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1912 commits

Author SHA1 Message Date
Takuya UESHIN b1b47274bf [SPARK-17702][SQL] Code generation including too many mutable states exceeds JVM size limit.
## What changes were proposed in this pull request?

Code generation including too many mutable states exceeds JVM size limit to extract values from `references` into fields in the constructor.
We should split the generated extractions in the constructor into smaller functions.

## How was this patch tested?

I added some tests to check if the generated codes for the expressions exceed or not.

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #15275 from ueshin/issues/SPARK-17702.
2016-10-03 21:48:58 -07:00
Herman van Hovell 2bbecdec20 [SPARK-17753][SQL] Allow a complex expression as the input a value based case statement
## What changes were proposed in this pull request?
We currently only allow relatively simple expressions as the input for a value based case statement. Expressions like `case (a > 1) or (b = 2) when true then 1 when false then 0 end` currently fail. This PR adds support for such expressions.

## How was this patch tested?
Added a test to the ExpressionParserSuite.

Author: Herman van Hovell <hvanhovell@databricks.com>

Closes #15322 from hvanhovell/SPARK-17753.
2016-10-03 19:32:59 -07:00
Zhenhua Wang 7bf9212764 [SPARK-17073][SQL] generate column-level statistics
## What changes were proposed in this pull request?

Generate basic column statistics for all the atomic types:
- numeric types: max, min, num of nulls, ndv (number of distinct values)
- date/timestamp types: they are also represented as numbers internally, so they have the same stats as above.
- string: avg length, max length, num of nulls, ndv
- binary: avg length, max length, num of nulls
- boolean: num of nulls, num of trues, num of falsies

Also support storing and loading these statistics.

One thing to notice:
We support analyzing columns independently, e.g.:
sql1: `ANALYZE TABLE src COMPUTE STATISTICS FOR COLUMNS key;`
sql2: `ANALYZE TABLE src COMPUTE STATISTICS FOR COLUMNS value;`
when running sql2 to collect column stats for `value`, we don’t remove stats of columns `key` which are analyzed in sql1 and not in sql2. As a result, **users need to guarantee consistency** between sql1 and sql2. If the table has been changed before sql2, users should re-analyze column `key` when they want to analyze column `value`:
`ANALYZE TABLE src COMPUTE STATISTICS FOR COLUMNS key, value;`

## How was this patch tested?

add unit tests

Author: Zhenhua Wang <wzh_zju@163.com>

Closes #15090 from wzhfy/colStats.
2016-10-03 10:12:02 -07:00
Dongjoon Hyun aef506e39a [SPARK-17739][SQL] Collapse adjacent similar Window operators
## What changes were proposed in this pull request?

Currently, Spark does not collapse adjacent windows with the same partitioning and sorting. This PR implements `CollapseWindow` optimizer to do the followings.

1. If the partition specs and order specs are the same, collapse into the parent.
2. If the partition specs are the same and one order spec is a prefix of the other, collapse to the more specific one.

For example:
```scala
val df = spark.range(1000).select($"id" % 100 as "grp", $"id", rand() as "col1", rand() as "col2")

// Add summary statistics for all columns
import org.apache.spark.sql.expressions.Window
val cols = Seq("id", "col1", "col2")
val window = Window.partitionBy($"grp").orderBy($"id")
val result = cols.foldLeft(df) { (base, name) =>
  base.withColumn(s"${name}_avg", avg(col(name)).over(window))
      .withColumn(s"${name}_stddev", stddev(col(name)).over(window))
      .withColumn(s"${name}_min", min(col(name)).over(window))
      .withColumn(s"${name}_max", max(col(name)).over(window))
}
```

**Before**
```scala
scala> result.explain
== Physical Plan ==
Window [max(col2#19) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col2_max#234], [grp#17L], [id#14L ASC NULLS FIRST]
+- Window [min(col2#19) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col2_min#216], [grp#17L], [id#14L ASC NULLS FIRST]
   +- Window [stddev_samp(col2#19) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col2_stddev#191], [grp#17L], [id#14L ASC NULLS FIRST]
      +- Window [avg(col2#19) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col2_avg#167], [grp#17L], [id#14L ASC NULLS FIRST]
         +- Window [max(col1#18) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col1_max#152], [grp#17L], [id#14L ASC NULLS FIRST]
            +- Window [min(col1#18) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col1_min#138], [grp#17L], [id#14L ASC NULLS FIRST]
               +- Window [stddev_samp(col1#18) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col1_stddev#117], [grp#17L], [id#14L ASC NULLS FIRST]
                  +- Window [avg(col1#18) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col1_avg#97], [grp#17L], [id#14L ASC NULLS FIRST]
                     +- Window [max(id#14L) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS id_max#86L], [grp#17L], [id#14L ASC NULLS FIRST]
                        +- Window [min(id#14L) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS id_min#76L], [grp#17L], [id#14L ASC NULLS FIRST]
                           +- *Project [grp#17L, id#14L, col1#18, col2#19, id_avg#26, id_stddev#42]
                              +- Window [stddev_samp(_w0#59) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS id_stddev#42], [grp#17L], [id#14L ASC NULLS FIRST]
                                 +- *Project [grp#17L, id#14L, col1#18, col2#19, id_avg#26, cast(id#14L as double) AS _w0#59]
                                    +- Window [avg(id#14L) windowspecdefinition(grp#17L, id#14L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS id_avg#26], [grp#17L], [id#14L ASC NULLS FIRST]
                                       +- *Sort [grp#17L ASC NULLS FIRST, id#14L ASC NULLS FIRST], false, 0
                                          +- Exchange hashpartitioning(grp#17L, 200)
                                             +- *Project [(id#14L % 100) AS grp#17L, id#14L, rand(-6329949029880411066) AS col1#18, rand(-7251358484380073081) AS col2#19]
                                                +- *Range (0, 1000, step=1, splits=Some(8))
```

**After**
```scala
scala> result.explain
== Physical Plan ==
Window [max(col2#5) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col2_max#220, min(col2#5) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col2_min#202, stddev_samp(col2#5) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col2_stddev#177, avg(col2#5) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col2_avg#153, max(col1#4) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col1_max#138, min(col1#4) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col1_min#124, stddev_samp(col1#4) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col1_stddev#103, avg(col1#4) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS col1_avg#83, max(id#0L) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS id_max#72L, min(id#0L) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS id_min#62L], [grp#3L], [id#0L ASC NULLS FIRST]
+- *Project [grp#3L, id#0L, col1#4, col2#5, id_avg#12, id_stddev#28]
   +- Window [stddev_samp(_w0#45) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS id_stddev#28], [grp#3L], [id#0L ASC NULLS FIRST]
      +- *Project [grp#3L, id#0L, col1#4, col2#5, id_avg#12, cast(id#0L as double) AS _w0#45]
         +- Window [avg(id#0L) windowspecdefinition(grp#3L, id#0L ASC NULLS FIRST, RANGE BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW) AS id_avg#12], [grp#3L], [id#0L ASC NULLS FIRST]
            +- *Sort [grp#3L ASC NULLS FIRST, id#0L ASC NULLS FIRST], false, 0
               +- Exchange hashpartitioning(grp#3L, 200)
                  +- *Project [(id#0L % 100) AS grp#3L, id#0L, rand(6537478539664068821) AS col1#4, rand(-8961093871295252795) AS col2#5]
                     +- *Range (0, 1000, step=1, splits=Some(8))
```

## How was this patch tested?

Pass the Jenkins tests with a newly added testsuite.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #15317 from dongjoon-hyun/SPARK-17739.
2016-09-30 21:05:06 -07:00
Takuya UESHIN 81455a9cd9 [SPARK-17703][SQL] Add unnamed version of addReferenceObj for minor objects.
## What changes were proposed in this pull request?

