Commit graph

243 commits

Author SHA1 Message Date
gatorsmile bb2f069cf2 [SPARK-25436] Bump master branch version to 2.5.0-SNAPSHOT
## What changes were proposed in this pull request?
In the dev list, we can still discuss whether the next version is 2.5.0 or 3.0.0. Let us first bump the master branch version to `2.5.0-SNAPSHOT`.

## How was this patch tested?
N/A

Closes #22426 from gatorsmile/bumpVersionMaster.

Authored-by: gatorsmile <gatorsmile@gmail.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2018-09-15 16:24:02 -07:00
Sean Owen b3e6fe7c46 [SPARK-23654][BUILD] remove jets3t as a dependency of spark
## What changes were proposed in this pull request?

Remove jets3t dependency, and bouncy castle which it brings in; update licenses and deps
Note this just takes over https://github.com/apache/spark/pull/21146

## How was this patch tested?

Existing tests.

Closes #22081 from srowen/SPARK-23654.

Authored-by: Sean Owen <srowen@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2018-08-16 12:34:23 -07:00
DB Tsai 5585c5765f
[SPARK-24420][BUILD] Upgrade ASM to 6.1 to support JDK9+
## What changes were proposed in this pull request?

Upgrade ASM to 6.1 to support JDK9+

## How was this patch tested?

Existing tests.

Author: DB Tsai <d_tsai@apple.com>

Closes #21459 from dbtsai/asm.
2018-07-03 10:13:48 -07:00
Marcelo Vanzin cc613b552e [PYSPARK] Update py4j to version 0.10.7. 2018-05-09 10:47:35 -07:00
Steve Loughran ce7ba2e98e [SPARK-23807][BUILD] Add Hadoop 3.1 profile with relevant POM fix ups
## What changes were proposed in this pull request?

1. Adds a `hadoop-3.1` profile build depending on the hadoop-3.1 artifacts.
1. In the hadoop-cloud module, adds an explicit hadoop-3.1 profile which switches from explicitly pulling in cloud connectors (hadoop-openstack, hadoop-aws, hadoop-azure) to depending on the hadoop-cloudstorage POM artifact, which pulls these in, has pre-excluded things like hadoop-common, and stays up to date with new connectors (hadoop-azuredatalake, hadoop-allyun). Goal: it becomes the Hadoop projects homework of keeping this clean, and the spark project doesn't need to handle new hadoop releases adding more dependencies.
1. the hadoop-cloud/hadoop-3.1 profile also declares support for jetty-ajax and jetty-util to ensure that these jars get into the distribution jar directory when needed by unshaded libraries.
1. Increases the curator and zookeeper versions to match those in hadoop-3, fixing spark core to build in sbt with the hadoop-3 dependencies.

## How was this patch tested?

* Everything this has been built and tested against both ASF Hadoop branch-3.1 and hadoop trunk.
* spark-shell was used to create connectors to all the stores and verify that file IO could take place.

The spark hive-1.2.1 JAR has problems here, as it's version check logic fails for Hadoop versions > 2.

This can be avoided with either of

* The hadoop JARs built to declare their version as Hadoop 2.11  `mvn install -DskipTests -DskipShade -Ddeclared.hadoop.version=2.11` . This is safe for local test runs, not for deployment (HDFS is very strict about cross-version deployment).
* A modified version of spark hive whose version check switch statement is happy with hadoop 3.

I've done both, with maven and SBT.

Three issues surfaced

1. A spark-core test failure —fixed in SPARK-23787.
1. SBT only: Zookeeper not being found in spark-core. Somehow curator 2.12.0 triggers some slightly different dependency resolution logic from previous versions, and Ivy was missing zookeeper.jar entirely. This patch adds the explicit declaration for all spark profiles, setting the ZK version = 3.4.9 for hadoop-3.1
1. Marking jetty-utils as provided in spark was stopping hadoop-azure from being able to instantiate the azure wasb:// client; it was using jetty-util-ajax, which could then not find a class in jetty-util.

Author: Steve Loughran <stevel@hortonworks.com>

Closes #20923 from steveloughran/cloud/SPARK-23807-hadoop-31.
2018-04-24 09:57:09 -07:00
gatorsmile 651f76153f [SPARK-23028] Bump master branch version to 2.4.0-SNAPSHOT
## What changes were proposed in this pull request?
This patch bumps the master branch version to `2.4.0-SNAPSHOT`.

