.0_92-b14 on Mac OS X 10.11.6
Intel(R) Core(TM) i7-4980HQ CPU 2.80GHz
```
#### Explode Array
##### Before
```
generate explode array: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate explode array wholestage off 7377 / 7607 2.3 439.7 1.0X
generate explode array wholestage on 6055 / 6086 2.8 360.9 1.2X
```
##### After
```
generate explode array: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate explode array wholestage off 7432 / 7696 2.3 443.0 1.0X
generate explode array wholestage on 631 / 646 26.6 37.6 11.8X
```
#### Explode Map
##### Before
```
generate explode map: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate explode map wholestage off 12792 / 12848 1.3 762.5 1.0X
generate explode map wholestage on 11181 / 11237 1.5 666.5 1.1X
```
##### After
```
generate explode map: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate explode map wholestage off 10949 / 10972 1.5 652.6 1.0X
generate explode map wholestage on 870 / 913 19.3 51.9 12.6X
```
#### Posexplode
##### Before
```
generate posexplode array: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate posexplode array wholestage off 7547 / 7580 2.2 449.8 1.0X
generate posexplode array wholestage on 5786 / 5838 2.9 344.9 1.3X
```
##### After
```
generate posexplode array: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate posexplode array wholestage off 7535 / 7548 2.2 449.1 1.0X
generate posexplode array wholestage on 620 / 624 27.1 37.0 12.1X
```
#### Inline
##### Before
```
generate inline array: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate inline array wholestage off 6935 / 6978 2.4 413.3 1.0X
generate inline array wholestage on 6360 / 6400 2.6 379.1 1.1X
```
##### After
```
generate inline array: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate inline array wholestage off 6940 / 6966 2.4 413.6 1.0X
generate inline array wholestage on 1002 / 1012 16.7 59.7 6.9X
```
#### Stack
##### Before
```
generate stack: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate stack wholestage off 12980 / 13104 1.3 773.7 1.0X
generate stack wholestage on 11566 / 11580 1.5 689.4 1.1X
```
##### After
```
generate stack: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
generate stack wholestage off 12875 / 12949 1.3 767.4 1.0X
generate stack wholestage on 840 / 845 20.0 50.0 15.3X
```
## How was this patch tested?
Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Author: Herman van Hovell <hvanhovell@questtec.nl>
Closes#13065 from hvanhovell/SPARK-15214.
## What changes were proposed in this pull request?
The previous documentation and example for DateDiff was wrong.
## How was this patch tested?
Doc only change.
Author: Reynold Xin <rxin@databricks.com>
Closes#15937 from rxin/datediff-doc.
## What changes were proposed in this pull request?
Fix since 2.1.0 on new SparkSession.close() method. I goofed in https://github.com/apache/spark/pull/15932 because it was back-ported to 2.1 instead of just master as originally planned.
Author: Sean Owen <sowen@cloudera.com>
Closes#15938 from srowen/SPARK-18448.2.
## What changes were proposed in this pull request?
Just adds `close()` + `Closeable` as a synonym for `stop()`. This makes it usable in Java in try-with-resources, as suggested by ash211 (`Closeable` extends `AutoCloseable` BTW)
## How was this patch tested?
Existing tests
Author: Sean Owen <sowen@cloudera.com>
Closes#15932 from srowen/SPARK-18448.
## What changes were proposed in this pull request?
The issue in ForeachSink is the new created DataSet still uses the old QueryExecution. When `foreachPartition` is called, `QueryExecution.toString` will be called and then fail because it doesn't know how to plan EventTimeWatermark.
This PR just replaces the QueryExecution with IncrementalExecution to fix the issue.
## How was this patch tested?
`test("foreach with watermark")`.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#15934 from zsxwing/SPARK-18497.
## What changes were proposed in this pull request?
I'm spending more time at the design & code level for cost-based optimizer now, and have found a number of issues related to maintainability and compatibility that I will like to address.
This is a small pull request to clean up AnalyzeColumnCommand:
1. Removed warning on duplicated columns. Warnings in log messages are useless since most users that run SQL don't see them.
2. Removed the nested updateStats function, by just inlining the function.
3. Renamed a few functions to better reflect what they do.
4. Removed the factory apply method for ColumnStatStruct. It is a bad pattern to use a apply method that returns an instantiation of a class that is not of the same type (ColumnStatStruct.apply used to return CreateNamedStruct).
5. Renamed ColumnStatStruct to just AnalyzeColumnCommand.
6. Added more documentation explaining some of the non-obvious return types and code blocks.
In follow-up pull requests, I'd like to address the following:
1. Get rid of the Map[String, ColumnStat] map, since internally we should be using Attribute to reference columns, rather than strings.
2. Decouple the fields exposed by ColumnStat and internals of Spark SQL's execution path. Currently the two are coupled because ColumnStat takes in an InternalRow.
3. Correctness: Remove code path that stores statistics in the catalog using the base64 encoding of the UnsafeRow format, which is not stable across Spark versions.
4. Clearly document the data representation stored in the catalog for statistics.
## How was this patch tested?
Affected test cases have been updated.
Author: Reynold Xin <rxin@databricks.com>
Closes#15933 from rxin/SPARK-18505.
## What changes were proposed in this pull request?
HDFS `write` may just hang until timeout if some network error happens. It's better to enable interrupts to allow stopping the query fast on HDFS.
This PR just changes the logic to only disable interrupts for local file system, as HADOOP-10622 only happens for local file system.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#15911 from zsxwing/interrupt-on-dfs.
## What changes were proposed in this pull request?
When reading zero columns (e.g., count(*)) from ORC or any other format that uses HiveShim, actually set the read column list to empty for Hive to use.
## How was this patch tested?
Query correctness is handled by existing unit tests. I'm happy to add more if anyone can point out some case that is not covered.
Reduction in data read can be verified in the UI when built with a recent version of Hadoop say:
```
build/mvn -Pyarn -Phadoop-2.7 -Dhadoop.version=2.7.0 -Phive -DskipTests clean package
```
However the default Hadoop 2.2 that is used for unit tests does not report actual bytes read and instead just full file sizes (see FileScanRDD.scala line 80). Therefore I don't think there is a good way to add a unit test for this.
I tested with the following setup using above build options
```
case class OrcData(intField: Long, stringField: String)
spark.range(1,1000000).map(i => OrcData(i, s"part-$i")).toDF().write.format("orc").save("orc_test")
sql(
s"""CREATE EXTERNAL TABLE orc_test(
| intField LONG,
| stringField STRING
|)
|STORED AS ORC
|LOCATION '${System.getProperty("user.dir") + "/orc_test"}'
""".stripMargin)
```
## Results
query | Spark 2.0.2 | this PR
---|---|---
`sql("select count(*) from orc_test").collect`|4.4 MB|199.4 KB
`sql("select intField from orc_test").collect`|743.4 KB|743.4 KB
`sql("select * from orc_test").collect`|4.4 MB|4.4 MB
Author: Andrew Ray <ray.andrew@gmail.com>
Closes#15898 from aray/sql-orc-no-col.
## What changes were proposed in this pull request?
CompactibleFileStreamLog relys on "compactInterval" to detect a compaction batch. If the "compactInterval" is reset by user, CompactibleFileStreamLog will return wrong answer, resulting data loss. This PR procides a way to check the validity of 'compactInterval', and calculate an appropriate value.
## How was this patch tested?
When restart a stream, we change the 'spark.sql.streaming.fileSource.log.compactInterval' different with the former one.
The primary solution to this issue was given by uncleGen
Added extensions include an additional metadata field in OffsetSeq and CompactibleFileStreamLog APIs. zsxwing
Author: Tyson Condie <tcondie@gmail.com>
Author: genmao.ygm <genmao.ygm@genmaoygmdeMacBook-Air.local>
Closes#15852 from tcondie/spark-18187.
## What changes were proposed in this pull request?
This patch fixes a `ClassCastException: java.lang.Integer cannot be cast to java.lang.Long` error which could occur in the HistoryServer while trying to process a deserialized `SparkListenerDriverAccumUpdates` event.
The problem stems from how `jackson-module-scala` handles primitive type parameters (see https://github.com/FasterXML/jackson-module-scala/wiki/FAQ#deserializing-optionint-and-other-primitive-challenges for more details). This was causing a problem where our code expected a field to be deserialized as a `(Long, Long)` tuple but we got an `(Int, Int)` tuple instead.
This patch hacks around this issue by registering a custom `Converter` with Jackson in order to deserialize the tuples as `(Object, Object)` and perform the appropriate casting.
## How was this patch tested?
New regression tests in `SQLListenerSuite`.
Author: Josh Rosen <joshrosen@databricks.com>
Closes#15922 from JoshRosen/SPARK-18462.
## What changes were proposed in this pull request?
The current semantic of the warehouse config:
1. it's a static config, which means you can't change it once your spark application is launched.
2. Once a database is created, its location won't change even the warehouse path config is changed.
3. default database is a special case, although its location is fixed, but the locations of tables created in it are not. If a Spark app starts with warehouse path B(while the location of default database is A), then users create a table `tbl` in default database, its location will be `B/tbl` instead of `A/tbl`. If uses change the warehouse path config to C, and create another table `tbl2`, its location will still be `B/tbl2` instead of `C/tbl2`.
rule 3 doesn't make sense and I think we made it by mistake, not intentionally. Data source tables don't follow rule 3 and treat default database like normal ones.
This PR fixes hive serde tables to make it consistent with data source tables.
## How was this patch tested?
HiveSparkSubmitSuite
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15812 from cloud-fan/default-db.
## What changes were proposed in this pull request?
In ShuffleExchange, the nodename's extraInfo are the same when exchangeCoordinator.isEstimated
is true or false.
Merge the two situation in the PR.
Author: root <root@iZbp1gsnrlfzjxh82cz80vZ.(none)>
Closes#15920 from windpiger/DupNodeNameShuffleExchange.
## What changes were proposed in this pull request?
I found the documentation for the sample method to be confusing, this adds more clarification across all languages.
- [x] Scala
- [x] Python
- [x] R
- [x] RDD Scala
- [ ] RDD Python with SEED
- [X] RDD Java
- [x] RDD Java with SEED
- [x] RDD Python
## How was this patch tested?
NA
Please review https://cwiki.apache.org/confluence/display/SPARK/Contributing+to+Spark before opening a pull request.
Author: anabranch <wac.chambers@gmail.com>
Author: Bill Chambers <bill@databricks.com>
Closes#15815 from anabranch/SPARK-18365.
## What changes were proposed in this pull request?
Before Spark 2.1, users can create an external data source table without schema, and we will infer the table schema at runtime. In Spark 2.1, we decided to infer the schema when the table was created, so that we don't need to infer it again and again at runtime.
This is a good improvement, but we should still respect and support old tables which doesn't store table schema in metastore.
## How was this patch tested?
regression test.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15900 from cloud-fan/hive-catalog.
## What changes were proposed in this pull request?
The nullability of `WrapOption` should be `false`.
## How was this patch tested?
Existing tests.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#15887 from ueshin/issues/SPARK-18442.
## What changes were proposed in this pull request?
While being evaluated in Spark SQL, Hive UDAFs don't support partial aggregation. This PR migrates `HiveUDAFFunction`s to `TypedImperativeAggregate`, which already provides partial aggregation support for aggregate functions that may use arbitrary Java objects as aggregation states.
The following snippet shows the effect of this PR:
```scala
import org.apache.hadoop.hive.ql.udf.generic.GenericUDAFMax
sql(s"CREATE FUNCTION hive_max AS '${classOf[GenericUDAFMax].getName}'")
spark.range(100).createOrReplaceTempView("t")
// A query using both Spark SQL native `max` and Hive `max`
sql(s"SELECT max(id), hive_max(id) FROM t").explain()
```
Before this PR:
```
== Physical Plan ==
SortAggregate(key=[], functions=[max(id#1L), default.hive_max(default.hive_max, HiveFunctionWrapper(org.apache.hadoop.hive.ql.udf.generic.GenericUDAFMax,org.apache.hadoop.hive.ql.udf.generic.GenericUDAFMax7475f57e), id#1L, false, 0, 0)])
+- Exchange SinglePartition
+- *Range (0, 100, step=1, splits=Some(1))
```
After this PR:
```
== Physical Plan ==
SortAggregate(key=[], functions=[max(id#1L), default.hive_max(default.hive_max, HiveFunctionWrapper(org.apache.hadoop.hive.ql.udf.generic.GenericUDAFMax,org.apache.hadoop.hive.ql.udf.generic.GenericUDAFMax5e18a6a7), id#1L, false, 0, 0)])
+- Exchange SinglePartition
+- SortAggregate(key=[], functions=[partial_max(id#1L), partial_default.hive_max(default.hive_max, HiveFunctionWrapper(org.apache.hadoop.hive.ql.udf.generic.GenericUDAFMax,org.apache.hadoop.hive.ql.udf.generic.GenericUDAFMax5e18a6a7), id#1L, false, 0, 0)])
+- *Range (0, 100, step=1, splits=Some(1))
```
The tricky part of the PR is mostly about updating and passing around aggregation states of `HiveUDAFFunction`s since the aggregation state of a Hive UDAF may appear in three different forms. Let's take a look at the testing `MockUDAF` added in this PR as an example. This UDAF computes the count of non-null values together with the count of nulls of a given column. Its aggregation state may appear as the following forms at different time:
1. A `MockUDAFBuffer`, which is a concrete subclass of `GenericUDAFEvaluator.AggregationBuffer`
The form used by Hive UDAF API. This form is required by the following scenarios:
- Calling `GenericUDAFEvaluator.iterate()` to update an existing aggregation state with new input values.
- Calling `GenericUDAFEvaluator.terminate()` to get the final aggregated value from an existing aggregation state.
- Calling `GenericUDAFEvaluator.merge()` to merge other aggregation states into an existing aggregation state.
The existing aggregation state to be updated must be in this form.
Conversions:
- To form 2:
`GenericUDAFEvaluator.terminatePartial()`
- To form 3:
Convert to form 2 first, and then to 3.
2. An `Object[]` array containing two `java.lang.Long` values.
The form used to interact with Hive's `ObjectInspector`s. This form is required by the following scenarios:
- Calling `GenericUDAFEvaluator.terminatePartial()` to convert an existing aggregation state in form 1 to form 2.
- Calling `GenericUDAFEvaluator.merge()` to merge other aggregation states into an existing aggregation state.
The input aggregation state must be in this form.
Conversions:
- To form 1:
No direct method. Have to create an empty `AggregationBuffer` and merge it into the empty buffer.
- To form 3:
`unwrapperFor()`/`unwrap()` method of `HiveInspectors`
3. The byte array that holds data of an `UnsafeRow` with two `LongType` fields.
The form used by Spark SQL to shuffle partial aggregation results. This form is required because `TypedImperativeAggregate` always asks its subclasses to serialize their aggregation states into a byte array.
