Commit graph

926 commits

Author SHA1 Message Date
Shixiong Zhu b7d74a602f [SPARK-7799][SPARK-12786][STREAMING] Add "streaming-akka" project
Include the following changes:

1. Add "streaming-akka" project and org.apache.spark.streaming.akka.AkkaUtils for creating an actorStream
2. Remove "StreamingContext.actorStream" and "JavaStreamingContext.actorStream"
3. Update the ActorWordCount example and add the JavaActorWordCount example
4. Make "streaming-zeromq" depend on "streaming-akka" and update the codes accordingly

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10744 from zsxwing/streaming-akka-2.
2016-01-20 13:55:41 -08:00
Shixiong Zhu 944fdadf77 [SPARK-12847][CORE][STREAMING] Remove StreamingListenerBus and post all Streaming events to the same thread as Spark events
Including the following changes:

1. Add StreamingListenerForwardingBus to WrappedStreamingListenerEvent process events in `onOtherEvent` to StreamingListener
2. Remove StreamingListenerBus
3. Merge AsynchronousListenerBus and LiveListenerBus to the same class LiveListenerBus
4. Add `logEvent` method to SparkListenerEvent so that EventLoggingListener can use it to ignore WrappedStreamingListenerEvents

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10779 from zsxwing/streaming-listener.
2016-01-20 11:57:53 -08:00
Josh Rosen b8cb548a43 [SPARK-10985][CORE] Avoid passing evicted blocks throughout BlockManager
This patch refactors portions of the BlockManager and CacheManager in order to avoid having to pass `evictedBlocks` lists throughout the code. It appears that these lists were only consumed by `TaskContext.taskMetrics`, so the new code now directly updates the metrics from the lower-level BlockManager methods.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #10776 from JoshRosen/SPARK-10985.
2016-01-18 13:34:12 -08:00
Shixiong Zhu 4f60651cbe [SPARK-12652][PYSPARK] Upgrade Py4J to 0.9.1
- [x] Upgrade Py4J to 0.9.1
- [x] SPARK-12657: Revert SPARK-12617
- [x] SPARK-12658: Revert SPARK-12511
  - Still keep the change that only reading checkpoint once. This is a manual change and worth to take a look carefully. bfd4b5c040
- [x] Verify no leak any more after reverting our workarounds

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10692 from zsxwing/py4j-0.9.1.
2016-01-12 14:27:05 -08:00
Kousuke Saruta 39ae04e6b7 [SPARK-12692][BUILD][STREAMING] Scala style: Fix the style violation (Space before "," or ":")
Fix the style violation (space before , and :).
This PR is a followup for #10643.

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #10685 from sarutak/SPARK-12692-followup-streaming.
2016-01-11 21:06:22 -08:00
Marcelo Vanzin 6439a82503 [SPARK-3873][BUILD] Enable import ordering error checking.
Turn import ordering violations into build errors, plus a few adjustments
to account for how the checker behaves. I'm a little on the fence about
whether the existing code is right, but it's easier to appease the checker
than to discuss what's the more correct order here.

Plus a few fixes to imports that cropped in since my recent cleanups.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #10612 from vanzin/SPARK-3873-enable.
2016-01-10 20:04:50 -08:00
Sean Owen 659fd9d04b [SPARK-4819] Remove Guava's "Optional" from public API
Replace Guava `Optional` with (an API clone of) Java 8 `java.util.Optional` (edit: and a clone of Guava `Optional`)

See also https://github.com/apache/spark/pull/10512

Author: Sean Owen <sowen@cloudera.com>

Closes #10513 from srowen/SPARK-4819.
2016-01-08 13:02:30 -08:00
Sean Owen b9c8353378 [SPARK-12618][CORE][STREAMING][SQL] Clean up build warnings: 2.0.0 edition
Fix most build warnings: mostly deprecated API usages. I'll annotate some of the changes below. CC rxin who is leading the charge to remove the deprecated APIs.