There are many minor objects in references, which are extracted to the generated class field, e.g. `errMsg` in `GetExternalRowField` or `ValidateExternalType`, but number of fields in class is limited so we should reduce the number.
This pr adds unnamed version of `addReferenceObj` for these minor objects not to store the object into field but refer it from the `references` field at the time of use.

## How was this patch tested?

Existing tests.

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #15276 from ueshin/issues/SPARK-17703.
2016-09-30 17:31:59 -07:00
Dongjoon Hyun 4ecc648ad7 [SPARK-17612][SQL] Support DESCRIBE table PARTITION SQL syntax
## What changes were proposed in this pull request?

This PR implements `DESCRIBE table PARTITION` SQL Syntax again. It was supported until Spark 1.6.2, but was dropped since 2.0.0.

**Spark 1.6.2**
```scala
scala> sql("CREATE TABLE partitioned_table (a STRING, b INT) PARTITIONED BY (c STRING, d STRING)")
res1: org.apache.spark.sql.DataFrame = [result: string]

scala> sql("ALTER TABLE partitioned_table ADD PARTITION (c='Us', d=1)")
res2: org.apache.spark.sql.DataFrame = [result: string]

scala> sql("DESC partitioned_table PARTITION (c='Us', d=1)").show(false)
+----------------------------------------------------------------+
|result                                                          |
+----------------------------------------------------------------+
|a                      string                                   |
|b                      int                                      |
|c                      string                                   |
|d                      string                                   |
|                                                                |
|# Partition Information                                         |
|# col_name             data_type               comment          |
|                                                                |
|c                      string                                   |
|d                      string                                   |
+----------------------------------------------------------------+
```

**Spark 2.0**
- **Before**
```scala
scala> sql("CREATE TABLE partitioned_table (a STRING, b INT) PARTITIONED BY (c STRING, d STRING)")
res0: org.apache.spark.sql.DataFrame = []

scala> sql("ALTER TABLE partitioned_table ADD PARTITION (c='Us', d=1)")
res1: org.apache.spark.sql.DataFrame = []

scala> sql("DESC partitioned_table PARTITION (c='Us', d=1)").show(false)
org.apache.spark.sql.catalyst.parser.ParseException:
Unsupported SQL statement
```

- **After**
```scala
scala> sql("CREATE TABLE partitioned_table (a STRING, b INT) PARTITIONED BY (c STRING, d STRING)")
res0: org.apache.spark.sql.DataFrame = []

scala> sql("ALTER TABLE partitioned_table ADD PARTITION (c='Us', d=1)")
res1: org.apache.spark.sql.DataFrame = []

scala> sql("DESC partitioned_table PARTITION (c='Us', d=1)").show(false)
+-----------------------+---------+-------+
|col_name               |data_type|comment|
+-----------------------+---------+-------+
|a                      |string   |null   |
|b                      |int      |null   |
|c                      |string   |null   |
|d                      |string   |null   |
|# Partition Information|         |       |
|# col_name             |data_type|comment|
|c                      |string   |null   |
|d                      |string   |null   |
+-----------------------+---------+-------+

scala> sql("DESC EXTENDED partitioned_table PARTITION (c='Us', d=1)").show(100,false)
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------+-------+
|col_name                                                                                                                                                                                                                                                                                                                                                                                                                                                                           |data_type|comment|
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------+-------+
|a                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |string   |null   |
|b                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |int      |null   |
|c                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |string   |null   |
|d                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |string   |null   |
|# Partition Information                                                                                                                                                                                                                                                                                                                                                                                                                                                            |         |       |
|# col_name                                                                                                                                                                                                                                                                                                                                                                                                                                                                         |data_type|comment|
|c                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |string   |null   |
|d                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |string   |null   |
|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   |         |       |
|Detailed Partition Information CatalogPartition(
        Partition Values: [Us, 1]
        Storage(Location: file:/Users/dhyun/SPARK-17612-DESC-PARTITION/spark-warehouse/partitioned_table/c=Us/d=1, InputFormat: org.apache.hadoop.mapred.TextInputFormat, OutputFormat: org.apache.hadoop.hive.ql.io.HiveIgnoreKeyTextOutputFormat, Serde: org.apache.hadoop.hive.serde2.lazy.LazySimpleSerDe, Properties: [serialization.format=1])
        Partition Parameters:{transient_lastDdlTime=1475001066})|         |       |
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+---------+-------+

scala> sql("DESC FORMATTED partitioned_table PARTITION (c='Us', d=1)").show(100,false)
+--------------------------------+---------------------------------------------------------------------------------------+-------+
|col_name                        |data_type                                                                              |comment|
+--------------------------------+---------------------------------------------------------------------------------------+-------+
|a                               |string                                                                                 |null   |
|b                               |int                                                                                    |null   |
|c                               |string                                                                                 |null   |
|d                               |string                                                                                 |null   |
|# Partition Information         |                                                                                       |       |
|# col_name                      |data_type                                                                              |comment|
|c                               |string                                                                                 |null   |
|d                               |string                                                                                 |null   |
|                                |                                                                                       |       |
|# Detailed Partition Information|                                                                                       |       |
|Partition Value:                |[Us, 1]                                                                                |       |
|Database:                       |default                                                                                |       |
|Table:                          |partitioned_table                                                                      |       |
|Location:                       |file:/Users/dhyun/SPARK-17612-DESC-PARTITION/spark-warehouse/partitioned_table/c=Us/d=1|       |
|Partition Parameters:           |                                                                                       |       |
|  transient_lastDdlTime         |1475001066                                                                             |       |
|                                |                                                                                       |       |
|# Storage Information           |                                                                                       |       |
|SerDe Library:                  |org.apache.hadoop.hive.serde2.lazy.LazySimpleSerDe                                     |       |
|InputFormat:                    |org.apache.hadoop.mapred.TextInputFormat                                               |       |
|OutputFormat:                   |org.apache.hadoop.hive.ql.io.HiveIgnoreKeyTextOutputFormat                             |       |
|Compressed:                     |No                                                                                     |       |
|Storage Desc Parameters:        |                                                                                       |       |
|  serialization.format          |1                                                                                      |       |
+--------------------------------+---------------------------------------------------------------------------------------+-------+
```

## How was this patch tested?

Pass the Jenkins tests with a new testcase.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #15168 from dongjoon-hyun/SPARK-17612.
2016-09-29 15:30:18 -07:00
Liang-Chi Hsieh 566d7f2827 [SPARK-17653][SQL] Remove unnecessary distincts in multiple unions
## What changes were proposed in this pull request?

Currently for `Union [Distinct]`, a `Distinct` operator is necessary to be on the top of `Union`. Once there are adjacent `Union [Distinct]`,  there will be multiple `Distinct` in the query plan.

E.g.,

For a query like: select 1 a union select 2 b union select 3 c

Before this patch, its physical plan looks like:

    *HashAggregate(keys=[a#13], functions=[])
    +- Exchange hashpartitioning(a#13, 200)
       +- *HashAggregate(keys=[a#13], functions=[])
          +- Union
             :- *HashAggregate(keys=[a#13], functions=[])
             :  +- Exchange hashpartitioning(a#13, 200)
             :     +- *HashAggregate(keys=[a#13], functions=[])
             :        +- Union
             :           :- *Project [1 AS a#13]
             :           :  +- Scan OneRowRelation[]
             :           +- *Project [2 AS b#14]
             :              +- Scan OneRowRelation[]
             +- *Project [3 AS c#15]
                +- Scan OneRowRelation[]

Only the top distinct should be necessary.