Conversions:
- To form 1:
Convert to form 2 first, and then to 1.
- To form 2:
`wrapperFor()`/`wrap()` method of `HiveInspectors`
Here're some micro-benchmark results produced by the most recent master and this PR branch.
Master:
```
Java HotSpot(TM) 64-Bit Server VM 1.8.0_92-b14 on Mac OS X 10.10.5
Intel(R) Core(TM) i7-4960HQ CPU 2.60GHz
hive udaf vs spark af: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
w/o groupBy 339 / 372 3.1 323.2 1.0X
w/ groupBy 503 / 529 2.1 479.7 0.7X
```
This PR:
```
Java HotSpot(TM) 64-Bit Server VM 1.8.0_92-b14 on Mac OS X 10.10.5
Intel(R) Core(TM) i7-4960HQ CPU 2.60GHz
hive udaf vs spark af: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
w/o groupBy 116 / 126 9.0 110.8 1.0X
w/ groupBy 151 / 159 6.9 144.0 0.8X
```
Benchmark code snippet:
```scala
test("Hive UDAF benchmark") {
val N = 1 << 20
sparkSession.sql(s"CREATE TEMPORARY FUNCTION hive_max AS '${classOf[GenericUDAFMax].getName}'")
val benchmark = new Benchmark(
name = "hive udaf vs spark af",
valuesPerIteration = N,
minNumIters = 5,
warmupTime = 5.seconds,
minTime = 5.seconds,
outputPerIteration = true
)
benchmark.addCase("w/o groupBy") { _ =>
sparkSession.range(N).agg("id" -> "hive_max").collect()
}
benchmark.addCase("w/ groupBy") { _ =>
sparkSession.range(N).groupBy($"id" % 10).agg("id" -> "hive_max").collect()
}
benchmark.run()
sparkSession.sql(s"DROP TEMPORARY FUNCTION IF EXISTS hive_max")
}
```
## How was this patch tested?
New test suite `HiveUDAFSuite` is added.
Author: Cheng Lian <lian@databricks.com>
Closes#15703 from liancheng/partial-agg-hive-udaf.
## What changes were proposed in this pull request?
SPARK-18459: triggerId seems like a number that should be increasing with each trigger, whether or not there is data in it. However, actually, triggerId increases only where there is a batch of data in a trigger. So its better to rename it to batchId.
SPARK-18460: triggerDetails was missing from json representation. Fixed it.
## How was this patch tested?
Updated existing unit tests.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#15895 from tdas/SPARK-18459.
### What changes were proposed in this pull request?
Currently, when CTE is used in RunnableCommand, the Analyzer does not replace the logical node `With`. The child plan of RunnableCommand is not resolved. Thus, the output of the `With` plan node looks very confusing.
For example,
```
sql(
"""
|CREATE VIEW cte_view AS
|WITH w AS (SELECT 1 AS n), cte1 (select 2), cte2 as (select 3)
|SELECT n FROM w
""".stripMargin).explain()
```
The output is like
```
ExecutedCommand
+- CreateViewCommand `cte_view`, WITH w AS (SELECT 1 AS n), cte1 (select 2), cte2 as (select 3)
SELECT n FROM w, false, false, PersistedView
+- 'With [(w,SubqueryAlias w
+- Project [1 AS n#16]
+- OneRowRelation$
), (cte1,'SubqueryAlias cte1
+- 'Project [unresolvedalias(2, None)]
+- OneRowRelation$
), (cte2,'SubqueryAlias cte2
+- 'Project [unresolvedalias(3, None)]
+- OneRowRelation$
)]
+- 'Project ['n]
+- 'UnresolvedRelation `w`
```
After the fix, the output is as shown below.
```
ExecutedCommand
+- CreateViewCommand `cte_view`, WITH w AS (SELECT 1 AS n), cte1 (select 2), cte2 as (select 3)
SELECT n FROM w, false, false, PersistedView
+- CTE [w, cte1, cte2]
: :- SubqueryAlias w
: : +- Project [1 AS n#16]
: : +- OneRowRelation$
: :- 'SubqueryAlias cte1
: : +- 'Project [unresolvedalias(2, None)]
: : +- OneRowRelation$
: +- 'SubqueryAlias cte2
: +- 'Project [unresolvedalias(3, None)]
: +- OneRowRelation$
+- 'Project ['n]
+- 'UnresolvedRelation `w`
```
BTW, this PR also fixes the output of the view type.
### How was this patch tested?
Manual
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15854 from gatorsmile/cteName.
## What changes were proposed in this pull request?
Small fix, fix the errors caused by lint check in Java
- Clear unused objects and `UnusedImports`.
- Add comments around the method `finalize` of `NioBufferedFileInputStream`to turn off checkstyle.
- Cut the line which is longer than 100 characters into two lines.
## How was this patch tested?
Travis CI.
```
$ build/mvn -T 4 -q -DskipTests -Pyarn -Phadoop-2.3 -Pkinesis-asl -Phive -Phive-thriftserver install
$ dev/lint-java
```
Before:
```
Checkstyle checks failed at following occurrences:
[ERROR] src/main/java/org/apache/spark/network/util/TransportConf.java:[21,8] (imports) UnusedImports: Unused import - org.apache.commons.crypto.cipher.CryptoCipherFactory.
[ERROR] src/test/java/org/apache/spark/network/sasl/SparkSaslSuite.java:[516,5] (modifier) RedundantModifier: Redundant 'public' modifier.
[ERROR] src/main/java/org/apache/spark/io/NioBufferedFileInputStream.java:[133] (coding) NoFinalizer: Avoid using finalizer method.
[ERROR] src/main/java/org/apache/spark/sql/catalyst/expressions/UnsafeMapData.java:[71] (sizes) LineLength: Line is longer than 100 characters (found 113).
[ERROR] src/main/java/org/apache/spark/sql/catalyst/expressions/UnsafeArrayData.java:[112] (sizes) LineLength: Line is longer than 100 characters (found 110).
[ERROR] src/test/java/org/apache/spark/sql/catalyst/expressions/HiveHasherSuite.java:[31,17] (modifier) ModifierOrder: 'static' modifier out of order with the JLS suggestions.
[ERROR]src/main/java/org/apache/spark/examples/ml/JavaLogisticRegressionWithElasticNetExample.java:[64] (sizes) LineLength: Line is longer than 100 characters (found 103).
[ERROR] src/main/java/org/apache/spark/examples/ml/JavaInteractionExample.java:[22,8] (imports) UnusedImports: Unused import - org.apache.spark.ml.linalg.Vectors.
[ERROR] src/main/java/org/apache/spark/examples/ml/JavaInteractionExample.java:[51] (regexp) RegexpSingleline: No trailing whitespace allowed.
```
After:
```
$ build/mvn -T 4 -q -DskipTests -Pyarn -Phadoop-2.3 -Pkinesis-asl -Phive -Phive-thriftserver install
$ dev/lint-java
Using `mvn` from path: /home/travis/build/ConeyLiu/spark/build/apache-maven-3.3.9/bin/mvn
Checkstyle checks passed.
```
Author: Xianyang Liu <xyliu0530@icloud.com>
Closes#15865 from ConeyLiu/master.
## What changes were proposed in this pull request?
This PR aims to improve DataSource option keys to be more case-insensitive
DataSource partially use CaseInsensitiveMap in code-path. For example, the following fails to find url.
```scala
val df = spark.createDataFrame(sparkContext.parallelize(arr2x2), schema2)
df.write.format("jdbc")
.option("UrL", url1)
.option("dbtable", "TEST.SAVETEST")
.options(properties.asScala)
.save()
```
This PR makes DataSource options to use CaseInsensitiveMap internally and also makes DataSource to use CaseInsensitiveMap generally except `InMemoryFileIndex` and `InsertIntoHadoopFsRelationCommand`. We can not pass them CaseInsensitiveMap because they creates new case-sensitive HadoopConfs by calling newHadoopConfWithOptions(options) inside.
## How was this patch tested?
Pass the Jenkins test with newly added test cases.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#15884 from dongjoon-hyun/SPARK-18433.
## What changes were proposed in this pull request?
it's weird that every session can set its own warehouse path at runtime, we should forbid it and make it a static conf.
## How was this patch tested?
existing tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15825 from cloud-fan/warehouse.
## What changes were proposed in this pull request?
Commit f14ae4900a broke the scala 2.10 build. This PR fixes this by simplifying the used pattern match.
## How was this patch tested?
Tested building manually. Ran `build/sbt -Dscala-2.10 -Pscala-2.10 package`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#15891 from hvanhovell/SPARK-18300-scala-2.10.
## What changes were proposed in this pull request?
SPARK-18012 refactored the file write path in FileStreamSink using FileFormatWriter which always uses the default non-streaming QueryExecution to perform the writes. This is wrong for FileStreamSink, because the streaming QueryExecution (i.e. IncrementalExecution) should be used for correctly incrementalizing aggregation. The addition of watermarks in SPARK-18124, file stream sink should logically supports aggregation + watermark + append mode. But actually it fails with
```
16:23:07.389 ERROR org.apache.spark.sql.execution.streaming.StreamExecution: Query query-0 terminated with error
java.lang.AssertionError: assertion failed: No plan for EventTimeWatermark timestamp#7: timestamp, interval 10 seconds
+- LocalRelation [timestamp#7]
at scala.Predef$.assert(Predef.scala:170)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.plan(QueryPlanner.scala:92)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$2$$anonfun$apply$2.apply(QueryPlanner.scala:77)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$2$$anonfun$apply$2.apply(QueryPlanner.scala:74)
at scala.collection.TraversableOnce$$anonfun$foldLeft$1.apply(TraversableOnce.scala:157)
at scala.collection.TraversableOnce$$anonfun$foldLeft$1.apply(TraversableOnce.scala:157)
at scala.collection.Iterator$class.foreach(Iterator.scala:893)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1336)
at scala.collection.TraversableOnce$class.foldLeft(TraversableOnce.scala:157)
at scala.collection.AbstractIterator.foldLeft(Iterator.scala:1336)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$2.apply(QueryPlanner.scala:74)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$2.apply(QueryPlanner.scala:66)
at scala.collection.Iterator$$anon$12.nextCur(Iterator.scala:434)
at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.plan(QueryPlanner.scala:92)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$2$$anonfun$apply$2.apply(QueryPlanner.scala:77)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$2$$anonfun$apply$2.apply(QueryPlanner.scala:74)
```
This PR fixes it by passing the correct query execution.
## How was this patch tested?
New unit test
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#15885 from tdas/SPARK-18440.
## What changes were proposed in this pull request?
It would be nice if memory sinks can also recover from checkpoints. For correctness reasons, the only time we should support it is in `Complete` OutputMode. We can support this in CompleteMode, because the output of the StateStore is already persisted in the checkpoint directory.
## How was this patch tested?
Unit test
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#15801 from brkyvz/mem-stream.
## What changes were proposed in this pull request?
The largest parallelism in PartitioningAwareFileIndex #listLeafFilesInParallel() is 10000 in hard code. We may need to make this number configurable. And in PR, I reduce it to 100.
## How was this patch tested?
Existing ut.
Author: genmao.ygm <genmao.ygm@genmaoygmdeMacBook-Air.local>
Author: dylon <hustyugm@gmail.com>
Closes#15829 from uncleGen/SPARK-18379.
## What changes were proposed in this pull request?
The `FoldablePropagation` optimizer rule, pulls foldable values out from under an `Expand`. This breaks the `Expand` in two ways:
- It rewrites the output attributes of the `Expand`. We explicitly define output attributes for `Expand`, these are (unfortunately) considered as part of the expressions of the `Expand` and can be rewritten.
- Expand can actually change the column (it will typically re-use the attributes or the underlying plan). This means that we cannot safely propagate the expressions from under an `Expand`.
This PR fixes this and (hopefully) other issues by explicitly whitelisting allowed operators.
## How was this patch tested?
Added tests to `FoldablePropagationSuite` and to `SQLQueryTestSuite`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#15857 from hvanhovell/SPARK-18300.
### What changes were proposed in this pull request?
When the exception is an invocation exception during function lookup, we return a useless/confusing error message:
For example,
```Scala
df.selectExpr("concat_ws()")
```
Below is the error message we got:
```
null; line 1 pos 0
org.apache.spark.sql.AnalysisException: null; line 1 pos 0
```
To get the meaningful error message, we need to get the cause. The fix is exactly the same as what we did in https://github.com/apache/spark/pull/12136. After the fix, the message we got is the exception issued in the constuctor of function implementation:
```
requirement failed: concat_ws requires at least one argument.; line 1 pos 0
org.apache.spark.sql.AnalysisException: requirement failed: concat_ws requires at least one argument.; line 1 pos 0
```
### How was this patch tested?
Added test cases.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15878 from gatorsmile/functionNotFound.
This PR adds a new method `withWatermark` to the `Dataset` API, which can be used specify an _event time watermark_. An event time watermark allows the streaming engine to reason about the point in time after which we no longer expect to see late data. This PR also has augmented `StreamExecution` to use this watermark for several purposes:
- To know when a given time window aggregation is finalized and thus results can be emitted when using output modes that do not allow updates (e.g. `Append` mode).
- To minimize the amount of state that we need to keep for on-going aggregations, by evicting state for groups that are no longer expected to change. Although, we do still maintain all state if the query requires (i.e. if the event time is not present in the `groupBy` or when running in `Complete` mode).
An example that emits windowed counts of records, waiting up to 5 minutes for late data to arrive.
```scala
df.withWatermark("eventTime", "5 minutes")
.groupBy(window($"eventTime", "1 minute") as 'window)
.count()
.writeStream
.format("console")
.mode("append") // In append mode, we only output finalized aggregations.
.start()
```
### Calculating the watermark.
The current event time is computed by looking at the `MAX(eventTime)` seen this epoch across all of the partitions in the query minus some user defined _delayThreshold_. An additional constraint is that the watermark must increase monotonically.
Note that since we must coordinate this value across partitions occasionally, the actual watermark used is only guaranteed to be at least `delay` behind the actual event time. In some cases we may still process records that arrive more than delay late.
This mechanism was chosen for the initial implementation over processing time for two reasons:
- it is robust to downtime that could affect processing delay
- it does not require syncing of time or timezones between the producer and the processing engine.
### Other notable implementation details
- A new trigger metric `eventTimeWatermark` outputs the current value of the watermark.
- We mark the event time column in the `Attribute` metadata using the key `spark.watermarkDelay`. This allows downstream operations to know which column holds the event time. Operations like `window` propagate this metadata.
- `explain()` marks the watermark with a suffix of `-T${delayMs}` to ease debugging of how this information is propagated.