Author: Sean Owen <sowen@cloudera.com>

Closes #10570 from srowen/SPARK-12618.
2016-01-08 17:47:44 +00:00
Shixiong Zhu 28e0e500a2 [SPARK-12591][STREAMING] Register OpenHashMapBasedStateMap for Kryo
The default serializer in Kryo is FieldSerializer and it ignores transient fields and never calls `writeObject` or `readObject`. So we should register OpenHashMapBasedStateMap using `DefaultSerializer` to make it work with Kryo.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10609 from zsxwing/SPARK-12591.
2016-01-07 17:46:24 -08:00
Shixiong Zhu c0c397509b [SPARK-12510][STREAMING] Refactor ActorReceiver to support Java
This PR includes the following changes:

1. Rename `ActorReceiver` to `ActorReceiverSupervisor`
2. Remove `ActorHelper`
3. Add a new `ActorReceiver` for Scala and `JavaActorReceiver` for Java
4. Add `JavaActorWordCount` example

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10457 from zsxwing/java-actor-stream.
2016-01-07 15:26:55 -08:00
Jacek Laskowski 1b2c2162af [STREAMING][MINOR] More contextual information in logs + minor code i…
…mprovements

Please review and merge at your convenience. Thanks!

Author: Jacek Laskowski <jacek@japila.pl>

Closes #10595 from jaceklaskowski/streaming-minor-fixes.
2016-01-07 21:12:57 +00:00
Josh Rosen 8e19c7663a [SPARK-7689] Remove TTL-based metadata cleaning in Spark 2.0
This PR removes `spark.cleaner.ttl` and the associated TTL-based metadata cleaning code.

Now that we have the `ContextCleaner` and a timer to trigger periodic GCs, I don't think that `spark.cleaner.ttl` is necessary anymore. The TTL-based cleaning isn't enabled by default, isn't included in our end-to-end tests, and has been a source of user confusion when it is misconfigured. If the TTL is set too low, data which is still being used may be evicted / deleted, leading to hard to diagnose bugs.

For all of these reasons, I think that we should remove this functionality in Spark 2.0. Additional benefits of doing this include marginally reduced memory usage, since we no longer need to store timetsamps in hashmaps, and a handful fewer threads.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #10534 from JoshRosen/remove-ttl-based-cleaning.
2016-01-06 20:50:31 -08:00
Sean Owen ac56cf605b [SPARK-12604][CORE] Java count(AprroxDistinct)ByKey methods return Scala Long not Java
Change Java countByKey, countApproxDistinctByKey return types to use Java Long, not Scala; update similar methods for consistency on java.long.Long.valueOf with no API change

Author: Sean Owen <sowen@cloudera.com>

Closes #10554 from srowen/SPARK-12604.
2016-01-06 17:17:32 -08:00
Shixiong Zhu cbaea9591f Revert "[SPARK-12672][STREAMING][UI] Use the uiRoot function instead of default root path to gain the streaming batch url."
This reverts commit 19e4e9febf. Will merge #10618 instead.
2016-01-06 13:51:50 -08:00
huangzhaowei 19e4e9febf [SPARK-12672][STREAMING][UI] Use the uiRoot function instead of default root path to gain the streaming batch url.
Author: huangzhaowei <carlmartinmax@gmail.com>

Closes #10617 from SaintBacchus/SPARK-12672.
2016-01-06 12:48:57 -08:00
Marcelo Vanzin b3ba1be3b7 [SPARK-3873][TESTS] Import ordering fixes.
Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #10582 from vanzin/SPARK-3873-tests.
2016-01-05 19:07:39 -08:00
Shixiong Zhu 6cfe341ee8 [SPARK-12511] [PYSPARK] [STREAMING] Make sure PythonDStream.registerSerializer is called only once
There is an issue that Py4J's PythonProxyHandler.finalize blocks forever. (https://github.com/bartdag/py4j/pull/184)

Py4j will create a PythonProxyHandler in Java for "transformer_serializer" when calling "registerSerializer". If we call "registerSerializer" twice, the second PythonProxyHandler will override the first one, then the first one will be GCed and trigger "PythonProxyHandler.finalize". To avoid that, we should not call"registerSerializer" more than once, so that "PythonProxyHandler" in Java side won't be GCed.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10514 from zsxwing/SPARK-12511.
2016-01-05 13:48:47 -08:00
Shixiong Zhu 43706bf8bd [SPARK-12608][STREAMING] Remove submitJobThreadPool since submitJob doesn't create a separate thread to wait for the job result
Before #9264, submitJob would create a separate thread to wait for the job result. `submitJobThreadPool` was a workaround in `ReceiverTracker` to run these waiting-job-result threads. Now #9264 has been merged to master and resolved this blocking issue, `submitJobThreadPool` can be removed now.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10560 from zsxwing/remove-submitJobThreadPool.
2016-01-04 11:00:15 -08:00
guoxu1231 962aac4db9 [SPARK-12513][STREAMING] SocketReceiver hang in Netcat example
Explicitly close client side socket connection before restart socket receiver.