## How was this patch tested?
N/A

Author: gatorsmile <gatorsmile@gmail.com>

Closes #20222 from gatorsmile/bump24.
2018-01-13 00:37:59 +08:00
Marcelo Vanzin cfcd746689 [SPARK-11035][CORE] Add in-process Spark app launcher.
This change adds a new launcher that allows applications to be run
in a separate thread in the same process as the calling code. To
achieve that, some code from the child process implementation was
moved to abstract classes that implement the common functionality,
and the new launcher inherits from those.

The new launcher was added as a new class, instead of implemented
as a new option to the existing SparkLauncher, to avoid ambigous
APIs. For example, SparkLauncher has ways to set the child app's
environment, modify SPARK_HOME, or control the logging of the
child process, none of which apply to in-process apps.

The in-process launcher has limitations: it needs Spark in the
context class loader of the calling thread, and it's bound by
Spark's current limitation of a single client-mode application
per JVM. It also relies on the recently added SparkApplication
trait to make sure different apps don't mess up each other's
configuration, so config isolation is currently limited to cluster mode.

I also chose to keep the same socket-based communication for in-process
apps, even though it might be possible to avoid it for in-process
mode. That helps both implementations share more code.

Tested with new and existing unit tests, and with a simple app that
uses the launcher; also made sure the app ran fine with older launcher
jar to check binary compatibility.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #19591 from vanzin/SPARK-11035.
2017-12-28 17:00:49 -06:00
Sital Kedia 444bce1c98 [SPARK-19112][CORE] Support for ZStandard codec
## What changes were proposed in this pull request?

Using zstd compression for Spark jobs spilling 100s of TBs of data, we could reduce the amount of data written to disk by as much as 50%. This translates to significant latency gain because of reduced disk io operations. There is a degradation CPU time by 2 - 5% because of zstd compression overhead, but for jobs which are bottlenecked by disk IO, this hit can be taken.

## Benchmark
Please note that this benchmark is using real world compute heavy production workload spilling TBs of data to disk

|         | zstd performance as compred to LZ4   |
| ------------- | -----:|
| spill/shuffle bytes    | -48% |
| cpu time    |    + 3% |
| cpu reservation time       |    -40%|
| latency     |     -40% |

## How was this patch tested?

Tested by running few jobs spilling large amount of data on the cluster and amount of intermediate data written to disk reduced by as much as 50%.

Author: Sital Kedia <skedia@fb.com>

Closes #18805 from sitalkedia/skedia/upstream_zstd.
2017-11-01 14:54:08 +01:00
Holden Karau 8fab7995d3 [SPARK-22167][R][BUILD] sparkr packaging issue allow zinc
## What changes were proposed in this pull request?

When zinc is running the pwd might be in the root of the project. A quick solution to this is to not go a level up incase we are in the root rather than root/core/. If we are in the root everything works fine, if we are in core add a script which goes and runs the level up

## How was this patch tested?

set -x in the SparkR install scripts.

Author: Holden Karau <holden@us.ibm.com>

Closes #19402 from holdenk/SPARK-22167-sparkr-packaging-issue-allow-zinc.
2017-10-02 11:46:51 -07:00
Marcelo Vanzin 74daf622de [SPARK-20642][CORE] Store FsHistoryProvider listing data in a KVStore.
The application listing is still generated from event logs, but is now stored
in a KVStore instance. By default an in-memory store is used, but a new config
allows setting a local disk path to store the data, in which case a LevelDB
store will be created.

The provider stores things internally using the public REST API types; I believe
this is better going forward since it will make it easier to get rid of the
internal history server API which is mostly redundant at this point.

I also added a finalizer to LevelDBIterator, to make sure that resources are
eventually released. This helps when code iterates but does not exhaust the
iterator, thus not triggering the auto-close code.

HistoryServerSuite was modified to not re-start the history server unnecessarily;
this makes the json validation tests run more quickly.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #18887 from vanzin/SPARK-20642.
2017-09-27 20:33:41 +08:00
Sean Owen 3d4dd14cd5 [SPARK-22066][BUILD] Update checkstyle to 8.2, enable it, fix violations
## What changes were proposed in this pull request?

Update plugins, including scala-maven-plugin, to latest versions. Update checkstyle to 8.2. Remove bogus checkstyle config and enable it. Fix existing and new Java checkstyle errors.

