Commit graph

436 commits

Author SHA1 Message Date
Michael Armbrust c74b07fa94 [SPARK-5166][SPARK-5247][SPARK-5258][SQL] API Cleanup / Documentation
Author: Michael Armbrust <michael@databricks.com>

Closes #4642 from marmbrus/docs and squashes the following commits:

d291c34 [Michael Armbrust] python tests
9be66e3 [Michael Armbrust] comments
d56afc2 [Michael Armbrust] fix style
f004747 [Michael Armbrust] fix build
c4a907b [Michael Armbrust] fix tests
42e2b73 [Michael Armbrust] [SQL] Documentation / API Clean-up.
2015-02-17 10:21:17 -08:00
Reynold Xin d380f324c6 [SPARK-5853][SQL] Schema support in Row.
Author: Reynold Xin <rxin@databricks.com>

Closes #4640 from rxin/SPARK-5853 and squashes the following commits:

9c6f569 [Reynold Xin] [SPARK-5853][SQL] Schema support in Row.
2015-02-16 20:42:57 -08:00
Yin Huai e189cbb052 [SPARK-4865][SQL]Include temporary tables in SHOW TABLES
This PR adds a `ShowTablesCommand` to support `SHOW TABLES [IN databaseName]` SQL command. The result of `SHOW TABLE` has two columns, `tableName` and `isTemporary`. For temporary tables, the value of `isTemporary` column will be `false`.

JIRA: https://issues.apache.org/jira/browse/SPARK-4865

Author: Yin Huai <yhuai@databricks.com>

Closes #4618 from yhuai/showTablesCommand and squashes the following commits:

0c09791 [Yin Huai] Use ShowTablesCommand.
85ee76d [Yin Huai] Since SHOW TABLES is not a Hive native command any more and we will not see "OK" (originally generated by Hive's driver), use SHOW DATABASES in the test.
94bacac [Yin Huai] Add SHOW TABLES to the list of noExplainCommands.
d71ed09 [Yin Huai] Fix test.
a4a6ec3 [Yin Huai] Add SHOW TABLE command.
2015-02-16 15:59:23 -08:00
Yin Huai f3ff1eb298 [SPARK-5839][SQL]HiveMetastoreCatalog does not recognize table names and aliases of data source tables.
JIRA: https://issues.apache.org/jira/browse/SPARK-5839

Author: Yin Huai <yhuai@databricks.com>

Closes #4626 from yhuai/SPARK-5839 and squashes the following commits:

f779d85 [Yin Huai] Use subqeury to wrap replaced ParquetRelation.
2695f13 [Yin Huai] Merge remote-tracking branch 'upstream/master' into SPARK-5839
f1ba6ca [Yin Huai] Address comment.
2c7fa08 [Yin Huai] Use Subqueries to wrap a data source table.
2015-02-16 15:54:01 -08:00
Yin Huai 5b6cd65cd6 [SPARK-5746][SQL] Check invalid cases for the write path of data source API
JIRA: https://issues.apache.org/jira/browse/SPARK-5746

liancheng marmbrus

Author: Yin Huai <yhuai@databricks.com>

Closes #4617 from yhuai/insertOverwrite and squashes the following commits:

8e3019d [Yin Huai] Fix compilation error.
499e8e7 [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertOverwrite
e76e85a [Yin Huai] Address comments.
ac31b3c [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertOverwrite
f30bdad [Yin Huai] Use toDF.
99da57e [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertOverwrite
6b7545c [Yin Huai] Add a pre write check to the data source API.
a88c516 [Yin Huai] DDLParser will take a parsering function to take care CTAS statements.
2015-02-16 15:51:59 -08:00
Cheng Lian 6f54dee661 [SPARK-5296] [SQL] Add more filter types for data sources API
This PR adds the following filter types for data sources API:

- `IsNull`
- `IsNotNull`
- `Not`
- `And`
- `Or`

The code which converts Catalyst predicate expressions to data sources filters is very similar to filter conversion logics in `ParquetFilters` which converts Catalyst predicates to Parquet filter predicates. In this way we can support nested AND/OR/NOT predicates without changing current `BaseScan` type hierarchy.

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Author: Cheng Lian <lian@databricks.com>

This patch had conflicts when merged, resolved by
Committer: Michael Armbrust <michael@databricks.com>

Closes #4623 from liancheng/more-fiters and squashes the following commits:

1b296f4 [Cheng Lian] Add more filter types for data sources API
2015-02-16 12:48:55 -08:00
Liang-Chi Hsieh 5c78be7a51 [SPARK-5799][SQL] Compute aggregation function on specified numeric columns
Compute aggregation function on specified numeric columns. For example:

    val df = Seq(("a", 1, 0, "b"), ("b", 2, 4, "c"), ("a", 2, 3, "d")).toDataFrame("key", "value1", "value2", "rest")
    df.groupBy("key").min("value2")

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #4592 from viirya/specific_cols_agg and squashes the following commits:

9446896 [Liang-Chi Hsieh] For comments.
314c4cd [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into specific_cols_agg
353fad7 [Liang-Chi Hsieh] For python unit tests.
54ed0c4 [Liang-Chi Hsieh] Address comments.
b079e6b [Liang-Chi Hsieh] Remove duplicate codes.
55100fb [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into specific_cols_agg
880c2ac [Liang-Chi Hsieh] Fix Python style checks.
4c63a01 [Liang-Chi Hsieh] Fix pyspark.
b1a24fc [Liang-Chi Hsieh] Address comments.
2592f29 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into specific_cols_agg
27069c3 [Liang-Chi Hsieh] Combine functions and add varargs annotation.
371a3f7 [Liang-Chi Hsieh] Compute aggregation function on specified numeric columns.
2015-02-16 10:06:11 -08:00
Cheng Lian 3ce58cf9c0 [SPARK-4553] [SPARK-5767] [SQL] Wires Parquet data source with the newly introduced write support for data source API
This PR migrates the Parquet data source to the new data source write support API.  Now users can also overwriting and appending to existing tables. Notice that inserting into partitioned tables is not supported yet.