Author: guoxu1231 <guoxu1231@gmail.com>
Author: Shawn Guo <guoxu1231@gmail.com>

Closes #10464 from guoxu1231/SPARK-12513.
2016-01-04 14:23:07 +00:00
Sean Owen 15bd73627e [SPARK-12481][CORE][STREAMING][SQL] Remove usage of Hadoop deprecated APIs and reflection that supported 1.x
Remove use of deprecated Hadoop APIs now that 2.2+ is required

Author: Sean Owen <sowen@cloudera.com>

Closes #10446 from srowen/SPARK-12481.
2016-01-02 13:15:53 +00:00
Marcelo Vanzin efb10cc9ad [SPARK-3873][STREAMING] Import order fixes for streaming.
Also included a few miscelaneous other modules that had very few violations.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #10532 from vanzin/SPARK-3873-streaming.
2015-12-31 01:34:13 -08:00
Kazuaki Ishizaki 3920466118 [SPARK-12311][CORE] Restore previous value of "os.arch" property in test suites after forcing to set specific value to "os.arch" property
Restore the original value of os.arch property after each test

Since some of tests forced to set the specific value to os.arch property, we need to set the original value.

Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>

Closes #10289 from kiszk/SPARK-12311.
2015-12-24 13:37:28 +00:00
Shixiong Zhu 93da8565fe [MINOR] Fix typos in JavaStreamingContext
Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10424 from zsxwing/typo.
2015-12-21 22:28:18 -08:00
Reynold Xin f496031bd2 Bump master version to 2.0.0-SNAPSHOT.
Author: Reynold Xin <rxin@databricks.com>

Closes #10387 from rxin/version-bump.
2015-12-19 15:13:05 -08:00
jhu-chang f4346f612b [SPARK-11749][STREAMING] Duplicate creating the RDD in file stream when recovering from checkpoint data
Add a transient flag `DStream.restoredFromCheckpointData` to control the restore processing in DStream to avoid duplicate works:  check this flag first in `DStream.restoreCheckpointData`, only when `false`, the restore process will be executed.

Author: jhu-chang <gt.hu.chang@gmail.com>

Closes #9765 from jhu-chang/SPARK-11749.
2015-12-17 17:53:15 -08:00
Shixiong Zhu 540b5aeadc [SPARK-12410][STREAMING] Fix places that use '.' and '|' directly in split
String.split accepts a regular expression, so we should escape "." and "|".

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10361 from zsxwing/reg-bug.
2015-12-17 13:23:48 -08:00
proflin d52bf47e13 [SPARK-12304][STREAMING] Make Spark Streaming web UI display more fri…
…endly Receiver graphs

Currently, the Spark Streaming web UI uses the same maxY when displays 'Input Rate Times& Histograms' and 'Per-Receiver Times& Histograms'.

This may lead to somewhat un-friendly graphs: once we have tens of Receivers or more, every 'Per-Receiver Times' line almost hits the ground.

This issue proposes to calculate a new maxY against the original one, which is shared among all the `Per-Receiver Times& Histograms' graphs.

Before:
![before-5](https://cloud.githubusercontent.com/assets/15843379/11761362/d790c356-a0fa-11e5-860e-4b834603de1d.png)

After:
![after-5](https://cloud.githubusercontent.com/assets/15843379/11761361/cfabf692-a0fa-11e5-97d0-4ad124aaca2a.png)

Author: proflin <proflin.me@gmail.com>

Closes #10318 from proflin/SPARK-12304.
2015-12-15 20:22:56 -08:00
jerryshao bc1ff9f4a4 [STREAMING][MINOR] Fix typo in function name of StateImpl
cc\ tdas zsxwing , please review. Thanks a lot.

