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4918 commits

Author SHA1 Message Date
Wenchen Fan aff53021cf [SPARK-19080][SQL] simplify data source analysis
## What changes were proposed in this pull request?

The current way of resolving `InsertIntoTable` and `CreateTable` is convoluted: sometimes we replace them with concrete implementation commands during analysis, sometimes during planning phase.

And the error checking logic is also a mess: we may put it in extended analyzer rules, or extended checking rules, or `CheckAnalysis`.

This PR simplifies the data source analysis:

1.  `InsertIntoTable` and `CreateTable` are always unresolved and need to be replaced by concrete implementation commands during analysis.
2. The error checking logic is mainly in 2 rules: `PreprocessTableCreation` and `PreprocessTableInsertion`.

## How was this patch tested?

existing test.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #16269 from cloud-fan/ddl.
2017-02-07 00:36:57 +08:00
hyukjinkwon 0f16ff5b0e [SPARK-17213][SQL][FOLLOWUP] Re-enable Parquet filter tests for binary and string
## What changes were proposed in this pull request?

This PR proposes to enable the tests for Parquet filter pushdown with binary and string.

This was disabled in https://github.com/apache/spark/pull/16106 due to Parquet's issue but it is now revived in https://github.com/apache/spark/pull/16791 after upgrading Parquet to 1.8.2.

## How was this patch tested?

Manually tested `ParquetFilterSuite` via IDE.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16817 from HyukjinKwon/SPARK-17213.
2017-02-06 23:10:05 +08:00
Cheng Lian 7730426cb9 [SPARK-19409][SPARK-17213] Cleanup Parquet workarounds/hacks due to bugs of old Parquet versions
## What changes were proposed in this pull request?

We've already upgraded parquet-mr to 1.8.2. This PR does some further cleanup by removing a workaround of PARQUET-686 and a hack due to PARQUET-363 and PARQUET-278. All three Parquet issues are fixed in parquet-mr 1.8.2.

## How was this patch tested?

Existing unit tests.

Author: Cheng Lian <lian@databricks.com>

Closes #16791 from liancheng/parquet-1.8.2-cleanup.
2017-02-06 09:10:55 +01:00
gatorsmile 65b10ffb38 [SPARK-19279][SQL] Infer Schema for Hive Serde Tables and Block Creating a Hive Table With an Empty Schema
### What changes were proposed in this pull request?
So far, we allow users to create a table with an empty schema: `CREATE TABLE tab1`. This could break many code paths if we enable it. Thus, we should follow Hive to block it.

For Hive serde tables, some serde libraries require the specified schema and record it in the metastore. To get the list, we need to check `hive.serdes.using.metastore.for.schema,` which contains a list of serdes that require user-specified schema. The default values are

- org.apache.hadoop.hive.ql.io.orc.OrcSerde
- org.apache.hadoop.hive.serde2.lazy.LazySimpleSerDe
- org.apache.hadoop.hive.serde2.columnar.ColumnarSerDe
- org.apache.hadoop.hive.serde2.dynamic_type.DynamicSerDe
- org.apache.hadoop.hive.serde2.MetadataTypedColumnsetSerDe
- org.apache.hadoop.hive.serde2.columnar.LazyBinaryColumnarSerDe
- org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe
- org.apache.hadoop.hive.serde2.lazybinary.LazyBinarySerDe

### How was this patch tested?
Added test cases for both Hive and data source tables

Author: gatorsmile <gatorsmile@gmail.com>

Closes #16636 from gatorsmile/fixEmptyTableSchema.
2017-02-06 13:30:07 +08:00
Liang-Chi Hsieh 0674e7eb85 [SPARK-19425][SQL] Make ExtractEquiJoinKeys support UDT columns
## What changes were proposed in this pull request?

DataFrame.except doesn't work for UDT columns. It is because `ExtractEquiJoinKeys` will run `Literal.default` against UDT. However, we don't handle UDT in `Literal.default` and an exception will throw like:

    java.lang.RuntimeException: no default for type
    org.apache.spark.ml.linalg.VectorUDT3bfc3ba7
      at org.apache.spark.sql.catalyst.expressions.Literal$.default(literals.scala:179)
      at org.apache.spark.sql.catalyst.planning.ExtractEquiJoinKeys$$anonfun$4.apply(patterns.scala:117)
      at org.apache.spark.sql.catalyst.planning.ExtractEquiJoinKeys$$anonfun$4.apply(patterns.scala:110)

More simple fix is just let `Literal.default` handle UDT by its sql type. So we can use more efficient join type on UDT.

Besides `except`, this also fixes other similar scenarios, so in summary this fixes:

* `except` on two Datasets with UDT
* `intersect` on two Datasets with UDT
* `Join` with the join conditions using `<=>` on UDT columns

## How was this patch tested?

Jenkins tests.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #16765 from viirya/df-except-for-udt.
2017-02-04 15:57:56 -08:00
hyukjinkwon 2f3c20bbdd [SPARK-19446][SQL] Remove unused findTightestCommonType in TypeCoercion
## What changes were proposed in this pull request?

This PR proposes to

- remove unused `findTightestCommonType` in `TypeCoercion` as suggested in https://github.com/apache/spark/pull/16777#discussion_r99283834
- rename `findTightestCommonTypeOfTwo ` to `findTightestCommonType`.
- fix comments accordingly

The usage was removed while refactoring/fixing in several JIRAs such as SPARK-16714, SPARK-16735 and SPARK-16646

## How was this patch tested?

Existing tests.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16786 from HyukjinKwon/SPARK-19446.
2017-02-03 22:10:17 -08:00
Dongjoon Hyun 52d4f61941 [SPARK-18909][SQL] The error messages in ExpressionEncoder.toRow/fromRow are too verbose
## What changes were proposed in this pull request?

In `ExpressionEncoder.toRow` and `fromRow`, we catch the exception and output `treeString` of serializer/deserializer expressions in the error message. However, encoder can be very complex and the serializer/deserializer expressions can be very large trees and blow up the log files(e.g. generate over 500mb logs for this single error message.) As a first attempt, this PR try to use `simpleString` instead.

**BEFORE**

```scala
scala> :paste
// Entering paste mode (ctrl-D to finish)

case class TestCaseClass(value: Int)
import spark.implicits._
Seq(TestCaseClass(1)).toDS().collect()

// Exiting paste mode, now interpreting.

java.lang.RuntimeException: Error while decoding: java.lang.NullPointerException
newInstance(class TestCaseClass)
+- assertnotnull(input[0, int, false], - field (class: "scala.Int", name: "value"), - root class: "TestCaseClass")
   +- input[0, int, false]

  at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.fromRow(ExpressionEncoder.scala:303)
...
```

**AFTER**

```scala
...
// Exiting paste mode, now interpreting.

java.lang.RuntimeException: Error while decoding: java.lang.NullPointerException
newInstance(class TestCaseClass)
  at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.fromRow(ExpressionEncoder.scala:303)
...
```

## How was this patch tested?

Manual.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #16701 from dongjoon-hyun/SPARK-18909-EXPR-ERROR.
2017-02-03 20:26:53 +08:00
Liang-Chi Hsieh bf493686eb [SPARK-19411][SQL] Remove the metadata used to mark optional columns in merged Parquet schema for filter predicate pushdown
## What changes were proposed in this pull request?