- Currently, we don't filter out late records, but instead rely on the state store to avoid emitting records that are both added and filtered in the same epoch.
### Remaining in this PR
- [ ] The test for recovery is currently failing as we don't record the watermark used in the offset log. We will need to do so to ensure determinism, but this is deferred until #15626 is merged.
### Other follow-ups
There are some natural additional features that we should consider for future work:
- Ability to write records that arrive too late to some external store in case any out-of-band remediation is required.
- `Update` mode so you can get partial results before a group is evicted.
- Other mechanisms for calculating the watermark. In particular a watermark based on quantiles would be more robust to outliers.
Author: Michael Armbrust <michael@databricks.com>
Closes#15702 from marmbrus/watermarks.
## What changes were proposed in this pull request?
Return an Analysis exception when there is a correlated non-equality predicate in a subquery and the correlated column from the outer reference is not from the immediate parent operator of the subquery. This PR prevents incorrect results from subquery transformation in such case.
Test cases, both positive and negative tests, are added.
## How was this patch tested?
sql/test, catalyst/test, hive/test, and scenarios that will produce incorrect results without this PR and product correct results when subquery transformation does happen.
Author: Nattavut Sutyanyong <nsy.can@gmail.com>
Closes#15763 from nsyca/spark-17348.
## What changes were proposed in this pull request?
StateStore.get() causes temporary files to be created immediately, even if the store is not used to make updates for new version. The temp file is not closed as store.commit() is not called in those cases, thus keeping the output stream to temp file open forever.
This PR fixes it by opening the temp file only when there are updates being made.
## How was this patch tested?
New unit test
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#15859 from tdas/SPARK-18416.
## What changes were proposed in this pull request?
This removes the serialization test from RegexpExpressionsSuite and
replaces it by serializing all expressions in checkEvaluation.
This also fixes math constant expressions by making LeafMathExpression
Serializable and fixes NumberFormat values that are null or invalid
after serialization.
## How was this patch tested?
This patch is to tests.
Author: Ryan Blue <blue@apache.org>
Closes#15847 from rdblue/SPARK-18387-fix-serializable-expressions.
## What changes were proposed in this pull request?
Currently, `SQLBuilder` handles `LIMIT` by always adding `LIMIT` at the end of the generated subSQL. It makes `RuntimeException`s like the following. This PR adds a parenthesis always except `SubqueryAlias` is used together with `LIMIT`.
**Before**
``` scala
scala> sql("CREATE TABLE tbl(id INT)")
scala> sql("CREATE VIEW v1(id2) AS SELECT id FROM tbl LIMIT 2")
java.lang.RuntimeException: Failed to analyze the canonicalized SQL: ...
```
**After**
``` scala
scala> sql("CREATE TABLE tbl(id INT)")
scala> sql("CREATE VIEW v1(id2) AS SELECT id FROM tbl LIMIT 2")
scala> sql("SELECT id2 FROM v1")
res4: org.apache.spark.sql.DataFrame = [id2: int]
```
**Fixed cases in this PR**
The following two cases are the detail query plans having problematic SQL generations.
1. `SELECT * FROM (SELECT id FROM tbl LIMIT 2)`
Please note that **FROM SELECT** part of the generated SQL in the below. When we don't use '()' for limit, this fails.
```scala
# Original logical plan:
Project [id#1]
+- GlobalLimit 2
+- LocalLimit 2
+- Project [id#1]
+- MetastoreRelation default, tbl
# Canonicalized logical plan:
Project [gen_attr_0#1 AS id#4]
+- SubqueryAlias tbl
+- Project [gen_attr_0#1]
+- GlobalLimit 2
+- LocalLimit 2
+- Project [gen_attr_0#1]
+- SubqueryAlias gen_subquery_0
+- Project [id#1 AS gen_attr_0#1]
+- SQLTable default, tbl, [id#1]
# Generated SQL:
SELECT `gen_attr_0` AS `id` FROM (SELECT `gen_attr_0` FROM SELECT `gen_attr_0` FROM (SELECT `id` AS `gen_attr_0` FROM `default`.`tbl`) AS gen_subquery_0 LIMIT 2) AS tbl
```
2. `SELECT * FROM (SELECT id FROM tbl TABLESAMPLE (2 ROWS))`
Please note that **((~~~) AS gen_subquery_0 LIMIT 2)** in the below. When we use '()' for limit on `SubqueryAlias`, this fails.
```scala
# Original logical plan:
Project [id#1]
+- Project [id#1]
+- GlobalLimit 2
+- LocalLimit 2
+- MetastoreRelation default, tbl
# Canonicalized logical plan:
Project [gen_attr_0#1 AS id#4]
+- SubqueryAlias tbl
+- Project [gen_attr_0#1]
+- GlobalLimit 2
+- LocalLimit 2
+- SubqueryAlias gen_subquery_0
+- Project [id#1 AS gen_attr_0#1]
+- SQLTable default, tbl, [id#1]
# Generated SQL:
SELECT `gen_attr_0` AS `id` FROM (SELECT `gen_attr_0` FROM ((SELECT `id` AS `gen_attr_0` FROM `default`.`tbl`) AS gen_subquery_0 LIMIT 2)) AS tbl
```
## How was this patch tested?
Pass the Jenkins test with a newly added test case.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#15546 from dongjoon-hyun/SPARK-17982.
## What changes were proposed in this pull request?
As of current 2.1, INSERT OVERWRITE with dynamic partitions against a Datasource table will overwrite the entire table instead of only the partitions matching the static keys, as in Hive. It also doesn't respect custom partition locations.
This PR adds support for all these operations to Datasource tables managed by the Hive metastore. It is implemented as follows
- During planning time, the full set of partitions affected by an INSERT or OVERWRITE command is read from the Hive metastore.
- The planner identifies any partitions with custom locations and includes this in the write task metadata.
- FileFormatWriter tasks refer to this custom locations map when determining where to write for dynamic partition output.
- When the write job finishes, the set of written partitions is compared against the initial set of matched partitions, and the Hive metastore is updated to reflect the newly added / removed partitions.
It was necessary to introduce a method for staging files with absolute output paths to `FileCommitProtocol`. These files are not handled by the Hadoop output committer but are moved to their final locations when the job commits.
The overwrite behavior of legacy Datasource tables is also changed: no longer will the entire table be overwritten if a partial partition spec is present.
cc cloud-fan yhuai
## How was this patch tested?
Unit tests, existing tests.
Author: Eric Liang <ekl@databricks.com>
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15814 from ericl/sc-5027.
## What changes were proposed in this pull request?
Randomized tests in `ObjectHashAggregateSuite` is being flaky and breaks PR builds. This PR disables them temporarily to bring back the PR build.
## How was this patch tested?
N/A
Author: Cheng Lian <lian@databricks.com>
Closes#15845 from liancheng/ignore-flaky-object-hash-agg-suite.
## What changes were proposed in this pull request?
This PR corrects several partition related behaviors of `ExternalCatalog`:
1. default partition location should not always lower case the partition column names in path string(fix `HiveExternalCatalog`)
2. rename partition should not always lower case the partition column names in updated partition path string(fix `HiveExternalCatalog`)
3. rename partition should update the partition location only for managed table(fix `InMemoryCatalog`)
4. create partition with existing directory should be fine(fix `InMemoryCatalog`)
5. create partition with non-existing directory should create that directory(fix `InMemoryCatalog`)
6. drop partition from external table should not delete the directory(fix `InMemoryCatalog`)
## How was this patch tested?
new tests in `ExternalCatalogSuite`
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15797 from cloud-fan/partition.
(Link to Jira issue: https://issues.apache.org/jira/browse/SPARK-17993)
## What changes were proposed in this pull request?
PR #14690 broke parquet log output redirection for converted partitioned Hive tables. For example, when querying parquet files written by Parquet-mr 1.6.0 Spark prints a torrent of (harmless) warning messages from the Parquet reader:
```
Oct 18, 2016 7:42:18 PM WARNING: org.apache.parquet.CorruptStatistics: Ignoring statistics because created_by could not be parsed (see PARQUET-251): parquet-mr version 1.6.0
org.apache.parquet.VersionParser$VersionParseException: Could not parse created_by: parquet-mr version 1.6.0 using format: (.+) version ((.*) )?\(build ?(.*)\)
at org.apache.parquet.VersionParser.parse(VersionParser.java:112)
at org.apache.parquet.CorruptStatistics.shouldIgnoreStatistics(CorruptStatistics.java:60)
at org.apache.parquet.format.converter.ParquetMetadataConverter.fromParquetStatistics(ParquetMetadataConverter.java:263)
at org.apache.parquet.hadoop.ParquetFileReader$Chunk.readAllPages(ParquetFileReader.java:583)
at org.apache.parquet.hadoop.ParquetFileReader.readNextRowGroup(ParquetFileReader.java:513)
at org.apache.spark.sql.execution.datasources.parquet.VectorizedParquetRecordReader.checkEndOfRowGroup(VectorizedParquetRecordReader.java:270)
at org.apache.spark.sql.execution.datasources.parquet.VectorizedParquetRecordReader.nextBatch(VectorizedParquetRecordReader.java:225)
at org.apache.spark.sql.execution.datasources.parquet.VectorizedParquetRecordReader.nextKeyValue(VectorizedParquetRecordReader.java:137)
at org.apache.spark.sql.execution.datasources.RecordReaderIterator.hasNext(RecordReaderIterator.scala:39)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:102)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:162)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:102)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.scan_nextBatch$(Unknown Source)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$8$$anon$1.hasNext(WholeStageCodegenExec.scala:372)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:231)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:225)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:803)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:803)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:319)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:283)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:99)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:282)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
```
This only happens during execution, not planning, and it doesn't matter what log level the `SparkContext` is set to. That's because Parquet (versions < 1.9) doesn't use slf4j for logging. Note, you can tell that log redirection is not working here because the log message format does not conform to the default Spark log message format.
This is a regression I noted as something we needed to fix as a follow up.
It appears that the problem arose because we removed the call to `inferSchema` during Hive table conversion. That call is what triggered the output redirection.
## How was this patch tested?
I tested this manually in four ways:
1. Executing `spark.sqlContext.range(10).selectExpr("id as a").write.mode("overwrite").parquet("test")`.
2. Executing `spark.read.format("parquet").load(legacyParquetFile).show` for a Parquet file `legacyParquetFile` written using Parquet-mr 1.6.0.
3. Executing `select * from legacy_parquet_table limit 1` for some unpartitioned Parquet-based Hive table written using Parquet-mr 1.6.0.
4. Executing `select * from legacy_partitioned_parquet_table where partcol=x limit 1` for some partitioned Parquet-based Hive table written using Parquet-mr 1.6.0.
I ran each test with a new instance of `spark-shell` or `spark-sql`.
Incidentally, I found that test case 3 was not a regression—redirection was not occurring in the master codebase prior to #14690.
I spent some time working on a unit test, but based on my experience working on this ticket I feel that automated testing here is far from feasible.
cc ericl dongjoon-hyun
Author: Michael Allman <michael@videoamp.com>
Closes#15538 from mallman/spark-17993-fix_parquet_log_redirection.
## What changes were proposed in this pull request?
This is a follow-up work of #15618.
Close file source;
For any newly created streaming context outside the withContext, explicitly close the context.
## How was this patch tested?
Existing unit tests.
Author: wm624@hotmail.com <wm624@hotmail.com>
Closes#15818 from wangmiao1981/rtest.
## What changes were proposed in this pull request?
~In `TypedAggregateExpression.evaluateExpression`, we may create `ReferenceToExpressions` with `CreateStruct`, and `CreateStruct` may generate too many codes and split them into several methods. `ReferenceToExpressions` will replace `BoundReference` in `CreateStruct` with `LambdaVariable`, which can only be used as local variables and doesn't work if we split the generated code.~
It's already fixed by #15693 , this pr adds regression test
## How was this patch tested?
new test in `DatasetAggregatorSuite`
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15807 from cloud-fan/typed-agg.
## What changes were proposed in this pull request?
Currently we use java serialization for the WAL that stores the offsets contained in each batch. This has two main issues:
It can break across spark releases (though this is not the only thing preventing us from upgrading a running query)
It is unnecessarily opaque to the user.
I'd propose we require offsets to provide a user readable serialization and use that instead. JSON is probably a good option.
## How was this patch tested?
Tests were added for KafkaSourceOffset in [KafkaSourceOffsetSuite](external/kafka-0-10-sql/src/test/scala/org/apache/spark/sql/kafka010/KafkaSourceOffsetSuite.scala) and for LongOffset in [OffsetSuite](sql/core/src/test/scala/org/apache/spark/sql/streaming/OffsetSuite.scala)
Please review https://cwiki.apache.org/confluence/display/SPARK/Contributing+to+Spark before opening a pull request.
zsxwing marmbrus
Author: Tyson Condie <tcondie@gmail.com>
Author: Tyson Condie <tcondie@clash.local>
Closes#15626 from tcondie/spark-8360.
## What changes were proposed in this pull request?
`InsertIntoHadoopFsRelationCommand` does not keep track if it inserts into a table and what table it inserts to. This can make debugging these statements problematic. This PR adds table information the `InsertIntoHadoopFsRelationCommand`. Explaining this SQL command `insert into prq select * from range(0, 100000)` now yields the following executed plan:
```
== Physical Plan ==
ExecutedCommand
+- InsertIntoHadoopFsRelationCommand file:/dev/assembly/spark-warehouse/prq, ParquetFormat, <function1>, Map(serialization.format -> 1, path -> file:/dev/assembly/spark-warehouse/prq), Append, CatalogTable(
Table: `default`.`prq`
Owner: hvanhovell
Created: Wed Nov 09 17:42:30 CET 2016
Last Access: Thu Jan 01 01:00:00 CET 1970
Type: MANAGED
Schema: [StructField(id,LongType,true)]
Provider: parquet
Properties: [transient_lastDdlTime=1478709750]
Storage(Location: file:/dev/assembly/spark-warehouse/prq, InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat, OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat, Serde: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe, Properties: [serialization.format=1]))
+- Project [id#7L]
+- Range (0, 100000, step=1, splits=None)
```
## How was this patch tested?
Added extra checks to the `ParquetMetastoreSuite`
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#15832 from hvanhovell/SPARK-18370.
## What changes were proposed in this pull request?
This makes the result value both transient and lazy, so that if the RegExpReplace object is initialized then serialized, `result: StringBuffer` will be correctly initialized.
## How was this patch tested?
* Verified that this patch fixed the query that found the bug.
* Added a test case that fails without the fix.
Author: Ryan Blue <blue@apache.org>
Closes#15834 from rdblue/SPARK-18368-fix-regexp-replace.
## What changes were proposed in this pull request?
Test case initialization order under Maven and SBT are different. Maven always creates instances of all test cases and then run them all together.