## How was this patch tested?

Existing tests

Author: Sean Owen <sowen@cloudera.com>

Closes #19282 from srowen/SPARK-22066.
2017-09-20 10:01:46 +01:00
Takeshi Yamamuro b78cf13bf0 [SPARK-21276][CORE] Update lz4-java to the latest (v1.4.0)
## What changes were proposed in this pull request?
This pr updated `lz4-java` to the latest (v1.4.0) and removed custom `LZ4BlockInputStream`. We currently use custom `LZ4BlockInputStream` to read concatenated byte stream in shuffle. But, this functionality has been implemented in the latest lz4-java (https://github.com/lz4/lz4-java/pull/105). So, we might update the latest to remove the custom `LZ4BlockInputStream`.

Major diffs between the latest release and v1.3.0 in the master are as follows (62f7547abb...6d4693f562);
- fixed NPE in XXHashFactory similarly
- Don't place resources in default package to support shading
- Fixes ByteBuffer methods failing to apply arrayOffset() for array-backed
- Try to load lz4-java from java.library.path, then fallback to bundled
- Add ppc64le binary
- Add s390x JNI binding
- Add basic LZ4 Frame v1.5.0 support
- enable aarch64 support for lz4-java
- Allow unsafeInstance() for ppc64le archiecture
- Add unsafeInstance support for AArch64
- Support 64-bit JNI build on Solaris
- Avoid over-allocating a buffer
- Allow EndMark to be incompressible for LZ4FrameInputStream.
- Concat byte stream

## How was this patch tested?
Existing tests.

Author: Takeshi Yamamuro <yamamuro@apache.org>

Closes #18883 from maropu/SPARK-21276.
2017-08-09 17:31:52 +02:00
Sean Owen d3f4a21196 [SPARK-15526][ML][FOLLOWUP] Make JPMML provided scope to avoid including unshaded JARs, and repromote to compile in MLlib
Following the comment at https://issues.apache.org/jira/browse/SPARK-15526?focusedCommentId=16086106&page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel#comment-16086106 -- this change actually needed a little more work to be complete.

This also marks JPMML as `provided` to make sure its JARs aren't included in the `jars` output, but then scopes to `compile` in `mllib`. This is how Guava is handled.

Checked result in `assembly/target/scala-2.11/jars` to verify there are no JPMML jars. Maven and SBT builds still work.

Author: Sean Owen <sowen@cloudera.com>

Closes #18637 from srowen/SPARK-15526.2.
2017-07-18 09:53:51 -07:00
Dongjoon Hyun c8d0aba198 [SPARK-21278][PYSPARK] Upgrade to Py4J 0.10.6
## What changes were proposed in this pull request?

This PR aims to bump Py4J in order to fix the following float/double bug.
Py4J 0.10.5 fixes this (https://github.com/bartdag/py4j/issues/272) and the latest Py4J is 0.10.6.

**BEFORE**
```
>>> df = spark.range(1)
>>> df.select(df['id'] + 17.133574204226083).show()
+--------------------+
|(id + 17.1335742042)|
+--------------------+
|       17.1335742042|
+--------------------+
```

**AFTER**
```
>>> df = spark.range(1)
>>> df.select(df['id'] + 17.133574204226083).show()
+-------------------------+
|(id + 17.133574204226083)|
+-------------------------+
|       17.133574204226083|
+-------------------------+
```

## How was this patch tested?

Manual.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #18546 from dongjoon-hyun/SPARK-21278.
2017-07-05 16:33:23 -07:00
Michael Gummelt a18d637112 [SPARK-20434][YARN][CORE] Move Hadoop delegation token code from yarn to core
## What changes were proposed in this pull request?

Move Hadoop delegation token code from `spark-yarn` to `spark-core`, so that other schedulers (such as Mesos), may use it.  In order to avoid exposing Hadoop interfaces in spark-core, the new Hadoop delegation token classes are kept private.  In order to provider backward compatiblity, and to allow YARN users to continue to load their own delegation token providers via Java service loading, the old YARN interfaces, as well as the client code that uses them, have been retained.

Summary:
- Move registered `yarn.security.ServiceCredentialProvider` classes from `spark-yarn` to `spark-core`.  Moved them into a new, private hierarchy under `HadoopDelegationTokenProvider`.  Client code in `HadoopDelegationTokenManager` now loads credentials from a whitelist of three providers (`HadoopFSDelegationTokenProvider`, `HiveDelegationTokenProvider`, `HBaseDelegationTokenProvider`), instead of service loading, which means that users are not able to implement their own delegation token providers, as they are in the `spark-yarn` module.