There is a metadata introduced before to mark the optional columns in merged Parquet schema for filter predicate pushdown. As we upgrade to Parquet 1.8.2 which includes the fix for the pushdown of optional columns, we don't need this metadata now.

## How was this patch tested?

Jenkins tests.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #16756 from viirya/remove-optional-metadata.
2017-02-03 11:58:42 +01:00
Zheng RuiFeng b0985764f0 [SPARK-14352][SQL] approxQuantile should support multi columns
## What changes were proposed in this pull request?

1, add the multi-cols support based on current private api
2, add the multi-cols support to pyspark
## How was this patch tested?

unit tests

Author: Zheng RuiFeng <ruifengz@foxmail.com>
Author: Ruifeng Zheng <ruifengz@foxmail.com>

Closes #12135 from zhengruifeng/quantile4multicols.
2017-02-01 14:11:28 -08:00
hyukjinkwon 5ed397baa7 [SPARK-19296][SQL] Deduplicate url and table in JdbcUtils
## What changes were proposed in this pull request?

This PR deduplicates arguments, `url` and `table` in `JdbcUtils` with `JDBCOptions`.

It avoids to use duplicated arguments, for example, as below:

from

```scala
val jdbcOptions = new JDBCOptions(url, table, map)
JdbcUtils.saveTable(ds, url, table, jdbcOptions)
```

to

```scala
val jdbcOptions = new JDBCOptions(url, table, map)
JdbcUtils.saveTable(ds, jdbcOptions)
```

## How was this patch tested?

Running unit test in `JdbcSuite`/`JDBCWriteSuite`

Building with Scala 2.10 as below:

```
./dev/change-scala-version.sh 2.10
./build/mvn -Pyarn -Phadoop-2.4 -Dscala-2.10 -DskipTests clean package
```

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16753 from HyukjinKwon/SPARK-19296.
2017-02-01 09:43:35 -08:00
hyukjinkwon f1a1f2607d
[SPARK-19402][DOCS] Support LaTex inline formula correctly and fix warnings in Scala/Java APIs generation
## What changes were proposed in this pull request?

This PR proposes three things as below:

- Support LaTex inline-formula, `\( ... \)` in Scala API documentation
  It seems currently,

  ```
  \( ... \)
  ```

  are rendered as they are, for example,

  <img width="345" alt="2017-01-30 10 01 13" src="https://cloud.githubusercontent.com/assets/6477701/22423960/ab37d54a-e737-11e6-9196-4f6229c0189c.png">

  It seems mistakenly more backslashes were added.

- Fix warnings Scaladoc/Javadoc generation
  This PR fixes t two types of warnings as below:

  ```
  [warn] .../spark/sql/catalyst/src/main/scala/org/apache/spark/sql/Row.scala:335: Could not find any member to link for "UnsupportedOperationException".
  [warn]   /**
  [warn]   ^
  ```

  ```
  [warn] .../spark/sql/core/src/main/scala/org/apache/spark/sql/internal/VariableSubstitution.scala:24: Variable var undefined in comment for class VariableSubstitution in class VariableSubstitution
  [warn]  * `${var}`, `${system:var}` and `${env:var}`.
  [warn]      ^
  ```

- Fix Javadoc8 break
  ```
  [error] .../spark/mllib/target/java/org/apache/spark/ml/PredictionModel.java:7: error: reference not found
  [error]  *                       E.g., {link VectorUDT} for vector features.
  [error]                                       ^
  [error] .../spark/mllib/target/java/org/apache/spark/ml/PredictorParams.java:12: error: reference not found
  [error]    *                          E.g., {link VectorUDT} for vector features.
  [error]                                            ^
  [error] .../spark/mllib/target/java/org/apache/spark/ml/Predictor.java:10: error: reference not found
  [error]  *                       E.g., {link VectorUDT} for vector features.
  [error]                                       ^
  [error] .../spark/sql/hive/target/java/org/apache/spark/sql/hive/HiveAnalysis.java:5: error: reference not found
  [error]  * Note that, this rule must be run after {link PreprocessTableInsertion}.
  [error]                                                  ^
  ```

## How was this patch tested?

Manually via `sbt unidoc` and `jeykil build`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16741 from HyukjinKwon/warn-and-break.
2017-02-01 13:26:16 +00:00
Burak Yavuz 081b7addaf [SPARK-19378][SS] Ensure continuity of stateOperator and eventTime metrics even if there is no new data in trigger
## What changes were proposed in this pull request?

In StructuredStreaming, if a new trigger was skipped because no new data arrived, we suddenly report nothing for the metrics `stateOperator`. We could however easily report the metrics from `lastExecution` to ensure continuity of metrics.

## How was this patch tested?

Regression test in `StreamingQueryStatusAndProgressSuite`

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #16716 from brkyvz/state-agg.
2017-01-31 16:52:53 -08:00
gatorsmile f9156d2956 [SPARK-19406][SQL] Fix function to_json to respect user-provided options
### What changes were proposed in this pull request?
Currently, the function `to_json` allows users to provide options for generating JSON. However, it does not pass it to `JacksonGenerator`. Thus, it ignores the user-provided options. This PR is to fix it. Below is an example.

```Scala
val df = Seq(Tuple1(Tuple1(java.sql.Timestamp.valueOf("2015-08-26 18:00:00.0")))).toDF("a")
val options = Map("timestampFormat" -> "dd/MM/yyyy HH:mm")
df.select(to_json($"a", options)).show(false)
```
The current output is like
```
+--------------------------------------+
|structtojson(a)                       |
+--------------------------------------+
|{"_1":"2015-08-26T18:00:00.000-07:00"}|
+--------------------------------------+
```

After the fix, the output is like
```
+-------------------------+
|structtojson(a)          |
+-------------------------+
|{"_1":"26/08/2015 18:00"}|
+-------------------------+
```
### How was this patch tested?
Added test cases for both `from_json` and `to_json`

Author: gatorsmile <gatorsmile@gmail.com>

Closes #16745 from gatorsmile/toJson.
2017-01-30 18:38:14 -08:00
Liwei Lin ade075aed4 [SPARK-19385][SQL] During canonicalization, NOT(...(l, r)) should not expect such cases that l.hashcode > r.hashcode
## What changes were proposed in this pull request?

During canonicalization, `NOT(...(l, r))` should not expect such cases that `l.hashcode > r.hashcode`.

Take the rule `case NOT(GreaterThan(l, r)) if l.hashcode > r.hashcode` for example, it should never be matched since `GreaterThan(l, r)` itself would be re-written as `GreaterThan(r, l)` given `l.hashcode > r.hashcode` after canonicalization.

