Commit graph

101 commits

Author SHA1 Message Date
Patrick Wendell 947d700ec8 Preparing development version 1.4.0-SNAPSHOT 2015-05-23 20:13:05 -07:00
Patrick Wendell 03fb26a3e5 Preparing Spark release v1.4.0-rc2 2015-05-23 20:13:00 -07:00
Patrick Wendell f2f74b9b1a Preparing development version 1.4.1-SNAPSHOT 2015-05-23 14:59:37 -07:00
Patrick Wendell 0da7396990 Preparing Spark release v1.4.0-rc2-test 2015-05-23 14:59:31 -07:00
Patrick Wendell 8da8caab17 Preparing development version 1.4.1-SNAPSHOT 2015-05-23 14:46:27 -07:00
Patrick Wendell 8f50218f38 Preparing Spark release 1.4.0-rc2-test 2015-05-23 14:46:23 -07:00
Patrick Wendell 9b37e32c55 Preparing development version 1.4.0-SNAPSHOT 2015-05-20 17:29:00 -07:00
Patrick Wendell 1e458e3553 Preparing Spark release rc-test 2015-05-20 17:28:55 -07:00
pwendell 8d66849862 Preparing development version 1.4.0-SNAPSHOT 2015-05-20 17:26:15 -07:00
pwendell ae29aeaf8e Preparing Spark release rc-test 2015-05-20 17:26:10 -07:00
jenkins 534c787b9f Preparing development version 1.4.0-SNAPSHOT 2015-05-20 16:49:59 -07:00
jenkins 5f4d87f608 Preparing Spark release rc-test 2015-05-20 16:49:54 -07:00
Patrick Wendell 205ed15f29 Preparing development version 1.4.0-SNAPSHOT 2015-05-20 16:30:01 -07:00
Patrick Wendell 09a1c6231e Preparing Spark release rc-test 2015-05-20 16:29:52 -07:00
Patrick Wendell ac3197e1b9 Preparing development version 1.4.1-SNAPSHOT 2015-05-19 09:35:12 +00:00
Patrick Wendell 777a08166f Preparing Spark release v1.4.0-rc1 2015-05-19 09:35:12 +00:00
Patrick Wendell 586ede6b32 Revert "Preparing Spark release v1.4.0-rc1"
This reverts commit 79fb01a3be.
2015-05-19 02:27:14 -07:00
Patrick Wendell e7309ec729 Revert "Preparing development version 1.4.1-SNAPSHOT"
This reverts commit a1d896b85b.
2015-05-19 02:27:07 -07:00
Patrick Wendell a1d896b85b Preparing development version 1.4.1-SNAPSHOT 2015-05-19 07:13:24 +00:00
Patrick Wendell 79fb01a3be Preparing Spark release v1.4.0-rc1 2015-05-19 07:13:24 +00:00
Patrick Wendell b0c63d2413 Revert "Preparing Spark release v1.4.0-rc1"
This reverts commit 38ccef36c1.
2015-05-19 00:10:39 -07:00
Patrick Wendell 198a186ad3 Revert "Preparing development version 1.4.1-SNAPSHOT"
This reverts commit 40190ce226.
2015-05-19 00:10:37 -07:00
Patrick Wendell 40190ce226 Preparing development version 1.4.1-SNAPSHOT 2015-05-19 06:06:41 +00:00
Patrick Wendell 38ccef36c1 Preparing Spark release v1.4.0-rc1 2015-05-19 06:06:40 +00:00
Patrick Wendell 152b0291c0 Revert "Preparing Spark release v1.4.0-rc1"
This reverts commit e8e97e3a63.
2015-05-18 23:06:15 -07:00
Patrick Wendell 4d098bc049 Revert "Preparing development version 1.4.1-SNAPSHOT"
This reverts commit 758ca74bab.
2015-05-18 23:06:13 -07:00
Patrick Wendell 758ca74bab Preparing development version 1.4.1-SNAPSHOT 2015-05-19 05:01:11 +00:00
Patrick Wendell e8e97e3a63 Preparing Spark release v1.4.0-rc1 2015-05-19 05:01:11 +00:00
Lianhui Wang acf4bc1caa [SPARK-6869] [PYSPARK] Add pyspark archives path to PYTHONPATH
Based on https://github.com/apache/spark/pull/5478 that provide a PYSPARK_ARCHIVES_PATH env. within this PR, we just should export PYSPARK_ARCHIVES_PATH=/user/spark/pyspark.zip,/user/spark/python/lib/py4j-0.8.2.1-src.zip in conf/spark-env.sh when we don't install PySpark on each node of Yarn. i run python application successfully on yarn-client and yarn-cluster with this PR.
andrewor14 sryza Sephiroth-Lin Can you take a look at this?thanks.