- The `yarn.security.ServiceCredentialProvider` interface has been kept for backwards compatibility, and to continue to allow YARN users to implement their own delegation token provider implementations.  Client code in YARN now fetches tokens via the new `YARNHadoopDelegationTokenManager` class, which fetches tokens from the core providers through `HadoopDelegationTokenManager`, as well as service loads them from `yarn.security.ServiceCredentialProvider`.

Old Hierarchy:

```
yarn.security.ServiceCredentialProvider (service loaded)
  HadoopFSCredentialProvider
  HiveCredentialProvider
  HBaseCredentialProvider
yarn.security.ConfigurableCredentialManager
```

New Hierarchy:

```
HadoopDelegationTokenManager
HadoopDelegationTokenProvider (not service loaded)
  HadoopFSDelegationTokenProvider
  HiveDelegationTokenProvider
  HBaseDelegationTokenProvider

yarn.security.ServiceCredentialProvider (service loaded)
yarn.security.YARNHadoopDelegationTokenManager
```
## How was this patch tested?

unit tests

Author: Michael Gummelt <mgummelt@mesosphere.io>
Author: Dr. Stefan Schimanski <sttts@mesosphere.io>

Closes #17723 from mgummelt/SPARK-20434-refactor-kerberos.
2017-06-15 11:46:00 -07:00
Josh Rosen f44c8a843c [SPARK-20453] Bump master branch version to 2.3.0-SNAPSHOT
This patch bumps the master branch version to `2.3.0-SNAPSHOT`.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #17753 from JoshRosen/SPARK-20453.
2017-04-24 21:48:04 -07:00
hyukjinkwon ad935f526f [SPARK-20343][BUILD] Add avro dependency in core POM to resolve build failure in SBT Hadoop 2.6 master on Jenkins
## What changes were proposed in this pull request?

This PR proposes to add

```
      <dependency>
        <groupId>org.apache.avro</groupId>
        <artifactId>avro</artifactId>
      </dependency>
```

in core POM to see if it resolves the build failure as below:

```
[error] /home/jenkins/workspace/spark-master-test-sbt-hadoop-2.6/core/src/main/scala/org/apache/spark/serializer/GenericAvroSerializer.scala:123: value createDatumWriter is not a member of org.apache.avro.generic.GenericData
[error]     writerCache.getOrElseUpdate(schema, GenericData.get.createDatumWriter(schema))
[error]
```

https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-sbt-hadoop-2.6/2770/consoleFull

## How was this patch tested?

I tried many ways but I was unable to reproduce this in my local. Sean also tried the way I did but he was also unable to reproduce this.

Please refer the comments in https://github.com/apache/spark/pull/17477#issuecomment-294094092

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #17642 from HyukjinKwon/SPARK-20343.
2017-04-16 14:36:42 +01:00
Ryan Williams afd9bc1d8a [SPARK-17807][CORE] split test-tags into test-JAR
Remove spark-tag's compile-scope dependency (and, indirectly, spark-core's compile-scope transitive-dependency) on scalatest by splitting test-oriented tags into spark-tags' test JAR.

Alternative to #16303.

Author: Ryan Williams <ryan.blake.williams@gmail.com>

Closes #16311 from ryan-williams/tt.
2016-12-21 16:37:20 -08:00
Reynold Xin c7c7265950 [SPARK-18695] Bump master branch version to 2.2.0-SNAPSHOT
## What changes were proposed in this pull request?
This patch bumps master branch version to 2.2.0-SNAPSHOT.

## How was this patch tested?
N/A

Author: Reynold Xin <rxin@databricks.com>

Closes #16126 from rxin/SPARK-18695.
2016-12-02 21:09:37 -08:00
Jagadeesan 595893d33a
[SPARK-17960][PYSPARK][UPGRADE TO PY4J 0.10.4]
## What changes were proposed in this pull request?

1) Upgrade the Py4J version on the Java side
2) Update the py4j src zip file we bundle with Spark

## How was this patch tested?

Existing doctests & unit tests pass

Author: Jagadeesan <as2@us.ibm.com>

Closes #15514 from jagadeesanas2/SPARK-17960.
2016-10-21 09:48:24 +01:00
Bryan Cutler 658c7147f5
[SPARK-17808][PYSPARK] Upgraded version of Pyrolite to 4.13
## What changes were proposed in this pull request?
Upgraded to a newer version of Pyrolite which supports serialization of a BinaryType StructField for PySpark.SQL

## How was this patch tested?
Added a unit test which fails with a raised ValueError when using the previous version of Pyrolite 4.9 and Python3

Author: Bryan Cutler <cutlerb@gmail.com>

Closes #15386 from BryanCutler/pyrolite-upgrade-SPARK-17808.
2016-10-11 08:29:52 +02:00
Marcelo Vanzin a4aeb7677b [SPARK-17639][BUILD] Add jce.jar to buildclasspath when building.
This was missing, preventing code that uses javax.crypto to properly
compile in Spark.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #15204 from vanzin/SPARK-17639.
2016-09-22 21:35:25 -07:00
Gurvinder Singh 92ce8d4849 [SPARK-15487][WEB UI] Spark Master UI to reverse proxy Application and Workers UI
## What changes were proposed in this pull request?

