Commit graph

1438 commits

Author SHA1 Message Date
Cheng Lian 83cdfd84f8 [SPARK-8508] [SQL] Ignores a test case to cleanup unnecessary testing output until #6882 is merged
Currently [the test case for SPARK-7862] [1] writes 100,000 lines of integer triples to stderr and makes Jenkins build output unnecessarily large and it's hard to debug other build errors. A proper fix is on the way in #6882. This PR ignores this test case temporarily until #6882 is merged.

[1]: https://github.com/apache/spark/pull/6404/files#diff-1ea02a6fab84e938582f7f87cc4d9ea1R641

Author: Cheng Lian <lian@databricks.com>

Closes #6925 from liancheng/spark-8508 and squashes the following commits:

41e5b47 [Cheng Lian] Ignores the test case until #6882 is merged
2015-06-21 13:20:28 -07:00
jeanlyn a1e3649c87 [SPARK-8379] [SQL] avoid speculative tasks write to the same file
The issue link [SPARK-8379](https://issues.apache.org/jira/browse/SPARK-8379)
Currently,when we insert data to the dynamic partition with speculative tasks we will get the Exception
```
org.apache.hadoop.ipc.RemoteException(org.apache.hadoop.hdfs.server.namenode.LeaseExpiredException):
Lease mismatch on /tmp/hive-jeanlyn/hive_2015-06-15_15-20-44_734_8801220787219172413-1/-ext-10000/ds=2015-06-15/type=2/part-00301.lzo
owned by DFSClient_attempt_201506031520_0011_m_000189_0_-1513487243_53
but is accessed by DFSClient_attempt_201506031520_0011_m_000042_0_-1275047721_57
```
This pr try to write the data to temporary dir when using dynamic parition  avoid the speculative tasks writing the same file

Author: jeanlyn <jeanlyn92@gmail.com>

Closes #6833 from jeanlyn/speculation and squashes the following commits:

64bbfab [jeanlyn] use FileOutputFormat.getTaskOutputPath to get the path
8860af0 [jeanlyn] remove the never using code
e19a3bd [jeanlyn] avoid speculative tasks write same file
2015-06-21 00:13:40 -07:00
Tarek Auel 41ab2853f4 [SPARK-8301] [SQL] Improve UTF8String substring/startsWith/endsWith/contains performance
Jira: https://issues.apache.org/jira/browse/SPARK-8301

Added the private method startsWith(prefix, offset) to implement startsWith, endsWith and contains without copying the array

I hope that the component SQL is still correct. I copied it from the Jira ticket.

Author: Tarek Auel <tarek.auel@googlemail.com>
Author: Tarek Auel <tarek.auel@gmail.com>

Closes #6804 from tarekauel/SPARK-8301 and squashes the following commits:

f5d6b9a [Tarek Auel] fixed parentheses and annotation
6d7b068 [Tarek Auel] [SPARK-8301] removed null checks
9ca0473 [Tarek Auel] [SPARK-8301] removed null checks
1c327eb [Tarek Auel] [SPARK-8301] removed new
9f17cc8 [Tarek Auel] [SPARK-8301] fixed conversion byte to string in codegen
3a0040f [Tarek Auel] [SPARK-8301] changed call of UTF8String.set to UTF8String.from
e4530d2 [Tarek Auel] [SPARK-8301] changed call of UTF8String.set to UTF8String.from
a5f853a [Tarek Auel] [SPARK-8301] changed visibility of set to protected. Changed annotation of bytes from Nullable to Nonnull
d2fb05f [Tarek Auel] [SPARK-8301] added additional null checks
79cb55b [Tarek Auel] [SPARK-8301] null check. Added test cases for null check.
b17909e [Tarek Auel] [SPARK-8301] removed unnecessary copying of UTF8String. Added a private function startsWith(prefix, offset) to implement the check for startsWith, endsWith and contains.
2015-06-20 20:03:59 -07:00
Andrew Or bec40e52be [HOTFIX] [SPARK-8489] Correct JIRA number in previous commit
It should be SPARK-8489, not SPARK-8498.
2015-06-19 17:39:26 -07:00
Andrew Or 093c34838d [SPARK-8498] [SQL] Add regression test for SPARK-8470
**Summary of the problem in SPARK-8470.** When using `HiveContext` to create a data frame of a user case class, Spark throws `scala.reflect.internal.MissingRequirementError` when it tries to infer the schema using reflection. This is caused by `HiveContext` silently overwriting the context class loader containing the user classes.

**What this issue is about.** This issue adds regression tests for SPARK-8470, which is already fixed in #6891. We closed SPARK-8470 as a duplicate because it is a different manifestation of the same problem in SPARK-8368. Due to the complexity of the reproduction, this requires us to pre-package a special test jar and include it in the Spark project itself.

I tested this with and without the fix in #6891 and verified that it passes only if the fix is present.

Author: Andrew Or <andrew@databricks.com>

Closes #6909 from andrewor14/SPARK-8498 and squashes the following commits:

5e9d688 [Andrew Or] Add regression test for SPARK-8470
2015-06-19 17:34:09 -07:00
Michael Armbrust a333a72e02 [SPARK-8420] [SQL] Fix comparision of timestamps/dates with strings
In earlier versions of Spark SQL we casted `TimestampType` and `DataType` to `StringType` when it was involved in a binary comparison with a `StringType`.  This allowed comparing a timestamp with a partial date as a user would expect.
 - `time > "2014-06-10"`
 - `time > "2014"`

In 1.4.0 we tried to cast the String instead into a Timestamp.  However, since partial dates are not a valid complete timestamp this results in `null` which results in the tuple being filtered.