When Parquet data source is enabled, insertion to Hive Metastore Parquet tables is also fullfilled by the Parquet data source. This is done by the newly introduced `HiveMetastoreCatalog.ParquetConversions` rule, which is a "proper" implementation of the original hacky `HiveStrategies.ParquetConversion`. The latter is still preserved, and can be removed together with the old Parquet support in the future.

TODO:

- [x] Update outdated comments in `newParquet.scala`.

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Author: Cheng Lian <lian@databricks.com>

Closes #4563 from liancheng/parquet-refining and squashes the following commits:

fa98d27 [Cheng Lian] Fixes test cases which should disable off Parquet data source
2476e82 [Cheng Lian] Fixes compilation error introduced during rebasing
a83d290 [Cheng Lian] Passes Hive Metastore partitioning information to ParquetRelation2
2015-02-16 01:38:31 -08:00
Reynold Xin e98dfe627c [SPARK-5752][SQL] Don't implicitly convert RDDs directly to DataFrames
- The old implicit would convert RDDs directly to DataFrames, and that added too many methods.
- toDataFrame -> toDF
- Dsl -> functions
- implicits moved into SQLContext.implicits
- addColumn -> withColumn
- renameColumn -> withColumnRenamed

Python changes:
- toDataFrame -> toDF
- Dsl -> functions package
- addColumn -> withColumn
- renameColumn -> withColumnRenamed
- add toDF functions to RDD on SQLContext init
- add flatMap to DataFrame

Author: Reynold Xin <rxin@databricks.com>
Author: Davies Liu <davies@databricks.com>

Closes #4556 from rxin/SPARK-5752 and squashes the following commits:

5ef9910 [Reynold Xin] More fix
61d3fca [Reynold Xin] Merge branch 'df5' of github.com:davies/spark into SPARK-5752
ff5832c [Reynold Xin] Fix python
749c675 [Reynold Xin] count(*) fixes.
5806df0 [Reynold Xin] Fix build break again.
d941f3d [Reynold Xin] Fixed explode compilation break.
fe1267a [Davies Liu] flatMap
c4afb8e [Reynold Xin] style
d9de47f [Davies Liu] add comment
b783994 [Davies Liu] add comment for toDF
e2154e5 [Davies Liu] schema() -> schema
3a1004f [Davies Liu] Dsl -> functions, toDF()
fb256af [Reynold Xin] - toDataFrame -> toDF - Dsl -> functions - implicits moved into SQLContext.implicits - addColumn -> withColumn - renameColumn -> withColumnRenamed
0dd74eb [Reynold Xin] [SPARK-5752][SQL] Don't implicitly convert RDDs directly to DataFrames
97dd47c [Davies Liu] fix mistake
6168f74 [Davies Liu] fix test
1fc0199 [Davies Liu] fix test
a075cd5 [Davies Liu] clean up, toPandas
663d314 [Davies Liu] add test for agg('*')
9e214d5 [Reynold Xin] count(*) fixes.
1ed7136 [Reynold Xin] Fix build break again.
921b2e3 [Reynold Xin] Fixed explode compilation break.
14698d4 [Davies Liu] flatMap
ba3e12d [Reynold Xin] style
d08c92d [Davies Liu] add comment
5c8b524 [Davies Liu] add comment for toDF
a4e5e66 [Davies Liu] schema() -> schema
d377fc9 [Davies Liu] Dsl -> functions, toDF()
6b3086c [Reynold Xin] - toDataFrame -> toDF - Dsl -> functions - implicits moved into SQLContext.implicits - addColumn -> withColumn - renameColumn -> withColumnRenamed
807e8b1 [Reynold Xin] [SPARK-5752][SQL] Don't implicitly convert RDDs directly to DataFrames
2015-02-13 23:03:22 -08:00
Yin Huai 1d0596a16e [SPARK-3299][SQL]Public API in SQLContext to list tables
https://issues.apache.org/jira/browse/SPARK-3299

Author: Yin Huai <yhuai@databricks.com>

Closes #4547 from yhuai/tables and squashes the following commits:

6c8f92e [Yin Huai] Add tableNames.
acbb281 [Yin Huai] Update Python test.
7793dcb [Yin Huai] Fix scala test.
572870d [Yin Huai] Address comments.
aba2e88 [Yin Huai] Format.
12c86df [Yin Huai] Add tables() to SQLContext to return a DataFrame containing existing tables.
2015-02-12 18:08:01 -08:00
Yin Huai c025a46882 [SQL] Move SaveMode to SQL package.
Author: Yin Huai <yhuai@databricks.com>

Closes #4542 from yhuai/moveSaveMode and squashes the following commits:

65a4425 [Yin Huai] Move SaveMode to sql package.
2015-02-12 15:32:17 -08:00
Michael Armbrust ee04a8b19b [SPARK-5573][SQL] Add explode to dataframes
Author: Michael Armbrust <michael@databricks.com>