This pull request adds the functionality to enable accessing worker and application UI through master UI itself. Thus helps in accessing SparkUI when running spark cluster in closed networks e.g. Kubernetes. Cluster admin needs to expose only spark master UI and rest of the UIs can be in the private network, master UI will reverse proxy the connection request to corresponding resource. It adds the path for workers/application UIs as

WorkerUI: <http/https>://master-publicIP:<port>/target/workerID/
ApplicationUI: <http/https>://master-publicIP:<port>/target/appID/

This makes it easy for users to easily protect the Spark master cluster access by putting some reverse proxy e.g. https://github.com/bitly/oauth2_proxy

## How was this patch tested?

The functionality has been tested manually and there is a unit test too for testing access to worker UI with reverse proxy address.

pwendell bomeng BryanCutler can you please review it, thanks.

Author: Gurvinder Singh <gurvinder.singh@uninett.no>

Closes #13950 from gurvindersingh/rproxy.
2016-09-08 17:20:20 -07:00
Ferdinand Xu 4b4e329e49 [SPARK-5682][CORE] Add encrypted shuffle in spark
This patch is using Apache Commons Crypto library to enable shuffle encryption support.

Author: Ferdinand Xu <cheng.a.xu@intel.com>
Author: kellyzly <kellyzly@126.com>

Closes #8880 from winningsix/SPARK-10771.
2016-08-30 09:15:31 -07:00
Michael Gummelt 8e5475be3c [SPARK-16967] move mesos to module
## What changes were proposed in this pull request?

Move Mesos code into a mvn module

## How was this patch tested?

unit tests
manually submitting a client mode and cluster mode job
spark/mesos integration test suite

Author: Michael Gummelt <mgummelt@mesosphere.io>

Closes #14637 from mgummelt/mesos-module.
2016-08-26 12:25:22 -07:00
Sean Owen 0b3a4be92c [SPARK-16781][PYSPARK] java launched by PySpark as gateway may not be the same java used in the spark environment
## What changes were proposed in this pull request?

Update to py4j 0.10.3 to enable JAVA_HOME support

## How was this patch tested?

Pyspark tests

Author: Sean Owen <sowen@cloudera.com>

Closes #14748 from srowen/SPARK-16781.
2016-08-24 20:04:09 +01:00
Xin Ren 21a6dd2aef [SPARK-16535][BUILD] In pom.xml, remove groupId which is redundant definition and inherited from the parent
https://issues.apache.org/jira/browse/SPARK-16535

## What changes were proposed in this pull request?

When I scan through the pom.xml of sub projects, I found this warning as below and attached screenshot
```
Definition of groupId is redundant, because it's inherited from the parent
```
![screen shot 2016-07-13 at 3 13 11 pm](https://cloud.githubusercontent.com/assets/3925641/16823121/744f893e-4916-11e6-8a52-042f83b9db4e.png)

I've tried to remove some of the lines with groupId definition, and the build on my local machine is still ok.
```
<groupId>org.apache.spark</groupId>
```
As I just find now `<maven.version>3.3.9</maven.version>` is being used in Spark 2.x, and Maven-3 supports versionless parent elements: Maven 3 will remove the need to specify the parent version in sub modules. THIS is great (in Maven 3.1).

ref: http://stackoverflow.com/questions/3157240/maven-3-worth-it/3166762#3166762

## How was this patch tested?

I've tested by re-building the project, and build succeeded.

Author: Xin Ren <iamshrek@126.com>

Closes #14189 from keypointt/SPARK-16535.
2016-07-19 11:59:46 +01:00
Reynold Xin ffcb6e055a [SPARK-16477] Bump master version to 2.1.0-SNAPSHOT
## What changes were proposed in this pull request?
After SPARK-16476 (committed earlier today as #14128), we can finally bump the version number.