This PR restores the earlier behavior.  Note that we still special case equality so that these comparisons are not affected by not printing zeros for subsecond precision.

Author: Michael Armbrust <michael@databricks.com>

Closes #6888 from marmbrus/timeCompareString and squashes the following commits:

bdef29c [Michael Armbrust] test partial date
1f09adf [Michael Armbrust] special handling of equality
1172c60 [Michael Armbrust] more test fixing
4dfc412 [Michael Armbrust] fix tests
aaa9508 [Michael Armbrust] newline
04d908f [Michael Armbrust] [SPARK-8420][SQL] Fix comparision of timestamps/dates with strings
2015-06-19 16:54:51 -07:00
Nathan Howell 9814b971f0 [SPARK-8093] [SQL] Remove empty structs inferred from JSON documents
Author: Nathan Howell <nhowell@godaddy.com>

Closes #6799 from NathanHowell/spark-8093 and squashes the following commits:

76ac3e8 [Nathan Howell] [SPARK-8093] [SQL] Remove empty structs inferred from JSON documents
2015-06-19 16:19:28 -07:00
Davies Liu e41e2fd6c6 [SPARK-8461] [SQL] fix codegen with REPL class loader
The ExecutorClassLoader for REPL will cause Janino failed to find class for those in java.lang, so switch to use default class loader for Janino, which will also help performance.

cc liancheng yhuai

Author: Davies Liu <davies@databricks.com>

Closes #6898 from davies/fix_class_loader and squashes the following commits:

24276d4 [Davies Liu] add regression test
4ff0457 [Davies Liu] address comment, refactor
7f5ffbe [Davies Liu] fix REPL class loader with codegen
2015-06-19 11:40:04 -07:00
Yin Huai c5876e529b [SPARK-8368] [SPARK-8058] [SQL] HiveContext may override the context class loader of the current thread
https://issues.apache.org/jira/browse/SPARK-8368

Also, I add tests according https://issues.apache.org/jira/browse/SPARK-8058.

Author: Yin Huai <yhuai@databricks.com>

Closes #6891 from yhuai/SPARK-8368 and squashes the following commits:

37bb3db [Yin Huai] Update test timeout and comment.
8762eec [Yin Huai] Style.
695cd2d [Yin Huai] Correctly set the class loader in the conf of the state in client wrapper.
b3378fe [Yin Huai] Failed tests.
2015-06-19 11:11:58 -07:00
Shilei 0c32fc125c [SPARK-8234][SQL] misc function: md5
Author: Shilei <shilei.qian@intel.com>

Closes #6779 from qiansl127/MD5 and squashes the following commits:

11fcdb2 [Shilei] Fix the indent
04bd27b [Shilei] Add codegen
da60eb3 [Shilei] Remove checkInputDataTypes function
9509ad0 [Shilei] Format code
12c61f4 [Shilei] Accept only BinaryType for Md5
1df0b5b [Shilei] format to scala type
60ccde1 [Shilei] Add more test case
b8c73b4 [Shilei] Rewrite the type check for Md5
c166167 [Shilei] Add md5 function
2015-06-19 10:49:27 -07:00
Liang-Chi Hsieh 2c59d5c12a [SPARK-8207] [SQL] Add math function bin
JIRA: https://issues.apache.org/jira/browse/SPARK-8207

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #6721 from viirya/expr_bin and squashes the following commits:

07e1c8f [Liang-Chi Hsieh] Remove AbstractUnaryMathExpression and let BIN inherit UnaryExpression.
0677f1a [Liang-Chi Hsieh] For comments.
cf62b95 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_bin
0cf20f2 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_bin
dea9c12 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_bin
d4f4774 [Liang-Chi Hsieh] Add @ignore_unicode_prefix.
7a0196f [Liang-Chi Hsieh] Fix python style.
ac2bacd [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_bin
a0a2d0f [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_bin
4cb764d [Liang-Chi Hsieh] For comments.
0f78682 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_bin
c0c3197 [Liang-Chi Hsieh] Add bin to FunctionRegistry.
824f761 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_bin
50e0c3b [Liang-Chi Hsieh] Add math function bin(a: long): string.
2015-06-19 10:09:31 -07:00
Yu ISHIKAWA 754929b153 [SPARK-8348][SQL] Add in operator to DataFrame Column
I have added it for only Scala.

TODO: we should also support `in` operator in Python.

Author: Yu ISHIKAWA <yuu.ishikawa@gmail.com>

Closes #6824 from yu-iskw/SPARK-8348 and squashes the following commits:

e76d02f [Yu ISHIKAWA] Not use infix notation
6f744ac [Yu ISHIKAWA] Fit the test cases because these used the old test data set.
00077d3 [Yu ISHIKAWA] [SPARK-8348][SQL] Add in operator to DataFrame Column
2015-06-18 23:13:05 -07:00
Cheng Lian a71cbbdea5 [SPARK-8458] [SQL] Don't strip scheme part of output path when writing ORC files
`Path.toUri.getPath` strips scheme part of output path (from `file:///foo` to `/foo`), which causes ORC data source only writes to the file system configured in Hadoop configuration. Should use `Path.toString` instead.