This fails `ObjectHashAggregateSuite` because the randomized test cases there register a temporary Hive function right before creating a test case, and can be cleared while initializing other successive test cases. In SBT, this is fine since the created test case is executed immediately after creating the temporary function.
To fix this issue, we should put initialization/destruction code into `beforeAll()` and `afterAll()`.
## How was this patch tested?
Existing tests.
Author: Cheng Lian <lian@databricks.com>
Closes#15802 from liancheng/fix-flaky-object-hash-agg-suite.
## What changes were proposed in this pull request?
`LogicalPlanToSQLSuite` uses the following command to update the existing answer files.
```bash
SPARK_GENERATE_GOLDEN_FILES=1 build/sbt "hive/test-only *LogicalPlanToSQLSuite"
```
However, after introducing `getTestResourcePath`, it fails to update the previous golden answer files in the predefined directory. This issue aims to fix that.
## How was this patch tested?
It's a testsuite update. Manual.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#15789 from dongjoon-hyun/SPARK-18292.
### What changes were proposed in this pull request?
`Partitioned View` is not supported by SPARK SQL. For Hive partitioned view, SHOW CREATE TABLE is unable to generate the right DDL. Thus, SHOW CREATE TABLE should not support it like the other Hive-only features. This PR is to issue an exception when detecting the view is a partitioned view.
### How was this patch tested?
Added a test case
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15233 from gatorsmile/partitionedView.
## What changes were proposed in this pull request?
This makes the result value both transient and lazy, so that if the RegExpReplace object is initialized then serialized, `result: StringBuffer` will be correctly initialized.
## How was this patch tested?
* Verified that this patch fixed the query that found the bug.
* Added a test case that fails without the fix.
Author: Ryan Blue <blue@apache.org>
Closes#15816 from rdblue/SPARK-18368-fix-regexp-replace.
## What changes were proposed in this pull request?
These are no longer needed after https://issues.apache.org/jira/browse/SPARK-17183
cc cloud-fan
## How was this patch tested?
Existing parquet and orc tests.
Author: Eric Liang <ekl@databricks.com>
Closes#15799 from ericl/sc-4929.
## What changes were proposed in this pull request?
If the rename operation in the state store fails (`fs.rename` returns `false`), the StateStore should throw an exception and have the task retry. Currently if renames fail, nothing happens during execution immediately. However, you will observe that snapshot operations will fail, and then any attempt at recovery (executor failure / checkpoint recovery) also fails.
## How was this patch tested?
Unit test
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#15804 from brkyvz/rename-state.
## What changes were proposed in this pull request?
This PR port RDD API to use commit protocol, the changes made here:
1. Add new internal helper class that saves an RDD using a Hadoop OutputFormat named `SparkNewHadoopWriter`, it's similar with `SparkHadoopWriter` but uses commit protocol. This class supports the newer `mapreduce` API, instead of the old `mapred` API which is supported by `SparkHadoopWriter`;
2. Rewrite `PairRDDFunctions.saveAsNewAPIHadoopDataset` function, so it uses commit protocol now.
## How was this patch tested?
Exsiting test cases.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#15769 from jiangxb1987/rdd-commit.
## What changes were proposed in this pull request?
a follow up of https://github.com/apache/spark/pull/15688
## How was this patch tested?
updated test in `DDLSuite`
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15805 from cloud-fan/truncate.
## What changes were proposed in this pull request?
We generate bitmasks for grouping sets during the parsing process, and use these during analysis. These bitmasks are difficult to work with in practice and have lead to numerous bugs. This PR removes these and use actual sets instead, however we still need to generate these offsets for the grouping_id.
This PR does the following works:
1. Replace bitmasks by actual grouping sets durning Parsing/Analysis stage of CUBE/ROLLUP/GROUPING SETS;
2. Add new testsuite `ResolveGroupingAnalyticsSuite` to test the `Analyzer.ResolveGroupingAnalytics` rule directly;
3. Fix a minor bug in `ResolveGroupingAnalytics`.
## How was this patch tested?
By existing test cases, and add new testsuite `ResolveGroupingAnalyticsSuite` to test directly.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#15484 from jiangxb1987/group-set.
## What changes were proposed in this pull request?
In RewriteDistinctAggregates rewrite funtion,after the UDAF's childs are mapped to AttributeRefference, If the UDAF(such as ApproximatePercentile) has a foldable TypeCheck for the input, It will failed because the AttributeRefference is not foldable,then the UDAF is not resolved, and then nullify on the unresolved object will throw a Exception.
In this PR, only map Unfoldable child to AttributeRefference, this can avoid the UDAF's foldable TypeCheck. and then only Expand Unfoldable child, there is no need to Expand a static value(foldable value).
**Before sql result**
> select percentile_approxy(key,0.99999),count(distinct key),sume(distinc key) from src limit 1
> org.apache.spark.sql.catalyst.analysis.UnresolvedException: Invalid call to dataType on unresolved object, tree: 'percentile_approx(CAST(src.`key` AS DOUBLE), CAST(0.99999BD AS DOUBLE), 10000)
> at org.apache.spark.sql.catalyst.analysis.UnresolvedAttribute.dataType(unresolved.scala:92)
> at org.apache.spark.sql.catalyst.optimizer.RewriteDistinctAggregates$.org$apache$spark$sql$catalyst$optimizer$RewriteDistinctAggregates$$nullify(RewriteDistinctAggregates.scala:261)
**After sql result**
> select percentile_approxy(key,0.99999),count(distinct key),sume(distinc key) from src limit 1
> [498.0,309,79136]
## How was this patch tested?
Add a test case in HiveUDFSuit.
Author: root <root@iZbp1gsnrlfzjxh82cz80vZ.(none)>
Closes#15668 from windpiger/RewriteDistinctUDAFUnresolveExcep.
### What changes were proposed in this pull request?
Based on the discussion in [SPARK-18209](https://issues.apache.org/jira/browse/SPARK-18209). It doesn't really make sense to create permanent views based on temporary views or temporary UDFs.
To disallow the supports and issue the exceptions, this PR needs to detect whether a temporary view/UDF is being used when defining a permanent view. Basically, this PR can be split to two sub-tasks:
**Task 1:** detecting a temporary view from the query plan of view definition.
When finding an unresolved temporary view, Analyzer replaces it by a `SubqueryAlias` with the corresponding logical plan, which is stored in an in-memory HashMap. After replacement, it is impossible to detect whether the `SubqueryAlias` is added/generated from a temporary view. Thus, to detect the usage of a temporary view in view definition, this PR traverses the unresolved logical plan and uses the name of an `UnresolvedRelation` to detect whether it is a (global) temporary view.
**Task 2:** detecting a temporary UDF from the query plan of view definition.
Detecting usage of a temporary UDF in view definition is not straightfoward.
First, in the analyzed plan, we are having different forms to represent the functions. More importantly, some classes (e.g., `HiveGenericUDF`) are not accessible from `CreateViewCommand`, which is part of `sql/core`. Thus, we used the unanalyzed plan `child` of `CreateViewCommand` to detect the usage of a temporary UDF. Because the plan has already been successfully analyzed, we can assume the functions have been defined/registered.
Second, in Spark, the functions have four forms: Spark built-in functions, built-in hash functions, permanent UDFs and temporary UDFs. We do not have any direct way to determine whether a function is temporary or not. Thus, we introduced a function `isTemporaryFunction` in `SessionCatalog`. This function contains the detailed logics to determine whether a function is temporary or not.
### How was this patch tested?
Added test cases.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15764 from gatorsmile/blockTempFromPermViewCreation.
## What changes were proposed in this pull request?
Right now, there is no way to join the output of a memory sink with any table:
> UnsupportedOperationException: LeafNode MemoryPlan must implement statistics
This patch adds statistics to MemorySink, making joining snapshots of memory streams with tables possible.
## How was this patch tested?
Added a test case.
Author: Liwei Lin <lwlin7@gmail.com>
Closes#15786 from lw-lin/memory-sink-stat.
## What changes were proposed in this pull request?
This adds support for Hive variables:
* Makes values set via `spark-sql --hivevar name=value` accessible
* Adds `getHiveVar` and `setHiveVar` to the `HiveClient` interface
* Adds a SessionVariables trait for sessions like Hive that support variables (including Hive vars)
* Adds SessionVariables support to variable substitution
* Adds SessionVariables support to the SET command
## How was this patch tested?
* Adds a test to all supported Hive versions for accessing Hive variables
* Adds HiveVariableSubstitutionSuite
Author: Ryan Blue <blue@apache.org>
Closes#15738 from rdblue/SPARK-18086-add-hivevar-support.
## What changes were proposed in this pull request?
This PR proposes to match up the behaviour of `to_json` to `from_json` function for null-safety.
Currently, it throws `NullPointException` but this PR fixes this to produce `null` instead.
with the data below:
```scala
import spark.implicits._
val df = Seq(Some(Tuple1(Tuple1(1))), None).toDF("a")
df.show()
```
```
+----+
| a|
+----+
| [1]|
|null|
+----+
```
the codes below
```scala
import org.apache.spark.sql.functions._
df.select(to_json($"a")).show()
```
produces..
**Before**
throws `NullPointException` as below:
```
java.lang.NullPointerException
at org.apache.spark.sql.catalyst.json.JacksonGenerator.org$apache$spark$sql$catalyst$json$JacksonGenerator$$writeFields(JacksonGenerator.scala:138)
at org.apache.spark.sql.catalyst.json.JacksonGenerator$$anonfun$write$1.apply$mcV$sp(JacksonGenerator.scala:194)
at org.apache.spark.sql.catalyst.json.JacksonGenerator.org$apache$spark$sql$catalyst$json$JacksonGenerator$$writeObject(JacksonGenerator.scala:131)
at org.apache.spark.sql.catalyst.json.JacksonGenerator.write(JacksonGenerator.scala:193)
at org.apache.spark.sql.catalyst.expressions.StructToJson.eval(jsonExpressions.scala:544)
at org.apache.spark.sql.catalyst.expressions.Alias.eval(namedExpressions.scala:142)
at org.apache.spark.sql.catalyst.expressions.InterpretedProjection.apply(Projection.scala:48)
at org.apache.spark.sql.catalyst.expressions.InterpretedProjection.apply(Projection.scala:30)
at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
```
**After**
```
+---------------+
|structtojson(a)|
+---------------+
| {"_1":1}|
| null|
+---------------+
```
## How was this patch tested?
Unit test in `JsonExpressionsSuite.scala` and `JsonFunctionsSuite.scala`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15792 from HyukjinKwon/SPARK-18295.
## What changes were proposed in this pull request?
When profiling heap dumps from the HistoryServer and live Spark web UIs, I found a large amount of memory being wasted on duplicated objects and strings. This patch's changes remove most of this duplication, resulting in over 40% memory savings for some benchmarks.
- **Task metrics** (6441f0624dfcda9c7193a64bfb416a145b5aabdf): previously, every `TaskUIData` object would have its own instances of `InputMetricsUIData`, `OutputMetricsUIData`, `ShuffleReadMetrics`, and `ShuffleWriteMetrics`, but for many tasks these metrics are irrelevant because they're all zero. This patch changes how we construct these metrics in order to re-use a single immutable "empty" value for the cases where these metrics are empty.
- **TaskInfo.accumulables** (ade86db901127bf13c0e0bdc3f09c933a093bb76): Previously, every `TaskInfo` object had its own empty `ListBuffer` for holding updates from named accumulators. Tasks which didn't use named accumulators still paid for the cost of allocating and storing this empty buffer. To avoid this overhead, I changed the `val` with a mutable buffer into a `var` which holds an immutable Scala list, allowing tasks which do not have named accumulator updates to share the same singleton `Nil` object.
- **String.intern() in JSONProtocol** (7e05630e9a78c455db8c8c499f0590c864624e05): in the HistoryServer, executor hostnames and ids are deserialized from JSON, leading to massive duplication of these string objects. By calling `String.intern()` on the deserialized values we can remove all of this duplication. Since Spark now requires Java 7+ we don't have to worry about string interning exhausting the permgen (see http://java-performance.info/string-intern-in-java-6-7-8/).
## How was this patch tested?
I ran
```
sc.parallelize(1 to 100000, 100000).count()
```
in `spark-shell` with event logging enabled, then loaded that event log in the HistoryServer, performed a full GC, and took a heap dump. According to YourKit, the changes in this patch reduced memory consumption by roughly 28 megabytes (or 770k Java objects):
Here's a table illustrating the drop in objects due to deduplication (the drop is <100k for some objects because some events were dropped from the listener bus; this is a separate, existing bug that I'll address separately after CPU-profiling):
Author: Josh Rosen <joshrosen@databricks.com>
Closes#15743 from JoshRosen/spark-ui-memory-usage.
## What changes were proposed in this pull request?
Add a function to check if two integers are compatible when invoking `acceptsType()` in `DataType`.
## How was this patch tested?
Manually.
E.g.
```
spark.sql("create table t3(a map<bigint, array<string>>)")
spark.sql("select * from t3 where a[1] is not null")
```
Before:
```
cannot resolve 't.`a`[1]' due to data type mismatch: argument 2 requires bigint type, however, '1' is of int type.; line 1 pos 22
org.apache.spark.sql.AnalysisException: cannot resolve 't.`a`[1]' due to data type mismatch: argument 2 requires bigint type, however, '1' is of int type.; line 1 pos 22
at org.apache.spark.sql.catalyst.analysis.package$AnalysisErrorAt.failAnalysis(package.scala:42)
at org.apache.spark.sql.catalyst.analysis.CheckAnalysis$$anonfun$checkAnalysis$1$$anonfun$apply$2.applyOrElse(CheckAnalysis.scala:82)
at org.apache.spark.sql.catalyst.analysis.CheckAnalysis$$anonfun$checkAnalysis$1$$anonfun$apply$2.applyOrElse(CheckAnalysis.scala:74)
at org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$transformUp$1.apply(TreeNode.scala:307)
```
After:
Run the sql queries above. No errors.
Author: Weiqing Yang <yangweiqing001@gmail.com>
Closes#15448 from weiqingy/SPARK_17108.
## What changes were proposed in this pull request?
As reported in the jira, sometimes the generated java code in codegen will cause compilation error.
Code snippet to test it:
case class Route(src: String, dest: String, cost: Int)
case class GroupedRoutes(src: String, dest: String, routes: Seq[Route])
val ds = sc.parallelize(Array(
Route("a", "b", 1),
Route("a", "b", 2),
Route("a", "c", 2),
Route("a", "d", 10),
Route("b", "a", 1),
Route("b", "a", 5),
Route("b", "c", 6))
).toDF.as[Route]
val grped = ds.map(r => GroupedRoutes(r.src, r.dest, Seq(r)))
.groupByKey(r => (r.src, r.dest))
.reduceGroups { (g1: GroupedRoutes, g2: GroupedRoutes) =>
GroupedRoutes(g1.src, g1.dest, g1.routes ++ g2.routes)
}.map(_._2)
The problem here is, in `ReferenceToExpressions` we evaluate the children vars to local variables. Then the result expression is evaluated to use those children variables. In the above case, the result expression code is too long and will be split by `CodegenContext.splitExpression`. So those local variables cannot be accessed and cause compilation error.