## How was this patch tested?
N/A

Author: Reynold Xin <rxin@databricks.com>

Closes #14130 from rxin/SPARK-16477.
2016-07-11 09:42:56 -07:00
Reynold Xin 5a52ba0f95 [SPARK-15851][BUILD] Fix the call of the bash script to enable proper run in Windows
## What changes were proposed in this pull request?
The way bash script `build/spark-build-info` is called from core/pom.xml prevents Spark building on Windows. Instead of calling the script directly we call bash and pass the script as an argument. This enables running it on Windows with bash installed which typically comes with Git.

This brings https://github.com/apache/spark/pull/13612 up-to-date and also addresses comments from the code review.

Closes #13612

## How was this patch tested?
I built manually (on a Mac) to verify it didn't break Mac compilation.

Author: Reynold Xin <rxin@databricks.com>
Author: avulanov <nashb@yandex.ru>

Closes #13691 from rxin/SPARK-15851.
2016-06-15 20:11:23 -07:00
Sean Owen 6151d2641f [MINOR] Clean up several build warnings, mostly due to internal use of old accumulators
## What changes were proposed in this pull request?

Another PR to clean up recent build warnings. This particularly cleans up several instances of the old accumulator API usage in tests that are straightforward to update. I think this qualifies as "minor".

## How was this patch tested?

Jenkins

Author: Sean Owen <sowen@cloudera.com>

Closes #13642 from srowen/BuildWarnings.
2016-06-14 09:40:07 -07:00
Dhruve Ashar fa4bc8ea8b [SPARK-14279][BUILD] Pick the spark version from pom
## What changes were proposed in this pull request?
Change the way spark picks up version information. Also embed the build information to better identify the spark version running.

More context can be found here : https://github.com/apache/spark/pull/12152

## How was this patch tested?
Ran the mvn and sbt builds to verify the version information was being displayed correctly on executing <code>spark-submit --version </code>

![image](https://cloud.githubusercontent.com/assets/7732317/15197251/f7c673a2-1795-11e6-8b2f-88f2a70cf1c1.png)

Author: Dhruve Ashar <dhruveashar@gmail.com>

Closes #13061 from dhruve/impr/SPARK-14279.
2016-06-06 09:42:50 -07:00
Sean Owen 122302cbf5 [SPARK-15290][BUILD] Move annotations, like @Since / @DeveloperApi, into spark-tags
## What changes were proposed in this pull request?

(See https://github.com/apache/spark/pull/12416 where most of this was already reviewed and committed; this is just the module structure and move part. This change does not move the annotations into test scope, which was the apparently problem last time.)

Rename `spark-test-tags` -> `spark-tags`; move common annotations like `Since` to `spark-tags`

## How was this patch tested?

Jenkins tests.

Author: Sean Owen <sowen@cloudera.com>

Closes #13074 from srowen/SPARK-15290.
2016-05-17 09:55:53 +01:00
Sean Owen f5576a052d [SPARK-12972][CORE] Update org.apache.httpcomponents.httpclient
## What changes were proposed in this pull request?

(Retry of https://github.com/apache/spark/pull/13049)

- update to httpclient 4.5 / httpcore 4.4
- remove some defunct exclusions
- manage httpmime version to match
- update selenium / httpunit to support 4.5 (possible now that Jetty 9 is used)

## How was this patch tested?

Jenkins tests. Also, locally running the same test command of one Jenkins profile that failed: `mvn -Phadoop-2.6 -Pyarn -Phive -Phive-thriftserver -Pkinesis-asl ...`

Author: Sean Owen <sowen@cloudera.com>

Closes #13117 from srowen/SPARK-12972.2.
2016-05-15 15:56:46 +01:00
Holden Karau 382dbc12bb [SPARK-15061][PYSPARK] Upgrade to Py4J 0.10.1
## What changes were proposed in this pull request?

This upgrades to Py4J 0.10.1 which reduces syscal overhead in Java gateway ( see https://github.com/bartdag/py4j/issues/201 ). Related https://issues.apache.org/jira/browse/SPARK-6728 .

## How was this patch tested?

Existing doctests & unit tests pass

Author: Holden Karau <holden@us.ibm.com>

Closes #13064 from holdenk/SPARK-15061-upgrade-to-py4j-0.10.1.
2016-05-13 08:59:18 +01:00
bomeng 81bf870848 [SPARK-14897][SQL] upgrade to jetty 9.2.16
## What changes were proposed in this pull request?

Since Jetty 8 is EOL (end of life) and has critical security issue [http://www.securityweek.com/critical-vulnerability-found-jetty-web-server], I think upgrading to 9 is necessary. I am using latest 9.2 since 9.3 requires Java 8+.