Author: Lianhui Wang <lianhuiwang09@gmail.com>

Closes #5580 from lianhuiwang/SPARK-6869 and squashes the following commits:

66ffa43 [Lianhui Wang] Update Client.scala
c2ad0f9 [Lianhui Wang] Update Client.scala
1c8f664 [Lianhui Wang] Merge remote-tracking branch 'remotes/apache/master' into SPARK-6869
008850a [Lianhui Wang] Merge remote-tracking branch 'remotes/apache/master' into SPARK-6869
f0b4ed8 [Lianhui Wang] Merge remote-tracking branch 'remotes/apache/master' into SPARK-6869
150907b [Lianhui Wang] Merge remote-tracking branch 'remotes/apache/master' into SPARK-6869
20402cd [Lianhui Wang] use ZipEntry
9d87c3f [Lianhui Wang] update scala style
e7bd971 [Lianhui Wang] address vanzin's comments
4b8a3ed [Lianhui Wang] use pyArchivesEnvOpt
e6b573b [Lianhui Wang] address vanzin's comments
f11f84a [Lianhui Wang] zip pyspark archives
5192cca [Lianhui Wang] update import path
3b1e4c8 [Lianhui Wang] address tgravescs's comments
9396346 [Lianhui Wang] put zip to make-distribution.sh
0d2baf7 [Lianhui Wang] update import paths
e0179be [Lianhui Wang] add zip pyspark archives in build or sparksubmit
31e8e06 [Lianhui Wang] update code style
9f31dac [Lianhui Wang] update code and add comments
f72987c [Lianhui Wang] add archives path to PYTHONPATH

(cherry picked from commit ebff7327af)
Signed-off-by: Thomas Graves <tgraves@apache.org>
2015-05-08 08:45:13 -05:00
Sean Owen 7f3b3b7eb7 [SPARK-7168] [BUILD] Update plugin versions in Maven build and centralize versions
Update Maven build plugin versions and centralize plugin version management

Author: Sean Owen <sowen@cloudera.com>

Closes #5720 from srowen/SPARK-7168 and squashes the following commits:

98a8947 [Sean Owen] Make install, deploy plugin versions explicit
4ecf3b2 [Sean Owen] Update Maven build plugin versions and centralize plugin version management
2015-04-28 07:48:34 -04:00
Calvin Jia 438859eb7c [SPARK-6122] [CORE] Upgrade tachyon-client version to 0.6.3
This is a reopening of #4867.
A short summary of the issues resolved from the previous PR:

1. HTTPClient version mismatch: Selenium (used for UI tests) requires version 4.3.x, and Tachyon included 4.2.5 through a transitive dependency of its shaded thrift jar. To address this, Tachyon 0.6.3 will promote the transitive dependencies of the shaded jar so they can be excluded in spark.

2. Jackson-Mapper-ASL version mismatch: In lower versions of hadoop-client (ie. 1.0.4), version 1.0.1 is included. The parquet library used in spark sql requires version 1.8+. Its unclear to me why upgrading tachyon-client would cause this dependency to break. The solution was to exclude jackson-mapper-asl from hadoop-client.

It seems that the dependency management in spark-parent will not work on transitive dependencies, one way to make sure jackson-mapper-asl is included with the correct version is to add it as a top level dependency. The best solution would be to exclude the dependency in the modules which require a higher version, but that did not fix the unit tests. Any suggestions on the best way to solve this would be appreciated!

Author: Calvin Jia <jia.calvin@gmail.com>

Closes #5354 from calvinjia/upgrade_tachyon_0.6.3 and squashes the following commits:

0eefe4d [Calvin Jia] Handle httpclient version in maven dependency management. Remove httpclient version setting from profiles.
7c00dfa [Calvin Jia] Set httpclient version to 4.3.2 for selenium. Specify version of httpclient for sql/hive (previously 4.2.5 transitive dependency of libthrift).
9263097 [Calvin Jia] Merge master to test latest changes
dbfc1bd [Calvin Jia] Use Tachyon 0.6.4 for cleaner dependencies.
e2ff80a [Calvin Jia] Exclude the jetty and curator promoted dependencies from tachyon-client.
a3a29da [Calvin Jia] Update tachyon-client exclusions.
0ae6c97 [Calvin Jia] Change tachyon version to 0.6.3
a204df9 [Calvin Jia] Update make distribution tachyon version.
a93c94f [Calvin Jia] Exclude jackson-mapper-asl from hadoop client since it has a lower version than spark's expected version.
a8a923c [Calvin Jia] Exclude httpcomponents from Tachyon
910fabd [Calvin Jia] Update to master
eed9230 [Calvin Jia] Update tachyon version to 0.6.1.
11907b3 [Calvin Jia] Use TachyonURI for tachyon paths instead of strings.
71bf441 [Calvin Jia] Upgrade Tachyon client version to 0.6.0.
2015-04-24 17:57:41 -04:00
Marcelo Vanzin a74564591f [SPARK-6371] [build] Update version to 1.4.0-SNAPSHOT.
Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #5056 from vanzin/SPARK-6371 and squashes the following commits:

63220df [Marcelo Vanzin] Merge branch 'master' into SPARK-6371
6506f75 [Marcelo Vanzin] Use more fine-grained exclusion.
178ba71 [Marcelo Vanzin] Oops.
75b2375 [Marcelo Vanzin] Exclude VertexRDD in MiMA.
a45a62c [Marcelo Vanzin] Work around MIMA warning.
1d8a670 [Marcelo Vanzin] Re-group jetty exclusion.
0e8e909 [Marcelo Vanzin] Ignore ml, don't ignore graphx.
cef4603 [Marcelo Vanzin] Indentation.
296cf82 [Marcelo Vanzin] [SPARK-6371] [build] Update version to 1.4.0-SNAPSHOT.
2015-03-20 18:43:57 +00:00
Xiangrui Meng 0cba802adf [SPARK-5814][MLLIB][GRAPHX] Remove JBLAS from runtime
The issue is discussed in https://issues.apache.org/jira/browse/SPARK-5669. Replacing all JBLAS usage by netlib-java gives us a simpler dependency tree and less license issues to worry about. I didn't touch the test scope in this PR. The user guide is not modified to avoid merge conflicts with branch-1.3. srowen ankurdave pwendell

Author: Xiangrui Meng <meng@databricks.com>

Closes #4699 from mengxr/SPARK-5814 and squashes the following commits:

48635c6 [Xiangrui Meng] move netlib-java version to parent pom
ca21c74 [Xiangrui Meng] remove jblas from ml-guide
5f7767a [Xiangrui Meng] Merge remote-tracking branch 'apache/master' into SPARK-5814
c5c4183 [Xiangrui Meng] merge master
0f20cad [Xiangrui Meng] add mima excludes
e53e9f4 [Xiangrui Meng] remove jblas from mllib runtime
ceaa14d [Xiangrui Meng] replace jblas by netlib-java in graphx
fa7c2ca [Xiangrui Meng] move jblas to test scope
2015-03-12 01:39:04 -07:00
Sean Owen c9cfba0ceb SPARK-6182 [BUILD] spark-parent pom needs to be published for both 2.10 and 2.11
Option 1 of 2: Convert spark-parent module name to spark-parent_2.10 / spark-parent_2.11

Author: Sean Owen <sowen@cloudera.com>

Closes #4912 from srowen/SPARK-6182.1 and squashes the following commits:

eff60de [Sean Owen] Convert spark-parent module name to spark-parent_2.10 / spark-parent_2.11
2015-03-05 11:31:48 -08:00
Sean Owen 5aecdcf1f2 SPARK-5669 [BUILD] [HOTFIX] Spark assembly includes incompatibly licensed libgfortran, libgcc code via JBLAS
Correct exclusion path for JBLAS native libs.
(More explanation coming soon on the mailing list re: 1.3.0 RC1)

Author: Sean Owen <sowen@cloudera.com>

Closes #4673 from srowen/SPARK-5669.2 and squashes the following commits:

e29693c [Sean Owen] Correct exclusion path for JBLAS native libs
2015-02-18 14:41:44 +00:00
Sean Owen 836577b382 SPARK-5669 [BUILD] Spark assembly includes incompatibly licensed libgfortran, libgcc code via JBLAS
Exclude libgfortran, libgcc bundled by JBLAS for Windows. This much is simple, and solves the essential license issue. But the more important question is whether MLlib works on Windows then.