This patch consolidates rules like `case NOT(GreaterThan(l, r)) if l.hashcode > r.hashcode` and `case NOT(GreaterThan(l, r))`.

## How was this patch tested?

This patch expanded the `NOT` test case to cover both cases where:
- `l.hashcode > r.hashcode`
- `l.hashcode < r.hashcode`

Author: Liwei Lin <lwlin7@gmail.com>

Closes #16719 from lw-lin/canonicalize.
2017-01-29 13:00:50 -08:00
Dilip Biswal e2e7b12ce8 [SPARK-18872][SQL][TESTS] New test cases for EXISTS subquery
## What changes were proposed in this pull request?
This PR adds the first set of tests for EXISTS subquery.

File name                        | Brief description
------------------------| -----------------
exists-basic.sql              |Tests EXISTS and NOT EXISTS subqueries with both correlated and local predicates.
exists-within-and-or.sql|Tests EXISTS and NOT EXISTS subqueries embedded in AND or OR expression.

DB2 results are attached here as reference :

[exists-basic-db2.txt](https://github.com/apache/spark/files/733031/exists-basic-db2.txt)
[exists-and-or-db2.txt](https://github.com/apache/spark/files/733030/exists-and-or-db2.txt)

## How was this patch tested?
This patch is adding tests.

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #16710 from dilipbiswal/exist-basic.
2017-01-29 12:51:59 -08:00
Wenchen Fan f7c07db852 [SPARK-19152][SQL][FOLLOWUP] simplify CreateHiveTableAsSelectCommand
## What changes were proposed in this pull request?

After https://github.com/apache/spark/pull/16552 , `CreateHiveTableAsSelectCommand` becomes very similar to `CreateDataSourceTableAsSelectCommand`, and we can further simplify it by only creating table in the table-not-exist branch.

This PR also adds hive provider checking in DataStream reader/writer, which is missed in #16552

## How was this patch tested?

N/A

Author: Wenchen Fan <wenchen@databricks.com>

Closes #16693 from cloud-fan/minor.
2017-01-28 20:38:03 -08:00
gatorsmile cfcfc92f7b [SPARK-19359][SQL] Revert Clear useless path after rename a partition with upper-case by HiveExternalCatalog
### What changes were proposed in this pull request?

This PR is to revert the changes made in https://github.com/apache/spark/pull/16700. It could cause the data loss after partition rename, because we have a bug in the file renaming.

Not all the OSs have the same behaviors. For example, on mac OS, if we renaming a path from `.../tbl/a=5/b=6` to `.../tbl/A=5/B=6`. The result is `.../tbl/a=5/B=6`. The expected result is `.../tbl/A=5/B=6`. Thus, renaming on mac OS is not recursive. However, the systems used in Jenkin does not have such an issue. Although this PR is not the root cause, it exposes an existing issue on the code `tablePath.getFileSystem(hadoopConf).rename(wrongPath, rightPath)`

---

Hive metastore is not case preserving and keep partition columns with lower case names.

If SparkSQL create a table with upper-case partion name use HiveExternalCatalog, when we rename partition, it first call the HiveClient to renamePartition, which will create a new lower case partition path, then SparkSql rename the lower case path to the upper-case.

while if the renamed partition contains more than one depth partition ,e.g. A=1/B=2, hive renamePartition change to a=1/b=2, then SparkSql rename it to A=1/B=2, but the a=1 still exists in the filesystem, we should also delete it.

### How was this patch tested?
N/A

Author: gatorsmile <gatorsmile@gmail.com>

Closes #16728 from gatorsmile/revert-pr-16700.
2017-01-28 13:32:30 -08:00
windpiger 1b5ee2003c [SPARK-19359][SQL] clear useless path after rename a partition with upper-case by HiveExternalCatalog
## What changes were proposed in this pull request?

Hive metastore is not case preserving and keep partition columns with lower case names.

If SparkSQL create a table with upper-case partion name use HiveExternalCatalog, when we rename partition, it first call the HiveClient to renamePartition, which will create a new lower case partition path, then SparkSql rename the lower case path to the upper-case.

while if the renamed partition contains more than one depth partition ,e.g. A=1/B=2, hive renamePartition change to a=1/b=2, then SparkSql rename it to A=1/B=2, but the a=1 still exists in the filesystem, we should also delete it.

## How was this patch tested?
unit test added

Author: windpiger <songjun@outlook.com>

Closes #16700 from windpiger/clearUselessPathAfterRenamPartition.
2017-01-27 17:17:17 -08:00
hyukjinkwon 4e35c5a3d3
[SPARK-12970][DOCS] Fix the example in SturctType APIs for Scala and Java
## What changes were proposed in this pull request?

This PR fixes both,

javadoc8 break

```
[error] .../spark/sql/hive/target/java/org/apache/spark/sql/hive/FindHiveSerdeTable.java:3: error: reference not found
[error]  * Replaces {link SimpleCatalogRelation} with {link MetastoreRelation} if its table provider is hive.
```

and the example in `StructType` as a self-contained example as below:

```scala
import org.apache.spark.sql._
import org.apache.spark.sql.types._

val struct =
  StructType(
    StructField("a", IntegerType, true) ::
    StructField("b", LongType, false) ::
    StructField("c", BooleanType, false) :: Nil)

// Extract a single StructField.
val singleField = struct("b")
// singleField: StructField = StructField(b,LongType,false)

// If this struct does not have a field called "d", it throws an exception.
struct("d")
// java.lang.IllegalArgumentException: Field "d" does not exist.
//   ...

// Extract multiple StructFields. Field names are provided in a set.
// A StructType object will be returned.
val twoFields = struct(Set("b", "c"))
// twoFields: StructType =
//   StructType(StructField(b,LongType,false), StructField(c,BooleanType,false))

// Any names without matching fields will throw an exception.
// For the case shown below, an exception is thrown due to "d".
struct(Set("b", "c", "d"))
// java.lang.IllegalArgumentException: Field "d" does not exist.
//    ...
```

```scala
import org.apache.spark.sql._
import org.apache.spark.sql.types._

val innerStruct =
  StructType(
    StructField("f1", IntegerType, true) ::
    StructField("f2", LongType, false) ::
    StructField("f3", BooleanType, false) :: Nil)

val struct = StructType(
  StructField("a", innerStruct, true) :: Nil)

// Create a Row with the schema defined by struct
val row = Row(Row(1, 2, true))
```

Also, now when the column is missing, it throws an exception rather than ignoring.

## How was this patch tested?

Manually via `sbt unidoc`.