## How was this patch tested?
Jenkins tests.
Please review https://cwiki.apache.org/confluence/display/SPARK/Contributing+to+Spark before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#15693 from viirya/fix-codege-compilation-error.
### What changes were proposed in this pull request?
Currently, the Hive built-in `hash` function is not being used in Spark since Spark 2.0. The public interface does not allow users to unregister the Spark built-in functions. Thus, users will never use Hive's built-in `hash` function.
The only exception here is `TestHiveFunctionRegistry`, which allows users to unregister the built-in functions. Thus, we can load Hive's hash function in the test cases. If we disable it, 10+ test cases will fail because the results are different from the Hive golden answer files.
This PR is to remove `hash` from the list of `hiveFunctions` in `HiveSessionCatalog`. It will also remove `TestHiveFunctionRegistry`. This removal makes us easier to remove `TestHiveSessionState` in the future.
### How was this patch tested?
N/A
Author: gatorsmile <gatorsmile@gmail.com>
Closes#14498 from gatorsmile/removeHash.
## What changes were proposed in this pull request?
We have an undocumented naming convention to call expression unit tests ExpressionsSuite, and the end-to-end tests FunctionsSuite. It'd be great to make all test suites consistent with this naming convention.
## How was this patch tested?
This is a test-only naming change.
Author: Reynold Xin <rxin@databricks.com>
Closes#15793 from rxin/SPARK-18296.
## What changes were proposed in this pull request?
Previously `TRUNCATE TABLE ... PARTITION` will always truncate the whole table for data source tables, this PR fixes it and improve `InMemoryCatalog` to make this command work with it.
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15688 from cloud-fan/truncate.
## What changes were proposed in this pull request?
Currently, there are the three cases when reading CSV by datasource when it is `PERMISSIVE` parse mode.
- schema == parsed tokens (from each line)
No problem to cast the value in the tokens to the field in the schema as they are equal.
- schema < parsed tokens (from each line)
It slices the tokens into the number of fields in schema.
- schema > parsed tokens (from each line)
It appends `null` into parsed tokens so that safely values can be casted with the schema.
However, when `null` is appended in the third case, we should take `null` into account when casting the values.
In case of `StringType`, it is fine as `UTF8String.fromString(datum)` produces `null` when the input is `null`. Therefore, this case will happen only when schema is explicitly given and schema includes data types that are not `StringType`.
The codes below:
```scala
val path = "/tmp/a"
Seq("1").toDF().write.text(path.getAbsolutePath)
val schema = StructType(
StructField("a", IntegerType, true) ::
StructField("b", IntegerType, true) :: Nil)
spark.read.schema(schema).option("header", "false").csv(path).show()
```
prints
**Before**
```
java.lang.NumberFormatException: null
at java.lang.Integer.parseInt(Integer.java:542)
at java.lang.Integer.parseInt(Integer.java:615)
at scala.collection.immutable.StringLike$class.toInt(StringLike.scala:272)
at scala.collection.immutable.StringOps.toInt(StringOps.scala:29)
at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$.castTo(CSVInferSchema.scala:24)
```
**After**
```
+---+----+
| a| b|
+---+----+
| 1|null|
+---+----+
```
## How was this patch tested?
Unit test in `CSVSuite.scala` and `CSVTypeCastSuite.scala`
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15767 from HyukjinKwon/SPARK-18269.
## What changes were proposed in this pull request?
This PR proposes `rand`/`randn` accept `null` as input in Scala/SQL and `LongType` as input in SQL. In this case, it treats the values as `0`.
So, this PR includes both changes below:
- `null` support
It seems MySQL also accepts this.
``` sql
mysql> select rand(0);
+---------------------+
| rand(0) |
+---------------------+
| 0.15522042769493574 |
+---------------------+
1 row in set (0.00 sec)
mysql> select rand(NULL);
+---------------------+
| rand(NULL) |
+---------------------+
| 0.15522042769493574 |
+---------------------+
1 row in set (0.00 sec)
```
and also Hive does according to [HIVE-14694](https://issues.apache.org/jira/browse/HIVE-14694)
So the codes below:
``` scala
spark.range(1).selectExpr("rand(null)").show()
```
prints..
**Before**
```
Input argument to rand must be an integer literal.;; line 1 pos 0
org.apache.spark.sql.AnalysisException: Input argument to rand must be an integer literal.;; line 1 pos 0
at org.apache.spark.sql.catalyst.analysis.FunctionRegistry$$anonfun$5.apply(FunctionRegistry.scala:465)
at org.apache.spark.sql.catalyst.analysis.FunctionRegistry$$anonfun$5.apply(FunctionRegistry.scala:444)
```
**After**
```
+-----------------------+
|rand(CAST(NULL AS INT))|
+-----------------------+
| 0.13385709732307427|
+-----------------------+
```
- `LongType` support in SQL.
In addition, it make the function allows to take `LongType` consistently within Scala/SQL.
In more details, the codes below:
``` scala
spark.range(1).select(rand(1), rand(1L)).show()
spark.range(1).selectExpr("rand(1)", "rand(1L)").show()
```
prints..
**Before**
```
+------------------+------------------+
| rand(1)| rand(1)|
+------------------+------------------+
|0.2630967864682161|0.2630967864682161|
+------------------+------------------+
Input argument to rand must be an integer literal.;; line 1 pos 0
org.apache.spark.sql.AnalysisException: Input argument to rand must be an integer literal.;; line 1 pos 0
at org.apache.spark.sql.catalyst.analysis.FunctionRegistry$$anonfun$5.apply(FunctionRegistry.scala:465)
at
```
**After**
```
+------------------+------------------+
| rand(1)| rand(1)|
+------------------+------------------+
|0.2630967864682161|0.2630967864682161|
+------------------+------------------+
+------------------+------------------+
| rand(1)| rand(1)|
+------------------+------------------+
|0.2630967864682161|0.2630967864682161|
+------------------+------------------+
```
## How was this patch tested?
Unit tests in `DataFrameSuite.scala` and `RandomSuite.scala`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15432 from HyukjinKwon/SPARK-17854.
## What changes were proposed in this pull request?
Prior this pr, the following code would cause an NPE:
`case class point(a:String, b:String, c:String, d: Int)`
`val data = Seq(
point("1","2","3", 1),
point("4","5","6", 1),
point("7","8","9", 1)
)`
`sc.parallelize(data).toDF().registerTempTable("table")`
`spark.sql("select a, b, c, count(d) from table group by a, b, c GROUPING SETS ((a)) ").show()`
The reason is that when the grouping_id() behavior was changed in #10677, some code (which should be changed) was left out.
Take the above code for example, prior #10677, the bit mask for set "(a)" was `001`, while after #10677 the bit mask was changed to `011`. However, the `nonNullBitmask` was not changed accordingly.
This pr will fix this problem.
## How was this patch tested?
add integration tests
Author: wangyang <wangyang@haizhi.com>
Closes#15416 from yangw1234/groupingid.
## What changes were proposed in this pull request?
This PR proposes to fix
```diff
test("FileStreamSink - json") {
- testFormat(Some("text"))
+ testFormat(Some("json"))
}
```
`text` is being tested above
```
test("FileStreamSink - text") {
testFormat(Some("text"))
}
```
## How was this patch tested?
Fixed test in `FileStreamSinkSuite.scala`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15785 from HyukjinKwon/SPARK-18192.
## What changes were proposed in this pull request?
As the title suggests, this patch moves hash expressions from misc.scala into hash.scala, to make it easier to find the hash functions. I wanted to do this a while ago but decided to wait for the branch-2.1 cut so the chance of conflicts will be smaller.
## How was this patch tested?
Test cases were also moved out of MiscFunctionsSuite into HashExpressionsSuite.
Author: Reynold Xin <rxin@databricks.com>
Closes#15784 from rxin/SPARK-18287.
## What changes were proposed in this pull request?
For data source tables, we will put its table schema, partition columns, etc. to table properties, to work around some hive metastore issues, e.g. not case-preserving, bad decimal type support, etc.
We should also do this for hive serde tables, to reduce the difference between hive serde tables and data source tables, e.g. column names should be case preserving.
## How was this patch tested?
existing tests, and a new test in `HiveExternalCatalog`
Author: Wenchen Fan <wenchen@databricks.com>
Closes#14750 from cloud-fan/minor1.
## What changes were proposed in this pull request?
`from_json` is currently not safe against `null` rows. This PR adds a fix and a regression test for it.
## How was this patch tested?
Regression test
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#15771 from brkyvz/json_fix.
## What changes were proposed in this pull request?
It seems the proximate cause of the test failures is that `cast(str as decimal)` in derby will raise an exception instead of returning NULL. This is a problem since Hive sometimes inserts `__HIVE_DEFAULT_PARTITION__` entries into the partition table as documented here: https://github.com/apache/hive/blob/trunk/metastore/src/java/org/apache/hadoop/hive/metastore/MetaStoreDirectSql.java#L1034
Basically, when these special default partitions are present, partition pruning pushdown using the SQL-direct mode will fail due this cast exception. As commented on in `MetaStoreDirectSql.java` above, this is normally fine since Hive falls back to JDO pruning, however when the pruning predicate contains an unsupported operator such as `>`, that will fail as well.
The only remaining question is why this behavior is nondeterministic. We know that when the test flakes, retries do not help, therefore the cause must be environmental. The current best hypothesis is that some config is different between different jenkins runs, which is why this PR prints out the Spark SQL and Hive confs for the test. The hope is that by comparing the config state for failure vs success we can isolate the root cause of the flakiness.
**Update:** we could not isolate the issue. It does not seem to be due to configuration differences. As such, I'm going to enable the non-flaky parts of the test since we are fairly confident these issues only occur with Derby (which is not used in production).
## How was this patch tested?
N/A
Author: Eric Liang <ekl@databricks.com>
Closes#15725 from ericl/print-confs-out.
## What changes were proposed in this pull request?
The `PushDownPredicate` rule can create a wrong result if we try to push a filter containing a predicate subquery through a project when the subquery and the project share attributes (have the same source).
The current PR fixes this by making sure that we do not push down when there is a predicate subquery that outputs the same attributes as the filters new child plan.
## How was this patch tested?
Added a test to `SubquerySuite`. nsyca has done previous work this. I have taken test from his initial PR.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#15761 from hvanhovell/SPARK-17337.
## What changes were proposed in this pull request?
`QueryExecution.toString` currently captures `java.lang.Throwable`s; this is far from a best practice and can lead to confusing situation or invalid application states. This PR fixes this by only capturing `AnalysisException`s.
## How was this patch tested?
Added a `QueryExecutionSuite`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#15760 from hvanhovell/SPARK-18259.
## What changes were proposed in this pull request?
This patch improves error reporting for FileStressSuite, when there is an error in Spark itself (not user code). This works by simply tightening the exception verification, and gets rid of the unnecessary thread for starting the stream.
Also renamed the class FileStreamStressSuite to make it more obvious it is a streaming suite.
## How was this patch tested?
This is a test only change and I manually verified error reporting by injecting some bug in the addBatch code for FileStreamSink.
Author: Reynold Xin <rxin@databricks.com>
Closes#15757 from rxin/SPARK-18257.
hive.exec.stagingdir have no effect in spark2.0.1，
Hive confs in hive-site.xml will be loaded in `hadoopConf`, so we should use `hadoopConf` in `InsertIntoHiveTable` instead of `SessionState.conf`
Author: 福星 <fuxing@wacai.com>
Closes#15744 from ClassNotFoundExp/master.
## What changes were proposed in this pull request?
This patch renames partitionProviderIsHive to tracksPartitionsInCatalog, as the old name was too Hive specific.
## How was this patch tested?
Should be covered by existing tests.
Author: Reynold Xin <rxin@databricks.com>
Closes#15750 from rxin/SPARK-18244.
## What changes were proposed in this pull request?
This PR adds a new hash-based aggregate operator named `ObjectHashAggregateExec` that supports `TypedImperativeAggregate`, which may use arbitrary Java objects as aggregation states. Please refer to the [design doc](https://issues.apache.org/jira/secure/attachment/12834260/%5BDesign%20Doc%5D%20Support%20for%20Arbitrary%20Aggregation%20States.pdf) attached in [SPARK-17949](https://issues.apache.org/jira/browse/SPARK-17949) for more details about it.
The major benefit of this operator is better performance when evaluating `TypedImperativeAggregate` functions, especially when there are relatively few distinct groups. Functions like Hive UDAFs, `collect_list`, and `collect_set` may also benefit from this after being migrated to `TypedImperativeAggregate`.
The following feature flag is introduced to enable or disable the new aggregate operator:
- Name: `spark.sql.execution.useObjectHashAggregateExec`
- Default value: `true`
We can also configure the fallback threshold using the following SQL operation:
- Name: `spark.sql.objectHashAggregate.sortBased.fallbackThreshold`
- Default value: 128
Fallback to sort-based aggregation when more than 128 distinct groups are accumulated in the aggregation hash map. This number is intentionally made small to avoid GC problems since aggregation buffers of this operator may contain arbitrary Java objects.
This may be improved by implementing size tracking for this operator, but that can be done in a separate PR.
Code generation and size tracking are planned to be implemented in follow-up PRs.
## Benchmark results
### `ObjectHashAggregateExec` vs `SortAggregateExec`
The first benchmark compares `ObjectHashAggregateExec` and `SortAggregateExec` by evaluating `typed_count`, a testing `TypedImperativeAggregate` version of the SQL `count` function.
```
Java HotSpot(TM) 64-Bit Server VM 1.8.0_92-b14 on Mac OS X 10.10.5
Intel(R) Core(TM) i7-4960HQ CPU 2.60GHz
object agg v.s. sort agg: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
sort agg w/ group by 31251 / 31908 3.4 298.0 1.0X
object agg w/ group by w/o fallback 6903 / 7141 15.2 65.8 4.5X
object agg w/ group by w/ fallback 20945 / 21613 5.0 199.7 1.5X
sort agg w/o group by 4734 / 5463 22.1 45.2 6.6X
object agg w/o group by w/o fallback 4310 / 4529 24.3 41.1 7.3X
```
The next benchmark compares `ObjectHashAggregateExec` and `SortAggregateExec` by evaluating the Spark native version of `percentile_approx`.
Note that `percentile_approx` is so heavy an aggregate function that the bottleneck of the benchmark is evaluating the aggregate function itself rather than the aggregate operator since I couldn't run a large scale benchmark on my laptop. That's why the results are so close and looks counter-intuitive (aggregation with grouping is even faster than that aggregation without grouping).