Author: Sean Owen <sowen@cloudera.com>

Closes #4453 from srowen/SPARK-5669 and squashes the following commits:

734dd86 [Sean Owen] Exclude libgfortran, libgcc bundled by JBLAS, affecting Windows / OS X / Linux 32-bit (not Linux 64-bit)
2015-02-15 09:15:48 -08:00
Sean Owen 9a3ea49f74 SPARK-5727 [BUILD] Remove Debian packaging
(for master / 1.4 only)

Author: Sean Owen <sowen@cloudera.com>

Closes #4526 from srowen/SPARK-5727.2 and squashes the following commits:

83ba49c [Sean Owen] Remove Debian packaging
2015-02-12 12:36:26 +00:00
Sean Owen bd0d6e0cc3 SPARK-5727 [BUILD] Deprecate Debian packaging
This just adds a deprecation message. It's intended for backporting to branch 1.3 but can go in master too, to be followed by another PR that removes it for 1.4.

Author: Sean Owen <sowen@cloudera.com>

Closes #4516 from srowen/SPARK-5727.1 and squashes the following commits:

d48989f [Sean Owen] Refer to Spark 1.4
6c1c8b3 [Sean Owen] Deprecate Debian packaging
2015-02-11 08:30:16 +00:00
Nicholas Chammas cf6778e8d8 [Build] Set all Debian package permissions to 755
755 means the owner can read, write, and execute, and everyone else can just read and execute. I think that's what we want here since without execute permissions others cannot open directories.

Inspired by [this comment on a separate PR](https://github.com/apache/spark/pull/3297#issuecomment-63286730).

Author: Nicholas Chammas <nicholas.chammas@gmail.com>

Closes #4277 from nchammas/patch-1 and squashes the following commits:

da77fb0 [Nicholas Chammas] [Build] Set all Debian package permissions to 755
2015-02-06 11:38:39 +00:00
Marcelo Vanzin 37a5e272f8 [SPARK-4809] Rework Guava library shading.
The current way of shading Guava is a little problematic. Code that
depends on "spark-core" does not see the transitive dependency, yet
classes in "spark-core" actually depend on Guava. So it's a little
tricky to run unit tests that use spark-core classes, since you need
a compatible version of Guava in your dependencies when running the
tests. This can become a little tricky, and is kind of a bad user
experience.

This change modifies the way Guava is shaded so that it's applied
uniformly across the Spark build. This means Guava is shaded inside
spark-core itself, so that the dependency issues above are solved.
Aside from that, all Spark sub-modules have their Guava references
relocated, so that they refer to the relocated classes now packaged
inside spark-core. Before, this was only done by the time the assembly
was built, so projects that did not end up inside the assembly (such
as streaming backends) could still reference the original location
of Guava classes.

The Guava classes are added to the "first" artifact Spark generates
(network-common), so that all downstream modules have the needed
classes available. Since "network-common" is a dependency of spark-core,
all Spark apps should get the relocated classes automatically.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #3658 from vanzin/SPARK-4809 and squashes the following commits:

3c93e42 [Marcelo Vanzin] Shade Guava in the network-common artifact.
5d69ec9 [Marcelo Vanzin] Merge branch 'master' into SPARK-4809
b3104fc [Marcelo Vanzin] Add comment.
941848f [Marcelo Vanzin] Merge branch 'master' into SPARK-4809
f78c48a [Marcelo Vanzin] Merge branch 'master' into SPARK-4809
8053dd4 [Marcelo Vanzin] Merge branch 'master' into SPARK-4809
107d7da [Marcelo Vanzin] Add fix for SPARK-5052 (PR #3874).
40b8723 [Marcelo Vanzin] Merge branch 'master' into SPARK-4809
4a4ed42 [Marcelo Vanzin] [SPARK-4809] Rework Guava library shading.
2015-01-28 00:29:29 -08:00
Elmer Garduno 661e0fca5d [SPARK-5052] Add common/base classes to fix guava methods signatures.
Fixes problems with incorrect method signatures related to shaded classes. For discussion see the jira issue.