Author: jerryshao <sshao@hortonworks.com>

Closes #10305 from jerryshao/fix-typo-state-impl.
2015-12-15 09:41:40 -08:00
proflin 713e6959d2 [SPARK-12273][STREAMING] Make Spark Streaming web UI list Receivers in order
Currently the Streaming web UI does NOT list Receivers in order; however, it seems more convenient for the users if Receivers are listed in order.

![spark-12273](https://cloud.githubusercontent.com/assets/15843379/11736602/0bb7f7a8-a00b-11e5-8e86-96ba9297fb12.png)

Author: proflin <proflin.me@gmail.com>

Closes #10264 from proflin/Spark-12273.
2015-12-11 13:50:36 -08:00
Bryan Cutler 6a6c1fc5c8 [SPARK-11713] [PYSPARK] [STREAMING] Initial RDD updateStateByKey for PySpark
Adding ability to define an initial state RDD for use with updateStateByKey PySpark.  Added unit test and changed stateful_network_wordcount example to use initial RDD.

Author: Bryan Cutler <bjcutler@us.ibm.com>

Closes #10082 from BryanCutler/initial-rdd-updateStateByKey-SPARK-11713.
2015-12-10 14:21:15 -08:00
bomeng e29704f90d [SPARK-12136][STREAMING] rddToFileName does not properly handle prefix and suffix parameters
The original code does not properly handle the cases where the prefix is null, but suffix is not null - the suffix should be used but is not.

The fix is using StringBuilder to construct the proper file name.

Author: bomeng <bmeng@us.ibm.com>
Author: Bo Meng <mengbo@bos-macbook-pro.usca.ibm.com>

Closes #10185 from bomeng/SPARK-12136.
2015-12-10 12:53:53 +00:00
Tathagata Das bd2cd4f53d [SPARK-12244][SPARK-12245][STREAMING] Rename trackStateByKey to mapWithState and change tracking function signature
SPARK-12244:

Based on feedback from early users and personal experience attempting to explain it, the name trackStateByKey had two problem.
"trackState" is a completely new term which really does not give any intuition on what the operation is
the resultant data stream of objects returned by the function is called in docs as the "emitted" data for the lack of a better.
"mapWithState" makes sense because the API is like a mapping function like (Key, Value) => T with State as an additional parameter. The resultant data stream is "mapped data". So both problems are solved.

SPARK-12245:

From initial experiences, not having the key in the function makes it hard to return mapped stuff, as the whole information of the records is not there. Basically the user is restricted to doing something like mapValue() instead of map(). So adding the key as a parameter.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #10224 from tdas/rename.
2015-12-09 20:47:15 -08:00
Tathagata Das 5d80d8c6a5 [SPARK-11932][STREAMING] Partition previous TrackStateRDD if partitioner not present
The reason is that TrackStateRDDs generated by trackStateByKey expect the previous batch's TrackStateRDDs to have a partitioner. However, when recovery from DStream checkpoints, the RDDs recovered from RDD checkpoints do not have a partitioner attached to it. This is because RDD checkpoints do not preserve the partitioner (SPARK-12004).

While #9983 solves SPARK-12004 by preserving the partitioner through RDD checkpoints, there may be a non-zero chance that the saving and recovery fails. To be resilient, this PR repartitions the previous state RDD if the partitioner is not detected.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9988 from tdas/SPARK-11932.
2015-12-07 11:03:59 -08:00
Burak Yavuz 6fd9e70e3e [SPARK-12106][STREAMING][FLAKY-TEST] BatchedWAL test transiently flaky when Jenkins load is high
We need to make sure that the last entry is indeed the last entry in the queue.

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #10110 from brkyvz/batch-wal-test-fix.
2015-12-07 00:21:55 -08:00
Shixiong Zhu 3af53e61fd [SPARK-12084][CORE] Fix codes that uses ByteBuffer.array incorrectly
`ByteBuffer` doesn't guarantee all contents in `ByteBuffer.array` are valid. E.g, a ByteBuffer returned by `ByteBuffer.slice`. We should not use the whole content of `ByteBuffer` unless we know that's correct.