After this patch, the physical plan looks like:

    *HashAggregate(keys=[a#221], functions=[], output=[a#221])
    +- Exchange hashpartitioning(a#221, 5)
       +- *HashAggregate(keys=[a#221], functions=[], output=[a#221])
          +- Union
             :- *Project [1 AS a#221]
             :  +- Scan OneRowRelation[]
             :- *Project [2 AS b#222]
             :  +- Scan OneRowRelation[]
             +- *Project [3 AS c#223]
                +- Scan OneRowRelation[]

## How was this patch tested?

Jenkins tests.

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #15238 from viirya/remove-extra-distinct-union.
2016-09-29 14:30:23 -07:00
Michael Armbrust fe33121a53 [SPARK-17699] Support for parsing JSON string columns
Spark SQL has great support for reading text files that contain JSON data.  However, in many cases the JSON data is just one column amongst others.  This is particularly true when reading from sources such as Kafka.  This PR adds a new functions `from_json` that converts a string column into a nested `StructType` with a user specified schema.

Example usage:
```scala
val df = Seq("""{"a": 1}""").toDS()
val schema = new StructType().add("a", IntegerType)

df.select(from_json($"value", schema) as 'json) // => [json: <a: int>]
```

This PR adds support for java, scala and python.  I leveraged our existing JSON parsing support by moving it into catalyst (so that we could define expressions using it).  I left SQL out for now, because I'm not sure how users would specify a schema.

Author: Michael Armbrust <michael@databricks.com>

Closes #15274 from marmbrus/jsonParser.
2016-09-29 13:01:10 -07:00
Josh Rosen 37eb9184f1 [SPARK-17712][SQL] Fix invalid pushdown of data-independent filters beneath aggregates
## What changes were proposed in this pull request?

This patch fixes a minor correctness issue impacting the pushdown of filters beneath aggregates. Specifically, if a filter condition references no grouping or aggregate columns (e.g. `WHERE false`) then it would be incorrectly pushed beneath an aggregate.

Intuitively, the only case where you can push a filter beneath an aggregate is when that filter is deterministic and is defined over the grouping columns / expressions, since in that case the filter is acting to exclude entire groups from the query (like a `HAVING` clause). The existing code would only push deterministic filters beneath aggregates when all of the filter's references were grouping columns, but this logic missed the case where a filter has no references. For example, `WHERE false` is deterministic but is independent of the actual data.

This patch fixes this minor bug by adding a new check to ensure that we don't push filters beneath aggregates when those filters don't reference any columns.

## How was this patch tested?

New regression test in FilterPushdownSuite.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #15289 from JoshRosen/SPARK-17712.
2016-09-28 19:03:05 -07:00
Herman van Hovell 7d09232028 [SPARK-17641][SQL] Collect_list/Collect_set should not collect null values.
## What changes were proposed in this pull request?
We added native versions of `collect_set` and `collect_list` in Spark 2.0. These currently also (try to) collect null values, this is different from the original Hive implementation. This PR fixes this by adding a null check to the `Collect.update` method.

## How was this patch tested?
Added a regression test to `DataFrameAggregateSuite`.

Author: Herman van Hovell <hvanhovell@databricks.com>

Closes #15208 from hvanhovell/SPARK-17641.
2016-09-28 16:25:10 -07:00
Josh Rosen 2f84a68660 [SPARK-17618] Guard against invalid comparisons between UnsafeRow and other formats
This patch ports changes from #15185 to Spark 2.x. In that patch, a  correctness bug in Spark 1.6.x which was caused by an invalid `equals()` comparison between an `UnsafeRow` and another row of a different format. Spark 2.x is not affected by that specific correctness bug but it can still reap the error-prevention benefits of that patch's changes, which modify  ``UnsafeRow.equals()` to throw an IllegalArgumentException if it is called with an object that is not an `UnsafeRow`.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #15265 from JoshRosen/SPARK-17618-master.
2016-09-27 14:14:27 -07:00
Reynold Xin 120723f934 [SPARK-17682][SQL] Mark children as final for unary, binary, leaf expressions and plan nodes
## What changes were proposed in this pull request?
This patch marks the children method as final in unary, binary, and leaf expressions and plan nodes (both logical plan and physical plan), as brought up in http://apache-spark-developers-list.1001551.n3.nabble.com/Should-LeafExpression-have-children-final-override-like-Nondeterministic-td19104.html

## How was this patch tested?
This is a simple modifier change and has no impact on test coverage.

Author: Reynold Xin <rxin@databricks.com>

Closes #15256 from rxin/SPARK-17682.
2016-09-27 10:20:30 -07:00
Kazuaki Ishizaki 85b0a15754 [SPARK-15962][SQL] Introduce implementation with a dense format for UnsafeArrayData
## What changes were proposed in this pull request?

This PR introduces more compact representation for ```UnsafeArrayData```.

```UnsafeArrayData``` needs to accept ```null``` value in each entry of an array. In the current version, it has three parts
```
[numElements] [offsets] [values]
```
`Offsets` has the number of `numElements`, and represents `null` if its value is negative. It may increase memory footprint, and introduces an indirection for accessing each of `values`.

This PR uses bitvectors to represent nullability for each element like `UnsafeRow`, and eliminates an indirection for accessing each element. The new ```UnsafeArrayData``` has four parts.
```
[numElements][null bits][values or offset&length][variable length portion]
```
In the `null bits` region, we store 1 bit per element, represents whether an element is null. Its total size is ceil(numElements / 8) bytes, and it is aligned to 8-byte boundaries.
In the `values or offset&length` region, we store the content of elements. For fields that hold fixed-length primitive types, such as long, double, or int, we store the value directly in the field. For fields with non-primitive or variable-length values, we store a relative offset (w.r.t. the base address of the array) that points to the beginning of the variable-length field and length (they are combined into a long). Each is word-aligned. For `variable length portion`, each is aligned to 8-byte boundaries.

The new format can reduce memory footprint and improve performance of accessing each element. An example of memory foot comparison:
1024x1024 elements integer array
Size of ```baseObject``` for ```UnsafeArrayData```: 8 + 1024x1024 + 1024x1024 = 2M bytes
Size of ```baseObject``` for ```UnsafeArrayData```: 8 + 1024x1024/8 + 1024x1024 = 1.25M bytes

In summary, we got 1.0-2.6x performance improvements over the code before applying this PR.
Here are performance results of [benchmark programs](04d2e4b6db/sql/core/src/test/scala/org/apache/spark/sql/execution/benchmark/UnsafeArrayDataBenchmark.scala):

**Read UnsafeArrayData**: 1.7x and 1.6x performance improvements over the code before applying this PR
````
OpenJDK 64-Bit Server VM 1.8.0_91-b14 on Linux 4.4.11-200.fc22.x86_64
Intel Xeon E3-12xx v2 (Ivy Bridge)

Without SPARK-15962
Read UnsafeArrayData:                    Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
Int                                            430 /  436        390.0           2.6       1.0X
Double                                         456 /  485        367.8           2.7       0.9X

With SPARK-15962
Read UnsafeArrayData:                    Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
Int                                            252 /  260        666.1           1.5       1.0X
Double                                         281 /  292        597.7           1.7       0.9X
````
**Write UnsafeArrayData**: 1.0x and 1.1x performance improvements over the code before applying this PR
````
OpenJDK 64-Bit Server VM 1.8.0_91-b14 on Linux 4.0.4-301.fc22.x86_64
Intel Xeon E3-12xx v2 (Ivy Bridge)

Without SPARK-15962
Write UnsafeArrayData:                   Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
Int                                            203 /  273        103.4           9.7       1.0X
Double                                         239 /  356         87.9          11.4       0.8X