Author: Elmer Garduno <elmerg@google.com>

Closes #3874 from elmer-garduno/fix_guava_signatures and squashes the following commits:

aa5d8e0 [Elmer Garduno] Unshade common/base[Function|Supplier] classes to fix guava methods signatures.
2015-01-26 17:40:48 -08:00
Marcelo Vanzin 48cecf673c [SPARK-4048] Enhance and extend hadoop-provided profile.
This change does a few things to make the hadoop-provided profile more useful:

- Create new profiles for other libraries / services that might be provided by the infrastructure
- Simplify and fix the poms so that the profiles are only activated while building assemblies.
- Fix tests so that they're able to run when the profiles are activated
- Add a new env variable to be used by distributions that use these profiles to provide the runtime
  classpath for Spark jobs and daemons.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #2982 from vanzin/SPARK-4048 and squashes the following commits:

82eb688 [Marcelo Vanzin] Add a comment.
eb228c0 [Marcelo Vanzin] Fix borked merge.
4e38f4e [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
9ef79a3 [Marcelo Vanzin] Alternative way to propagate test classpath to child processes.
371ebee [Marcelo Vanzin] Review feedback.
52f366d [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
83099fc [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
7377e7b [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
322f882 [Marcelo Vanzin] Fix merge fail.
f24e9e7 [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
8b00b6a [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
9640503 [Marcelo Vanzin] Cleanup child process log message.
115fde5 [Marcelo Vanzin] Simplify a comment (and make it consistent with another pom).
e3ab2da [Marcelo Vanzin] Fix hive-thriftserver profile.
7820d58 [Marcelo Vanzin] Fix CliSuite with provided profiles.
1be73d4 [Marcelo Vanzin] Restore flume-provided profile.
d1399ed [Marcelo Vanzin] Restore jetty dependency.
82a54b9 [Marcelo Vanzin] Remove unused profile.
5c54a25 [Marcelo Vanzin] Fix HiveThriftServer2Suite with *-provided profiles.
1fc4d0b [Marcelo Vanzin] Update dependencies for hive-thriftserver.
f7b3bbe [Marcelo Vanzin] Add snappy to hadoop-provided list.
9e4e001 [Marcelo Vanzin] Remove duplicate hive profile.
d928d62 [Marcelo Vanzin] Redirect child stderr to parent's log.
4d67469 [Marcelo Vanzin] Propagate SPARK_DIST_CLASSPATH on Yarn.
417d90e [Marcelo Vanzin] Introduce "SPARK_DIST_CLASSPATH".
2f95f0d [Marcelo Vanzin] Propagate classpath to child processes during testing.
1adf91c [Marcelo Vanzin] Re-enable maven-install-plugin for a few projects.
284dda6 [Marcelo Vanzin] Rework the "hadoop-provided" profile, add new ones.
2015-01-08 17:15:13 -08:00
Sandy Ryza 912563aa35 SPARK-4338. [YARN] Ditch yarn-alpha.
Sorry if this is a little premature with 1.2 still not out the door, but it will make other work like SPARK-4136 and SPARK-2089 a lot easier.

Author: Sandy Ryza <sandy@cloudera.com>

Closes #3215 from sryza/sandy-spark-4338 and squashes the following commits:

1c5ac08 [Sandy Ryza] Update building Spark docs and remove unnecessary newline
9c1421c [Sandy Ryza] SPARK-4338. Ditch yarn-alpha.
2014-12-09 11:02:43 -08:00
Marcelo Vanzin 397d3aae5b Bumping version to 1.3.0-SNAPSHOT.
Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #3277 from vanzin/version-1.3 and squashes the following commits:

7c3c396 [Marcelo Vanzin] Added temp repo to sbt build.
5f404ff [Marcelo Vanzin] Add another exclusion.
19457e7 [Marcelo Vanzin] Update old version to 1.2, add temporary 1.2 repo.
3c8d705 [Marcelo Vanzin] Workaround for MIMA checks.
e940810 [Marcelo Vanzin] Bumping version to 1.3.0-SNAPSHOT.
2014-11-18 21:24:18 -08:00
Prashant Sharma daaca14c16 Support cross building for Scala 2.11
Let's give this another go using a version of Hive that shades its JLine dependency.