This patch fixed all places that use `ByteBuffer.array` incorrectly.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10083 from zsxwing/bytebuffer-array.
2015-12-04 17:02:04 -08:00
Dmitry Erastov d0d8222778 [SPARK-6990][BUILD] Add Java linting script; fix minor warnings
This replaces https://github.com/apache/spark/pull/9696

Invoke Checkstyle and print any errors to the console, failing the step.
Use Google's style rules modified according to
https://cwiki.apache.org/confluence/display/SPARK/Spark+Code+Style+Guide
Some important checks are disabled (see TODOs in `checkstyle.xml`) due to
multiple violations being present in the codebase.

Suggest fixing those TODOs in a separate PR(s).

More on Checkstyle can be found on the [official website](http://checkstyle.sourceforge.net/).

Sample output (from [build 46345](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/46345/consoleFull)) (duplicated because I run the build twice with different profiles):

> Checkstyle checks failed at following occurrences:
[ERROR] src/main/java/org/apache/spark/sql/execution/datasources/parquet/UnsafeRowParquetRecordReader.java:[217,7] (coding) MissingSwitchDefault: switch without "default" clause.
> [ERROR] src/main/java/org/apache/spark/sql/execution/datasources/parquet/SpecificParquetRecordReaderBase.java:[198,10] (modifier) ModifierOrder: 'protected' modifier out of order with the JLS suggestions.
> [ERROR] src/main/java/org/apache/spark/sql/execution/datasources/parquet/UnsafeRowParquetRecordReader.java:[217,7] (coding) MissingSwitchDefault: switch without "default" clause.
> [ERROR] src/main/java/org/apache/spark/sql/execution/datasources/parquet/SpecificParquetRecordReaderBase.java:[198,10] (modifier) ModifierOrder: 'protected' modifier out of order with the JLS suggestions.
> [error] running /home/jenkins/workspace/SparkPullRequestBuilder2/dev/lint-java ; received return code 1

Also fix some of the minor violations that didn't require sweeping changes.

Apologies for the previous botched PRs - I finally figured out the issue.

cr: JoshRosen, pwendell

> I state that the contribution is my original work, and I license the work to the project under the project's open source license.

Author: Dmitry Erastov <derastov@gmail.com>

Closes #9867 from dskrvk/master.
2015-12-04 12:03:45 -08:00
Tathagata Das 4106d80fb6 [SPARK-12122][STREAMING] Prevent batches from being submitted twice after recovering StreamingContext from checkpoint
Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #10127 from tdas/SPARK-12122.
2015-12-04 01:42:29 -08:00
Tathagata Das a02d472773 [FLAKY-TEST-FIX][STREAMING][TEST] Make sure StreamingContexts are shutdown after test
Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #10124 from tdas/InputStreamSuite-flaky-test.
2015-12-03 12:00:09 -08:00
Josh Rosen 452690ba1c [SPARK-12001] Allow partially-stopped StreamingContext to be completely stopped
If `StreamingContext.stop()` is interrupted midway through the call, the context will be marked as stopped but certain state will have not been cleaned up. Because `state = STOPPED` will be set, subsequent `stop()` calls will be unable to finish stopping the context, preventing any new StreamingContexts from being created.

This patch addresses this issue by only marking the context as `STOPPED` once the `stop()` has successfully completed which allows `stop()` to be called a second time in order to finish stopping the context in case the original `stop()` call was interrupted.

I discovered this issue by examining logs from a failed Jenkins run in which this race condition occurred in `FailureSuite`, leaking an unstoppable context and causing all subsequent tests to fail.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #9982 from JoshRosen/SPARK-12001.
2015-12-02 13:44:01 -08:00
Tathagata Das 8a75a30495 [SPARK-12087][STREAMING] Create new JobConf for every batch in saveAsHadoopFiles
The JobConf object created in `DStream.saveAsHadoopFiles` is used concurrently in multiple places:
* The JobConf is updated by `RDD.saveAsHadoopFile()` before the job is launched
* The JobConf is serialized as part of the DStream checkpoints.
These concurrent accesses (updating in one thread, while the another thread is serializing it) can lead to concurrentModidicationException in the underlying Java hashmap using in the internal Hadoop Configuration object.

The solution is to create a new JobConf in every batch, that is updated by `RDD.saveAsHadoopFile()`, while the checkpointing serializes the original JobConf.