```
Java HotSpot(TM) 64-Bit Server VM 1.8.0_92-b14 on Mac OS X 10.10.5
Intel(R) Core(TM) i7-4960HQ CPU 2.60GHz
object agg v.s. sort agg: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
sort agg w/ group by 3418 / 3530 0.6 1630.0 1.0X
object agg w/ group by w/o fallback 3210 / 3314 0.7 1530.7 1.1X
object agg w/ group by w/ fallback 3419 / 3511 0.6 1630.1 1.0X
sort agg w/o group by 4336 / 4499 0.5 2067.3 0.8X
object agg w/o group by w/o fallback 4271 / 4372 0.5 2036.7 0.8X
```
### Hive UDAF vs Spark AF
This benchmark compares the following two kinds of aggregate functions:
- "hive udaf": Hive implementation of `percentile_approx`, without partial aggregation supports, evaluated using `SortAggregateExec`.
- "spark af": Spark native implementation of `percentile_approx`, with partial aggregation support, evaluated using `ObjectHashAggregateExec`
The performance differences are mostly due to faster implementation and partial aggregation support in the Spark native version of `percentile_approx`.
This benchmark basically shows the performance differences between the worst case, where an aggregate function without partial aggregation support is evaluated using `SortAggregateExec`, and the best case, where a `TypedImperativeAggregate` with partial aggregation support is evaluated using `ObjectHashAggregateExec`.
```
Java HotSpot(TM) 64-Bit Server VM 1.8.0_92-b14 on Mac OS X 10.10.5
Intel(R) Core(TM) i7-4960HQ CPU 2.60GHz
hive udaf vs spark af: Best/Avg Time(ms) Rate(M/s) Per Row(ns) Relative
------------------------------------------------------------------------------------------------
hive udaf w/o group by 5326 / 5408 0.0 81264.2 1.0X
spark af w/o group by 93 / 111 0.7 1415.6 57.4X
hive udaf w/ group by 3804 / 3946 0.0 58050.1 1.4X
spark af w/ group by w/o fallback 71 / 90 0.9 1085.7 74.8X
spark af w/ group by w/ fallback 98 / 111 0.7 1501.6 54.1X
```
### Real world benchmark
We also did a relatively large benchmark using a real world query involving `percentile_approx`:
- Hive UDAF implementation, sort-based aggregation, w/o partial aggregation support
24.77 minutes
- Native implementation, sort-based aggregation, w/ partial aggregation support
4.64 minutes
- Native implementation, object hash aggregator, w/ partial aggregation support
1.80 minutes
## How was this patch tested?
New unit tests and randomized test cases are added in `ObjectAggregateFunctionSuite`.
Author: Cheng Lian <lian@databricks.com>
Closes#15590 from liancheng/obj-hash-agg.
### What changes were proposed in this pull request?
When `FilterExec` contains `isNotNull`, which could be inferred and pushed down or users specified, we convert the nullability of the involved columns if the top-layer expression is null-intolerant. However, this is not correct, if the top-layer expression is not a leaf expression, it could still tolerate the null when it has null-tolerant child expressions.
For example, `cast(coalesce(a#5, a#15) as double)`. Although `cast` is a null-intolerant expression, but obviously`coalesce` is null-tolerant. Thus, it could eat null.
When the nullability is wrong, we could generate incorrect results in different cases. For example,
``` Scala
val df1 = Seq((1, 2), (2, 3)).toDF("a", "b")
val df2 = Seq((2, 5), (3, 4)).toDF("a", "c")
val joinedDf = df1.join(df2, Seq("a"), "outer").na.fill(0)
val df3 = Seq((3, 1)).toDF("a", "d")
joinedDf.join(df3, "a").show
```
The optimized plan is like
```
Project [a#29, b#30, c#31, d#42]
+- Join Inner, (a#29 = a#41)
:- Project [cast(coalesce(cast(coalesce(a#5, a#15) as double), 0.0) as int) AS a#29, cast(coalesce(cast(b#6 as double), 0.0) as int) AS b#30, cast(coalesce(cast(c#16 as double), 0.0) as int) AS c#31]
: +- Filter isnotnull(cast(coalesce(cast(coalesce(a#5, a#15) as double), 0.0) as int))
: +- Join FullOuter, (a#5 = a#15)
: :- LocalRelation [a#5, b#6]
: +- LocalRelation [a#15, c#16]
+- LocalRelation [a#41, d#42]
```
Without the fix, it returns an empty result. With the fix, it can return a correct answer:
```
+---+---+---+---+
| a| b| c| d|
+---+---+---+---+
| 3| 0| 4| 1|
+---+---+---+---+
```
### How was this patch tested?
Added test cases to verify the nullability changes in FilterExec. Also added a test case for verifying the reported incorrect result.
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15523 from gatorsmile/nullabilityFilterExec.
## What changes were proposed in this pull request?
I was reading this part of the code and was really confused by the "partition" parameter. This patch adds some documentation for it to reduce confusion in the future.
I also looked around other logical plans but most of them are either already documented, or pretty self-evident to people that know Spark SQL.
## How was this patch tested?
N/A - doc change only.
Author: Reynold Xin <rxin@databricks.com>
Closes#15749 from rxin/doc-improvement.
## What changes were proposed in this pull request?
This patch moves the new commit protocol API from sql/core to core module, so we can use it in the future in the RDD API.
As part of this patch, I also moved the speficiation of the random uuid for the write path out of the commit protocol, and instead pass in a job id.
## How was this patch tested?
N/A
Author: Reynold Xin <rxin@databricks.com>
Closes#15731 from rxin/SPARK-18219.
## What changes were proposed in this pull request?
In Spark 1.6 and earlier, we can drop the database we are using. In Spark 2.0, native implementation prevent us from dropping current database, which may break some old queries. This PR would re-enable the feature.
## How was this patch tested?
one new unit test in `SessionCatalogSuite`.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#15011 from adrian-wang/dropcurrent.
### What changes were proposed in this pull request?
So far, we have limited test case coverage about implicit type casting. We need to draw a matrix to find all the possible casting pairs.
- Reorged the existing test cases
- Added all the possible type casting pairs
- Drawed a matrix to show the implicit type casting. The table is very wide. Maybe hard to review. Thus, you also can access the same table via the link to [a google sheet](https://docs.google.com/spreadsheets/d/19PS4ikrs-Yye_mfu-rmIKYGnNe-NmOTt5DDT1fOD3pI/edit?usp=sharing).
SourceType\CastToType | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | BinaryType | BooleanType | StringType | DateType | TimestampType | ArrayType | MapType | StructType | NullType | CalendarIntervalType | DecimalType | NumericType | IntegralType
------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | ------------ | -----------
**ByteType** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | X | X | StringType | X | X | X | X | X | X | X | DecimalType(3, 0) | ByteType | ByteType
**ShortType** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | X | X | StringType | X | X | X | X | X | X | X | DecimalType(5, 0) | ShortType | ShortType
**IntegerType** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | X | X | StringType | X | X | X | X | X | X | X | DecimalType(10, 0) | IntegerType | IntegerType
**LongType** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | X | X | StringType | X | X | X | X | X | X | X | DecimalType(20, 0) | LongType | LongType
**DoubleType** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | X | X | StringType | X | X | X | X | X | X | X | DecimalType(30, 15) | DoubleType | IntegerType
**FloatType** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | X | X | StringType | X | X | X | X | X | X | X | DecimalType(14, 7) | FloatType | IntegerType
**Dec(10, 2)** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | X | X | StringType | X | X | X | X | X | X | X | DecimalType(10, 2) | Dec(10, 2) | IntegerType
**BinaryType** | X | X | X | X | X | X | X | BinaryType | X | StringType | X | X | X | X | X | X | X | X | X | X
**BooleanType** | X | X | X | X | X | X | X | X | BooleanType | StringType | X | X | X | X | X | X | X | X | X | X
**StringType** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | BinaryType | X | StringType | DateType | TimestampType | X | X | X | X | X | DecimalType(38, 18) | DoubleType | X
**DateType** | X | X | X | X | X | X | X | X | X | StringType | DateType | TimestampType | X | X | X | X | X | X | X | X
**TimestampType** | X | X | X | X | X | X | X | X | X | StringType | DateType | TimestampType | X | X | X | X | X | X | X | X
**ArrayType** | X | X | X | X | X | X | X | X | X | X | X | X | ArrayType* | X | X | X | X | X | X | X
**MapType** | X | X | X | X | X | X | X | X | X | X | X | X | X | MapType* | X | X | X | X | X | X
**StructType** | X | X | X | X | X | X | X | X | X | X | X | X | X | X | StructType* | X | X | X | X | X
**NullType** | ByteType | ShortType | IntegerType | LongType | DoubleType | FloatType | Dec(10, 2) | BinaryType | BooleanType | StringType | DateType | TimestampType | ArrayType | MapType | StructType | NullType | CalendarIntervalType | DecimalType(38, 18) | DoubleType | IntegerType
**CalendarIntervalType** | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | CalendarIntervalType | X | X | X
Note: ArrayType\*, MapType\*, StructType\* are castable only when the internal child types also match; otherwise, not castable
### How was this patch tested?
N/A
Author: gatorsmile <gatorsmile@gmail.com>
Closes#15691 from gatorsmile/implicitTypeCasting.
## What changes were proposed in this pull request?
This PR proposes to change the documentation for functions. Please refer the discussion from https://github.com/apache/spark/pull/15513
The changes include
- Re-indent the documentation
- Add examples/arguments in `extended` where the arguments are multiple or specific format (e.g. xml/ json).
For examples, the documentation was updated as below:
### Functions with single line usage
**Before**
- `pow`
``` sql
Usage: pow(x1, x2) - Raise x1 to the power of x2.
Extended Usage:
> SELECT pow(2, 3);
8.0
```
- `current_timestamp`
``` sql
Usage: current_timestamp() - Returns the current timestamp at the start of query evaluation.
Extended Usage:
No example for current_timestamp.
```
**After**
- `pow`
``` sql
Usage: pow(expr1, expr2) - Raises `expr1` to the power of `expr2`.
Extended Usage:
Examples:
> SELECT pow(2, 3);
8.0
```
- `current_timestamp`
``` sql
Usage: current_timestamp() - Returns the current timestamp at the start of query evaluation.
Extended Usage:
No example/argument for current_timestamp.
```
### Functions with (already) multiple line usage
**Before**
- `approx_count_distinct`
``` sql
Usage: approx_count_distinct(expr) - Returns the estimated cardinality by HyperLogLog++.
approx_count_distinct(expr, relativeSD=0.05) - Returns the estimated cardinality by HyperLogLog++
with relativeSD, the maximum estimation error allowed.
Extended Usage:
No example for approx_count_distinct.
```
- `percentile_approx`
``` sql
Usage:
percentile_approx(col, percentage [, accuracy]) - Returns the approximate percentile value of numeric
column `col` at the given percentage. The value of percentage must be between 0.0
and 1.0. The `accuracy` parameter (default: 10000) is a positive integer literal which
controls approximation accuracy at the cost of memory. Higher value of `accuracy` yields
better accuracy, `1.0/accuracy` is the relative error of the approximation.
percentile_approx(col, array(percentage1 [, percentage2]...) [, accuracy]) - Returns the approximate
percentile array of column `col` at the given percentage array. Each value of the
percentage array must be between 0.0 and 1.0. The `accuracy` parameter (default: 10000) is
a positive integer literal which controls approximation accuracy at the cost of memory.
Higher value of `accuracy` yields better accuracy, `1.0/accuracy` is the relative error of
the approximation.
Extended Usage:
No example for percentile_approx.
```
**After**
- `approx_count_distinct`
``` sql
Usage:
approx_count_distinct(expr[, relativeSD]) - Returns the estimated cardinality by HyperLogLog++.
`relativeSD` defines the maximum estimation error allowed.
Extended Usage:
No example/argument for approx_count_distinct.
```
- `percentile_approx`
``` sql
Usage:
percentile_approx(col, percentage [, accuracy]) - Returns the approximate percentile value of numeric
column `col` at the given percentage. The value of percentage must be between 0.0
and 1.0. The `accuracy` parameter (default: 10000) is a positive numeric literal which
controls approximation accuracy at the cost of memory. Higher value of `accuracy` yields
better accuracy, `1.0/accuracy` is the relative error of the approximation.
When `percentage` is an array, each value of the percentage array must be between 0.0 and 1.0.
In this case, returns the approximate percentile array of column `col` at the given
percentage array.
Extended Usage:
Examples:
> SELECT percentile_approx(10.0, array(0.5, 0.4, 0.1), 100);
[10.0,10.0,10.0]
> SELECT percentile_approx(10.0, 0.5, 100);
10.0
```
## How was this patch tested?
Manually tested
**When examples are multiple**
``` sql
spark-sql> describe function extended reflect;
Function: reflect
Class: org.apache.spark.sql.catalyst.expressions.CallMethodViaReflection
Usage: reflect(class, method[, arg1[, arg2 ..]]) - Calls a method with reflection.
Extended Usage:
Examples:
> SELECT reflect('java.util.UUID', 'randomUUID');
c33fb387-8500-4bfa-81d2-6e0e3e930df2
> SELECT reflect('java.util.UUID', 'fromString', 'a5cf6c42-0c85-418f-af6c-3e4e5b1328f2');
a5cf6c42-0c85-418f-af6c-3e4e5b1328f2
```
**When `Usage` is in single line**
``` sql
spark-sql> describe function extended min;
Function: min
Class: org.apache.spark.sql.catalyst.expressions.aggregate.Min
Usage: min(expr) - Returns the minimum value of `expr`.
Extended Usage:
No example/argument for min.
```
**When `Usage` is already in multiple lines**
``` sql
spark-sql> describe function extended percentile_approx;
Function: percentile_approx
Class: org.apache.spark.sql.catalyst.expressions.aggregate.ApproximatePercentile
Usage:
percentile_approx(col, percentage [, accuracy]) - Returns the approximate percentile value of numeric
column `col` at the given percentage. The value of percentage must be between 0.0
and 1.0. The `accuracy` parameter (default: 10000) is a positive numeric literal which
controls approximation accuracy at the cost of memory. Higher value of `accuracy` yields
better accuracy, `1.0/accuracy` is the relative error of the approximation.
When `percentage` is an array, each value of the percentage array must be between 0.0 and 1.0.
In this case, returns the approximate percentile array of column `col` at the given
percentage array.