Closes #4546 from marmbrus/explode and squashes the following commits:

eefd33a [Michael Armbrust] whitespace
a8d496c [Michael Armbrust] Merge remote-tracking branch 'apache/master' into explode
4af740e [Michael Armbrust] Merge remote-tracking branch 'origin/master' into explode
dc86a5c [Michael Armbrust] simple version
d633d01 [Michael Armbrust] add scala specific
950707a [Michael Armbrust] fix comments
ba8854c [Michael Armbrust] [SPARK-5573][SQL] Add explode to dataframes
2015-02-12 15:19:19 -08:00
Yin Huai c352ffbdb9 [SPARK-5758][SQL] Use LongType as the default type for integers in JSON schema inference.
Author: Yin Huai <yhuai@databricks.com>

Closes #4544 from yhuai/jsonUseLongTypeByDefault and squashes the following commits:

6e2ffc2 [Yin Huai] Use LongType as the default type for integers in JSON schema inference.
2015-02-12 15:17:25 -08:00
Michael Armbrust aa4ca8b873 [SQL] Improve error messages
Author: Michael Armbrust <michael@databricks.com>
Author: wangfei <wangfei1@huawei.com>

Closes #4558 from marmbrus/errorMessages and squashes the following commits:

5e5ab50 [Michael Armbrust] Merge pull request #15 from scwf/errorMessages
fa38881 [wangfei] fix for grouping__id
f279a71 [wangfei] make right references for ScriptTransformation
d29fbde [Michael Armbrust] extra case
1a797b4 [Michael Armbrust] comments
d4e9015 [Michael Armbrust] add comment
af9e668 [Michael Armbrust] no braces
34eb3a4 [Michael Armbrust] more work
6197cd5 [Michael Armbrust] [SQL] Better error messages for analysis failures
2015-02-12 13:11:28 -08:00
Reynold Xin d931b01dca [SQL] Two DataFrame fixes.
- Removed DataFrame.apply for projection & filtering since they are extremely confusing.
- Added implicits for RDD[Int], RDD[Long], and RDD[String]

Author: Reynold Xin <rxin@databricks.com>

Closes #4543 from rxin/df-cleanup and squashes the following commits:

81ec915 [Reynold Xin] [SQL] More DataFrame fixes.
2015-02-11 18:32:48 -08:00
Michael Armbrust a60d2b70ad [SPARK-5454] More robust handling of self joins
Also I fix a bunch of bad output in test cases.

Author: Michael Armbrust <michael@databricks.com>

Closes #4520 from marmbrus/selfJoin and squashes the following commits:

4f4a85c [Michael Armbrust] comments
49c8e26 [Michael Armbrust] fix tests
6fc38de [Michael Armbrust] fix style
55d64b3 [Michael Armbrust] fix dataframe selfjoins
2015-02-11 12:31:56 -08:00
Patrick Wendell 7e2f8821e0 HOTFIX: Java 6 compilation error in Spark SQL 2015-02-10 22:43:32 -08:00
Reynold Xin b8f88d3272 [SPARK-5702][SQL] Allow short names for built-in data sources.
Also took the chance to fixed up some style ...

Author: Reynold Xin <rxin@databricks.com>

Closes #4489 from rxin/SPARK-5702 and squashes the following commits:

74f42e3 [Reynold Xin] [SPARK-5702][SQL] Allow short names for built-in data sources.
2015-02-10 20:40:21 -08:00
Reynold Xin 7e24249af1 [SQL][DataFrame] Fix column computability bug.
Do not recursively strip out projects. Only strip the first level project.

```scala
df("colA") + df("colB").as("colC")
```

Previously, the above would construct an invalid plan.

Author: Reynold Xin <rxin@databricks.com>

Closes #4519 from rxin/computability and squashes the following commits:

87ff763 [Reynold Xin] Code review feedback.
015c4fc [Reynold Xin] [SQL][DataFrame] Fix column computability.
2015-02-10 19:50:44 -08:00
Davies Liu ea60284095 [SPARK-5704] [SQL] [PySpark] createDataFrame from RDD with columns
Deprecate inferSchema() and applySchema(), use createDataFrame() instead, which could take an optional `schema` to create an DataFrame from an RDD. The `schema` could be StructType or list of names of columns.

Author: Davies Liu <davies@databricks.com>

Closes #4498 from davies/create and squashes the following commits:

08469c1 [Davies Liu] remove Scala/Java API for now
c80a7a9 [Davies Liu] fix hive test
d1bd8f2 [Davies Liu] cleanup applySchema
9526e97 [Davies Liu] createDataFrame from RDD with columns
2015-02-10 19:40:12 -08:00
Cheng Hao a60aea86b4 [SPARK-5683] [SQL] Avoid multiple json generator created
Author: Cheng Hao <hao.cheng@intel.com>

Closes #4468 from chenghao-intel/json and squashes the following commits:

aeb7801 [Cheng Hao] avoid multiple json generator created
2015-02-10 18:19:56 -08:00
Michael Armbrust 6195e2473b [SQL] Add an exception for analysis errors.
Also start from the bottom so we show the first error instead of the top error.