Author: Prashant Sharma <prashant.s@imaginea.com>
Author: Patrick Wendell <pwendell@gmail.com>

Closes #3159 from pwendell/scala-2.11-prashant and squashes the following commits:

e93aa3e [Patrick Wendell] Restoring -Phive-thriftserver profile and cleaning up build script.
f65d17d [Patrick Wendell] Fixing build issue due to merge conflict
a8c41eb [Patrick Wendell] Reverting dev/run-tests back to master state.
7a6eb18 [Patrick Wendell] Merge remote-tracking branch 'apache/master' into scala-2.11-prashant
583aa07 [Prashant Sharma] REVERT ME: removed hive thirftserver
3680e58 [Prashant Sharma] Revert "REVERT ME: Temporarily removing some Cli tests."
935fb47 [Prashant Sharma] Revert "Fixed by disabling a few tests temporarily."
925e90f [Prashant Sharma] Fixed by disabling a few tests temporarily.
2fffed3 [Prashant Sharma] Exclude groovy from sbt build, and also provide a way for such instances in future.
8bd4e40 [Prashant Sharma] Switched to gmaven plus, it fixes random failures observer with its predecessor gmaven.
5272ce5 [Prashant Sharma] SPARK_SCALA_VERSION related bugs.
2121071 [Patrick Wendell] Migrating version detection to PySpark
b1ed44d [Patrick Wendell] REVERT ME: Temporarily removing some Cli tests.
1743a73 [Patrick Wendell] Removing decimal test that doesn't work with Scala 2.11
f5cad4e [Patrick Wendell] Add Scala 2.11 docs
210d7e1 [Patrick Wendell] Revert "Testing new Hive version with shaded jline"
48518ce [Patrick Wendell] Remove association of Hive and Thriftserver profiles.
e9d0a06 [Patrick Wendell] Revert "Enable thritfserver for Scala 2.10 only"
67ec364 [Patrick Wendell] Guard building of thriftserver around Scala 2.10 check
8502c23 [Patrick Wendell] Enable thritfserver for Scala 2.10 only
e22b104 [Patrick Wendell] Small fix in pom file
ec402ab [Patrick Wendell] Various fixes
0be5a9d [Patrick Wendell] Testing new Hive version with shaded jline
4eaec65 [Prashant Sharma] Changed scripts to ignore target.
5167bea [Prashant Sharma] small correction
a4fcac6 [Prashant Sharma] Run against scala 2.11 on jenkins.
80285f4 [Prashant Sharma] MAven equivalent of setting spark.executor.extraClasspath during tests.
034b369 [Prashant Sharma] Setting test jars on executor classpath during tests from sbt.
d4874cb [Prashant Sharma] Fixed Python Runner suite. null check should be first case in scala 2.11.
6f50f13 [Prashant Sharma] Fixed build after rebasing with master. We should use ${scala.binary.version} instead of just 2.10
e56ca9d [Prashant Sharma] Print an error if build for 2.10 and 2.11 is spotted.
937c0b8 [Prashant Sharma] SCALA_VERSION -> SPARK_SCALA_VERSION
cb059b0 [Prashant Sharma] Code review
0476e5e [Prashant Sharma] Scala 2.11 support with repl and all build changes.
2014-11-11 21:36:48 -08:00
Xiangrui Meng d8176b1c2f [SPARK-4121] Set commons-math3 version based on hadoop profiles, instead of shading
In #2928 , we shade commons-math3 to prevent future conflicts with hadoop. It caused problems with our Jenkins master build with maven. Some tests used local-cluster mode, where the assembly jar contains relocated math3 classes, while mllib test code still compiles with core and the untouched math3 classes.

This PR sets commons-math3 version based on hadoop profiles.

pwendell JoshRosen srowen

Author: Xiangrui Meng <meng@databricks.com>

Closes #3023 from mengxr/SPARK-4121-alt and squashes the following commits:

580f6d9 [Xiangrui Meng] replace tab by spaces
7f71f08 [Xiangrui Meng] revert changes to PoissonSampler to avoid conflicts
d3353d9 [Xiangrui Meng] do not shade commons-math3
b4180dc [Xiangrui Meng] temp work
2014-11-01 15:21:36 -07:00
wangfei 7c41d13570 [SPARK-3826][SQL]enable hive-thriftserver to support hive-0.13.1
In #2241 hive-thriftserver is not enabled. This patch enable hive-thriftserver to support hive-0.13.1 by using a shim layer refer to #2241.