- Scaladoc

  <img width="665" alt="2017-01-26 12 54 13" src="https://cloud.githubusercontent.com/assets/6477701/22297905/1245620e-e362-11e6-9e22-43bb8d9871af.png">

- Javadoc

  <img width="722" alt="2017-01-26 12 54 27" src="https://cloud.githubusercontent.com/assets/6477701/22297899/0fd87e0c-e362-11e6-9033-7590bda1aea6.png">

  <img width="702" alt="2017-01-26 12 54 32" src="https://cloud.githubusercontent.com/assets/6477701/22297900/0fe14154-e362-11e6-9882-768381c53163.png">

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16703 from HyukjinKwon/SPARK-12970.
2017-01-27 10:06:54 +00:00
Takeshi YAMAMURO 9f523d3192 [SPARK-19338][SQL] Add UDF names in explain
## What changes were proposed in this pull request?
This pr added a variable for a UDF name in `ScalaUDF`.
Then, if the variable filled, `DataFrame#explain` prints the name.

## How was this patch tested?
Added a test in `UDFSuite`.

Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>

Closes #16707 from maropu/SPARK-19338.
2017-01-26 09:50:42 -08:00
Takuya UESHIN 2969fb4370 [SPARK-18936][SQL] Infrastructure for session local timezone support.
## What changes were proposed in this pull request?

As of Spark 2.1, Spark SQL assumes the machine timezone for datetime manipulation, which is bad if users are not in the same timezones as the machines, or if different users have different timezones.

We should introduce a session local timezone setting that is used for execution.

An explicit non-goal is locale handling.

### Semantics

Setting the session local timezone means that the timezone-aware expressions listed below should use the timezone to evaluate values, and also it should be used to convert (cast) between string and timestamp or between timestamp and date.

- `CurrentDate`
- `CurrentBatchTimestamp`
- `Hour`
- `Minute`
- `Second`
- `DateFormatClass`
- `ToUnixTimestamp`
- `UnixTimestamp`
- `FromUnixTime`

and below are implicitly timezone-aware through cast from timestamp to date:

- `DayOfYear`
- `Year`
- `Quarter`
- `Month`
- `DayOfMonth`
- `WeekOfYear`
- `LastDay`
- `NextDay`
- `TruncDate`

For example, if you have timestamp `"2016-01-01 00:00:00"` in `GMT`, the values evaluated by some of timezone-aware expressions are:

```scala
scala> val df = Seq(new java.sql.Timestamp(1451606400000L)).toDF("ts")
df: org.apache.spark.sql.DataFrame = [ts: timestamp]

scala> df.selectExpr("cast(ts as string)", "year(ts)", "month(ts)", "dayofmonth(ts)", "hour(ts)", "minute(ts)", "second(ts)").show(truncate = false)
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
|ts                 |year(CAST(ts AS DATE))|month(CAST(ts AS DATE))|dayofmonth(CAST(ts AS DATE))|hour(ts)|minute(ts)|second(ts)|
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
|2016-01-01 00:00:00|2016                  |1                      |1                           |0       |0         |0         |
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
```

whereas setting the session local timezone to `"PST"`, they are:

```scala
scala> spark.conf.set("spark.sql.session.timeZone", "PST")

scala> df.selectExpr("cast(ts as string)", "year(ts)", "month(ts)", "dayofmonth(ts)", "hour(ts)", "minute(ts)", "second(ts)").show(truncate = false)
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
|ts                 |year(CAST(ts AS DATE))|month(CAST(ts AS DATE))|dayofmonth(CAST(ts AS DATE))|hour(ts)|minute(ts)|second(ts)|
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
|2015-12-31 16:00:00|2015                  |12                     |31                          |16      |0         |0         |
+-------------------+----------------------+-----------------------+----------------------------+--------+----------+----------+
```

Notice that even if you set the session local timezone, it affects only in `DataFrame` operations, neither in `Dataset` operations, `RDD` operations nor in `ScalaUDF`s. You need to properly handle timezone by yourself.

### Design of the fix

I introduced an analyzer to pass session local timezone to timezone-aware expressions and modified DateTimeUtils to take the timezone argument.

## How was this patch tested?

Existing tests and added tests for timezone aware expressions.

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #16308 from ueshin/issues/SPARK-18350.
2017-01-26 11:51:05 +01:00
Dilip Biswal 9effc2cdcb [TESTS][SQL] Setup testdata at the beginning for tests to run independently
## What changes were proposed in this pull request?

In CachedTableSuite, we are not setting up the test data at the beginning. Some tests fail while trying to run individually. When running the entire suite they run fine.

Here are some of the tests that fail -

- test("SELECT star from cached table")
- test("Self-join cached")

As part of this simplified a couple of tests by calling a support method to count the number of
InMemoryRelations.

## How was this patch tested?

Ran the failing tests individually.

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #16688 from dilipbiswal/cachetablesuite_simple.
2017-01-25 21:50:45 -08:00
gmoehler f6480b1467 [SPARK-19311][SQL] fix UDT hierarchy issue
## What changes were proposed in this pull request?
acceptType() in UDT will no only accept the same type but also all base types

## How was this patch tested?
Manual test using a set of generated UDTs fixing acceptType() in my user defined types

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: gmoehler <moehler@de.ibm.com>

Closes #16660 from gmoehler/master.
2017-01-25 08:17:24 -08:00
Nattavut Sutyanyong f1ddca5fcc [SPARK-18863][SQL] Output non-aggregate expressions without GROUP BY in a subquery does not yield an error
## What changes were proposed in this pull request?
This PR will report proper error messages when a subquery expression contain an invalid plan. This problem is fixed by calling CheckAnalysis for the plan inside a subquery.

## How was this patch tested?
Existing tests and two new test cases on 2 forms of subquery, namely, scalar subquery and in/exists subquery.

````
-- TC 01.01
-- The column t2b in the SELECT of the subquery is invalid
-- because it is neither an aggregate function nor a GROUP BY column.
select t1a, t2b
from   t1, t2
where  t1b = t2c
and    t2b = (select max(avg)
              from   (select   t2b, avg(t2b) avg
                      from     t2
                      where    t2a = t1.t1b
                     )
             )
;

-- TC 01.02
-- Invalid due to the column t2b not part of the output from table t2.
select *
from   t1
where  t1a in (select   min(t2a)
               from     t2
               group by t2c
               having   t2c in (select   max(t3c)
                                from     t3
                                group by t3b
                                having   t3b > t2b ))
;
````

Author: Nattavut Sutyanyong <nsy.can@gmail.com>

Closes #16572 from nsyca/18863.
2017-01-25 17:04:36 +01:00
Kousuke Saruta 15ef3740de [SPARK-19334][SQL] Fix the code injection vulnerability related to Generator functions.
## What changes were proposed in this pull request?

Similar to SPARK-15165, codegen is in danger of arbitrary code injection. The root cause is how variable names are created by codegen.
In GenerateExec#codeGenAccessor, a variable name is created like as follows.

```
val value = ctx.freshName(name)
```

The variable `value` is named based on the value of the variable `name` and the value of `name` is from schema given by users so an attacker can attack with queries like as follows.

```
SELECT inline(array(cast(struct(1) AS struct<`=new Object() { {f();} public void f() {throw new RuntimeException("This exception is injected.");} public int x;}.x`:int>)))
```

In the example above, a RuntimeException is thrown but an attacker can replace it with arbitrary code.