Author: Michael Armbrust <michael@databricks.com>

Closes #4439 from marmbrus/analysisException and squashes the following commits:

45862a0 [Michael Armbrust] fix hive test
a773bba [Michael Armbrust] Merge remote-tracking branch 'origin/master' into analysisException
f88079f [Michael Armbrust] update more cases
fede90a [Michael Armbrust] newline
fbf4bc3 [Michael Armbrust] move to sql
6235db4 [Michael Armbrust] [SQL] Add an exception for analysis errors.
2015-02-10 17:32:42 -08:00
Yin Huai aaf50d05c7 [SPARK-5658][SQL] Finalize DDL and write support APIs
https://issues.apache.org/jira/browse/SPARK-5658

Author: Yin Huai <yhuai@databricks.com>

This patch had conflicts when merged, resolved by
Committer: Michael Armbrust <michael@databricks.com>

Closes #4446 from yhuai/writeSupportFollowup and squashes the following commits:

f3a96f7 [Yin Huai] davies's comments.
225ff71 [Yin Huai] Use Scala TestHiveContext to initialize the Python HiveContext in Python tests.
2306f93 [Yin Huai] Style.
2091fcd [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupportFollowup
537e28f [Yin Huai] Correctly clean up temp data.
ae4649e [Yin Huai] Fix Python test.
609129c [Yin Huai] Doc format.
92b6659 [Yin Huai] Python doc and other minor updates.
cbc717f [Yin Huai] Rename dataSourceName to source.
d1c12d3 [Yin Huai] No need to delete the duplicate rule since it has been removed in master.
22cfa70 [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupportFollowup
d91ecb8 [Yin Huai] Fix test.
4c76d78 [Yin Huai] Simplify APIs.
3abc215 [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupportFollowup
0832ce4 [Yin Huai] Fix test.
98e7cdb [Yin Huai] Python style.
2bf44ef [Yin Huai] Python APIs.
c204967 [Yin Huai] Format
a10223d [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupportFollowup
9ff97d8 [Yin Huai] Add SaveMode to saveAsTable.
9b6e570 [Yin Huai] Update doc.
c2be775 [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupportFollowup
99950a2 [Yin Huai] Use Java enum for SaveMode.
4679665 [Yin Huai] Remove duplicate rule.
77d89dc [Yin Huai] Update doc.
e04d908 [Yin Huai] Move import and add (Scala-specific) to scala APIs.
cf5703d [Yin Huai] Add checkAnswer to Java tests.
7db95ff [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupportFollowup
6dfd386 [Yin Huai] Add java test.
f2f33ef [Yin Huai] Fix test.
e702386 [Yin Huai] Apache header.
b1e9b1b [Yin Huai] Format.
ed4e1b4 [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupportFollowup
af9e9b3 [Yin Huai] DDL and write support API followup.
2a6213a [Yin Huai] Update API names.
e6a0b77 [Yin Huai] Update test.
43bae01 [Yin Huai] Remove createTable from HiveContext.
5ffc372 [Yin Huai] Add more load APIs to SQLContext.
5390743 [Yin Huai] Add more save APIs to DataFrame.
2015-02-10 17:29:52 -08:00
Michael Armbrust de80b1ba4d [SQL] Add toString to DataFrame/Column
Author: Michael Armbrust <michael@databricks.com>

Closes #4436 from marmbrus/dfToString and squashes the following commits:

8a3c35f [Michael Armbrust] Merge remote-tracking branch 'origin/master' into dfToString
b72a81b [Michael Armbrust] add toString
2015-02-10 13:14:01 -08:00
Wenchen Fan 0ee53ebce9 [SPARK-2096][SQL] support dot notation on array of struct
~~The rule is simple: If you want `a.b` work, then `a` must be some level of nested array of struct(level 0 means just a StructType). And the result of `a.b` is same level of nested array of b-type.
An optimization is: the resolve chain looks like `Attribute -> GetItem -> GetField -> GetField ...`, so we could transmit the nested array information between `GetItem` and `GetField` to avoid repeated computation of `innerDataType` and `containsNullList` of that nested array.~~
marmbrus Could you take a look?

to evaluate `a.b`, if `a` is array of struct, then `a.b` means get field `b` on each element of `a`, and return a result of array.

Author: Wenchen Fan <cloud0fan@outlook.com>

Closes #2405 from cloud-fan/nested-array-dot and squashes the following commits:

08a228a [Wenchen Fan] support dot notation on array of struct
2015-02-09 16:39:34 -08:00
Cheng Lian c4021401e3 [SQL] [Minor] HiveParquetSuite was disabled by mistake, re-enable them
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Author: Cheng Lian <lian@databricks.com>

Closes #4440 from liancheng/parquet-oops and squashes the following commits:

f21ede4 [Cheng Lian] HiveParquetSuite was disabled by mistake, re-enable them.
2015-02-06 15:23:42 -08:00
Michael Armbrust 76c4bf59f6 [SQL] Use TestSQLContext in Java tests
Sometimes tests were failing due to the creation of multiple `SparkContext`s in a single JVM.

Author: Michael Armbrust <michael@databricks.com>

Closes #4441 from marmbrus/javaTests and squashes the following commits:

657b1e0 [Michael Armbrust] [SQL] Use TestSQLContext in Java tests
2015-02-06 15:11:02 -08:00
Yin Huai 3eccf29ce0 [SPARK-5595][SPARK-5603][SQL] Add a rule to do PreInsert type casting and field renaming and invalidating in memory cache after INSERT
This PR adds a rule to Analyzer that will add preinsert data type casting and field renaming to the select clause in an `INSERT INTO/OVERWRITE` statement. Also, with the change of this PR, we always invalidate our in memory data cache after inserting into a BaseRelation.

cc marmbrus liancheng

Author: Yin Huai <yhuai@databricks.com>

Closes #4373 from yhuai/insertFollowUp and squashes the following commits:

08237a7 [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertFollowUp
316542e [Yin Huai] Doc update.
c9ccfeb [Yin Huai] Revert a unnecessary change.
84aecc4 [Yin Huai] Address comments.
1951fe1 [Yin Huai] Merge remote-tracking branch 'upstream/master'
c18da34 [Yin Huai] Invalidate cache after insert.
727f21a [Yin Huai] Preinsert casting and renaming.
2015-02-06 12:38:07 -08:00
Reynold Xin 7dc4965f34 [SPARK-5639][SQL] Support DataFrame.renameColumn.
Author: Reynold Xin <rxin@databricks.com>