 1 A light shim layer(code in sql/hive-thriftserver/hive-version) for each different hive version to handle api compatibility

 2 New pom profiles "hive-default" and "hive-versions"(copy from #2241) to activate different hive version

 3 SBT cmd for different version as follows:
   hive-0.12.0 --- sbt/sbt -Phive,hadoop-2.3 -Phive-0.12.0 assembly
   hive-0.13.1 --- sbt/sbt -Phive,hadoop-2.3 -Phive-0.13.1 assembly

 4 Since hive-thriftserver depend on hive subproject, this patch should be merged with #2241 to enable hive-0.13.1 for hive-thriftserver

Author: wangfei <wangfei1@huawei.com>
Author: scwf <wangfei1@huawei.com>

Closes #2685 from scwf/shim-thriftserver1 and squashes the following commits:

f26f3be [wangfei] remove clean to save time
f5cac74 [wangfei] remove local hivecontext test
578234d [wangfei] use new shaded hive
18fb1ff [wangfei] exclude kryo in hive pom
fa21d09 [wangfei] clean package assembly/assembly
8a4daf2 [wangfei] minor fix
0d7f6cf [wangfei] address comments
f7c93ae [wangfei] adding build with hive 0.13 before running tests
bcf943f [wangfei] Merge branch 'master' of https://github.com/apache/spark into shim-thriftserver1
c359822 [wangfei] reuse getCommandProcessor in hiveshim
52674a4 [scwf] sql/hive included since examples depend on it
3529e98 [scwf] move hive module to hive profile
f51ff4e [wangfei] update and fix conflicts
f48d3a5 [scwf] Merge branch 'master' of https://github.com/apache/spark into shim-thriftserver1
41f727b [scwf] revert pom changes
13afde0 [scwf] fix small bug
4b681f4 [scwf] enable thriftserver in profile hive-0.13.1
0bc53aa [scwf] fixed when result filed is null
dfd1c63 [scwf] update run-tests to run hive-0.12.0 default now
c6da3ce [scwf] Merge branch 'master' of https://github.com/apache/spark into shim-thriftserver
7c66b8e [scwf] update pom according spark-2706
ae47489 [scwf] update and fix conflicts
2014-10-31 11:27:59 -07:00
Sean Owen bfa614b127 SPARK-4022 [CORE] [MLLIB] Replace colt dependency (LGPL) with commons-math
This change replaces usages of colt with commons-math3 equivalents, and makes some minor necessary adjustments to related code and tests to match.

Author: Sean Owen <sowen@cloudera.com>

Closes #2928 from srowen/SPARK-4022 and squashes the following commits:

61a232f [Sean Owen] Fix failure due to different sampling in JavaAPISuite.sample()
16d66b8 [Sean Owen] Simplify seeding with call to reseedRandomGenerator
a1a78e0 [Sean Owen] Use Well19937c
31c7641 [Sean Owen] Fix Python Poisson test by choosing a different seed; about 88% of seeds should work but 1 didn't, it seems
5c9c67f [Sean Owen] Additional test fixes from review
d8f88e0 [Sean Owen] Replace colt with commons-math3. Some tests do not pass yet.
2014-10-27 10:53:15 -07:00
Zhan Zhang 7c89a8f0c8 [SPARK-2706][SQL] Enable Spark to support Hive 0.13
Given that a lot of users are trying to use hive 0.13 in spark, and the incompatibility between hive-0.12 and hive-0.13 on the API level I want to propose following approach, which has no or minimum impact on existing hive-0.12 support, but be able to jumpstart the development of hive-0.13 and future version support.

Approach: Introduce “hive-version” property,  and manipulate pom.xml files to support different hive version at compiling time through shim layer, e.g., hive-0.12.0 and hive-0.13.1. More specifically,

1. For each different hive version, there is a very light layer of shim code to handle API differences, sitting in sql/hive/hive-version, e.g., sql/hive/v0.12.0 or sql/hive/v0.13.1

2. Add a new profile hive-default active by default, which picks up all existing configuration and hive-0.12.0 shim (v0.12.0)  if no hive.version is specified.

3. If user specifies different version (currently only 0.13.1 by -Dhive.version = 0.13.1), hive-versions profile will be activated, which pick up hive-version specific shim layer and configuration, mainly the hive jars and hive-version shim, e.g., v0.13.1.

4. With this approach, nothing is changed with current hive-0.12 support.

No change by default: sbt/sbt -Phive
For example: sbt/sbt -Phive -Pyarn -Phadoop-2.4 -Dhadoop.version=2.4.0 assembly

To enable hive-0.13: sbt/sbt -Dhive.version=0.13.1
For example: sbt/sbt -Dhive.version=0.13.1 -Pyarn -Phadoop-2.4 -Dhadoop.version=2.4.0 assembly

Note that in hive-0.13, hive-thriftserver is not enabled, which should be fixed by other Jira, and we don’t need -Phive with -Dhive.version in building (probably we should use -Phive -Dhive.version=xxx instead after thrift server is also supported in hive-0.13.1).