## How was this patch tested?

Added a new test case.

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #16681 from sarutak/SPARK-19334.
2017-01-24 23:35:23 +01:00
Nattavut Sutyanyong cdb691eb4d [SPARK-19017][SQL] NOT IN subquery with more than one column may return incorrect results
## What changes were proposed in this pull request?

This PR fixes the code in Optimizer phase where the NULL-aware expression of a NOT IN query is expanded in Rule `RewritePredicateSubquery`.

Example:
The query

 select a1,b1
 from   t1
 where  (a1,b1) not in (select a2,b2
                        from   t2);

has the (a1, b1) = (a2, b2) rewritten from (before this fix):

Join LeftAnti, ((isnull((_1#2 = a2#16)) || isnull((_2#3 = b2#17))) || ((_1#2 = a2#16) && (_2#3 = b2#17)))

to (after this fix):

Join LeftAnti, (((_1#2 = a2#16) || isnull((_1#2 = a2#16))) && ((_2#3 = b2#17) || isnull((_2#3 = b2#17))))

## How was this patch tested?

sql/test, catalyst/test and new test cases in SQLQueryTestSuite.

Author: Nattavut Sutyanyong <nsy.can@gmail.com>

Closes #16467 from nsyca/19017.
2017-01-24 23:31:06 +01:00
Wenchen Fan 59c184e028 [SPARK-17913][SQL] compare atomic and string type column may return confusing result
## What changes were proposed in this pull request?

Spark SQL follows MySQL to do the implicit type conversion for binary comparison: http://dev.mysql.com/doc/refman/5.7/en/type-conversion.html

However, this may return confusing result, e.g. `1 = 'true'` will return true, `19157170390056973L = '19157170390056971'` will return true.

I think it's more reasonable to follow postgres in this case, i.e. cast string to the type of the other side, but return null if the string is not castable to keep hive compatibility.

## How was this patch tested?

newly added tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #15880 from cloud-fan/compare.
2017-01-24 10:18:25 -08:00
windpiger 752502be05 [SPARK-19246][SQL] CataLogTable's partitionSchema order and exist check
## What changes were proposed in this pull request?

CataLogTable's partitionSchema should check if each column name in partitionColumnNames must match one and only one field in schema, if not we should throw an exception

and CataLogTable's partitionSchema should keep order with partitionColumnNames

## How was this patch tested?
N/A

Author: windpiger <songjun@outlook.com>

Closes #16606 from windpiger/checkPartionColNameWithSchema.
2017-01-24 20:49:23 +08:00
windpiger 3c86fdddf4 [SPARK-19152][SQL] DataFrameWriter.saveAsTable support hive append
## What changes were proposed in this pull request?

After [SPARK-19107](https://issues.apache.org/jira/browse/SPARK-19107), we now can treat hive as a data source and create hive tables with DataFrameWriter and Catalog. However, the support is not completed, there are still some cases we do not support.

This PR implement:
DataFrameWriter.saveAsTable work with hive format with append mode

## How was this patch tested?
unit test added

Author: windpiger <songjun@outlook.com>

Closes #16552 from windpiger/saveAsTableWithHiveAppend.
2017-01-24 20:40:27 +08:00
hyukjinkwon ec9493b445 [SPARK-16101][HOTFIX] Fix the build with Scala 2.10 by explicit typed argument
## What changes were proposed in this pull request?

I goofed in https://github.com/apache/spark/pull/16669 which introduces the break in scala 2.10.

This fixes

```bash
[error] /home/jenkins/workspace/spark-master-compile-sbt-scala-2.10/sql/core/src/main/scala/org/apache/spark/sql/execution/datasources/csv/UnivocityParser.scala:65: polymorphic expression cannot be instantiated to expected type;
[error]  found   : [B >: org.apache.spark.sql.types.StructField](B, Int) => Int
[error]  required: org.apache.spark.sql.types.StructField => ?
[error]     fields.map(schema.indexOf).toArray
[error]                       ^
[error] one error found
[error] (sql/compile:compileIncremental) Compilation failed
```

## How was this patch tested?

Manually via

```bash
./dev/change-scala-version.sh 2.10
./build/mvn -Pyarn -Phadoop-2.4 -Dscala-2.10 -DskipTests clean package
```
```
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Spark Project Parent POM ........................... SUCCESS [  2.719 s]
[INFO] Spark Project Tags ................................. SUCCESS [  3.441 s]
[INFO] Spark Project Sketch ............................... SUCCESS [  3.411 s]
[INFO] Spark Project Networking ........................... SUCCESS [  5.088 s]
[INFO] Spark Project Shuffle Streaming Service ............ SUCCESS [  5.131 s]
[INFO] Spark Project Unsafe ............................... SUCCESS [  5.813 s]
[INFO] Spark Project Launcher ............................. SUCCESS [  6.567 s]
[INFO] Spark Project Core ................................. SUCCESS [01:39 min]
[INFO] Spark Project ML Local Library ..................... SUCCESS [  6.644 s]
[INFO] Spark Project GraphX ............................... SUCCESS [ 11.304 s]
[INFO] Spark Project Streaming ............................ SUCCESS [ 26.275 s]
[INFO] Spark Project Catalyst ............................. SUCCESS [01:04 min]
[INFO] Spark Project SQL .................................. SUCCESS [02:07 min]
[INFO] Spark Project ML Library ........................... SUCCESS [01:20 min]
[INFO] Spark Project Tools ................................ SUCCESS [  8.755 s]
[INFO] Spark Project Hive ................................. SUCCESS [ 51.141 s]
[INFO] Spark Project REPL ................................. SUCCESS [ 13.688 s]
[INFO] Spark Project YARN Shuffle Service ................. SUCCESS [  7.211 s]
[INFO] Spark Project YARN ................................. SUCCESS [ 10.908 s]
[INFO] Spark Project Assembly ............................. SUCCESS [  2.940 s]
[INFO] Spark Project External Flume Sink .................. SUCCESS [  4.386 s]
[INFO] Spark Project External Flume ....................... SUCCESS [  8.589 s]
[INFO] Spark Project External Flume Assembly .............. SUCCESS [  1.891 s]
[INFO] Spark Integration for Kafka 0.8 .................... SUCCESS [  8.458 s]
[INFO] Spark Project Examples ............................. SUCCESS [ 17.706 s]
[INFO] Spark Project External Kafka Assembly .............. SUCCESS [  3.070 s]
[INFO] Spark Integration for Kafka 0.10 ................... SUCCESS [ 11.227 s]
[INFO] Spark Integration for Kafka 0.10 Assembly .......... SUCCESS [  2.982 s]
[INFO] Kafka 0.10 Source for Structured Streaming ......... SUCCESS [  7.494 s]
[INFO] Spark Project Java 8 Tests ......................... SUCCESS [  3.748 s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
```

and manual test `CSVSuite` with Scala 2.11 with my IDE.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16684 from HyukjinKwon/hot-fix-type-ensurance.
2017-01-23 23:57:22 -08:00
Shixiong Zhu 60bd91a340 [SPARK-19268][SS] Disallow adaptive query execution for streaming queries
## What changes were proposed in this pull request?