Extended Usage:
Examples:
> SELECT percentile_approx(10.0, array(0.5, 0.4, 0.1), 100);
[10.0,10.0,10.0]
> SELECT percentile_approx(10.0, 0.5, 100);
10.0
```
**When example/argument is missing**
``` sql
spark-sql> describe function extended rank;
Function: rank
Class: org.apache.spark.sql.catalyst.expressions.Rank
Usage:
rank() - Computes the rank of a value in a group of values. The result is one plus the number
of rows preceding or equal to the current row in the ordering of the partition. The values
will produce gaps in the sequence.
Extended Usage:
No example/argument for rank.
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15677 from HyukjinKwon/SPARK-17963-1.
## What changes were proposed in this pull request?
Due to a limitation of hive metastore(table location must be directory path, not file path), we always store `path` for data source table in storage properties, instead of the `locationUri` field. However, we should not expose this difference to `CatalogTable` level, but just treat it as a hack in `HiveExternalCatalog`, like we store table schema of data source table in table properties.
This PR unifies `path` and `locationUri` outside of `HiveExternalCatalog`, both data source table and hive serde table should use the `locationUri` field.
This PR also unifies the way we handle default table location for managed table. Previously, the default table location of hive serde managed table is set by external catalog, but the one of data source table is set by command. After this PR, we follow the hive way and the default table location is always set by external catalog.
For managed non-file-based tables, we will assign a default table location and create an empty directory for it, the table location will be removed when the table is dropped. This is reasonable as metastore doesn't care about whether a table is file-based or not, and an empty table directory has no harm.
For external non-file-based tables, ideally we can omit the table location, but due to a hive metastore issue, we will assign a random location to it, and remove it right after the table is created. See SPARK-15269 for more details. This is fine as it's well isolated in `HiveExternalCatalog`.
To keep the existing behaviour of the `path` option, in this PR we always add the `locationUri` to storage properties using key `path`, before passing storage properties to `DataSource` as data source options.
## How was this patch tested?
existing tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15024 from cloud-fan/path.
## What changes were proposed in this pull request?
RuntimeReplaceable is used to create aliases for expressions, but the way it deals with type coercion is pretty weird (each expression is responsible for how to handle type coercion, which does not obey the normal implicit type cast rules).
This patch simplifies its handling by allowing the analyzer to traverse into the actual expression of a RuntimeReplaceable.
## How was this patch tested?
- Correctness should be guaranteed by existing unit tests already
- Removed SQLCompatibilityFunctionSuite and moved it sql-compatibility-functions.sql
- Added a new test case in sql-compatibility-functions.sql for verifying explain behavior.
Author: Reynold Xin <rxin@databricks.com>
Closes#15723 from rxin/SPARK-18214.
## What changes were proposed in this pull request?
When a user appended a column using a "nondeterministic" function to a DataFrame, e.g., `rand`, `randn`, and `monotonically_increasing_id`, the expected semantic is the following:
- The value in each row should remain unchanged, as if we materialize the column immediately, regardless of later DataFrame operations.
However, since we use `TaskContext.getPartitionId` to get the partition index from the current thread, the values from nondeterministic columns might change if we call `union` or `coalesce` after. `TaskContext.getPartitionId` returns the partition index of the current Spark task, which might not be the corresponding partition index of the DataFrame where we defined the column.
See the unit tests below or JIRA for examples.
This PR uses the partition index from `RDD.mapPartitionWithIndex` instead of `TaskContext` and fixes the partition initialization logic in whole-stage codegen, normal codegen, and codegen fallback. `initializeStatesForPartition(partitionIndex: Int)` was added to `Projection`, `Nondeterministic`, and `Predicate` (codegen) and initialized right after object creation in `mapPartitionWithIndex`. `newPredicate` now returns a `Predicate` instance rather than a function for proper initialization.
## How was this patch tested?
Unit tests. (Actually I'm not very confident that this PR fixed all issues without introducing new ones ...)
cc: rxin davies
Author: Xiangrui Meng <meng@databricks.com>
Closes#15567 from mengxr/SPARK-14393.
## What changes were proposed in this pull request?
This pr is to add pattern-matching entries for array data in `Literal.apply`.
## How was this patch tested?
Added tests in `LiteralExpressionSuite`.
Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>
Closes#15257 from maropu/SPARK-17683.
## What changes were proposed in this pull request?
Simplify struct creation, especially the aspect of `CleanupAliases` which missed some aliases when handling trees created by `CreateStruct`.
This PR includes:
1. A failing test (create struct with nested aliases, some of the aliases survive `CleanupAliases`).
2. A fix that transforms `CreateStruct` into a `CreateNamedStruct` constructor, effectively eliminating `CreateStruct` from all expression trees.
3. A `NamePlaceHolder` used by `CreateStruct` when column names cannot be extracted from unresolved `NamedExpression`.
4. A new Analyzer rule that resolves `NamePlaceHolder` into a string literal once the `NamedExpression` is resolved.
5. `CleanupAliases` code was simplified as it no longer has to deal with `CreateStruct`'s top level columns.
## How was this patch tested?
Running all tests-suits in package org.apache.spark.sql, especially including the analysis suite, making sure added test initially fails, after applying suggested fix rerun the entire analysis package successfully.
Modified few tests that expected `CreateStruct` which is now transformed into `CreateNamedStruct`.
Author: eyal farago <eyal farago>
Author: Herman van Hovell <hvanhovell@databricks.com>
Author: eyal farago <eyal.farago@gmail.com>
Author: Eyal Farago <eyal.farago@actimize.com>
Author: Hyukjin Kwon <gurwls223@gmail.com>
Author: eyalfa <eyal.farago@gmail.com>
Closes#15718 from hvanhovell/SPARK-16839-2.
## What changes were proposed in this pull request?
Fix `Locale.US` for all usages of `DateFormat`, `NumberFormat`
## How was this patch tested?
Existing tests.
Author: Sean Owen <sowen@cloudera.com>
Closes#15610 from srowen/SPARK-18076.
## What changes were proposed in this pull request?
The PR fixes the bug that the QueryStartedEvent is not logged
the postToAll() in the original code is actually calling StreamingQueryListenerBus.postToAll() which has no listener at all....we shall post by sparkListenerBus.postToAll(s) and this.postToAll() to trigger local listeners as well as the listeners registered in LiveListenerBus
zsxwing
## How was this patch tested?
The following snapshot shows that QueryStartedEvent has been logged correctly
Author: CodingCat <zhunansjtu@gmail.com>
Closes#15675 from CodingCat/SPARK-18144.
## What changes were proposed in this pull request?
This patch adds support for all file formats in structured streaming sinks. This is actually a very small change thanks to all the previous refactoring done using the new internal commit protocol API.
## How was this patch tested?
Updated FileStreamSinkSuite to add test cases for json, text, and parquet.
Author: Reynold Xin <rxin@databricks.com>
Closes#15711 from rxin/SPARK-18192.
## What changes were proposed in this pull request?
There are a couple issues with the current 2.1 behavior when inserting into Datasource tables with partitions managed by Hive.
(1) OVERWRITE TABLE ... PARTITION will actually overwrite the entire table instead of just the specified partition.
(2) INSERT|OVERWRITE does not work with partitions that have custom locations.
This PR fixes both of these issues for Datasource tables managed by Hive. The behavior for legacy tables or when `manageFilesourcePartitions = false` is unchanged.
There is one other issue in that INSERT OVERWRITE with dynamic partitions will overwrite the entire table instead of just the updated partitions, but this behavior is pretty complicated to implement for Datasource tables. We should address that in a future release.
## How was this patch tested?
Unit tests.
Author: Eric Liang <ekl@databricks.com>
Closes#15705 from ericl/sc-4942.
## What changes were proposed in this pull request?
When the metadata logs for various parts of Structured Streaming are stored on non-HDFS filesystems such as NFS or ext4, the HDFSMetadataLog class leaves hidden HDFS-style checksum (CRC) files in the log directory, one file per batch. This PR modifies HDFSMetadataLog so that it detects the use of a filesystem that doesn't use CRC files and removes the CRC files.
## How was this patch tested?
Modified an existing test case in HDFSMetadataLogSuite to check whether HDFSMetadataLog correctly removes CRC files on the local POSIX filesystem. Ran the entire regression suite.
Author: frreiss <frreiss@us.ibm.com>
Closes#15027 from frreiss/fred-17475.
(Link to Jira issue: https://issues.apache.org/jira/browse/SPARK-17992)
## What changes were proposed in this pull request?
We recently added table partition pruning for partitioned Hive tables converted to using `TableFileCatalog`. When the Hive configuration option `hive.metastore.try.direct.sql` is set to `false`, Hive will throw an exception for unsupported filter expressions. For example, attempting to filter on an integer partition column will throw a `org.apache.hadoop.hive.metastore.api.MetaException`.
I discovered this behavior because VideoAmp uses the CDH version of Hive with a Postgresql metastore DB. In this configuration, CDH sets `hive.metastore.try.direct.sql` to `false` by default, and queries that filter on a non-string partition column will fail.
Rather than throw an exception in query planning, this patch catches this exception, logs a warning and returns all table partitions instead. Clients of this method are already expected to handle the possibility that the filters will not be honored.
## How was this patch tested?
A unit test was added.
Author: Michael Allman <michael@videoamp.com>
Closes#15673 from mallman/spark-17992-catch_hive_partition_filter_exception.
## What changes were proposed in this pull request?
Column.expr is private[sql], but it's an actually really useful field to have for debugging. We should open it up, similar to how we use QueryExecution.
## How was this patch tested?
N/A - this is a simple visibility change.
Author: Reynold Xin <rxin@databricks.com>
Closes#15724 from rxin/SPARK-18216.
## What changes were proposed in this pull request?
This patch adds a new commit protocol implementation ManifestFileCommitProtocol that follows the existing streaming flow, and uses it in FileStreamSink to consolidate the write path in structured streaming with the batch mode write path.
This deletes a lot of code, and would make it trivial to support other functionalities that are currently available in batch but not in streaming, including all file formats and bucketing.
## How was this patch tested?
Should be covered by existing tests.
Author: Reynold Xin <rxin@databricks.com>
Closes#15710 from rxin/SPARK-18025.
In SPARK-4761 / #3621 (December 2014) we enabled Kryo serialization by default in the Spark Thrift Server. However, I don't think that the original rationale for doing this still holds now that most Spark SQL serialization is now performed via encoders and our UnsafeRow format.
In addition, the use of Kryo as the default serializer can introduce performance problems because the creation of new KryoSerializer instances is expensive and we haven't performed instance-reuse optimizations in several code paths (including DirectTaskResult deserialization).
Given all of this, I propose to revert back to using JavaSerializer as the default serializer in the Thrift Server.
/cc liancheng
Author: Josh Rosen <joshrosen@databricks.com>
Closes#14906 from JoshRosen/disable-kryo-in-thriftserver.
## What changes were proposed in this pull request?
This PR proposes to add `to_json` function in contrast with `from_json` in Scala, Java and Python.
It'd be useful if we can convert a same column from/to json. Also, some datasources do not support nested types. If we are forced to save a dataframe into those data sources, we might be able to work around by this function.
The usage is as below:
``` scala
val df = Seq(Tuple1(Tuple1(1))).toDF("a")
df.select(to_json($"a").as("json")).show()
```
``` bash
+--------+
| json|
+--------+
|{"_1":1}|
+--------+
```
## How was this patch tested?
Unit tests in `JsonFunctionsSuite` and `JsonExpressionsSuite`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#15354 from HyukjinKwon/SPARK-17764.
We now know it's a persistent environmental issue that is causing this test to sometimes fail. One hypothesis is that some configuration is leaked from another suite, and depending on suite ordering this can cause this test to fail.
I am planning on mining the jenkins logs to try to narrow down which suite could be causing this. For now, disable the test.
Author: Eric Liang <ekl@databricks.com>
Closes#15720 from ericl/disable-flaky-test.
## What changes were proposed in this pull request?
Aggregation Without Window/GroupBy expressions will fail in `checkAnalysis`, the error message is a bit misleading, we should generate a more specific error message for this case.
For example,
```
spark.read.load("/some-data")
.withColumn("date_dt", to_date($"date"))
.withColumn("year", year($"date_dt"))
.withColumn("week", weekofyear($"date_dt"))
.withColumn("user_count", count($"userId"))
.withColumn("daily_max_in_week", max($"user_count").over(weeklyWindow))
)
```
creates the following output:
```
org.apache.spark.sql.AnalysisException: expression '`randomColumn`' is neither present in the group by, nor is it an aggregate function. Add to group by or wrap in first() (or first_value) if you don't care which value you get.;
```
In the error message above, `randomColumn` doesn't appear in the query(acturally it's added by function `withColumn`), so the message is not enough for the user to address the problem.
## How was this patch tested?
Manually test
Before:
```
scala> spark.sql("select col, count(col) from tbl")
org.apache.spark.sql.AnalysisException: expression 'tbl.`col`' is neither present in the group by, nor is it an aggregate function. Add to group by or wrap in first() (or first_value) if you don't care which value you get.;;
```
After:
```
scala> spark.sql("select col, count(col) from tbl")
org.apache.spark.sql.AnalysisException: grouping expressions sequence is empty, and 'tbl.`col`' is not an aggregate function. Wrap '(count(col#231L) AS count(col)#239L)' in windowing function(s) or wrap 'tbl.`col`' in first() (or first_value) if you don't care which value you get.;;
```
Also add new test sqls in `group-by.sql`.
Author: jiangxingbo <jiangxb1987@gmail.com>
Closes#15672 from jiangxb1987/groupBy-empty.
## What changes were proposed in this pull request?
Likewise [DataSet.scala](https://github.com/apache/spark/blob/master/sql/core/src/main/scala/org/apache/spark/sql/Dataset.scala#L156) KeyValueGroupedDataset should mark the queryExecution as transient.
As mentioned in the Jira ticket, without transient we saw serialization issues like
```
Caused by: java.io.NotSerializableException: org.apache.spark.sql.execution.QueryExecution
Serialization stack:
- object not serializable (class: org.apache.spark.sql.execution.QueryExecution, value: ==
```
## How was this patch tested?
Run the query which is specified in the Jira ticket before and after:
```
val a = spark.createDataFrame(sc.parallelize(Seq((1,2),(3,4)))).as[(Int,Int)]
val grouped = a.groupByKey(
{x:(Int,Int)=>x._1}
)
val mappedGroups = grouped.mapGroups((k,x)=>
{(k,1)}
)
val yyy = sc.broadcast(1)
val last = mappedGroups.rdd.map(xx=>
{ val simpley = yyy.value 1 }
)
```
Author: Ergin Seyfe <eseyfe@fb.com>
Closes#15706 from seyfe/keyvaluegrouped_serialization.
## What changes were proposed in this pull request?
This is a follow-up to https://github.com/apache/spark/pull/15634.
## How was this patch tested?
N/A
Author: Liwei Lin <lwlin7@gmail.com>
Closes#15712 from lw-lin/18103.