With SPARK-15962
Write UnsafeArrayData:                   Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
Int                                            196 /  249        107.0           9.3       1.0X
Double                                         227 /  367         92.3          10.8       0.9X
````

**Get primitive array from UnsafeArrayData**: 2.6x and 1.6x performance improvements over the code before applying this PR
````
OpenJDK 64-Bit Server VM 1.8.0_91-b14 on Linux 4.0.4-301.fc22.x86_64
Intel Xeon E3-12xx v2 (Ivy Bridge)

Without SPARK-15962
Get primitive array from UnsafeArrayData: Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
Int                                            207 /  217        304.2           3.3       1.0X
Double                                         257 /  363        245.2           4.1       0.8X

With SPARK-15962
Get primitive array from UnsafeArrayData: Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
Int                                            151 /  198        415.8           2.4       1.0X
Double                                         214 /  394        293.6           3.4       0.7X
````

**Create UnsafeArrayData from primitive array**: 1.7x and 2.1x performance improvements over the code before applying this PR
````
OpenJDK 64-Bit Server VM 1.8.0_91-b14 on Linux 4.0.4-301.fc22.x86_64
Intel Xeon E3-12xx v2 (Ivy Bridge)

Without SPARK-15962
Create UnsafeArrayData from primitive array: Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
Int                                            340 /  385        185.1           5.4       1.0X
Double                                         479 /  705        131.3           7.6       0.7X

With SPARK-15962
Create UnsafeArrayData from primitive array: Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
Int                                            206 /  211        306.0           3.3       1.0X
Double                                         232 /  406        271.6           3.7       0.9X
````

1.7x and 1.4x performance improvements in [```UDTSerializationBenchmark```](https://github.com/apache/spark/blob/master/mllib/src/test/scala/org/apache/spark/mllib/linalg/UDTSerializationBenchmark.scala)  over the code before applying this PR
````
OpenJDK 64-Bit Server VM 1.8.0_91-b14 on Linux 4.4.11-200.fc22.x86_64
Intel Xeon E3-12xx v2 (Ivy Bridge)

Without SPARK-15962
VectorUDT de/serialization:              Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
serialize                                      442 /  533          0.0      441927.1       1.0X
deserialize                                    217 /  274          0.0      217087.6       2.0X

With SPARK-15962
VectorUDT de/serialization:              Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
------------------------------------------------------------------------------------------------
serialize                                      265 /  318          0.0      265138.5       1.0X
deserialize                                    155 /  197          0.0      154611.4       1.7X
````

## How was this patch tested?

Added unit tests into ```UnsafeArraySuite```

Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>

Closes #13680 from kiszk/SPARK-15962.
2016-09-27 14:18:32 +08:00
xin wu de333d121d [SPARK-17551][SQL] Add DataFrame API for null ordering
## What changes were proposed in this pull request?
This pull request adds Scala/Java DataFrame API for null ordering (NULLS FIRST | LAST).

Also did some minor clean up for related code (e.g. incorrect indentation), and renamed "orderby-nulls-ordering.sql" to be consistent with existing test files.

## How was this patch tested?
Added a new test case in DataFrameSuite.

Author: petermaxlee <petermaxlee@gmail.com>
Author: Xin Wu <xinwu@us.ibm.com>

Closes #15123 from petermaxlee/SPARK-17551.
2016-09-25 16:46:12 -07:00
Herman van Hovell 0d63487502 [SPARK-17616][SQL] Support a single distinct aggregate combined with a non-partial aggregate
## What changes were proposed in this pull request?
We currently cannot execute an aggregate that contains a single distinct aggregate function and an one or more non-partially plannable aggregate functions, for example:
```sql
select   grp,
         collect_list(col1),
         count(distinct col2)
from     tbl_a
group by 1
```
This is a regression from Spark 1.6. This is caused by the fact that the single distinct aggregation code path assumes that all aggregates can be planned in two phases (is partially aggregatable). This PR works around this issue by triggering the `RewriteDistinctAggregates` in such cases (this is similar to the approach taken in 1.6).

## How was this patch tested?
Created `RewriteDistinctAggregatesSuite` which checks if the aggregates with distinct aggregate functions get rewritten into two `Aggregates` and an `Expand`. Added a regression test to `DataFrameAggregateSuite`.

Author: Herman van Hovell <hvanhovell@databricks.com>

Closes #15187 from hvanhovell/SPARK-17616.
2016-09-22 14:29:27 -07:00
Wenchen Fan b50b34f561 [SPARK-17609][SQL] SessionCatalog.tableExists should not check temp view
## What changes were proposed in this pull request?

After #15054 , there is no place in Spark SQL that need `SessionCatalog.tableExists` to check temp views, so this PR makes `SessionCatalog.tableExists` only check permanent table/view and removes some hacks.

This PR also improves the `getTempViewOrPermanentTableMetadata` that is introduced in  #15054 , to make the code simpler.

## How was this patch tested?

existing tests

Author: Wenchen Fan <wenchen@databricks.com>

Closes #15160 from cloud-fan/exists.
2016-09-22 12:52:09 +08:00
Davies Liu 8bde03bf9a [SPARK-17494][SQL] changePrecision() on compact decimal should respect rounding mode
## What changes were proposed in this pull request?

Floor()/Ceil() of decimal is implemented using changePrecision() by passing a rounding mode, but the rounding mode is not respected when the decimal is in compact mode (could fit within a Long).

This Update the changePrecision() to respect rounding mode, which could be ROUND_FLOOR, ROUND_CEIL, ROUND_HALF_UP, ROUND_HALF_EVEN.

## How was this patch tested?

Added regression tests.

Author: Davies Liu <davies@databricks.com>

Closes #15154 from davies/decimal_round.
2016-09-21 21:02:30 -07:00
Liang-Chi Hsieh 248922fd4f [SPARK-17590][SQL] Analyze CTE definitions at once and allow CTE subquery to define CTE
## What changes were proposed in this pull request?

We substitute logical plan with CTE definitions in the analyzer rule CTESubstitution. A CTE definition can be used in the logical plan for multiple times, and its analyzed logical plan should be the same. We should not analyze CTE definitions multiple times when they are reused in the query.

By analyzing CTE definitions before substitution, we can support defining CTE in subquery.

## How was this patch tested?

Jenkins tests.

Author: Liang-Chi Hsieh <simonh@tw.ibm.com>

Closes #15146 from viirya/cte-analysis-once.
2016-09-21 06:53:42 -07:00
Sean Zhong 3977223a32 [SPARK-17617][SQL] Remainder(%) expression.eval returns incorrect result on double value
## What changes were proposed in this pull request?

Remainder(%) expression's `eval()` returns incorrect result when the dividend is a big double. The reason is that Remainder converts the double dividend to decimal to do "%", and that lose precision.

This bug only affects the `eval()` that is used by constant folding, the codegen path is not impacted.

### Before change
```
scala> -5083676433652386516D % 10
res2: Double = -6.0