Author: Zhan Zhang <zhazhan@gmail.com>
Author: zhzhan <zhazhan@gmail.com>
Author: Patrick Wendell <pwendell@gmail.com>

Closes #2241 from zhzhan/spark-2706 and squashes the following commits:

3ece905 [Zhan Zhang] minor fix
410b668 [Zhan Zhang] solve review comments
cbb4691 [Zhan Zhang] change run-test for new options
0d4d2ed [Zhan Zhang] rebase
497b0f4 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
8fad1cf [Zhan Zhang] change the pom file and make hive-0.13.1 as the default
ab028d1 [Zhan Zhang] rebase
4a2e36d [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
4cb1b93 [zhzhan] Merge pull request #1 from pwendell/pr-2241
b0478c0 [Patrick Wendell] Changes to simplify the build of SPARK-2706
2b50502 [Zhan Zhang] rebase
a72c0d4 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
cb22863 [Zhan Zhang] correct the typo
20f6cf7 [Zhan Zhang] solve compatability issue
f7912a9 [Zhan Zhang] rebase and solve review feedback
301eb4a [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
10c3565 [Zhan Zhang] address review comments
6bc9204 [Zhan Zhang] rebase and remove temparory repo
d3aa3f2 [Zhan Zhang] Merge branch 'master' into spark-2706
cedcc6f [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
3ced0d7 [Zhan Zhang] rebase
d9b981d [Zhan Zhang] rebase and fix error due to rollback
adf4924 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
3dd50e8 [Zhan Zhang] solve conflicts and remove unnecessary implicts
d10bf00 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
dc7bdb3 [Zhan Zhang] solve conflicts
7e0cc36 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
d7c3e1e [Zhan Zhang] Merge branch 'master' into spark-2706
68deb11 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
d48bd18 [Zhan Zhang] address review comments
3ee3b2b [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
57ea52e [Zhan Zhang] Merge branch 'master' into spark-2706
2b0d513 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
9412d24 [Zhan Zhang] address review comments
f4af934 [Zhan Zhang] rebase
1ccd7cc [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
128b60b [Zhan Zhang] ignore 0.12.0 test cases for the time being
af9feb9 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
5f5619f [Zhan Zhang] restructure the directory and different hive version support
05d3683 [Zhan Zhang] solve conflicts
e4c1982 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
94b4fdc [Zhan Zhang] Spark-2706: hive-0.13.1 support on spark
87ebf3b [Zhan Zhang] Merge branch 'master' into spark-2706
921e914 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
f896b2a [Zhan Zhang] Merge branch 'master' into spark-2706
789ea21 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
cb53a2c [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
f6a8a40 [Zhan Zhang] revert
ba14f28 [Zhan Zhang] test
dbedff3 [Zhan Zhang] Merge remote-tracking branch 'upstream/master'
70964fe [Zhan Zhang] revert
fe0f379 [Zhan Zhang] Merge branch 'master' of https://github.com/zhzhan/spark
70ffd93 [Zhan Zhang] revert
42585ec [Zhan Zhang] test
7d5fce2 [Zhan Zhang] test
2014-10-24 11:03:17 -07:00
aniketbhatnagar 93861a5e87 SPARK-3638 | Forced a compatible version of http client in kinesis-asl profile
This patch forces use of commons http client 4.2 in Kinesis-asl profile so that the AWS SDK does not run into dependency conflicts

Author: aniketbhatnagar <aniket.bhatnagar@gmail.com>

Closes #2535 from aniketbhatnagar/Kinesis-HttpClient-Dep-Fix and squashes the following commits:

aa2079f [aniketbhatnagar] Merge branch 'Kinesis-HttpClient-Dep-Fix' of https://github.com/aniketbhatnagar/spark into Kinesis-HttpClient-Dep-Fix
73f55f6 [aniketbhatnagar] SPARK-3638 | Forced a compatible version of http client in kinesis-asl profile
70cc75b [aniketbhatnagar] deleted merge files
725dbc9 [aniketbhatnagar] Merge remote-tracking branch 'origin/Kinesis-HttpClient-Dep-Fix' into Kinesis-HttpClient-Dep-Fix
4ed61d8 [aniketbhatnagar] SPARK-3638 | Forced a compatible version of http client in kinesis-asl profile
9cd6103 [aniketbhatnagar] SPARK-3638 | Forced a compatible version of http client in kinesis-asl profile
2014-10-01 18:31:18 -07:00