Author: Cheng Lian <lian@databricks.com>

Closes #6892 from liancheng/spark-8458 and squashes the following commits:

87f8199 [Cheng Lian] Don't strip scheme of output path when writing ORC files
2015-06-18 22:01:52 -07:00
Sandy Ryza 43f50decdd [SPARK-8135] Don't load defaults when reconstituting Hadoop Configurations
Author: Sandy Ryza <sandy@cloudera.com>

Closes #6679 from sryza/sandy-spark-8135 and squashes the following commits:

c5554ff [Sandy Ryza] SPARK-8135. In SerializableWritable, don't load defaults when instantiating Configuration
2015-06-18 19:36:05 -07:00
Reynold Xin dc41313899 [SPARK-8218][SQL] Binary log math function update.
Some minor updates based on after merging #6725.

Author: Reynold Xin <rxin@databricks.com>

Closes #6871 from rxin/log and squashes the following commits:

ab51542 [Reynold Xin] Use JVM log
76fc8de [Reynold Xin] Fixed arg.
a7c1522 [Reynold Xin] [SPARK-8218][SQL] Binary log math function update.
2015-06-18 18:41:15 -07:00
Josh Rosen 207a98ca59 [SPARK-8446] [SQL] Add helper functions for testing SparkPlan physical operators
This patch introduces `SparkPlanTest`, a base class for unit tests of SparkPlan physical operators.  This is analogous to Spark SQL's existing `QueryTest`, which does something similar for end-to-end tests with actual queries.

These helper methods provide nicer error output when tests fail and help developers to avoid writing lots of boilerplate in order to execute manually constructed physical plans.

Author: Josh Rosen <joshrosen@databricks.com>
Author: Josh Rosen <rosenville@gmail.com>
Author: Michael Armbrust <michael@databricks.com>

Closes #6885 from JoshRosen/spark-plan-test and squashes the following commits:

f8ce275 [Josh Rosen] Fix some IntelliJ inspections and delete some dead code
84214be [Josh Rosen] Add an extra column which isn't part of the sort
ae1896b [Josh Rosen] Provide implicits automatically
a80f9b0 [Josh Rosen] Merge pull request #4 from marmbrus/pr/6885
d9ab1e4 [Michael Armbrust] Add simple resolver
c60a44d [Josh Rosen] Manually bind references
996332a [Josh Rosen] Add types so that tests compile
a46144a [Josh Rosen] WIP
2015-06-18 16:45:14 -07:00
Liang-Chi Hsieh 31641128b3 [SPARK-8363][SQL] Move sqrt to math and extend UnaryMathExpression
JIRA: https://issues.apache.org/jira/browse/SPARK-8363

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #6823 from viirya/move_sqrt and squashes the following commits:

8977e11 [Liang-Chi Hsieh] Remove unnecessary old tests.
d23e79e [Liang-Chi Hsieh] Explicitly indicate sqrt value sequence.
699f48b [Liang-Chi Hsieh] Use correct @since tag.
8dff6d1 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into move_sqrt
bc2ed77 [Liang-Chi Hsieh] Remove/move arithmetic expression test and expression type checking test. Remove unnecessary Sqrt type rule.
d38492f [Liang-Chi Hsieh] Now sqrt accepts boolean because type casting is handled by HiveTypeCoercion.
297cc90 [Liang-Chi Hsieh] Sqrt only accepts double input.
ef4a21a [Liang-Chi Hsieh] Move sqrt to math.
2015-06-18 13:00:31 -07:00
Yijie Shen e86fbdb1e6 [SPARK-8283][SQL] Resolve udf_struct test failure in HiveCompatibilitySuite
This PR aimed to resolve udf_struct test failure in HiveCompatibilitySuite.

Currently, this is done by loosening CreateStruct's children type from NamedExpression to Expression and automatically generating StructField name for non-NamedExpression children.

The naming convention for unnamed children follows the udf's counterpart in Hive:
`col1, col2, col3, ...`

Author: Yijie Shen <henry.yijieshen@gmail.com>

Closes #6828 from yijieshen/SPARK-8283 and squashes the following commits:

6052b73 [Yijie Shen] Doc fix
677e0b7 [Yijie Shen] Resolve udf_struct test failure by automatically generate structField name for non-NamedExpression children
2015-06-17 23:46:57 -07:00
Liang-Chi Hsieh fee3438a32 [SPARK-8218][SQL] Add binary log math function
JIRA: https://issues.apache.org/jira/browse/SPARK-8218

Because there is already `log` unary function defined, the binary log function is called `logarithm` for now.

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #6725 from viirya/expr_binary_log and squashes the following commits:

bf96bd9 [Liang-Chi Hsieh] Compare log result in string.
102070d [Liang-Chi Hsieh] Round log result to better comparing in python test.
fd01863 [Liang-Chi Hsieh] For comments.
beed631 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_binary_log
6089d11 [Liang-Chi Hsieh] Remove unnecessary override.
8cf37b7 [Liang-Chi Hsieh] For comments.
bc89597 [Liang-Chi Hsieh] For comments.
db7dc38 [Liang-Chi Hsieh] Use ctor instead of companion object.
0634ef7 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_binary_log
1750034 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_binary_log
3d75bfc [Liang-Chi Hsieh] Fix scala style.
5b39c02 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_binary_log
23c54a3 [Liang-Chi Hsieh] Fix scala style.
ebc9929 [Liang-Chi Hsieh] Let Logarithm accept one parameter too.
605574d [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_binary_log
21c3bfd [Liang-Chi Hsieh] Fix scala style.
c6c187f [Liang-Chi Hsieh] For comments.
c795342 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into expr_binary_log
f373bac [Liang-Chi Hsieh] Add binary log expression.
2015-06-17 23:31:30 -07:00
zsxwing 78a430ea4d [SPARK-7961][SQL]Refactor SQLConf to display better error message
1. Add `SQLConfEntry` to store the information about a configuration. For those configurations that cannot be found in `sql-programming-guide.md`, I left the doc as `<TODO>`.
2. Verify the value when setting a configuration if this is in SQLConf.
3. Use `SET -v` to display all public configurations.