## What changes were proposed in this pull request?
Simplify struct creation, especially the aspect of `CleanupAliases` which missed some aliases when handling trees created by `CreateStruct`.
This PR includes:
1. A failing test (create struct with nested aliases, some of the aliases survive `CleanupAliases`).
2. A fix that transforms `CreateStruct` into a `CreateNamedStruct` constructor, effectively eliminating `CreateStruct` from all expression trees.
3. A `NamePlaceHolder` used by `CreateStruct` when column names cannot be extracted from unresolved `NamedExpression`.
4. A new Analyzer rule that resolves `NamePlaceHolder` into a string literal once the `NamedExpression` is resolved.
5. `CleanupAliases` code was simplified as it no longer has to deal with `CreateStruct`'s top level columns.
## How was this patch tested?
running all tests-suits in package org.apache.spark.sql, especially including the analysis suite, making sure added test initially fails, after applying suggested fix rerun the entire analysis package successfully.
modified few tests that expected `CreateStruct` which is now transformed into `CreateNamedStruct`.
Credit goes to hvanhovell for assisting with this PR.
Author: eyal farago <eyal farago>
Author: eyal farago <eyal.farago@gmail.com>
Author: Herman van Hovell <hvanhovell@databricks.com>
Author: Eyal Farago <eyal.farago@actimize.com>
Author: Hyukjin Kwon <gurwls223@gmail.com>
Author: eyalfa <eyal.farago@gmail.com>
Closes#14444 from eyalfa/SPARK-16839_redundant_aliases_after_cleanupAliases.
## What changes were proposed in this pull request?
Currently an unqualified `getFunction(..)`call returns a wrong result; the returned function is shown as temporary function without a database. For example:
```
scala> sql("create function fn1 as 'org.apache.hadoop.hive.ql.udf.generic.GenericUDFAbs'")
res0: org.apache.spark.sql.DataFrame = []
scala> spark.catalog.getFunction("fn1")
res1: org.apache.spark.sql.catalog.Function = Function[name='fn1', className='org.apache.hadoop.hive.ql.udf.generic.GenericUDFAbs', isTemporary='true']
```
This PR fixes this by adding database information to ExpressionInfo (which is used to store the function information).
## How was this patch tested?
Added more thorough tests to `CatalogSuite`.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#15542 from hvanhovell/SPARK-17996.
## What changes were proposed in this pull request?
When multiple records have the minimum value, the answer of ApproximatePercentile is wrong.
## How was this patch tested?
add a test case
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#15641 from wzhfy/percentile.
## What changes were proposed in this pull request?
As reported on the jira, insert overwrite statement runs much slower in Spark, compared with hive-client.
It seems there is a patch [HIVE-11940](ba21806b77) which largely improves insert overwrite performance on Hive. HIVE-11940 is patched after Hive 2.0.0.
Because Spark SQL uses older Hive library, we can not benefit from such improvement.
The reporter verified that there is also a big performance gap between Hive 1.2.1 (520.037 secs) and Hive 2.0.1 (35.975 secs) on insert overwrite execution.
Instead of upgrading to Hive 2.0 in Spark SQL, which might not be a trivial task, this patch provides an approach to delete the partition before asking Hive to load data files into the partition.
Note: The case reported on the jira is insert overwrite to partition. Since `Hive.loadTable` also uses the function to replace files, insert overwrite to table should has the same issue. We can take the same approach to delete the table first. I will upgrade this to include this.
## How was this patch tested?
Jenkins tests.
There are existing tests using insert overwrite statement. Those tests should be passed. I added a new test to specially test insert overwrite into partition.
For performance issue, as I don't have Hive 2.0 environment, this needs the reporter to verify it. Please refer to the jira.
Please review https://cwiki.apache.org/confluence/display/SPARK/Contributing+to+Spark before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#15667 from viirya/improve-hive-insertoverwrite.
## What changes were proposed in this pull request?
This patch introduces an internal commit protocol API that is used by the batch data source to do write commits. It currently has only one implementation that uses Hadoop MapReduce's OutputCommitter API. In the future, this commit API can be used to unify streaming and batch commits.
## How was this patch tested?
Should be covered by existing write tests.
Author: Reynold Xin <rxin@databricks.com>
Author: Eric Liang <ekl@databricks.com>
Closes#15707 from rxin/SPARK-18024-2.
## What changes were proposed in this pull request?
This will re-run the flaky test a few times after it fails. This will help determine if it's due to nondeterministic test setup, or because of some environment issue (e.g. leaked config from another test).
cc yhuai
Author: Eric Liang <ekl@databricks.com>
Closes#15708 from ericl/spark-18167-3.
## What changes were proposed in this pull request?
When inserting into datasource tables with partitions managed by the hive metastore, we need to notify the metastore of newly added partitions. Previously this was implemented via `msck repair table`, but this is more expensive than needed.
This optimizes the insertion path to add only the updated partitions.
## How was this patch tested?
Existing tests (I verified manually that tests fail if the repair operation is omitted).
Author: Eric Liang <ekl@databricks.com>
Closes#15633 from ericl/spark-18087.
## What changes were proposed in this pull request?
One possibility for this test flaking is that we have corrupted the partition schema somehow in the tests, which causes the cast to decimal to fail in the call. This should at least show us the actual partition values.
## How was this patch tested?
Run it locally, it prints out something like `ArrayBuffer(test(partcol=0), test(partcol=1), test(partcol=2), test(partcol=3), test(partcol=4))`.
Author: Eric Liang <ekl@databricks.com>
Closes#15701 from ericl/print-more-info.
## What changes were proposed in this pull request?
The test `when schema inference is turned on, should read partition data` should not delete files because the source maybe is listing files. This PR just removes the delete actions since they are not necessary.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#15699 from zsxwing/SPARK-18030.
## What changes were proposed in this pull request?
### Problem
Iterative ML code may easily create query plans that grow exponentially. We found that query planning time also increases exponentially even when all the sub-plan trees are cached.
The following snippet illustrates the problem:
``` scala
(0 until 6).foldLeft(Seq(1, 2, 3).toDS) { (plan, iteration) =>
println(s"== Iteration $iteration ==")
val time0 = System.currentTimeMillis()
val joined = plan.join(plan, "value").join(plan, "value").join(plan, "value").join(plan, "value")
joined.cache()
println(s"Query planning takes ${System.currentTimeMillis() - time0} ms")
joined.as[Int]
}
// == Iteration 0 ==
// Query planning takes 9 ms
// == Iteration 1 ==
// Query planning takes 26 ms
// == Iteration 2 ==
// Query planning takes 53 ms
// == Iteration 3 ==
// Query planning takes 163 ms
// == Iteration 4 ==
// Query planning takes 700 ms
// == Iteration 5 ==
// Query planning takes 3418 ms
```
This is because when building a new Dataset, the new plan is always built upon `QueryExecution.analyzed`, which doesn't leverage existing cached plans.
On the other hand, usually, doing caching every a few iterations may not be the right direction for this problem since caching is too memory consuming (imaging computing connected components over a graph with 50 billion nodes). What we really need here is to truncate both the query plan (to minimize query planning time) and the lineage of the underlying RDD (to avoid stack overflow).
### Changes introduced in this PR
This PR tries to fix this issue by introducing a `checkpoint()` method into `Dataset[T]`, which does exactly the things described above. The following snippet, which is essentially the same as the one above but invokes `checkpoint()` instead of `cache()`, shows the micro benchmark result of this PR:
One key point is that the checkpointed Dataset should preserve the origianl partitioning and ordering information of the original Dataset, so that we can avoid unnecessary shuffling (similar to reading from a pre-bucketed table). This is done by adding `outputPartitioning` and `outputOrdering` to `LogicalRDD` and `RDDScanExec`.
### Micro benchmark
``` scala
spark.sparkContext.setCheckpointDir("/tmp/cp")
(0 until 100).foldLeft(Seq(1, 2, 3).toDS) { (plan, iteration) =>
println(s"== Iteration $iteration ==")
val time0 = System.currentTimeMillis()
val cp = plan.checkpoint()
cp.count()
System.out.println(s"Checkpointing takes ${System.currentTimeMillis() - time0} ms")
val time1 = System.currentTimeMillis()
val joined = cp.join(cp, "value").join(cp, "value").join(cp, "value").join(cp, "value")
val result = joined.as[Int]
println(s"Query planning takes ${System.currentTimeMillis() - time1} ms")
result
}
// == Iteration 0 ==
// Checkpointing takes 591 ms
// Query planning takes 13 ms
// == Iteration 1 ==
// Checkpointing takes 1605 ms
// Query planning takes 16 ms
// == Iteration 2 ==
// Checkpointing takes 782 ms
// Query planning takes 8 ms
// == Iteration 3 ==
// Checkpointing takes 729 ms
// Query planning takes 10 ms
// == Iteration 4 ==
// Checkpointing takes 734 ms
// Query planning takes 9 ms
// == Iteration 5 ==
// ...
// == Iteration 50 ==
// Checkpointing takes 571 ms
// Query planning takes 7 ms
// == Iteration 51 ==
// Checkpointing takes 548 ms
// Query planning takes 7 ms
// == Iteration 52 ==
// Checkpointing takes 596 ms
// Query planning takes 8 ms
// == Iteration 53 ==
// Checkpointing takes 568 ms
// Query planning takes 7 ms
// ...
```
You may see that although checkpointing is more heavy weight an operation, it always takes roughly the same amount of time to perform both checkpointing and query planning.
### Open question
mengxr mentioned that it would be more convenient if we can make `Dataset.checkpoint()` eager, i.e., always performs a `RDD.count()` after calling `RDD.checkpoint()`. Not quite sure whether this is a universal requirement. Maybe we can add a `eager: Boolean` argument for `Dataset.checkpoint()` to support that.
## How was this patch tested?
Unit test added in `DatasetSuite`.
Author: Cheng Lian <lian@databricks.com>
Author: Yin Huai <yhuai@databricks.com>
Closes#15651 from liancheng/ds-checkpoint.
## What changes were proposed in this pull request?
Because of the refactoring work in Structured Streaming, the event logs generated by Strucutred Streaming in Spark 2.0.0 and 2.0.1 cannot be parsed.
This PR just ignores these logs in ReplayListenerBus because no places use them.
## How was this patch tested?
- Generated events logs using Spark 2.0.0 and 2.0.1, and saved them as `structured-streaming-query-event-logs-2.0.0.txt` and `structured-streaming-query-event-logs-2.0.1.txt`
- The new added test makes sure ReplayListenerBus will skip these bad jsons.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#15663 from zsxwing/fix-event-log.
## What changes were proposed in this pull request?
Currently, `ANALYZE TABLE` command accepts `identifier` for option `NOSCAN`. This PR raises a ParseException for unknown option.
**Before**
```scala
scala> sql("create table test(a int)")
res0: org.apache.spark.sql.DataFrame = []
scala> sql("analyze table test compute statistics blah")
res1: org.apache.spark.sql.DataFrame = []
```
**After**
```scala
scala> sql("create table test(a int)")
res0: org.apache.spark.sql.DataFrame = []
scala> sql("analyze table test compute statistics blah")
org.apache.spark.sql.catalyst.parser.ParseException:
Expected `NOSCAN` instead of `blah`(line 1, pos 0)
```
## How was this patch tested?
Pass the Jenkins test with a new test case.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#15640 from dongjoon-hyun/SPARK-18106.
## What changes were proposed in this pull request?
To reduce the number of components in SQL named *Catalog, rename *FileCatalog to *FileIndex. A FileIndex is responsible for returning the list of partitions / files to scan given a filtering expression.
```
TableFileCatalog => CatalogFileIndex
FileCatalog => FileIndex
ListingFileCatalog => InMemoryFileIndex
MetadataLogFileCatalog => MetadataLogFileIndex
PrunedTableFileCatalog => PrunedInMemoryFileIndex
```
cc yhuai marmbrus
## How was this patch tested?
N/A
Author: Eric Liang <ekl@databricks.com>
Author: Eric Liang <ekhliang@gmail.com>
Closes#15634 from ericl/rename-file-provider.
## What changes were proposed in this pull request?
The behavior of union is not well defined here. It is safer to explicitly execute these commands in order. The other use of `Union` in this way will be removed by https://github.com/apache/spark/pull/15633
## How was this patch tested?
Existing tests.
cc yhuai cloud-fan
Author: Eric Liang <ekhliang@gmail.com>
Author: Eric Liang <ekl@databricks.com>
Closes#15665 from ericl/spark-18146.
## What changes were proposed in this pull request?
org.apache.spark.sql.hive.execution.SQLQuerySuite is flaking when hive partition pruning is enabled.
Based on the stack traces, it seems to be an old issue where Hive fails to cast a numeric partition column ("Invalid character string format for type DECIMAL"). There are two possibilities here: either we are somehow corrupting the partition table to have non-decimal values in that column, or there is a transient issue with Derby.
This PR logs the result of the retry when this exception is encountered, so we can confirm what is going on.
## How was this patch tested?
n/a
cc yhuai
Author: Eric Liang <ekl@databricks.com>
Closes#15676 from ericl/spark-18167.
## What changes were proposed in this pull request?
Fixed the issue that ForeachSink didn't rethrow the exception.
## How was this patch tested?
The fixed unit test.
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#15674 from zsxwing/foreach-sink-error.
## What changes were proposed in this pull request?
Issue:
Querying on a global temp view throws Table or view not found exception.
Fix:
Update the lookupRelation in HiveSessionCatalog to check for global temp views similar to the SessionCatalog.lookupRelation.
Before fix:
Querying on a global temp view ( for. e.g.: select * from global_temp.v1) throws Table or view not found exception
After fix:
Query succeeds and returns the right result.
## How was this patch tested?
- Two unit tests are added to check for global temp view for the code path when hive support is enabled.
- Regression unit tests were run successfully. ( build/sbt -Phive hive/test, build/sbt sql/test, build/sbt catalyst/test)
Author: Sunitha Kambhampati <skambha@us.ibm.com>
Closes#15649 from skambha/lookuprelationChanges.
## What changes were proposed in this pull request?
We should follow hive table and also store partition spec in metastore for data source table.
This brings 2 benefits:
1. It's more flexible to manage the table data files, as users can use `ADD PARTITION`, `DROP PARTITION` and `RENAME PARTITION`
2. We don't need to cache all file status for data source table anymore.
## How was this patch tested?
existing tests.
Author: Eric Liang <ekl@databricks.com>
Author: Michael Allman <michael@videoamp.com>
Author: Eric Liang <ekhliang@gmail.com>
Author: Wenchen Fan <wenchen@databricks.com>
Closes#15515 from cloud-fan/partition.
## What changes were proposed in this pull request?
A follow up PR for #14553 to fix the flaky test. It's flaky because the file list API doesn't guarantee any order of the return list.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#15661 from zsxwing/fix-StreamingQuerySuite.