scala> spark.sql("select -5083676433652386516D % 10 as a").show
+---+
|  a|
+---+
|0.0|
+---+
```

### After change
```
scala> spark.sql("select -5083676433652386516D % 10 as a").show
+----+
|   a|
+----+
|-6.0|
+----+
```

## How was this patch tested?

Unit test.

Author: Sean Zhong <seanzhong@databricks.com>

Closes #15171 from clockfly/SPARK-17617.
2016-09-21 16:53:34 +08:00
gatorsmile d5ec5dbb0d [SPARK-17502][SQL] Fix Multiple Bugs in DDL Statements on Temporary Views
### What changes were proposed in this pull request?
- When the permanent tables/views do not exist but the temporary view exists, the expected error should be `NoSuchTableException` for partition-related ALTER TABLE commands. However, it always reports a confusing error message. For example,
```
Partition spec is invalid. The spec (a, b) must match the partition spec () defined in table '`testview`';
```
- When the permanent tables/views do not exist but the temporary view exists, the expected error should be `NoSuchTableException` for `ALTER TABLE ... UNSET TBLPROPERTIES`. However, it reports a missing table property. For example,
```
Attempted to unset non-existent property 'p' in table '`testView`';
```
- When `ANALYZE TABLE` is called on a view or a temporary view, we should issue an error message. However, it reports a strange error:
```
ANALYZE TABLE is not supported for Project
```

- When inserting into a temporary view that is generated from `Range`, we will get the following error message:
```
assertion failed: No plan for 'InsertIntoTable Range (0, 10, step=1, splits=Some(1)), false, false
+- Project [1 AS 1#20]
   +- OneRowRelation$
```

This PR is to fix the above four issues.

### How was this patch tested?
Added multiple test cases

Author: gatorsmile <gatorsmile@gmail.com>

Closes #15054 from gatorsmile/tempViewDDL.
2016-09-20 20:11:48 +08:00
Josh Rosen e719b1c045 [SPARK-17160] Properly escape field names in code-generated error messages
This patch addresses a corner-case escaping bug where field names which contain special characters were unsafely interpolated into error message string literals in generated Java code, leading to compilation errors.

This patch addresses these issues by using `addReferenceObj` to store the error messages as string fields rather than inline string constants.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #15156 from JoshRosen/SPARK-17160.
2016-09-19 20:20:36 -07:00
Davies Liu d8104158a9 [SPARK-17100] [SQL] fix Python udf in filter on top of outer join
## What changes were proposed in this pull request?

In optimizer, we try to evaluate the condition to see whether it's nullable or not, but some expressions are not evaluable, we should check that before evaluate it.

## How was this patch tested?

Added regression tests.

Author: Davies Liu <davies@databricks.com>

Closes #15103 from davies/udf_join.
2016-09-19 13:24:16 -07:00
jiangxingbo 5d3f4615f8
[SPARK-17506][SQL] Improve the check double values equality rule.
## What changes were proposed in this pull request?

In `ExpressionEvalHelper`, we check the equality between two double values by comparing whether the expected value is within the range [target - tolerance, target + tolerance], but this can cause a negative false when the compared numerics are very large.
Before:
```
val1 = 1.6358558070241E306
val2 = 1.6358558070240974E306
ExpressionEvalHelper.compareResults(val1, val2)
false
```
In fact, `val1` and `val2` are but with different precisions, we should tolerant this case by comparing with percentage range, eg.,expected is within range [target - target * tolerance_percentage, target + target * tolerance_percentage].
After:
```
val1 = 1.6358558070241E306
val2 = 1.6358558070240974E306
ExpressionEvalHelper.compareResults(val1, val2)
true
```

## How was this patch tested?

Exsiting testcases.

Author: jiangxingbo <jiangxb1987@gmail.com>

Closes #15059 from jiangxb1987/deq.
2016-09-18 16:04:37 +01:00
Wenchen Fan 3fe630d314 [SPARK-17541][SQL] fix some DDL bugs about table management when same-name temp view exists
## What changes were proposed in this pull request?

In `SessionCatalog`, we have several operations(`tableExists`, `dropTable`, `loopupRelation`, etc) that handle both temp views and metastore tables/views. This brings some bugs to DDL commands that want to handle temp view only or metastore table/view only. These bugs are:

1. `CREATE TABLE USING` will fail if a same-name temp view exists
2. `Catalog.dropTempView`will un-cache and drop metastore table if a same-name table exists
3. `saveAsTable` will fail or have unexpected behaviour if a same-name temp view exists.

These bug fixes are pulled out from https://github.com/apache/spark/pull/14962 and targets both master and 2.0 branch

## How was this patch tested?

new regression tests

Author: Wenchen Fan <wenchen@databricks.com>

Closes #15099 from cloud-fan/fix-view.
2016-09-18 21:15:35 +08:00
hyukjinkwon 86c2d393a5
[SPARK-17480][SQL][FOLLOWUP] Fix more instances which calls List.length/size which is O(n)
## What changes were proposed in this pull request?

This PR fixes all the instances which was fixed in the previous PR.

To make sure, I manually debugged and also checked the Scala source. `length` in [LinearSeqOptimized.scala#L49-L57](https://github.com/scala/scala/blob/2.11.x/src/library/scala/collection/LinearSeqOptimized.scala#L49-L57) is O(n). Also, `size` calls `length` via [SeqLike.scala#L106](https://github.com/scala/scala/blob/2.11.x/src/library/scala/collection/SeqLike.scala#L106).

For debugging, I have created these as below:

```scala
ArrayBuffer(1, 2, 3)
Array(1, 2, 3)
List(1, 2, 3)
Seq(1, 2, 3)
```

and then called `size` and `length` for each to debug.

## How was this patch tested?

I ran the bash as below on Mac

```bash
find . -name *.scala -type f -exec grep -il "while (.*\\.length)" {} \; | grep "src/main"
find . -name *.scala -type f -exec grep -il "while (.*\\.size)" {} \; | grep "src/main"
```

and then checked each.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #15093 from HyukjinKwon/SPARK-17480-followup.
2016-09-17 16:52:30 +01:00
Marcelo Vanzin 39e2bad6a8 [SPARK-17549][SQL] Only collect table size stat in driver for cached relation.
The existing code caches all stats for all columns for each partition
in the driver; for a large relation, this causes extreme memory usage,
which leads to gc hell and application failures.

It seems that only the size in bytes of the data is actually used in the
driver, so instead just colllect that. In executors, the full stats are
still kept, but that's not a big problem; we expect the data to be distributed
and thus not really incur in too much memory pressure in each individual
executor.

There are also potential improvements on the executor side, since the data
being stored currently is very wasteful (e.g. storing boxed types vs.
primitive types for stats). But that's a separate issue.

On a mildly related change, I'm also adding code to catch exceptions in the
code generator since Janino was breaking with the test data I tried this
patch on.

Tested with unit tests and by doing a count a very wide table (20k columns)
with many partitions.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #15112 from vanzin/SPARK-17549.
2016-09-16 14:02:56 -07:00
Sean Zhong a425a37a5d [SPARK-17426][SQL] Refactor TreeNode.toJSON to avoid OOM when converting unknown fields to JSON
## What changes were proposed in this pull request?

This PR is a follow up of SPARK-17356. Current implementation of `TreeNode.toJSON` recursively converts all fields of TreeNode to JSON, even if the field is of type `Seq` or type Map. This may trigger out of memory exception in cases like:

1. the Seq or Map can be very big. Converting them to JSON may take huge memory, which may trigger out of memory error.
2. Some user space input may also be propagated to the Plan. The user space input can be of arbitrary type, and may also be self-referencing. Trying to print user space input to JSON may trigger out of memory error or stack overflow error.

For a code example, please check the Jira description of SPARK-17426.

In this PR, we refactor the `TreeNode.toJSON` so that we only convert a field to JSON string if the field is a safe type.

## How was this patch tested?

Unit test.

Author: Sean Zhong <seanzhong@databricks.com>

Closes #14990 from clockfly/json_oom2.
2016-09-16 19:37:30 +08:00
Andrew Ray b72486f82d [SPARK-17458][SQL] Alias specified for aggregates in a pivot are not honored
## What changes were proposed in this pull request?

This change preserves aliases that are given for pivot aggregations

## How was this patch tested?

New unit test

Author: Andrew Ray <ray.andrew@gmail.com>

Closes #15111 from aray/SPARK-17458.
2016-09-15 21:45:29 +02:00
Sean Zhong a6b8182006 [SPARK-17364][SQL] Antlr lexer wrongly treats full qualified identifier as a decimal number token when parsing SQL string
## What changes were proposed in this pull request?

The Antlr lexer we use to tokenize a SQL string may wrongly tokenize a fully qualified identifier as a decimal number token. For example, table identifier `default.123_table` is wrongly tokenized as
```
default // Matches lexer rule IDENTIFIER
.123 // Matches lexer rule DECIMAL_VALUE
_TABLE // Matches lexer rule IDENTIFIER
```

The correct tokenization for `default.123_table` should be:
```
default // Matches lexer rule IDENTIFIER,
. // Matches a single dot
123_TABLE // Matches lexer rule IDENTIFIER
```

This PR fix the Antlr grammar so that it can tokenize fully qualified identifier correctly:
1. Fully qualified table name can be parsed correctly. For example, `select * from database.123_suffix`.
2. Fully qualified column name can be parsed correctly, for example `select a.123_suffix from a`.

### Before change

#### Case 1: Failed to parse fully qualified column name