Author: zsxwing <zsxwing@gmail.com>

Closes #6747 from zsxwing/sqlconf and squashes the following commits:

7d09bad [zsxwing] Use SQLConfEntry in HiveContext
49f6213 [zsxwing] Add getConf, setConf to SQLContext and HiveContext
e014f53 [zsxwing] Merge branch 'master' into sqlconf
93dad8e [zsxwing] Fix the unit tests
cf950c1 [zsxwing] Fix the code style and tests
3c5f03e [zsxwing] Add unsetConf(SQLConfEntry) and fix the code style
a2f4add [zsxwing] getConf will return the default value if a config is not set
037b1db [zsxwing] Add schema to SetCommand
0520c3c [zsxwing] Merge branch 'master' into sqlconf
7afb0ec [zsxwing] Fix the configurations about HiveThriftServer
7e728e3 [zsxwing] Add doc for SQLConfEntry and fix 'toString'
5e95b10 [zsxwing] Add enumConf
c6ba76d [zsxwing] setRawString => setConfString, getRawString => getConfString
4abd807 [zsxwing] Fix the test for 'set -v'
6e47e56 [zsxwing] Fix the compilation error
8973ced [zsxwing] Remove floatConf
1fc3a8b [zsxwing] Remove the 'conf' command and use 'set -v' instead
99c9c16 [zsxwing] Fix tests that use SQLConfEntry as a string
88a03cc [zsxwing] Add new lines between confs and return types
ce7c6c8 [zsxwing] Remove seqConf
f3c1b33 [zsxwing] Refactor SQLConf to display better error message
2015-06-17 23:22:54 -07:00
Lianhui Wang 9db73ec124 [SPARK-8381][SQL]reuse typeConvert when convert Seq[Row] to catalyst type
reuse-typeConvert when convert Seq[Row] to CatalystType

Author: Lianhui Wang <lianhuiwang09@gmail.com>

Closes #6831 from lianhuiwang/reuse-typeConvert and squashes the following commits:

1fec395 [Lianhui Wang] remove CatalystTypeConverters.convertToCatalyst
714462d [Lianhui Wang] add package[sql]
9d1fbf3 [Lianhui Wang] address JoshRosen's comments
768956f [Lianhui Wang] update scala style
4498c62 [Lianhui Wang] reuse typeConvert
2015-06-17 22:52:47 -07:00
Punya Biswal d1069cba4a [SPARK-8397] [SQL] Allow custom configuration for TestHive
We encourage people to use TestHive in unit tests, because it's
impossible to create more than one HiveContext within one process. The
current implementation locks people into using a local[2] SparkContext
underlying their HiveContext.  We should make it possible to override
this using a system property so that people can test against
local-cluster or remote spark clusters to make their tests more
realistic.

Author: Punya Biswal <pbiswal@palantir.com>

Closes #6844 from punya/feature/SPARK-8397 and squashes the following commits:

97ef394 [Punya Biswal] [SPARK-8397][SQL] Allow custom configuration for TestHive
2015-06-17 15:29:39 -07:00
Yin Huai 302556ff99 [SPARK-8306] [SQL] AddJar command needs to set the new class loader to the HiveConf inside executionHive.state.
https://issues.apache.org/jira/browse/SPARK-8306

I will try to add a test later.

marmbrus aarondav

Author: Yin Huai <yhuai@databricks.com>

Closes #6758 from yhuai/SPARK-8306 and squashes the following commits:

1292346 [Yin Huai] [SPARK-8306] AddJar command needs to set the new class loader to the HiveConf inside executionHive.state.
2015-06-17 14:52:43 -07:00
Wenchen Fan 7f05b1fe69 [SPARK-7067] [SQL] fix bug when use complex nested fields in ORDER BY
This PR is a improvement for https://github.com/apache/spark/pull/5189.

The resolution rule for ORDER BY is: first resolve based on what comes from the select clause and then fall back on its child only when this fails.

There are 2 steps. First, try to resolve `Sort` in `ResolveReferences` based on select clause, and ignore exceptions. Second, try to resolve `Sort` in `ResolveSortReferences` and add missing projection.

However, the way we resolve `SortOrder` is wrong. We just resolve `UnresolvedAttribute` and use the result to indicate if we can resolve `SortOrder`. But `UnresolvedAttribute` is only part of `GetField` chain(broken by `GetItem`), so we need to go through the whole chain to indicate if we can resolve `SortOrder`.

With this change, we can also avoid re-throw GetField exception in `CheckAnalysis` which is little ugly.

Author: Wenchen Fan <cloud0fan@outlook.com>

Closes #5659 from cloud-fan/order-by and squashes the following commits:

cfa79f8 [Wenchen Fan] update test
3245d28 [Wenchen Fan] minor improve
465ee07 [Wenchen Fan] address comment
1fc41a2 [Wenchen Fan] fix SPARK-7067
2015-06-17 14:46:00 -07:00
OopsOutOfMemory 98ee3512b2 [SPARK-8010] [SQL] Promote types to StringType as implicit conversion in non-binary expression of HiveTypeCoercion
1. Given a query
`select coalesce(null, 1, '1') from dual` will cause exception:
java.lang.RuntimeException: Could not determine return type of Coalesce for IntegerType,StringType
2. Given a query:
`select case when true then 1 else '1' end from dual` will cause exception:
java.lang.RuntimeException: Types in CASE WHEN must be the same or coercible to a common type: StringType != IntegerType
I checked the code, the main cause is the HiveTypeCoercion doesn't do implicit convert when there is a IntegerType and StringType.