Closes #4410 from rxin/df-renameCol and squashes the following commits:

a6a796e [Reynold Xin] [SPARK-5639][SQL] Support DataFrame.renameColumn.
2015-02-05 23:02:40 -08:00
Reynold Xin e8a5d50a96 [SPARK-5638][SQL] Add a config flag to disable eager analysis of DataFrames
Author: Reynold Xin <rxin@databricks.com>

Closes #4408 from rxin/df-config-eager and squashes the following commits:

c0204cf [Reynold Xin] [SPARK-5638][SQL] Add a config flag to disable eager analysis of DataFrames.
2015-02-05 18:07:10 -08:00
Cheng Lian a9ed51178c [SPARK-5182] [SPARK-5528] [SPARK-5509] [SPARK-3575] [SQL] Parquet data source improvements
This PR adds three major improvements to Parquet data source:

1.  Partition discovery

    While reading Parquet files resides in Hive style partition directories, `ParquetRelation2` automatically discovers partitioning information and infers partition column types.

    This is also a partial work for [SPARK-5182] [1], which aims to provide first class partitioning support for the data source API.  Related code in this PR can be easily extracted to the data source API level in future versions.

1.  Schema merging

    When enabled, Parquet data source collects schema information from all Parquet part-files and tries to merge them.  Exceptions are thrown when incompatible schemas are detected.  This feature is controlled by data source option `parquet.mergeSchema`, and is enabled by default.

1.  Metastore Parquet table conversion moved to analysis phase

    This greatly simplifies the conversion logic.  `ParquetConversion` strategy can be removed once the old Parquet implementation is removed in the future.

This version of Parquet data source aims to entirely replace the old Parquet implementation.  However, the old version hasn't been removed yet.  Users can fall back to the old version by turning off SQL configuration `spark.sql.parquet.useDataSourceApi`.

Other JIRA tickets fixed as side effects in this PR:

- [SPARK-5509] [3]: `EqualTo` now uses a proper `Ordering` to compare binary types.

- [SPARK-3575] [4]: Metastore schema is now preserved and passed to `ParquetRelation2` via data source option `parquet.metastoreSchema`.

TODO:

- [ ] More test cases for partition discovery
- [x] Fix write path after data source write support (#4294) is merged

      It turned out to be non-trivial to fall back to old Parquet implementation on the write path when Parquet data source is enabled.  Since we're planning to include data source write support in 1.3.0, I simply ignored two test cases involving Parquet insertion for now.

- [ ] Fix outdated comments and documentations

PS: This PR looks big, but more than a half of the changed lines in this PR are trivial changes to test cases. To test Parquet with and without the new data source, almost all Parquet test cases are moved into wrapper driver functions. This introduces hundreds of lines of changes.

[1]: https://issues.apache.org/jira/browse/SPARK-5182
[2]: https://issues.apache.org/jira/browse/SPARK-5528
[3]: https://issues.apache.org/jira/browse/SPARK-5509
[4]: https://issues.apache.org/jira/browse/SPARK-3575

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Author: Cheng Lian <lian@databricks.com>

Closes #4308 from liancheng/parquet-partition-discovery and squashes the following commits:

b6946e6 [Cheng Lian] Fixes MiMA issues, addresses comments
8232e17 [Cheng Lian] Write support for Parquet data source
a49bd28 [Cheng Lian] Fixes spelling typo in trait name "CreateableRelationProvider"
808380f [Cheng Lian] Fixes issues introduced while rebasing
50dd8d1 [Cheng Lian] Addresses @rxin's comment, fixes UDT schema merging
adf2aae [Cheng Lian] Fixes compilation error introduced while rebasing
4e0175f [Cheng Lian] Fixes Python Parquet API, we need Py4J array to call varargs method
0d8ec1d [Cheng Lian] Adds more test cases
b35c8c6 [Cheng Lian] Fixes some typos and outdated comments
dd704fd [Cheng Lian] Fixes Python Parquet API
596c312 [Cheng Lian] Uses switch to control whether use Parquet data source or not
7d0f7a2 [Cheng Lian] Fixes Metastore Parquet table conversion
a1896c7 [Cheng Lian] Fixes all existing Parquet test suites except for ParquetMetastoreSuite
5654c9d [Cheng Lian] Draft version of Parquet partition discovery and schema merging
2015-02-05 15:29:56 -08:00
OopsOutOfMemory 4d8d070c4f [SPARK-5135][SQL] Add support for describe table to DDL in SQLContext
Hi, rxin marmbrus
I considered your suggestion (in #4127) and now re-write it. This is now up-to-date.
Could u please review it ?

Author: OopsOutOfMemory <victorshengli@126.com>

Closes #4227 from OopsOutOfMemory/describe and squashes the following commits:

053826f [OopsOutOfMemory] describe
2015-02-05 13:07:48 -08:00
wangfei a83936e109 [SPARK-5617][SQL] fix test failure of SQLQuerySuite
SQLQuerySuite test failure:
[info] - simple select (22 milliseconds)
[info] - sorting (722 milliseconds)
[info] - external sorting (728 milliseconds)
[info] - limit (95 milliseconds)
[info] - date row *** FAILED *** (35 milliseconds)
[info]   Results do not match for query:
[info]   'Limit 1
[info]    'Project [CAST(2015-01-28, DateType) AS c0#3630]
[info]     'UnresolvedRelation [testData], None
[info]
[info]   == Analyzed Plan ==
[info]   Limit 1
[info]    Project [CAST(2015-01-28, DateType) AS c0#3630]
[info]     LogicalRDD [key#0,value#1], MapPartitionsRDD[1] at mapPartitions at ExistingRDD.scala:35
[info]
[info]   == Physical Plan ==
[info]   Limit 1
[info]    Project [16463 AS c0#3630]
[info]     PhysicalRDD [key#0,value#1], MapPartitionsRDD[1] at mapPartitions at ExistingRDD.scala:35
[info]
[info]   == Results ==
[info]   !== Correct Answer - 1 ==   == Spark Answer - 1 ==
[info]   ![2015-01-28]               [2015-01-27] (QueryTest.scala:77)
[info]   org.scalatest.exceptions.TestFailedException:
[info]   at org.scalatest.Assertions$class.newAssertionFailedException(Assertions.scala:495)
[info]   at org.scalatest.FunSuite.newAssertionFailedException(FunSuite.scala:1555)
[info]   at org.scalatest.Assertions$class.fail(Assertions.scala:1328)
[info]   at org.scalatest.FunSuite.fail(FunSuite.scala:1555)
[info]   at org.apache.spark.sql.QueryTest.checkAnswer(QueryTest.scala:77)
[info]   at org.apache.spark.sql.QueryTest.checkAnswer(QueryTest.scala:95)
[info]   at org.apache.spark.sql.SQLQuerySuite$$anonfun$23.apply$mcV$sp(SQLQuerySuite.scala:300)
[info]   at org.apache.spark.sql.SQLQuerySuite$$anonfun$23.apply(SQLQuerySuite.scala:300)
[info]   at org.apache.spark.sql.SQLQuerySuite$$anonfun$23.apply(SQLQuerySuite.scala:300)
[info]   at org.scalatest.Transformer$$anonfun$apply$1.apply$mcV$sp(Transformer.scala:22)
[info]   at org.scalatest.OutcomeOf$class.outcomeOf(OutcomeOf.scala:85)
[info]   at org.scalatest.OutcomeOf$.outcomeOf(OutcomeOf.scala:104)
[info]   at org.scalatest.Transformer.apply(Transformer.scala:22)
[info]   at org.scalatest.Transformer.apply(Transformer.scala:20)
[info]   at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:166)
[info]   at org.scalatest.Suite$class.withFixture(Suite.scala:1122)
[info]   at org.scalatest.FunSuite.withFixture(FunSuite.scala:1555)
[info]   at org.scalatest.FunSuiteLike$class.invokeWithFixture$1(FunSuiteLike.scala:163)
[info]   at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:175)
[info]   at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:175)
[info]   at org.scalatest.SuperEngine.runTestImpl(Engine.scala:306)
[info]   at org.scalatest.FunSuiteLike$class.runTest(FunSuiteLike.scala:175)
[info]   at org.scalatest.FunSuite.runTest(FunSuite.scala:1555)
[info]   at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:208)
[info]   at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:208)
[info]   at org.scalatest.SuperEngine$$anonfun$traverseSubNode

Author: wangfei <wangfei1@huawei.com>

Closes #4395 from scwf/SQLQuerySuite and squashes the following commits:

1431a2d [wangfei] fix conflicts
c35fe5e [wangfei] minor fix
01dab3a [wangfei] fix test failure of SQLQuerySuite
2015-02-05 12:44:12 -08:00
Reynold Xin 7d789e117d [SPARK-5612][SQL] Move DataFrame implicit functions into SQLContext.implicits.
Author: Reynold Xin <rxin@databricks.com>

Closes #4386 from rxin/df-implicits and squashes the following commits:

9d96606 [Reynold Xin] style fix
edd296b [Reynold Xin] ReplSuite
1c946ab [Reynold Xin] [SPARK-5612][SQL] Move DataFrame implicit functions into SQLContext.implicits.
2015-02-04 23:44:34 -08:00
Reynold Xin 206f9bc362 [SPARK-5538][SQL] Fix flaky CachedTableSuite
Author: Reynold Xin <rxin@databricks.com>

Closes #4379 from rxin/CachedTableSuite and squashes the following commits:

f2b44ce [Reynold Xin] [SQL] Fix flaky CachedTableSuite.
2015-02-04 19:52:41 -08:00
Sadhan Sood dba98bf698 [SPARK-4520] [SQL] This pr fixes the ArrayIndexOutOfBoundsException as r...
...aised in SPARK-4520.

The exception is thrown only for a thrift generated parquet file. The array element schema name is assumed as "array" as per ParquetAvro but for thrift generated parquet files, it is array_name + "_tuple". This leads to missing child of array group type and hence when the parquet rows are being materialized leads to the exception.

Author: Sadhan Sood <sadhan@tellapart.com>

Closes #4148 from sadhan/SPARK-4520 and squashes the following commits:

c5ccde8 [Sadhan Sood] [SPARK-4520] [SQL] This pr fixes the ArrayIndexOutOfBoundsException as raised in SPARK-4520.
2015-02-04 19:18:06 -08:00
kul 424cb699ee [SPARK-5426][SQL] Add SparkSQL Java API helper methods.
Right now the PR adds few helper methods for java apis. But the issue was opened mainly to get rid of transformations in java api like `.rdd` and `.toJavaRDD` while working with `SQLContext` or `HiveContext`.