As adaptive query execution may change the number of partitions in different batches, it may break streaming queries. Hence, we should disallow this feature in Structured Streaming.

## How was this patch tested?

`test("SPARK-19268: Adaptive query execution should be disallowed")`.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16683 from zsxwing/SPARK-19268.
2017-01-23 22:30:51 -08:00
hyukjinkwon e576c1ed79 [SPARK-9435][SQL] Reuse function in Java UDF to correctly support expressions that require equality comparison between ScalaUDF
## What changes were proposed in this pull request?

Currently, running the codes in Java

```java
spark.udf().register("inc", new UDF1<Long, Long>() {
  Override
  public Long call(Long i) {
    return i + 1;
  }
}, DataTypes.LongType);

spark.range(10).toDF("x").createOrReplaceTempView("tmp");
Row result = spark.sql("SELECT inc(x) FROM tmp GROUP BY inc(x)").head();
Assert.assertEquals(7, result.getLong(0));
```

fails as below:

```
org.apache.spark.sql.AnalysisException: expression 'tmp.`x`' is neither present in the group by, nor is it an aggregate function. Add to group by or wrap in first() (or first_value) if you don't care which value you get.;;
Aggregate [UDF(x#19L)], [UDF(x#19L) AS UDF(x)#23L]
+- SubqueryAlias tmp, `tmp`
   +- Project [id#16L AS x#19L]
      +- Range (0, 10, step=1, splits=Some(8))

	at org.apache.spark.sql.catalyst.analysis.CheckAnalysis$class.failAnalysis(CheckAnalysis.scala:40)
	at org.apache.spark.sql.catalyst.analysis.Analyzer.failAnalysis(Analyzer.scala:57)
```

The root cause is because we were creating the function every time when it needs to build as below:

```scala
scala> def inc(i: Int) = i + 1
inc: (i: Int)Int

scala> (inc(_: Int)).hashCode
res15: Int = 1231799381

scala> (inc(_: Int)).hashCode
res16: Int = 2109839984

scala> (inc(_: Int)) == (inc(_: Int))
res17: Boolean = false
```

This seems leading to the comparison failure between `ScalaUDF`s created from Java UDF API, for example, in `Expression.semanticEquals`.

In case of Scala one, it seems already fine.

Both can be tested easily as below if any reviewer is more comfortable with Scala:

```scala
val df = Seq((1, 10), (2, 11), (3, 12)).toDF("x", "y")
val javaUDF = new UDF1[Int, Int]  {
  override def call(i: Int): Int = i + 1
}
// spark.udf.register("inc", javaUDF, IntegerType) // Uncomment this for Java API
// spark.udf.register("inc", (i: Int) => i + 1)    // Uncomment this for Scala API
df.createOrReplaceTempView("tmp")
spark.sql("SELECT inc(y) FROM tmp GROUP BY inc(y)").show()
```

## How was this patch tested?

Unit test in `JavaUDFSuite.java` and `./dev/lint-java`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16553 from HyukjinKwon/SPARK-9435.
2017-01-23 22:20:42 -08:00
jiangxingbo 3bdf3ee860 [SPARK-19272][SQL] Remove the param viewOriginalText from CatalogTable
## What changes were proposed in this pull request?

Hive will expand the view text, so it needs 2 fields: originalText and viewText. Since we don't expand the view text, but only add table properties, perhaps only a single field `viewText` is enough in CatalogTable.

This PR brought in the following changes:
1. Remove the param `viewOriginalText` from `CatalogTable`;
2. Update the output of command `DescribeTableCommand`.

## How was this patch tested?

Tested by exsiting test cases, also updated the failed test cases.

Author: jiangxingbo <jiangxb1987@gmail.com>

Closes #16679 from jiangxb1987/catalogTable.
2017-01-24 12:37:30 +08:00
Wenchen Fan fcfd5d0bba [SPARK-19290][SQL] add a new extending interface in Analyzer for post-hoc resolution
## What changes were proposed in this pull request?

To implement DDL commands, we added several analyzer rules in sql/hive module to analyze DDL related plans. However, our `Analyzer` currently only have one extending interface: `extendedResolutionRules`, which defines extra rules that will be run together with other rules in the resolution batch, and doesn't fit DDL rules well, because:

1. DDL rules may do some checking and normalization, but we may do it many times as the resolution batch will run rules again and again, until fixed point, and it's hard to tell if a DDL rule has already done its checking and normalization. It's fine because DDL rules are idempotent, but it's bad for analysis performance
2. some DDL rules may depend on others, and it's pretty hard to write `if` conditions to guarantee the dependencies. It will be good if we have a batch which run rules in one pass, so that we can guarantee the dependencies by rules order.

This PR adds a new extending interface in `Analyzer`: `postHocResolutionRules`, which defines rules that will be run only once in a batch runs right after the resolution batch.

## How was this patch tested?

existing tests

Author: Wenchen Fan <wenchen@databricks.com>

Closes #16645 from cloud-fan/analyzer.
2017-01-23 20:01:10 -08:00
windpiger 0ef1421a64 [SPARK-19284][SQL] append to partitioned datasource table should without custom partition location
## What changes were proposed in this pull request?

when we append data to a existed partitioned datasource table, the InsertIntoHadoopFsRelationCommand.getCustomPartitionLocations currently
return the same location with Hive default, it should return None.

## How was this patch tested?

Author: windpiger <songjun@outlook.com>

Closes #16642 from windpiger/appendSchema.
2017-01-23 19:06:04 +08:00
Dongjoon Hyun c4a6519c44 [SPARK-19218][SQL] Fix SET command to show a result correctly and in a sorted order
## What changes were proposed in this pull request?

This PR aims to fix the following two things.

1. `sql("SET -v").collect()` or `sql("SET -v").show()` raises the following exceptions for String configuration with default value, `null`. For the test, please see [Jenkins result](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/71539/testReport/) and 60953bf1f1 in #16624 .

```
sbt.ForkMain$ForkError: java.lang.RuntimeException: Error while decoding: java.lang.NullPointerException
createexternalrow(input[0, string, false].toString, input[1, string, false].toString, input[2, string, false].toString, StructField(key,StringType,false), StructField(value,StringType,false), StructField(meaning,StringType,false))
:- input[0, string, false].toString
:  +- input[0, string, false]
:- input[1, string, false].toString
:  +- input[1, string, false]
+- input[2, string, false].toString
   +- input[2, string, false]
```

2. Currently, `SET` and `SET -v` commands show unsorted result.
    We had better show a sorted result for UX. Also, this is compatible with Hive.