Numeric types can be promoted to string type

Hive will always do this implicit conversion.

Author: OopsOutOfMemory <victorshengli@126.com>

Closes #6551 from OopsOutOfMemory/pnts and squashes the following commits:

7a209d7 [OopsOutOfMemory] rebase master
6018613 [OopsOutOfMemory] convert function to method
4cd5618 [OopsOutOfMemory] limit the data type to primitive type
df365d2 [OopsOutOfMemory] refine
95cbd58 [OopsOutOfMemory] fix style
403809c [OopsOutOfMemory] promote non-string to string when can not found tighestCommonTypeOfTwo
2015-06-17 13:37:59 -07:00
Michael Davies 0c1b2df043 [SPARK-8077] [SQL] Optimization for TreeNodes with large numbers of children
For example large IN clauses

Large IN clauses are parsed very slowly. For example SQL below (10K items in IN) takes 45-50s.

s"""SELECT * FROM Person WHERE ForeName IN ('${(1 to 10000).map("n" + _).mkString("','")}')"""

This is principally due to TreeNode which repeatedly call contains on children, where children in this case is a List that is 10K long. In effect parsing for large IN clauses is O(N squared).
A lazily initialised Set based on children for contains reduces parse time to around 2.5s

Author: Michael Davies <Michael.BellDavies@gmail.com>

Closes #6673 from MickDavies/SPARK-8077 and squashes the following commits:

38cd425 [Michael Davies] SPARK-8077: Optimization for  TreeNodes with large numbers of children
d80103b [Michael Davies] SPARK-8077: Optimization for  TreeNodes with large numbers of children
e6be8be [Michael Davies] SPARK-8077: Optimization for  TreeNodes with large numbers of children
2015-06-17 12:56:55 -07:00
Liang-Chi Hsieh 104f30c36f [SPARK-7199] [SQL] Add date and timestamp support to UnsafeRow
JIRA: https://issues.apache.org/jira/browse/SPARK-7199

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #5984 from viirya/add_date_timestamp and squashes the following commits:

7f21ce9 [Liang-Chi Hsieh] For comment.
0b89698 [Liang-Chi Hsieh] Add timestamp to settableFieldTypes.
c30d490 [Liang-Chi Hsieh] Use default IntUnsafeColumnWriter and LongUnsafeColumnWriter.
672ef17 [Liang-Chi Hsieh] Remove getter/setter for Date and Timestamp and use Int and Long for them.
9f3e577 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into add_date_timestamp
281e844 [Liang-Chi Hsieh] Fix scala style.
fb532b5 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into add_date_timestamp
80af342 [Liang-Chi Hsieh] Fix compiling error.
f4f5de6 [Liang-Chi Hsieh] Fix scala style.
a463e83 [Liang-Chi Hsieh] Use Long to store timestamp for rows.
635388a [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into add_date_timestamp
46946c6 [Liang-Chi Hsieh] Adapt for moved DateUtils.
b16994e [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into add_date_timestamp
752251f [Liang-Chi Hsieh] Support setDate. Fix failed test.
fcf8db9 [Liang-Chi Hsieh] Add functions for Date and Timestamp to SpecificRow.
e42a809 [Liang-Chi Hsieh] Fix style.
4c07b57 [Liang-Chi Hsieh] Add date and timestamp support to UnsafeRow.
2015-06-17 09:00:37 -07:00
dragonli bedff7d532 [SPARK-8220][SQL]Add positive identify function
chenghao-intel adrian-wang

Author: dragonli <lisurprise@gmail.com>
Author: zhichao.li <zhichao.li@intel.com>

Closes #6838 from zhichao-li/positive and squashes the following commits:

e1032a0 [dragonli] remove useless import and refactor code
624d438 [zhichao.li] add positive identify function
2015-06-16 23:44:10 -07:00
baishuo 0b8c8fdc12 [SPARK-8156] [SQL] create table to specific database by 'use dbname'
when i test the following code:
hiveContext.sql("""use testdb""")
val df = (1 to 3).map(i => (i, s"val_$i", i * 2)).toDF("a", "b", "c")
df.write
.format("parquet")
.mode(SaveMode.Overwrite)
.saveAsTable("ttt3")
hiveContext.sql("show TABLES in default")

found that the table ttt3 will be created under the database "default"

Author: baishuo <vc_java@hotmail.com>

Closes #6695 from baishuo/SPARK-8516-use-database and squashes the following commits:

9e155f9 [baishuo] remove no use comment
cb9f027 [baishuo] modify testcase
00a7a2d [baishuo] modify testcase
4df48c7 [baishuo] modify testcase
b742e69 [baishuo] modify testcase
3d19ad9 [baishuo] create table to specific database
2015-06-16 16:40:02 -07:00
Radek Ostrowski 4bd10fd509 [SQL] [DOC] improved a comment
[SQL][DOC] I found it a bit confusing when I came across it for the first time in the docs

Author: Radek Ostrowski <dest.hawaii@gmail.com>
Author: radek <radek@radeks-MacBook-Pro-2.local>

Closes #6332 from radek1st/master and squashes the following commits:

dae3347 [Radek Ostrowski] fixed typo
c76bb3a [radek] improved a comment
2015-06-16 21:04:26 +01:00
Davies Liu bc76a0f750 [SPARK-7184] [SQL] enable codegen by default
In order to have better performance out of box, this PR turn on codegen by default, then codegen can be tested by sql/test and hive/test.

This PR also fix some corner cases for codegen.