```
scala> spark.sql("select a.123_column from a").show
org.apache.spark.sql.catalyst.parser.ParseException:
extraneous input '.123' expecting {<EOF>,
...
, IDENTIFIER, BACKQUOTED_IDENTIFIER}(line 1, pos 8)
== SQL ==
select a.123_column from a
--------^^^
```

#### Case 2: Failed to parse fully qualified table name
```
scala> spark.sql("select * from default.123_table")
org.apache.spark.sql.catalyst.parser.ParseException:
extraneous input '.123' expecting {<EOF>,
...
IDENTIFIER, BACKQUOTED_IDENTIFIER}(line 1, pos 21)

== SQL ==
select * from default.123_table
---------------------^^^
```

### After Change

#### Case 1: fully qualified column name, no ParseException thrown
```
scala> spark.sql("select a.123_column from a").show
```

#### Case 2: fully qualified table name, no ParseException thrown
```
scala> spark.sql("select * from default.123_table")
```

## How was this patch tested?

Unit test.

Author: Sean Zhong <seanzhong@databricks.com>

Closes #15006 from clockfly/SPARK-17364.
2016-09-15 20:53:48 +02:00
岑玉海 fe767395ff [SPARK-17429][SQL] use ImplicitCastInputTypes with function Length
## What changes were proposed in this pull request?
select length(11);
select length(2.0);
these sql will return errors, but hive is ok.
this PR will support casting input types implicitly for function length
the correct result is:
select length(11) return 2
select length(2.0) return 3

Author: 岑玉海 <261810726@qq.com>
Author: cenyuhai <cenyuhai@didichuxing.com>

Closes #15014 from cenyuhai/SPARK-17429.
2016-09-15 20:45:00 +02:00
Herman van Hovell d403562eb4 [SPARK-17114][SQL] Fix aggregates grouped by literals with empty input
## What changes were proposed in this pull request?
This PR fixes an issue with aggregates that have an empty input, and use a literals as their grouping keys. These aggregates are currently interpreted as aggregates **without** grouping keys, this triggers the ungrouped code path (which aways returns a single row).

This PR fixes the `RemoveLiteralFromGroupExpressions` optimizer rule, which changes the semantics of the Aggregate by eliminating all literal grouping keys.

## How was this patch tested?
Added tests to `SQLQueryTestSuite`.

Author: Herman van Hovell <hvanhovell@databricks.com>

Closes #15101 from hvanhovell/SPARK-17114-3.
2016-09-15 20:24:15 +02:00
Adam Roberts f893e26250 [SPARK-17524][TESTS] Use specified spark.buffer.pageSize
## What changes were proposed in this pull request?

This PR has the appendRowUntilExceedingPageSize test in RowBasedKeyValueBatchSuite use whatever spark.buffer.pageSize value a user has specified to prevent a test failure for anyone testing Apache Spark on a box with a reduced page size. The test is currently hardcoded to use the default page size which is 64 MB so this minor PR is a test improvement

## How was this patch tested?
Existing unit tests with 1 MB page size and with 64 MB (the default) page size

Author: Adam Roberts <aroberts@uk.ibm.com>

Closes #15079 from a-roberts/patch-5.
2016-09-15 09:37:12 +01:00
Xin Wu 040e46979d [SPARK-10747][SQL] Support NULLS FIRST|LAST clause in ORDER BY
## What changes were proposed in this pull request?
Currently, ORDER BY clause returns nulls value according to sorting order (ASC|DESC), considering null value is always smaller than non-null values.
However, SQL2003 standard support NULLS FIRST or NULLS LAST to allow users to specify whether null values should be returned first or last, regardless of sorting order (ASC|DESC).

This PR is to support this new feature.

## How was this patch tested?
New test cases are added to test NULLS FIRST|LAST for regular select queries and windowing queries.

(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)

Author: Xin Wu <xinwu@us.ibm.com>

Closes #14842 from xwu0226/SPARK-10747.
2016-09-14 21:14:29 +02:00
gatorsmile 52738d4e09 [SPARK-17409][SQL] Do Not Optimize Query in CTAS More Than Once
### What changes were proposed in this pull request?
As explained in https://github.com/apache/spark/pull/14797:
>Some analyzer rules have assumptions on logical plans, optimizer may break these assumption, we should not pass an optimized query plan into QueryExecution (will be analyzed again), otherwise we may some weird bugs.
For example, we have a rule for decimal calculation to promote the precision before binary operations, use PromotePrecision as placeholder to indicate that this rule should not apply twice. But a Optimizer rule will remove this placeholder, that break the assumption, then the rule applied twice, cause wrong result.

We should not optimize the query in CTAS more than once. For example,
```Scala
spark.range(99, 101).createOrReplaceTempView("tab1")
val sqlStmt = "SELECT id, cast(id as long) * cast('1.0' as decimal(38, 18)) as num FROM tab1"
sql(s"CREATE TABLE tab2 USING PARQUET AS $sqlStmt")
checkAnswer(spark.table("tab2"), sql(sqlStmt))
```
Before this PR, the results do not match
```
== Results ==
!== Correct Answer - 2 ==       == Spark Answer - 2 ==
![100,100.000000000000000000]   [100,null]
 [99,99.000000000000000000]     [99,99.000000000000000000]
```
After this PR, the results match.
```
+---+----------------------+
|id |num                   |
+---+----------------------+
|99 |99.000000000000000000 |
|100|100.000000000000000000|
+---+----------------------+
```

In this PR, we do not treat the `query` in CTAS as a child. Thus, the `query` will not be optimized when optimizing CTAS statement. However, we still need to analyze it for normalizing and verifying the CTAS in the Analyzer. Thus, we do it in the analyzer rule `PreprocessDDL`, because so far only this rule needs the analyzed plan of the `query`.

### How was this patch tested?
Added a test

Author: gatorsmile <gatorsmile@gmail.com>

Closes #15048 from gatorsmile/ctasOptimized.
2016-09-14 23:10:20 +08:00
gatorsmile 37b93f54e8 [SPARK-17530][SQL] Add Statistics into DESCRIBE FORMATTED
### What changes were proposed in this pull request?
Statistics is missing in the output of `DESCRIBE FORMATTED`. This PR is to add it. After the PR, the output will be like:
```
+----------------------------+----------------------------------------------------------------------------------------------------------------------+-------+
|col_name                    |data_type                                                                                                             |comment|
+----------------------------+----------------------------------------------------------------------------------------------------------------------+-------+
|key                         |string                                                                                                                |null   |
|value                       |string                                                                                                                |null   |
|                            |                                                                                                                      |       |
|# Detailed Table Information|                                                                                                                      |       |
|Database:                   |default                                                                                                               |       |
|Owner:                      |xiaoli                                                                                                                |       |
|Create Time:                |Tue Sep 13 14:36:57 PDT 2016                                                                                          |       |
|Last Access Time:           |Wed Dec 31 16:00:00 PST 1969                                                                                          |       |
|Location:                   |file:/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/warehouse-9982e1db-df17-4376-a140-dbbee0203d83/texttable|       |
|Table Type:                 |MANAGED                                                                                                               |       |
|Statistics:                 |sizeInBytes=5812, rowCount=500, isBroadcastable=false                                                                 |       |
|Table Parameters:           |                                                                                                                      |       |
|  rawDataSize               |-1                                                                                                                    |       |
|  numFiles                  |1                                                                                                                     |       |
|  transient_lastDdlTime     |1473802620                                                                                                            |       |
|  totalSize                 |5812                                                                                                                  |       |
|  COLUMN_STATS_ACCURATE     |false                                                                                                                 |       |
|  numRows                   |-1                                                                                                                    |       |
|                            |                                                                                                                      |       |
|# Storage Information       |                                                                                                                      |       |
|SerDe Library:              |org.apache.hadoop.hive.serde2.lazy.LazySimpleSerDe                                                                    |       |
|InputFormat:                |org.apache.hadoop.mapred.TextInputFormat                                                                              |       |
|OutputFormat:               |org.apache.hadoop.hive.ql.io.HiveIgnoreKeyTextOutputFormat                                                            |       |
|Compressed:                 |No                                                                                                                    |       |
|Storage Desc Parameters:    |                                                                                                                      |       |
|  serialization.format      |1                                                                                                                     |       |
+----------------------------+----------------------------------------------------------------------------------------------------------------------+-------+
```

Also improve the output of statistics in `DESCRIBE EXTENDED` by removing duplicate `Statistics`. Below is the example after the PR:

```
+----------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------+
|col_name                    |data_type                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        |comment|
+----------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------+
|key                         |string                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           |null   |
|value                       |string                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           |null   |
|                            |                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 |       |
|# Detailed Table Information|CatalogTable(
	Table: `default`.`texttable`
	Owner: xiaoli
	Created: Tue Sep 13 14:38:43 PDT 2016
	Last Access: Wed Dec 31 16:00:00 PST 1969
	Type: MANAGED
	Schema: [StructField(key,StringType,true), StructField(value,StringType,true)]
	Provider: hive
	Properties: [rawDataSize=-1, numFiles=1, transient_lastDdlTime=1473802726, totalSize=5812, COLUMN_STATS_ACCURATE=false, numRows=-1]
	Statistics: sizeInBytes=5812, rowCount=500, isBroadcastable=false
	Storage(Location: file:/private/var/folders/4b/sgmfldk15js406vk7lw5llzw0000gn/T/warehouse-8ea5c5a0-5680-4778-91cb-c6334cf8a708/texttable, InputFormat: org.apache.hadoop.mapred.TextInputFormat, OutputFormat: org.apache.hadoop.hive.ql.io.HiveIgnoreKeyTextOutputFormat, Serde: org.apache.hadoop.hive.serde2.lazy.LazySimpleSerDe, Properties: [serialization.format=1]))|       |
+----------------------------+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+-------+
```

### How was this patch tested?
Manually tested.

Author: gatorsmile <gatorsmile@gmail.com>

Closes #15083 from gatorsmile/descFormattedStats.
2016-09-14 00:37:42 +02:00
jiangxingbo 4ba63b193c [SPARK-17142][SQL] Complex query triggers binding error in HashAggregateExec
## What changes were proposed in this pull request?

In `ReorderAssociativeOperator` rule, we extract foldable expressions with Add/Multiply arithmetics, and replace with eval literal. For example, `(a + 1) + (b + 2)` is optimized to `(a + b + 3)` by this rule.
For aggregate operator, output expressions should be derived from groupingExpressions, current implemenation of `ReorderAssociativeOperator` rule may break this promise. A instance could be:
```
SELECT
  ((t1.a + 1) + (t2.a + 2)) AS out_col
FROM
  testdata2 AS t1
INNER JOIN
  testdata2 AS t2
ON
  (t1.a = t2.a)
GROUP BY (t1.a + 1), (t2.a + 2)
```
`((t1.a + 1) + (t2.a + 2))` is optimized to `(t1.a + t2.a + 3)`, which could not be derived from `ExpressionSet((t1.a +1), (t2.a + 2))`.
Maybe we should improve the rule of `ReorderAssociativeOperator` by adding a GroupingExpressionSet to keep Aggregate.groupingExpressions, and respect these expressions during the optimize stage.

## How was this patch tested?

Add new test case in `ReorderAssociativeOperatorSuite`.

Author: jiangxingbo <jiangxb1987@gmail.com>

Closes #14917 from jiangxb1987/rao.
2016-09-13 17:04:51 +02:00
Timothy Hunter 180796ecb3 [SPARK-17439][SQL] Fixing compression issues with approximate quantiles and adding more tests
## What changes were proposed in this pull request?

This PR build on #14976 and fixes a correctness bug that would cause the wrong quantile to be returned for small target errors.

## How was this patch tested?

This PR adds 8 unit tests that were failing without the fix.

Author: Timothy Hunter <timhunter@databricks.com>
Author: Sean Owen <sowen@cloudera.com>

Closes #15002 from thunterdb/ml-1783.
2016-09-11 08:03:45 +01:00
Eric Liang 722afbb2b3 [SPARK-17405] RowBasedKeyValueBatch should use default page size to prevent OOMs
## What changes were proposed in this pull request?

Before this change, we would always allocate 64MB per aggregation task for the first-level hash map storage, even when running in low-memory situations such as local mode. This changes it to use the memory manager default page size, which is automatically reduced from 64MB in these situations.

cc ooq JoshRosen

## How was this patch tested?

Tested manually with `bin/spark-shell --master=local[32]` and verifying that `(1 to math.pow(10, 3).toInt).toDF("n").withColumn("m", 'n % 2).groupBy('m).agg(sum('n)).show` does not crash.

Author: Eric Liang <ekl@databricks.com>

Closes #15016 from ericl/sc-4483.
2016-09-08 16:47:18 -07:00
Srinivasa Reddy Vundela 76ad89e924 [MINOR][SQL] Fixing the typo in unit test
## What changes were proposed in this pull request?

Fixing the typo in the unit test of CodeGenerationSuite.scala

## How was this patch tested?
Ran the unit test after fixing the typo and it passes

Author: Srinivasa Reddy Vundela <vsr@cloudera.com>

Closes #14989 from vundela/typo_fix.
2016-09-07 12:41:03 +01:00
Daoyuan Wang 6f4aeccf8c [SPARK-17427][SQL] function SIZE should return -1 when parameter is null
## What changes were proposed in this pull request?

`select size(null)` returns -1 in Hive. In order to be compatible, we should return `-1`.

## How was this patch tested?

unit test in `CollectionFunctionsSuite` and `DataFrameFunctionsSuite`.

Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #14991 from adrian-wang/size.
2016-09-07 13:01:27 +02:00
Liwei Lin 3ce3a282c8 [SPARK-17359][SQL][MLLIB] Use ArrayBuffer.+=(A) instead of ArrayBuffer.append(A) in performance critical paths
## What changes were proposed in this pull request?

We should generally use `ArrayBuffer.+=(A)` rather than `ArrayBuffer.append(A)`, because `append(A)` would involve extra boxing / unboxing.

## How was this patch tested?

N/A

Author: Liwei Lin <lwlin7@gmail.com>

Closes #14914 from lw-lin/append_to_plus_eq_v2.
2016-09-07 10:04:00 +01:00
Herman van Hovell 4f769b903b [SPARK-17296][SQL] Simplify parser join processing.
## What changes were proposed in this pull request?
Join processing in the parser relies on the fact that the grammar produces a right nested trees, for instance the parse tree for `select * from a join b join c` is expected to produce a tree similar to `JOIN(a, JOIN(b, c))`. However there are cases in which this (invariant) is violated, like:
```sql
SELECT COUNT(1)
FROM test T1
     CROSS JOIN test T2
     JOIN test T3
      ON T3.col = T1.col
     JOIN test T4
      ON T4.col = T1.col
```
In this case the parser returns a tree in which Joins are located on both the left and the right sides of the parent join node.

This PR introduces a different grammar rule which does not make this assumption. The new rule takes a relation and searches for zero or more joined relations. As a bonus processing is much easier.

## How was this patch tested?
Existing tests and I have added a regression test to the plan parser suite.

Author: Herman van Hovell <hvanhovell@databricks.com>

Closes #14867 from hvanhovell/SPARK-17296.
2016-09-07 00:44:07 +02:00
Sean Zhong 6f13aa7dfe [SPARK-17356][SQL] Fix out of memory issue when generating JSON for TreeNode
## What changes were proposed in this pull request?

class `org.apache.spark.sql.types.Metadata` is widely used in mllib to store some ml attributes. `Metadata` is commonly stored in `Alias` expression.