**BEFORE**
```
scala> sql("set").show(false)
...
|spark.driver.host              |10.22.16.140                                                                                                                                 |
|spark.driver.port              |63893                                                                                                                                        |
|spark.repl.class.uri           |spark://10.22.16.140:63893/classes                                                                                                           |
...
|spark.app.name                 |Spark shell                                                                                                                                  |
|spark.driver.memory            |4G                                                                                                                                           |
|spark.executor.id              |driver                                                                                                                                       |
|spark.submit.deployMode        |client                                                                                                                                       |
|spark.master                   |local[*]                                                                                                                                     |
|spark.home                     |/Users/dhyun/spark                                                                                                                           |
|spark.sql.catalogImplementation|hive                                                                                                                                         |
|spark.app.id                   |local-1484333618945                                                                                                                          |
```

**AFTER**

```
scala> sql("set").show(false)
...
|spark.app.id                   |local-1484333925649                                                                                                                          |
|spark.app.name                 |Spark shell                                                                                                                                  |
|spark.driver.host              |10.22.16.140                                                                                                                                 |
|spark.driver.memory            |4G                                                                                                                                           |
|spark.driver.port              |64994                                                                                                                                        |
|spark.executor.id              |driver                                                                                                                                       |
|spark.jars                     |                                                                                                                                             |
|spark.master                   |local[*]                                                                                                                                     |
|spark.repl.class.uri           |spark://10.22.16.140:64994/classes                                                                                                           |
|spark.sql.catalogImplementation|hive                                                                                                                                         |
|spark.submit.deployMode        |client                                                                                                                                       |
```

## How was this patch tested?

Jenkins with a new test case.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #16579 from dongjoon-hyun/SPARK-19218.
2017-01-23 01:21:44 -08:00
Wenchen Fan de6ad3dfa7 [SPARK-19309][SQL] disable common subexpression elimination for conditional expressions
## What changes were proposed in this pull request?

As I pointed out in https://github.com/apache/spark/pull/15807#issuecomment-259143655 , the current subexpression elimination framework has a problem, it always evaluates all common subexpressions at the beginning, even they are inside conditional expressions and may not be accessed.

Ideally we should implement it like scala lazy val, so we only evaluate it when it gets accessed at lease once. https://github.com/apache/spark/issues/15837 tries this approach, but it seems too complicated and may introduce performance regression.

This PR simply stops common subexpression elimination for conditional expressions, with some cleanup.

## How was this patch tested?

regression test

Author: Wenchen Fan <wenchen@databricks.com>

Closes #16659 from cloud-fan/codegen.
2017-01-23 13:31:26 +08:00
gatorsmile 772035e771 [SPARK-19229][SQL] Disallow Creating Hive Source Tables when Hive Support is Not Enabled
### What changes were proposed in this pull request?
It is weird to create Hive source tables when using InMemoryCatalog. We are unable to operate it. This PR is to block users to create Hive source tables.

### How was this patch tested?
Fixed the test cases

Author: gatorsmile <gatorsmile@gmail.com>

Closes #16587 from gatorsmile/blockHiveTable.
2017-01-22 20:37:37 -08:00
hyukjinkwon 74e65cb74a [SPARK-16101][SQL] Refactoring CSV read path to be consistent with JSON data source
## What changes were proposed in this pull request?

This PR refactors CSV read path to be consistent with JSON data source. It makes the methods in classes have consistent arguments with JSON ones.

`UnivocityParser` and `JacksonParser`

``` scala
private[csv] class UnivocityParser(
    schema: StructType,
    requiredSchema: StructType,
    options: CSVOptions) extends Logging {
  ...

def parse(input: String): Seq[InternalRow] = {
  ...
```

``` scala
class JacksonParser(
    schema: StructType,
    columnNameOfCorruptRecord: String,
    options: JSONOptions) extends Logging {
  ...

def parse(input: String): Option[InternalRow] = {
  ...
```

These allow parsing an iterator (`String` to `InternalRow`) as below for both JSON and CSV:

```scala
iter.flatMap(parser.parse)
```

## How was this patch tested?

Existing tests should cover this.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16669 from HyukjinKwon/SPARK-16101-read.
2017-01-23 12:23:12 +08:00
windpiger aa014eb74b [SPARK-19153][SQL] DataFrameWriter.saveAsTable work with create partitioned table
## What changes were proposed in this pull request?

After [SPARK-19107](https://issues.apache.org/jira/browse/SPARK-19153), we now can treat hive as a data source and create hive tables with DataFrameWriter and Catalog. However, the support is not completed, there are still some cases we do not support.

this PR provide DataFrameWriter.saveAsTable work with hive format to create partitioned table.

## How was this patch tested?
unit test added

Author: windpiger <songjun@outlook.com>

Closes #16593 from windpiger/saveAsTableWithPartitionedTable.
2017-01-22 11:41:27 +08:00
hyukjinkwon 6113fe78a5
[SPARK-19117][SPARK-18922][TESTS] Fix the rest of flaky, newly introduced and missed test failures on Windows
## What changes were proposed in this pull request?

**Failed tests**

```
org.apache.spark.sql.hive.execution.HiveQuerySuite:
 - transform with SerDe3 *** FAILED ***
 - transform with SerDe4 *** FAILED ***
```

```
org.apache.spark.sql.hive.execution.HiveDDLSuite:
 - create hive serde table with new syntax *** FAILED ***
 - add/drop partition with location - managed table *** FAILED ***
```

```
org.apache.spark.sql.hive.ParquetMetastoreSuite:
 - Explicitly added partitions should be readable after load *** FAILED ***
 - Non-partitioned table readable after load *** FAILED ***
```

**Aborted tests**

```
Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.execution.HiveSerDeSuite *** ABORTED *** (157 milliseconds)
   org.apache.spark.sql.AnalysisException: LOAD DATA input path does not exist: C:projectssparksqlhive   argetscala-2.11   est-classesdatafilessales.txt;
```

**Flaky tests(failed 9ish out of 10)**

```
org.apache.spark.scheduler.SparkListenerSuite:
 - local metrics *** FAILED ***
```

## How was this patch tested?

Manually tested via AppVeyor.

**Failed tests**

```
org.apache.spark.sql.hive.execution.HiveQuerySuite:
 - transform with SerDe3 !!! CANCELED !!! (0 milliseconds)
 - transform with SerDe4 !!! CANCELED !!! (0 milliseconds)
```

```
org.apache.spark.sql.hive.execution.HiveDDLSuite:
 - create hive serde table with new syntax (1 second, 672 milliseconds)
 - add/drop partition with location - managed table (2 seconds, 391 milliseconds)
```

```
org.apache.spark.sql.hive.ParquetMetastoreSuite:
 - Explicitly added partitions should be readable after load (609 milliseconds)
 - Non-partitioned table readable after load (344 milliseconds)
```

**Aborted tests**

```
spark.sql.hive.execution.HiveSerDeSuite:
 - Read with RegexSerDe (2 seconds, 142 milliseconds)
 - Read and write with LazySimpleSerDe (tab separated) (2 seconds)
 - Read with AvroSerDe (1 second, 47 milliseconds)
 - Read Partitioned with AvroSerDe (1 second, 422 milliseconds)
```

**Flaky tests (failed 9ish out of 10)**

```
org.apache.spark.scheduler.SparkListenerSuite:
 - local metrics (4 seconds, 562 milliseconds)
```

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16586 from HyukjinKwon/set-path-appveyor.
2017-01-21 14:08:01 +00:00
Wenchen Fan 3c2ba9fcc4 [SPARK-19305][SQL] partitioned table should always put partition columns at the end of table schema
## What changes were proposed in this pull request?