Before 1.5 release, we should re-visit this, turn it off if it's not stable or causing regressions.

cc rxin JoshRosen

Author: Davies Liu <davies@databricks.com>

Closes #6726 from davies/enable_codegen and squashes the following commits:

f3b25a5 [Davies Liu] fix warning
73750ea [Davies Liu] fix long overflow when compare
3017a47 [Davies Liu] Merge branch 'master' of github.com:apache/spark into enable_codegen
a7d75da [Davies Liu] Merge branch 'master' of github.com:apache/spark into enable_codegen
ff5b75a [Davies Liu] Merge branch 'master' of github.com:apache/spark into enable_codegen
f4cf2c2 [Davies Liu] fix style
99fc139 [Davies Liu] Merge branch 'enable_codegen' of github.com:davies/spark into enable_codegen
91fc7a2 [Davies Liu] disable codegen for ScalaUDF
207e339 [Davies Liu] Update CodeGenerator.scala
44573a3 [Davies Liu] check thread safety of expression
f3886fa [Davies Liu] don't inline primitiveTerm for null literal
c8e7cd2 [Davies Liu] address comment
a8618c9 [Davies Liu] enable codegen by default
2015-06-15 23:03:14 -07:00
tedyu 1a62d61696 SPARK-8336 Fix NullPointerException with functions.rand()
This PR fixes the problem reported by Justin Yip in the thread 'NullPointerException with functions.rand()'

Tested using spark-shell and verified that the following works:
sqlContext.createDataFrame(Seq((1,2), (3, 100))).withColumn("index", rand(30)).show()

Author: tedyu <yuzhihong@gmail.com>

Closes #6793 from tedyu/master and squashes the following commits:

62fd97b [tedyu] Create RandomSuite
750f92c [tedyu] Add test for Rand() with seed
a1d66c5 [tedyu] Fix NullPointerException with functions.rand()
2015-06-15 17:00:38 -07:00
Yadong Qi 6ae21a944a [SPARK-6583] [SQL] Support aggregate functions in ORDER BY
Add aggregates in ORDER BY clauses to the `Aggregate` operator beneath.  Project these results away after the Sort.

Based on work by watermen.  Also Closes #5290.

Author: Yadong Qi <qiyadong2010@gmail.com>
Author: Michael Armbrust <michael@databricks.com>

Closes #6816 from marmbrus/pr/5290 and squashes the following commits:

3226a97 [Michael Armbrust] consistent ordering
eb8938d [Michael Armbrust] no vars
c8b25c1 [Yadong Qi] move the test data.
7f9b736 [Yadong Qi] delete Substring case
a1e87c1 [Yadong Qi] fix conflict
f119849 [Yadong Qi] order by aggregated function
2015-06-15 12:01:52 -07:00
Marcelo Vanzin 4eb48ed1da [SPARK-8065] [SQL] Add support for Hive 0.14 metastores
This change has two parts.

The first one gets rid of "ReflectionMagic". That worked well for the differences between 0.12 and
0.13, but breaks in 0.14, since some of the APIs that need to be used have primitive types. I could
not figure out a way to make that class work with primitive types. So instead I wrote some shims
 (I can already hear the collective sigh) that find the appropriate methods via reflection. This should
be faster since the method instances are cached, and the code is not much uglier than before,
with the advantage that all the ugliness is local to one file (instead of multiple switch statements on
the version being used scattered in ClientWrapper).

The second part is simple: add code to handle Hive 0.14. A few new methods had to be added
to the new shims.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #6627 from vanzin/SPARK-8065 and squashes the following commits:

3fa4270 [Marcelo Vanzin] Indentation style.
4b8a3d4 [Marcelo Vanzin] Fix dep exclusion.
be3d0cc [Marcelo Vanzin] Merge branch 'master' into SPARK-8065
ca3fb1e [Marcelo Vanzin] Merge branch 'master' into SPARK-8065
b43f13e [Marcelo Vanzin] Since exclusions seem to work, clean up some of the code.
73bd161 [Marcelo Vanzin] Botched merge.
d2ddf01 [Marcelo Vanzin] Comment about excluded dep.
0c929d1 [Marcelo Vanzin] Merge branch 'master' into SPARK-8065
2c3c02e [Marcelo Vanzin] Try to fix tests by adding support for exclusions.
0a03470 [Marcelo Vanzin] Try to fix tests by upgrading calcite dependency.
13b2dfa [Marcelo Vanzin] Fix NPE.
6439d88 [Marcelo Vanzin] Minor style thing.
69b017b [Marcelo Vanzin] Style.
a21cad8 [Marcelo Vanzin] Part II: Add shims / version for Hive 0.14.
ae98c87 [Marcelo Vanzin] PART I: Get rid of reflection magic.
2015-06-14 11:49:22 -07:00
Reynold Xin 53c16b92a5 [SPARK-8362] [SQL] Add unit tests for +, -, *, /, %
Added unit tests for all supported data types for:
- Add
- Subtract
- Multiply
- Divide
- UnaryMinus
- Remainder

Fixed bugs caught by the unit tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #6813 from rxin/SPARK-8362 and squashes the following commits:

fb3fe62 [Reynold Xin] Added Remainder.
3b266ba [Reynold Xin] [SPARK-8362] Add unit tests for +, -, *, /.
2015-06-14 11:23:23 -07:00
Michael Armbrust 9073a426e4 [SPARK-8358] [SQL] Wait for child resolution when resolving generators
Author: Michael Armbrust <michael@databricks.com>

Closes #6811 from marmbrus/aliasExplodeStar and squashes the following commits:

fbd2065 [Michael Armbrust] more style
806a373 [Michael Armbrust] fix style
7cbb530 [Michael Armbrust] [SPARK-8358][SQL] Wait for child resolution when resolving generatorsa
2015-06-14 11:21:42 -07:00
Josh Rosen ea7fd2ff64 [SPARK-8354] [SQL] Fix off-by-factor-of-8 error when allocating scratch space in UnsafeFixedWidthAggregationMap
UnsafeFixedWidthAggregationMap contains an off-by-factor-of-8 error when allocating row conversion scratch space: we take a size requirement, measured in bytes, then allocate a long array of that size.  This means that we end up allocating 8x too much conversion space.