Tests to be added in #9988 will fail reliably without this patch. Keeping this patch really small to make sure that it can be added to previous branches.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #10088 from tdas/SPARK-12087.
2015-12-01 21:04:52 -08:00
Cheng Lian 69dbe6b40d [SPARK-12046][DOC] Fixes various ScalaDoc/JavaDoc issues
This PR backports PR #10039 to master

Author: Cheng Lian <lian@databricks.com>

Closes #10063 from liancheng/spark-12046.doc-fix.master.
2015-12-01 10:21:31 -08:00
Shixiong Zhu f57e6c9eff [SPARK-12021][STREAMING][TESTS] Fix the potential dead-lock in StreamingListenerSuite
In StreamingListenerSuite."don't call ssc.stop in listener", after the main thread calls `ssc.stop()`,  `StreamingContextStoppingCollector` may call  `ssc.stop()` in the listener bus thread, which is a dead-lock. This PR updated `StreamingContextStoppingCollector` to only call `ssc.stop()` in the first batch to avoid the dead-lock.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10011 from zsxwing/fix-test-deadlock.
2015-11-27 11:50:18 -08:00
Shixiong Zhu d29e2ef4cf [SPARK-11935][PYSPARK] Send the Python exceptions in TransformFunction and TransformFunctionSerializer to Java
The Python exception track in TransformFunction and TransformFunctionSerializer is not sent back to Java. Py4j just throws a very general exception, which is hard to debug.

This PRs adds `getFailure` method to get the failure message in Java side.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9922 from zsxwing/SPARK-11935.
2015-11-25 11:47:21 -08:00
Tathagata Das 2169886883 [SPARK-11979][STREAMING] Empty TrackStateRDD cannot be checkpointed and recovered from checkpoint file
This solves the following exception caused when empty state RDD is checkpointed and recovered. The root cause is that an empty OpenHashMapBasedStateMap cannot be deserialized as the initialCapacity is set to zero.
```
Job aborted due to stage failure: Task 0 in stage 6.0 failed 1 times, most recent failure: Lost task 0.0 in stage 6.0 (TID 20, localhost): java.lang.IllegalArgumentException: requirement failed: Invalid initial capacity
	at scala.Predef$.require(Predef.scala:233)
	at org.apache.spark.streaming.util.OpenHashMapBasedStateMap.<init>(StateMap.scala:96)
	at org.apache.spark.streaming.util.OpenHashMapBasedStateMap.<init>(StateMap.scala:86)
	at org.apache.spark.streaming.util.OpenHashMapBasedStateMap.readObject(StateMap.scala:291)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:606)
	at java.io.ObjectStreamClass.invokeReadObject(ObjectStreamClass.java:1017)
	at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1893)
	at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
	at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
	at java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:1990)
	at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1915)
	at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
	at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
	at java.io.ObjectInputStream.readObject(ObjectInputStream.java:370)
	at org.apache.spark.serializer.JavaDeserializationStream.readObject(JavaSerializer.scala:76)
	at org.apache.spark.serializer.DeserializationStream$$anon$1.getNext(Serializer.scala:181)
	at org.apache.spark.util.NextIterator.hasNext(NextIterator.scala:73)
	at scala.collection.Iterator$$anon$13.hasNext(Iterator.scala:371)
	at scala.collection.Iterator$class.foreach(Iterator.scala:727)
	at scala.collection.AbstractIterator.foreach(Iterator.scala:1157)
	at scala.collection.generic.Growable$class.$plus$plus$eq(Growable.scala:48)
	at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:103)
	at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:47)
	at scala.collection.TraversableOnce$class.to(TraversableOnce.scala:273)
	at scala.collection.AbstractIterator.to(Iterator.scala:1157)
	at scala.collection.TraversableOnce$class.toBuffer(TraversableOnce.scala:265)
	at scala.collection.AbstractIterator.toBuffer(Iterator.scala:1157)
	at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:252)
	at scala.collection.AbstractIterator.toArray(Iterator.scala:1157)
	at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$12.apply(RDD.scala:921)
	at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$12.apply(RDD.scala:921)
	at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
	at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
	at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
	at org.apache.spark.scheduler.Task.run(Task.scala:88)
	at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
	at java.lang.Thread.run(Thread.java:744)
```

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9958 from tdas/SPARK-11979.
2015-11-24 23:13:01 -08:00
Burak Yavuz a5d9887633 [STREAMING][FLAKY-TEST] Catch execution context race condition in FileBasedWriteAheadLog.close()
There is a race condition in `FileBasedWriteAheadLog.close()`, where if delete's of old log files are in progress, the write ahead log may close, and result in a `RejectedExecutionException`. This is okay, and should be handled gracefully.