For data source tables, we will always reorder the specified table schema, or the query in CTAS, to put partition columns at the end. e.g. `CREATE TABLE t(a int, b int, c int, d int) USING parquet PARTITIONED BY (d, b)` will create a table with schema `<a, c, d, b>`

Hive serde tables don't have this problem before, because its CREATE TABLE syntax specifies data schema and partition schema individually.

However, after we unifed the CREATE TABLE syntax, Hive serde table also need to do the reorder. This PR puts the reorder logic in a analyzer rule,  which works with both data source tables and Hive serde tables.

## How was this patch tested?

new regression test

Author: Wenchen Fan <wenchen@databricks.com>

Closes #16655 from cloud-fan/schema.
2017-01-21 13:57:50 +08:00
sureshthalamati f174cdc747 [SPARK-14536][SQL] fix to handle null value in array type column for postgres.
## What changes were proposed in this pull request?

JDBC  read  is failing with  NPE due to missing null value check for array data type if the source table has null values in the array type column.  For null values Resultset.getArray()  returns null.
This PR adds null safe check to the Resultset.getArray() value before invoking method on the Array object.
## How was this patch tested?

Updated the PostgresIntegration test suite to test null values. Ran docker integration tests on my laptop.

Author: sureshthalamati <suresh.thalamati@gmail.com>

Closes #15192 from sureshthalamati/jdbc_array_null_fix-SPARK-14536.
2017-01-20 19:23:20 -08:00
hyukjinkwon 54268b42dc [SPARK-16101][SQL] Refactoring CSV write path to be consistent with JSON data source
## What changes were proposed in this pull request?

This PR refactors CSV write path to be consistent with JSON data source.

This PR makes the methods in classes have consistent arguments with JSON ones.
  - `UnivocityGenerator` and `JacksonGenerator`

    ``` scala
    private[csv] class UnivocityGenerator(
        schema: StructType,
        writer: Writer,
        options: CSVOptions = new CSVOptions(Map.empty[String, String])) {
    ...

    def write ...
    def close ...
    def flush ...
    ```

    ``` scala
    private[sql] class JacksonGenerator(
       schema: StructType,
       writer: Writer,
       options: JSONOptions = new JSONOptions(Map.empty[String, String])) {
    ...

    def write ...
    def close ...
    def flush ...
    ```

- This PR also makes the classes put in together in a consistent manner with JSON.
  - `CsvFileFormat`

    ``` scala
    CsvFileFormat
    CsvOutputWriter
    ```

  - `JsonFileFormat`

    ``` scala
    JsonFileFormat
    JsonOutputWriter
    ```

## How was this patch tested?

Existing tests should cover this.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16496 from HyukjinKwon/SPARK-16101-write.
2017-01-21 10:43:52 +08:00
Shixiong Zhu ea31f92bb8 [SPARK-19267][SS] Fix a race condition when stopping StateStore
## What changes were proposed in this pull request?

There is a race condition when stopping StateStore which makes `StateStoreSuite.maintenance` flaky. `StateStore.stop` doesn't wait for the running task to finish, and an out-of-date task may fail `doMaintenance` and cancel the new task. Here is a reproducer: dde1b5b106

This PR adds MaintenanceTask to eliminate the race condition.

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <shixiong@databricks.com>
Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #16627 from zsxwing/SPARK-19267.
2017-01-20 17:49:26 -08:00
Davies Liu 9b7a03f15a [SPARK-18589][SQL] Fix Python UDF accessing attributes from both side of join
## What changes were proposed in this pull request?

PythonUDF is unevaluable, which can not be used inside a join condition, currently the optimizer will push a PythonUDF which accessing both side of join into the join condition, then the query will fail to plan.

This PR fix this issue by checking the expression is evaluable  or not before pushing it into Join.

## How was this patch tested?

Add a regression test.

Author: Davies Liu <davies@databricks.com>

Closes #16581 from davies/pyudf_join.
2017-01-20 16:11:40 -08:00
Tathagata Das 552e5f0884 [SPARK-19314][SS][CATALYST] Do not allow sort before aggregation in Structured Streaming plan
## What changes were proposed in this pull request?

Sort in a streaming plan should be allowed only after a aggregation in complete mode. Currently it is incorrectly allowed when present anywhere in the plan. It gives unpredictable potentially incorrect results.

## How was this patch tested?
New test

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #16662 from tdas/SPARK-19314.
2017-01-20 14:04:51 -08:00
wangzhenhua 039ed9fe8a [SPARK-19271][SQL] Change non-cbo estimation of aggregate
## What changes were proposed in this pull request?

Change non-cbo estimation behavior of aggregate:
- If groupExpression is empty, we can know row count (=1) and the corresponding size;
- otherwise, estimation falls back to UnaryNode's computeStats method, which should not propagate rowCount and attributeStats in Statistics because they are not estimated in that method.

## How was this patch tested?

Added test case

Author: wangzhenhua <wangzhenhua@huawei.com>

Closes #16631 from wzhfy/aggNoCbo.
2017-01-19 22:18:47 -08:00
Wenchen Fan 0bf605c2c6 [SPARK-19292][SQL] filter with partition columns should be case-insensitive on Hive tables
## What changes were proposed in this pull request?

When we query a table with a filter on partitioned columns, we will push the partition filter to the metastore to get matched partitions directly.

In `HiveExternalCatalog.listPartitionsByFilter`, we assume the column names in partition filter are already normalized and we don't need to consider case sensitivity. However, `HiveTableScanExec` doesn't follow this assumption. This PR fixes it.

## How was this patch tested?

new regression test

Author: Wenchen Fan <wenchen@databricks.com>

Closes #16647 from cloud-fan/bug.
2017-01-19 20:09:48 -08:00
Kazuaki Ishizaki 148a84b370 [SPARK-17912] [SQL] Refactor code generation to get data for ColumnVector/ColumnarBatch
## What changes were proposed in this pull request?

This PR refactors the code generation part to get data from `ColumnarVector` and `ColumnarBatch` by using a trait `ColumnarBatchScan` for ease of reuse. This is because this part will be reused by several components (e.g. parquet reader, Dataset.cache, and others) since `ColumnarBatch` will be first citizen.

This PR is a part of https://github.com/apache/spark/pull/15219. In advance, this PR makes the code generation for  `ColumnarVector` and `ColumnarBatch` reuseable as a trait. In general, this is very useful for other components from the reuseability view, too.
## How was this patch tested?

tested existing test suites

Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>

Closes #15467 from kiszk/columnarrefactor.
2017-01-19 15:16:05 -08:00