This patch fixes this by allocating a `byte[]` array instead.  This doesn't impose any new limitations on the maximum sizes of UnsafeRows, since UnsafeRowConverter already used integers when calculating the size requirements for rows.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #6809 from JoshRosen/sql-bytes-vs-words-fix and squashes the following commits:

6520339 [Josh Rosen] Updates to reflect fact that UnsafeRow max size is constrained by max byte[] size
2015-06-14 09:34:35 -07:00
Liang-Chi Hsieh cb7ada1196 [SPARK-8342][SQL] Fix Decimal setOrNull
JIRA: https://issues.apache.org/jira/browse/SPARK-8342

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #6797 from viirya/fix_decimal and squashes the following commits:

8a447b1 [Liang-Chi Hsieh] Add unit test.
d67a5ea [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into fix_decimal
ab6d8af [Liang-Chi Hsieh] Fix setOrNull.
2015-06-13 22:42:28 -07:00
Reynold Xin 2d71ba4c8a [SPARK-8349] [SQL] Use expression constructors (rather than apply) in FunctionRegistry
Author: Reynold Xin <rxin@databricks.com>

Closes #6806 from rxin/gs and squashes the following commits:

ed1aebb [Reynold Xin] Fixed style.
c7fc3e6 [Reynold Xin] [SPARK-8349][SQL] Use expression constructors (rather than apply) in FunctionRegistry
2015-06-13 18:22:17 -07:00
Reynold Xin a138953391 [SPARK-8347][SQL] Add unit tests for abs.
Also addressed code review feedback from #6754

Author: Reynold Xin <rxin@databricks.com>

Closes #6803 from rxin/abs and squashes the following commits:

d07beba [Reynold Xin] [SPARK-8347] Add unit tests for abs.
2015-06-13 17:10:13 -07:00
Liang-Chi Hsieh ddec45279e [SPARK-8052] [SQL] Use java.math.BigDecimal for casting String to Decimal instead of using toDouble
JIRA: https://issues.apache.org/jira/browse/SPARK-8052

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #6645 from viirya/cast_string_integraltype and squashes the following commits:

e19c6a3 [Liang-Chi Hsieh] For comment.
c3e472a [Liang-Chi Hsieh] Add test.
7ced9b0 [Liang-Chi Hsieh] Use java.math.BigDecimal for casting String to Decimal instead of using toDouble.
2015-06-13 16:39:52 -07:00
Josh Rosen af31335adc [SPARK-8319] [CORE] [SQL] Update logic related to key orderings in shuffle dependencies
This patch updates two pieces of logic that are related to handling of keyOrderings in ShuffleDependencies:

- The Tungsten ShuffleManager falls back to regular SortShuffleManager whenever the shuffle dependency specifies a key ordering, but technically we only need to fall back when an aggregator is also specified. This patch updates the fallback logic to reflect this so that the Tungsten optimizations can apply to more workloads.

- The SQL Exchange operator performs defensive copying of shuffle inputs when a key ordering is specified, but this is unnecessary. The copying was added to guard against cases where ExternalSorter would buffer non-serialized records in memory.  When ExternalSorter is configured without an aggregator, it uses the following logic to determine whether to buffer records in a serialized or deserialized format:

   ```scala
     private val useSerializedPairBuffer =
        ordering.isEmpty &&
        conf.getBoolean("spark.shuffle.sort.serializeMapOutputs", true) &&
        ser.supportsRelocationOfSerializedObjects
   ```

   The `newOrdering.isDefined` branch in `ExternalSorter.needToCopyObjectsBeforeShuffle`, removed by this patch, is not necessary:

   - It was checked even if we weren't using sort-based shuffle, but this was unnecessary because only SortShuffleManager performs map-side sorting.
   - Map-side sorting during shuffle writing is only performed for shuffles that perform map-side aggregation as part of the shuffle (to see this, look at how SortShuffleWriter constructs ExternalSorter).  Since SQL never pushes aggregation into Spark's shuffle, we can guarantee that both the aggregator and ordering will be empty and Spark SQL always uses serializers that support relocation, so sort-shuffle will use the serialized pair buffer unless the user has explicitly disabled it via the SparkConf feature-flag.  Therefore, I think my optimization in Exchange should be safe.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #6773 from JoshRosen/SPARK-8319 and squashes the following commits:

7a14129 [Josh Rosen] Revise comments; add handler to guard against future ShuffleManager implementations
07bb2c9 [Josh Rosen] Update comment to clarify circumstances under which shuffle operates on serialized records
269089a [Josh Rosen] Avoid unnecessary copy in SQL Exchange
34e526e [Josh Rosen] Enable Tungsten shuffle for non-agg shuffles w/ key orderings
2015-06-13 16:14:24 -07:00
Davies Liu ce1041c38f [SPARK-8346] [SQL] Use InternalRow instread of catalyst.InternalRow
cc rxin marmbrus

Author: Davies Liu <davies@databricks.com>

Closes #6802 from davies/cleanup_internalrow and squashes the following commits:

769d2aa [Davies Liu] remove not needed cast
4acbbe4 [Davies Liu] catalyst.Internal -> InternalRow
2015-06-13 16:13:26 -07:00
Rene Treffer d986fb9a37 [SPARK-7897] Improbe type for jdbc/"unsigned bigint"
The original fix uses DecimalType.Unlimited, which is harder to
handle afterwards. There is no scale and most data should fit into
a long, thus DecimalType(20,0) should be better.