Example test failures:
https://amplab.cs.berkeley.edu/jenkins/job/Spark-1.6-SBT/AMPLAB_JENKINS_BUILD_PROFILE=hadoop1.0,label=spark-test/95/testReport/junit/org.apache.spark.streaming.util/BatchedWriteAheadLogWithCloseFileAfterWriteSuite/BatchedWriteAheadLog___clean_old_logs/

The reason the test fails is in `afterEach`, `writeAheadLog.close` is called, and there may still be async deletes in flight.

tdas zsxwing

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9953 from brkyvz/flaky-ss.
2015-11-24 20:58:47 -08:00
Tathagata Das b2cecb80ec [SPARK-11845][STREAMING][TEST] Added unit test to verify TrackStateRDD is correctly checkpointed
To make sure that all lineage is correctly truncated for TrackStateRDD when checkpointed.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9831 from tdas/SPARK-11845.
2015-11-19 16:50:08 -08:00
Burak Yavuz 921900fd06 [SPARK-11791] Fix flaky test in BatchedWriteAheadLogSuite
stack trace of failure:
```
org.scalatest.exceptions.TestFailedDueToTimeoutException: The code passed to eventually never returned normally. Attempted 62 times over 1.006322071 seconds. Last failure message:
Argument(s) are different! Wanted:
writeAheadLog.write(
    java.nio.HeapByteBuffer[pos=0 lim=124 cap=124],
    10
);
-> at org.apache.spark.streaming.util.BatchedWriteAheadLogSuite$$anonfun$23$$anonfun$apply$mcV$sp$15.apply(WriteAheadLogSuite.scala:518)
Actual invocation has different arguments:
writeAheadLog.write(
    java.nio.HeapByteBuffer[pos=0 lim=124 cap=124],
    10
);
-> at org.apache.spark.streaming.util.WriteAheadLogSuite$BlockingWriteAheadLog.write(WriteAheadLogSuite.scala:756)
```

I believe the issue was that due to a race condition, the ordering of the events could be messed up in the final ByteBuffer, therefore the comparison fails.

By adding eventually between the requests, we make sure the ordering is preserved. Note that in real life situations, the ordering across threads will not matter.

Another solution would be to implement a custom mockito matcher that sorts and then compares the results, but that kind of sounds like overkill to me. Let me know what you think tdas zsxwing

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #9790 from brkyvz/fix-flaky-2.
2015-11-18 16:19:00 -08:00
Tathagata Das a402c92c92 [SPARK-11814][STREAMING] Add better default checkpoint duration
DStream checkpoint interval is by default set at max(10 second, batch interval). That's bad for large batch intervals where the checkpoint interval = batch interval, and RDDs get checkpointed every batch.
This PR is to set the checkpoint interval of trackStateByKey to 10 * batch duration.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9805 from tdas/SPARK-11814.
2015-11-18 16:08:06 -08:00
Josh Rosen 4b11712190 [SPARK-11495] Fix potential socket / file handle leaks that were found via static analysis
The HP Fortify Opens Source Review team (https://www.hpfod.com/open-source-review-project) reported a handful of potential resource leaks that were discovered using their static analysis tool. We should fix the issues identified by their scan.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #9455 from JoshRosen/fix-potential-resource-leaks.
2015-11-18 16:00:35 -08:00
Bryan Cutler 31921e0f0b [SPARK-4557][STREAMING] Spark Streaming foreachRDD Java API method should accept a VoidFunction<...>
Currently streaming foreachRDD Java API uses a function prototype requiring a return value of null.  This PR deprecates the old method and uses VoidFunction to allow for more concise declaration.  Also added VoidFunction2 to Java API in order to use in Streaming methods.  Unit test is added for using foreachRDD with VoidFunction, and changes have been tested with Java 7 and Java 8 using lambdas.

Author: Bryan Cutler <bjcutler@us.ibm.com>

Closes #9488 from BryanCutler/foreachRDD-VoidFunction-SPARK-4557.
2015-11-18 12:09:54 -08:00