```
case class Alias(child: Expression, name: String)(
    val exprId: ExprId = NamedExpression.newExprId,
    val qualifier: Option[String] = None,
    val explicitMetadata: Option[Metadata] = None,
    override val isGenerated: java.lang.Boolean = false)
```

The `Metadata` can take a big memory footprint since the number of attributes is big ( in scale of million). When `toJSON` is called on `Alias` expression, the `Metadata` will also be converted to a big JSON string.
If a plan contains many such kind of `Alias` expressions, it may trigger out of memory error when `toJSON` is called, since converting all `Metadata` references to JSON will take huge memory.

With this PR, we will skip scanning Metadata when doing JSON conversion. For a reproducer of the OOM, and analysis, please look at jira https://issues.apache.org/jira/browse/SPARK-17356.

## How was this patch tested?

Existing tests.

Author: Sean Zhong <seanzhong@databricks.com>

Closes #14915 from clockfly/json_oom.
2016-09-06 16:05:50 +08:00
Wenchen Fan c0ae6bc6ea [SPARK-17361][SQL] file-based external table without path should not be created
## What changes were proposed in this pull request?

Using the public `Catalog` API, users can create a file-based data source table, without giving the path options. For this case, currently we can create the table successfully, but fail when we read it. Ideally we should fail during creation.

This is because when we create data source table, we resolve the data source relation without validating path: `resolveRelation(checkPathExist = false)`.

Looking back to why we add this trick(`checkPathExist`), it's because when we call `resolveRelation` for managed table, we add the path to data source options but the path is not created yet. So why we add this not-yet-created path to data source options? This PR fix the problem by adding path to options after we call `resolveRelation`. Then we can remove the `checkPathExist` parameter in `DataSource.resolveRelation` and do some related cleanups.

## How was this patch tested?

existing tests and new test in `CatalogSuite`

Author: Wenchen Fan <wenchen@databricks.com>

Closes #14921 from cloud-fan/check-path.
2016-09-06 14:17:47 +08:00
Wenchen Fan 8d08f43d09 [SPARK-17279][SQL] better error message for exceptions during ScalaUDF execution
## What changes were proposed in this pull request?

If `ScalaUDF` throws exceptions during executing user code, sometimes it's hard for users to figure out what's wrong, especially when they use Spark shell. An example
```
org.apache.spark.SparkException: Job aborted due to stage failure: Task 12 in stage 325.0 failed 4 times, most recent failure: Lost task 12.3 in stage 325.0 (TID 35622, 10.0.207.202): java.lang.NullPointerException
	at line8414e872fb8b42aba390efc153d1611a12.$read$$iwC$$iwC$$iwC$$iwC$$anonfun$2.apply(<console>:40)
	at line8414e872fb8b42aba390efc153d1611a12.$read$$iwC$$iwC$$iwC$$iwC$$anonfun$2.apply(<console>:40)
	at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown Source)
...
```
We should catch these exceptions and rethrow them with better error message, to say that the exception is happened in scala udf.

This PR also does some clean up for `ScalaUDF` and add a unit test suite for it.

## How was this patch tested?

the new test suite

Author: Wenchen Fan <wenchen@databricks.com>

Closes #14850 from cloud-fan/npe.
2016-09-06 10:36:00 +08:00
wangzhenhua 6d86403d8b [SPARK-17072][SQL] support table-level statistics generation and storing into/loading from metastore
## What changes were proposed in this pull request?

1. Support generation table-level statistics for
    - hive tables in HiveExternalCatalog
    - data source tables in HiveExternalCatalog
    - data source tables in InMemoryCatalog.
2. Add a property "catalogStats" in CatalogTable to hold statistics in Spark side.
3. Put logics of statistics transformation between Spark and Hive in HiveClientImpl.
4. Extend Statistics class by adding rowCount (will add estimatedSize when we have column stats).

## How was this patch tested?

add unit tests

Author: wangzhenhua <wangzhenhua@huawei.com>
Author: Zhenhua Wang <wangzhenhua@huawei.com>

Closes #14712 from wzhfy/tableStats.
2016-09-05 17:32:31 +02:00
Wenchen Fan 3ccb23e445 [SPARK-17394][SQL] should not allow specify database in table/view name after RENAME TO
## What changes were proposed in this pull request?

It's really weird that we allow users to specify database in both from table name and to table name
 in `ALTER TABLE RENAME TO`, while logically we can't support rename a table to a different database.

Both postgres and MySQL disallow this syntax, it's reasonable to follow them and simply our code.

## How was this patch tested?

new test in `DDLCommandSuite`

Author: Wenchen Fan <wenchen@databricks.com>

Closes #14955 from cloud-fan/rename.
2016-09-05 13:09:20 +08:00
Shivansh e75c162e9e [SPARK-17308] Improved the spark core code by replacing all pattern match on boolean value by if/else block.
## What changes were proposed in this pull request?
Improved the code quality of spark by replacing all pattern match on boolean value by if/else block.

## How was this patch tested?

By running the tests

Author: Shivansh <shiv4nsh@gmail.com>

Closes #14873 from shiv4nsh/SPARK-17308.
2016-09-04 12:39:26 +01:00
gatorsmile 6b156e2fcf [SPARK-17324][SQL] Remove Direct Usage of HiveClient in InsertIntoHiveTable
### What changes were proposed in this pull request?
This is another step to get rid of HiveClient from `HiveSessionState`. All the metastore interactions should be through `ExternalCatalog` interface. However, the existing implementation of `InsertIntoHiveTable ` still requires Hive clients. This PR is to remove HiveClient by moving the metastore interactions into `ExternalCatalog`.

### How was this patch tested?
Existing test cases

Author: gatorsmile <gatorsmile@gmail.com>

Closes #14888 from gatorsmile/removeClientFromInsertIntoHiveTable.
2016-09-04 15:04:33 +08:00
Herman van Hovell c2a1576c23 [SPARK-17335][SQL] Fix ArrayType and MapType CatalogString.
## What changes were proposed in this pull request?
the `catalogString` for `ArrayType` and `MapType` currently calls the `simpleString` method on its children. This is a problem when the child is a struct, the `struct.simpleString` implementation truncates the number of fields it shows (25 at max). This breaks the generation of a proper `catalogString`, and has shown to cause errors while writing to Hive.

This PR fixes this by providing proper `catalogString` implementations for `ArrayData` or `MapData`.

## How was this patch tested?
Added testing for `catalogString` to `DataTypeSuite`.

Author: Herman van Hovell <hvanhovell@databricks.com>

Closes #14938 from hvanhovell/SPARK-17335.
2016-09-03 19:02:20 +02:00