Author: Rene Treffer <treffer@measite.de>

Closes #6789 from rtreffer/spark-7897-unsigned-bigint-as-decimal and squashes the following commits:

2006613 [Rene Treffer] Fix type for "unsigned bigint" jdbc loading.
2015-06-13 11:58:22 -07:00
Michael Armbrust 4aed66f299 [SPARK-8329][SQL] Allow _ in DataSource options
Author: Michael Armbrust <michael@databricks.com>

Closes #6786 from marmbrus/optionsParser and squashes the following commits:

e7d18ef [Michael Armbrust] add dots
99a3452 [Michael Armbrust] [SPARK-8329][SQL] Allow _ in DataSource options
2015-06-12 23:11:16 -07:00
Davies Liu d46f8e5d4b [SPARK-7186] [SQL] Decouple internal Row from external Row
Currently, we use o.a.s.sql.Row both internally and externally. The external interface is wider than what the internal needs because it is designed to facilitate end-user programming. This design has proven to be very error prone and cumbersome for internal Row implementations.

As a first step, we create an InternalRow interface in the catalyst module, which is identical to the current Row interface. And we switch all internal operators/expressions to use this InternalRow instead. When we need to expose Row, we convert the InternalRow implementation into Row for users.

For all public API, we use Row (for example, data source APIs), which will be converted into/from InternalRow by CatalystTypeConverters.

For all internal data sources (Json, Parquet, JDBC, Hive), we use InternalRow for better performance, casted into Row in buildScan() (without change the public API). When create a PhysicalRDD, we cast them back to InternalRow.

cc rxin marmbrus JoshRosen

Author: Davies Liu <davies@databricks.com>

Closes #6792 from davies/internal_row and squashes the following commits:

f2abd13 [Davies Liu] fix scalastyle
a7e025c [Davies Liu] move InternalRow into catalyst
30db8ba [Davies Liu] Merge branch 'master' of github.com:apache/spark into internal_row
7cbced8 [Davies Liu] separate Row and InternalRow
2015-06-12 23:06:31 -07:00
akhilthatipamula 19834fa918 [SPARK-7993] [SQL] Improved DataFrame.show() output
Closes #6633

Author: akhilthatipamula <130050068@iitb.ac.in>
Author: zsxwing <zsxwing@gmail.com>

Closes #6784 from zsxwing/pr6633 and squashes the following commits:

5da1c51 [zsxwing] Address comments and add unit tests
17eab7b [akhilthatipamula] refactored code
19874b3 [akhilthatipamula] Update DataFrame.scala
0a76a5e [akhilthatipamula] Optimised showString()
e3dd03f [akhilthatipamula] Modified showString() method
a21012b [akhilthatipamula] improved the show()
4bb742f [akhilthatipamula] Modified dataframe.show() method
2015-06-12 10:40:28 -07:00
Wenchen Fan c19c78577a [SQL] [MINOR] correct semanticEquals logic
It's a follow up of https://github.com/apache/spark/pull/6173, for expressions like `Coalesce` that have a `Seq[Expression]`, when we do semantic equal check for it, we need to do semantic equal check for all of its children.
Also we can just use `Seq[(Expression, NamedExpression)]` instead of `Map[Expression, NamedExpression]` as we only search it with `find`.

chenghao-intel, I agree that we probably never knows `semanticEquals` in a general way, but I think we have done that in `TreeNode`, so we can use similar logic. Then we can handle something like `Coalesce(children: Seq[Expression])` correctly.

Author: Wenchen Fan <cloud0fan@outlook.com>

Closes #6261 from cloud-fan/tmp and squashes the following commits:

4daef88 [Wenchen Fan] address comments
dd8fbd9 [Wenchen Fan] correct semanticEquals
2015-06-12 16:38:28 +08:00
Yash Datta e428b3a951 [SPARK-6566] [SQL] Related changes for newer parquet version
This brings in major improvement in that footers are not read on the driver. This also cleans up the code in parquetTableOperations, where we had to override getSplits to eliminate multiple listStatus calls.

cc liancheng

are there any other changes we need for this ?

Author: Yash Datta <Yash.Datta@guavus.com>

Closes #5889 from saucam/parquet_1.6 and squashes the following commits:

d1bf41e [Yash Datta] SPARK-7340: Fix scalastyle and incorporate review comments
c9aa042 [Yash Datta] SPARK-7340: Use the new user defined filter predicate for pushing down inset into parquet
56bc750 [Yash Datta] SPARK-7340: Change parquet version to latest release
2015-06-12 13:44:09 +08:00
zhichao.li 2dd7f93080 [SPARK-7862] [SQL] Fix the deadlock in script transformation for stderr
[Related PR SPARK-7044] (https://github.com/apache/spark/pull/5671)

Author: zhichao.li <zhichao.li@intel.com>

Closes #6404 from zhichao-li/transform and squashes the following commits:

8418c97 [zhichao.li] add comments and remove useless failAfter logic
d9677e1 [zhichao.li] redirect the error desitination to be the same as the current process
2015-06-11 22:28:28 -07:00