Author: kul <kuldeep.bora@gmail.com>

Closes #4243 from kul/master and squashes the following commits:

2390fba [kul] [SPARK-5426][SQL] Add SparkSQL Java API helper methods.
2015-02-04 15:08:37 -08:00
Reynold Xin 40c4cb2fe7 [SPARK-5579][SQL][DataFrame] Support for project/filter using SQL expressions
```scala
df.selectExpr("abs(colA)", "colB")
df.filter("age > 21")
```

Author: Reynold Xin <rxin@databricks.com>

Closes #4348 from rxin/SPARK-5579 and squashes the following commits:

2baeef2 [Reynold Xin] Fix Python.
b416372 [Reynold Xin] [SPARK-5579][SQL][DataFrame] Support for project/filter using SQL expressions.
2015-02-03 22:15:35 -08:00
Reynold Xin 1077f2e1de [SPARK-5578][SQL][DataFrame] Provide a convenient way for Scala users to use UDFs
A more convenient way to define user-defined functions.

Author: Reynold Xin <rxin@databricks.com>

Closes #4345 from rxin/defineUDF and squashes the following commits:

639c0f8 [Reynold Xin] udf tests.
0a0b339 [Reynold Xin] defineUDF -> udf.
b452b8d [Reynold Xin] Fix UDF registration.
d2e42c3 [Reynold Xin] SQLContext.udf.register() returns a UserDefinedFunction also.
4333605 [Reynold Xin] [SQL][DataFrame] defineUDF.
2015-02-03 20:07:46 -08:00
Daoyuan Wang db821ed2ed [SPARK-4508] [SQL] build native date type to conform behavior to Hive
The previous #3732 is reverted due to some test failure.
Have fixed that.

Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #4325 from adrian-wang/datenative and squashes the following commits:

096e20d [Daoyuan Wang] fix for mixed timezone
0ed0fdc [Daoyuan Wang] fix test data
a2fdd4e [Daoyuan Wang] getDate
c37832b [Daoyuan Wang] row to catalyst
f0005b1 [Daoyuan Wang] add date in sql parser and java type conversion
024c9a6 [Daoyuan Wang] clean some import order
d6715fc [Daoyuan Wang] refactoring Date as Primitive Int internally
374abd5 [Daoyuan Wang] spark native date type support
2015-02-03 12:21:45 -08:00
Yin Huai 13531dd97c [SPARK-5501][SPARK-5420][SQL] Write support for the data source API
This PR aims to support `INSERT INTO/OVERWRITE TABLE tableName` and `CREATE TABLE tableName AS SELECT` for the data source API (partitioned tables are not supported).

In this PR, I am also adding the support of `IF NOT EXISTS` for our ddl parser. The current semantic of `IF NOT EXISTS` is explained as follows.
* For a `CREATE TEMPORARY TABLE` statement, it does not `IF NOT EXISTS` for now.
* For a `CREATE TABLE` statement (we are creating a metastore table), if there is an existing table having the same name ...
  * when `IF NOT EXISTS` clause is used, we will do nothing.
  * when `IF NOT EXISTS` clause is not used, the user will see an exception saying the table already exists.

TODOs:
- [x] CTAS support
- [x] Programmatic APIs
- [ ] Python API (another PR)
- [x] More unit tests
- [ ] Documents (another PR)

marmbrus liancheng rxin

Author: Yin Huai <yhuai@databricks.com>

Closes #4294 from yhuai/writeSupport and squashes the following commits:

3db1539 [Yin Huai] save does not take overwrite.
1c98881 [Yin Huai] Fix test.
142372a [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupport
34e1bfb [Yin Huai] Address comments.
1682ca6 [Yin Huai] Better support for CTAS statements.
e789d64 [Yin Huai] For the Scala API, let users to use tuples to provide options.
0128065 [Yin Huai] Short hand versions of save and load.
66ebd74 [Yin Huai] Formatting.
9203ec2 [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupport
e5d29f2 [Yin Huai] Programmatic APIs.
1a719a5 [Yin Huai] CREATE TEMPORARY TABLE with IF NOT EXISTS is not allowed for now.
909924f [Yin Huai] Add saveAsTable for the data source API to DataFrame.
95a7c71 [Yin Huai] Fix bug when handling IF NOT EXISTS clause in a CREATE TEMPORARY TABLE statement.
d37b19c [Yin Huai] Cheng's comments.
fd6758c [Yin Huai] Use BeforeAndAfterAll.
7880891 [Yin Huai] Support CREATE TABLE AS SELECT STATEMENT and the IF NOT EXISTS clause.
cb85b05 [Yin Huai] Initial write support.
2f91354 [Yin Huai] Make INSERT OVERWRITE/INTO statements consistent between HiveQL and SqlParser.
2015-02-02 23:30:44 -08:00
Tor Myklebust 8f471a66db [SPARK-5472][SQL] A JDBC data source for Spark SQL.
This pull request contains a Spark SQL data source that can pull data from, and can put data into, a JDBC database.

I have tested both read and write support with H2, MySQL, and Postgres.  It would surprise me if both read and write support worked flawlessly out-of-the-box for any other database; different databases have different names for different JDBC data types and different meanings for SQL types with the same name.  However, this code is designed (see `DriverQuirks.scala`) to make it *relatively* painless to add support for another database by augmenting the type mapping contained in this PR.

Author: Tor Myklebust <tmyklebu@gmail.com>

Closes #4261 from tmyklebu/master and squashes the following commits:

cf167ce [Tor Myklebust] Work around other Java tests ruining TestSQLContext.
67893bf [Tor Myklebust] Move the jdbcRDD methods into SQLContext itself.
585f95b [Tor Myklebust] Dependencies go into the project's pom.xml.
829d5ba [Tor Myklebust] Merge branch 'master' of https://github.com/apache/spark
41647ef [Tor Myklebust] Hide a couple things that don't need to be public.
7318aea [Tor Myklebust] Fix scalastyle warnings.
a09eeac [Tor Myklebust] JDBC data source for Spark SQL.
176bb98 [Tor Myklebust] Add test deps for JDBC support.
2015-02-02 19:50:14 -08:00
Reynold Xin 554403fd91 [SQL] Improve DataFrame API error reporting
1. Throw UnsupportedOperationException if a Column is not computable.
2. Perform eager analysis on DataFrame so we can catch errors when they happen (not when an action is run).