`javax.servlet` and `derby` were also upgraded since Jetty 9.2 needs corresponding version.

## How was this patch tested?

Manual test and current test cases should cover it.

Author: bomeng <bmeng@us.ibm.com>

Closes #12916 from bomeng/SPARK-14897.
2016-05-12 20:07:44 +01:00
mcheah b7fdc23ccc [SPARK-12154] Upgrade to Jersey 2
## What changes were proposed in this pull request?

Replace com.sun.jersey with org.glassfish.jersey. Changes to the Spark Web UI code were required to compile. The changes were relatively standard Jersey migration things.

## How was this patch tested?

I did a manual test for the standalone web APIs. Although I didn't test the functionality of the security filter itself, the code that changed non-trivially is how we actually register the filter. I attached a debugger to the Spark master and verified that the SecurityFilter code is indeed invoked upon hitting /api/v1/applications.

Author: mcheah <mcheah@palantir.com>

Closes #12715 from mccheah/feature/upgrade-jersey.
2016-05-05 10:51:03 +01:00
Yin Huai 9c7c42bc6a Revert "[SPARK-14613][ML] Add @Since into the matrix and vector classes in spark-mllib-local"
This reverts commit dae538a4d7.
2016-04-28 19:57:41 -07:00
Pravin Gadakh dae538a4d7 [SPARK-14613][ML] Add @Since into the matrix and vector classes in spark-mllib-local
## What changes were proposed in this pull request?

This PR adds `since` tag into the matrix and vector classes in spark-mllib-local.

## How was this patch tested?

Scala-style checks passed.

Author: Pravin Gadakh <prgadakh@in.ibm.com>

Closes #12416 from pravingadakh/SPARK-14613.
2016-04-28 15:59:18 -07:00
Sean Owen 9fa43a33b9 [SPARK-14612][ML] Consolidate the version of dependencies in mllib and mllib-local into one place
## What changes were proposed in this pull request?

Move json4s, breeze dependency declaration into parent

## How was this patch tested?

Should be no functional change, but Jenkins tests will test that.

Author: Sean Owen <sowen@cloudera.com>

Closes #12390 from srowen/SPARK-14612.
2016-04-14 10:48:17 -07:00
Josh Rosen 07cb323e7a [SPARK-13848][SPARK-5185] Update to Py4J 0.9.2 in order to fix classloading issue
This patch upgrades Py4J from 0.9.1 to 0.9.2 in order to include a patch which modifies Py4J to use the current thread's ContextClassLoader when performing reflection / class loading. This is necessary in order to fix [SPARK-5185](https://issues.apache.org/jira/browse/SPARK-5185), a longstanding issue affecting the use of `--jars` and `--packages` in PySpark.

In order to demonstrate that the fix works, I removed the workarounds which were added as part of [SPARK-6027](https://issues.apache.org/jira/browse/SPARK-6027) / #4779 and other patches.

Py4J diff: https://github.com/bartdag/py4j/compare/0.9.1...0.9.2

/cc zsxwing tdas davies brkyvz

Author: Josh Rosen <joshrosen@databricks.com>

Closes #11687 from JoshRosen/py4j-0.9.2.
2016-03-14 12:22:02 -07:00
Josh Rosen 289373b28c [SPARK-6363][BUILD] Make Scala 2.11 the default Scala version
This patch changes Spark's build to make Scala 2.11 the default Scala version. To be clear, this does not mean that Spark will stop supporting Scala 2.10: users will still be able to compile Spark for Scala 2.10 by following the instructions on the "Building Spark" page; however, it does mean that Scala 2.11 will be the default Scala version used by our CI builds (including pull request builds).

The Scala 2.11 compiler is faster than 2.10, so I think we'll be able to look forward to a slight speedup in our CI builds (it looks like it's about 2X faster for the Maven compile-only builds, for instance).

After this patch is merged, I'll update Jenkins to add new compile-only jobs to ensure that Scala 2.10 compilation doesn't break.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #10608 from JoshRosen/SPARK-6363.
2016-01-30 00:20:28 -08:00
Shixiong Zhu bc1babd63d [SPARK-7997][CORE] Remove Akka from Spark Core and Streaming
- Remove Akka dependency from core. Note: the streaming-akka project still uses Akka.
- Remove HttpFileServer
- Remove Akka configs from SparkConf and SSLOptions
- Rename `spark.akka.frameSize` to `spark.rpc.message.maxSize`. I think it's still worth to keep this config because using `DirectTaskResult` or `IndirectTaskResult`  depends on it.
- Update comments and docs

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10854 from zsxwing/remove-akka.
2016-01-22 21:20:04 -08:00
Reynold Xin ad1503f92e [SPARK-12667] Remove block manager's internal "external block store" API
This pull request removes the external block store API. This is rarely used, and the file system interface is actually a better, more standard way to interact with external storage systems.

There are some other things to remove also, as pointed out by JoshRosen. We will do those as follow-up pull requests.

Author: Reynold Xin <rxin@databricks.com>

Closes #10752 from rxin/remove-offheap.
2016-01-15 12:03:28 -08:00
Shixiong Zhu 4f60651cbe [SPARK-12652][PYSPARK] Upgrade Py4J to 0.9.1
- [x] Upgrade Py4J to 0.9.1
- [x] SPARK-12657: Revert SPARK-12617
- [x] SPARK-12658: Revert SPARK-12511
  - Still keep the change that only reading checkpoint once. This is a manual change and worth to take a look carefully. bfd4b5c040
- [x] Verify no leak any more after reverting our workarounds

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10692 from zsxwing/py4j-0.9.1.
2016-01-12 14:27:05 -08:00
Reynold Xin f496031bd2 Bump master version to 2.0.0-SNAPSHOT.
Author: Reynold Xin <rxin@databricks.com>

Closes #10387 from rxin/version-bump.
2015-12-19 15:13:05 -08:00
Josh Rosen 34e7093c11 [SPARK-12065] Upgrade Tachyon from 0.8.1 to 0.8.2
This commit upgrades the Tachyon dependency from 0.8.1 to 0.8.2.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #10054 from JoshRosen/upgrade-to-tachyon-0.8.2.
2015-12-01 11:49:20 -08:00
Davies Liu 3c025087b5 Revert "[SPARK-11271][SPARK-11016][CORE] Use Spark BitSet instead of RoaringBitmap to reduce memory usage"
This reverts commit e209fa271a.
2015-11-16 14:50:38 -08:00
Josh Rosen 529a1d3380 [SPARK-6152] Use shaded ASM5 to support closure cleaning of Java 8 compiled classes
This patch modifies Spark's closure cleaner (and a few other places) to use ASM 5, which is necessary in order to support cleaning of closures that were compiled by Java 8.

In order to avoid ASM dependency conflicts, Spark excludes ASM from all of its dependencies and uses a shaded version of ASM 4 that comes from `reflectasm` (see [SPARK-782](https://issues.apache.org/jira/browse/SPARK-782) and #232). This patch updates Spark to use a shaded version of ASM 5.0.4 that was published by the Apache XBean project; the POM used to create the shaded artifact can be found at https://github.com/apache/geronimo-xbean/blob/xbean-4.4/xbean-asm5-shaded/pom.xml.

http://movingfulcrum.tumblr.com/post/80826553604/asm-framework-50-the-missing-migration-guide was a useful resource while upgrading the code to use the new ASM5 opcodes.

I also added a new regression tests in the `java8-tests` subproject; the existing tests were insufficient to catch this bug, which only affected Scala 2.11 user code which was compiled targeting Java 8.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #9512 from JoshRosen/SPARK-6152.
2015-11-11 11:16:39 -08:00
Calvin Jia 476f4348e2 [SPARK-11236] [TEST-MAVEN] [TEST-HADOOP1.0] [CORE] Update Tachyon dependency 0.7.1 -> 0.8.1
This is a reopening of #9204 which failed hadoop1 sbt tests.

With the original PR, a classpath issue would occur due to the MIMA plugin pulling in hadoop-2.2 dependencies regardless of the hadoop version when building the `oldDeps` project. These affect the hadoop1 sbt build because they are placed in `lib_managed` and Tachyon 0.8.0's default hadoop version is 2.2.

Author: Calvin Jia <jia.calvin@gmail.com>

Closes #9395 from calvinjia/spark-11236.
2015-11-02 17:02:31 -08:00
Liang-Chi Hsieh e209fa271a [SPARK-11271][SPARK-11016][CORE] Use Spark BitSet instead of RoaringBitmap to reduce memory usage
JIRA: https://issues.apache.org/jira/browse/SPARK-11271

As reported in the JIRA ticket, when there are too many tasks, the memory usage of MapStatus will cause problem. Use BitSet instead of RoaringBitMap should be more efficient in memory usage.

Author: Liang-Chi Hsieh <viirya@appier.com>

Closes #9243 from viirya/mapstatus-bitset.
2015-11-02 08:52:52 +00:00