Author: Reynold Xin <rxin@databricks.com>
Author: Davies Liu <davies@databricks.com>

Closes #4296 from rxin/col-computability and squashes the following commits:

6527b86 [Reynold Xin] Merge pull request #8 from davies/col-computability
fd92bc7 [Reynold Xin] Merge branch 'master' into col-computability
f79034c [Davies Liu] fix python tests
5afe1ff [Reynold Xin] Fix scala test.
17f6bae [Reynold Xin] Various fixes.
b932e86 [Reynold Xin] Added eager analysis for error reporting.
e6f00b8 [Reynold Xin] [SQL][API] ComputableColumn vs IncomputableColumn
2015-02-02 19:01:47 -08:00
Patrick Wendell eccb9fbb2d Revert "[SPARK-4508] [SQL] build native date type to conform behavior to Hive"
This reverts commit 1646f89d96.
2015-02-02 17:52:17 -08:00
Daoyuan Wang 1646f89d96 [SPARK-4508] [SQL] build native date type to conform behavior to Hive
Store daysSinceEpoch as an Int value(4 bytes) to represent DateType, instead of using java.sql.Date(8 bytes as Long) in catalyst row. This ensures the same comparison behavior of Hive and Catalyst.
Subsumes #3381
I thinks there are already some tests in JavaSQLSuite, and for python it will not affect python's datetime class.

Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #3732 from adrian-wang/datenative and squashes the following commits:

0ed0fdc [Daoyuan Wang] fix test data
a2fdd4e [Daoyuan Wang] getDate
c37832b [Daoyuan Wang] row to catalyst
f0005b1 [Daoyuan Wang] add date in sql parser and java type conversion
024c9a6 [Daoyuan Wang] clean some import order
d6715fc [Daoyuan Wang] refactoring Date as Primitive Int internally
374abd5 [Daoyuan Wang] spark native date type support
2015-02-02 15:49:22 -08:00
Daoyuan Wang 8cf4a1f02e [SPARK-5262] [SPARK-5244] [SQL] add coalesce in SQLParser and widen types for parameters of coalesce
I'll add test case in #4040

Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #4057 from adrian-wang/coal and squashes the following commits:

4d0111a [Daoyuan Wang] address Yin's comments
c393e18 [Daoyuan Wang] fix rebase conflicts
e47c03a [Daoyuan Wang] add coalesce in parser
c74828d [Daoyuan Wang] cast types for coalesce
2015-02-01 18:51:38 -08:00
OopsOutOfMemory 1b56f1d6bb [SPARK-5196][SQL] Support comment in Create Table Field DDL
Support `comment` in create a table field.
__CREATE TEMPORARY TABLE people(name string `comment` "the name of a person")__

Author: OopsOutOfMemory <victorshengli@126.com>

Closes #3999 from OopsOutOfMemory/meta_comment and squashes the following commits:

39150d4 [OopsOutOfMemory] add comment and refine test suite
2015-02-01 18:41:58 -08:00
Reynold Xin 80def9deb3 [SQL] Support df("*") to select all columns in a data frame.
This PR makes Star a trait, and provides two implementations: UnresolvedStar (used for *, tblName.*) and ResolvedStar (used for df("*")).

Author: Reynold Xin <rxin@databricks.com>

Closes #4283 from rxin/df-star and squashes the following commits:

c9cba3e [Reynold Xin] Removed mapFunction in UnresolvedStar.
1a3a1d7 [Reynold Xin] [SQL] Support df("*") to select all columns in a data frame.
2015-01-29 19:09:08 -08:00
Josh Rosen 22271f9693 [SPARK-5462] [SQL] Use analyzed query plan in DataFrame.apply()
This patch changes DataFrame's `apply()` method to use an analyzed query plan when resolving column names.  This fixes a bug where `apply` would throw "invalid call to qualifiers on unresolved object" errors when called on DataFrames constructed via `SQLContext.sql()`.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #4282 from JoshRosen/SPARK-5462 and squashes the following commits:

b9e6da2 [Josh Rosen] [SPARK-5462] Use analyzed query plan in DataFrame.apply().
2015-01-29 18:23:05 -08:00
Reynold Xin ce9c43ba8c [SQL] DataFrame API improvements
1. Added Dsl.column in case Dsl.col is shadowed.
2. Allow using String to specify the target data type in cast.
3. Support sorting on multiple columns using column names.
4. Added Java API test file.

Author: Reynold Xin <rxin@databricks.com>

Closes #4280 from rxin/dsl1 and squashes the following commits:

33ecb7a [Reynold Xin] Add the Java test.
d06540a [Reynold Xin] [SQL] DataFrame API improvements.
2015-01-29 17:24:00 -08:00
wangfei c1b3eebf97 [SPARK-5373][SQL] Literal in agg grouping expressions leads to incorrect result
`select key, count( * ) from src group by key, 1`  will get the wrong answer.

e.g. for this table
```
  val testData2 =
    TestSQLContext.sparkContext.parallelize(
      TestData2(1, 1) ::
      TestData2(1, 2) ::
      TestData2(2, 1) ::
      TestData2(2, 2) ::
      TestData2(3, 1) ::
      TestData2(3, 2) :: Nil, 2).toSchemaRDD
  testData2.registerTempTable("testData2")
```
result of `SELECT a, count(1) FROM testData2 GROUP BY a, 1`  is

```
                     [1,1]
                     [2,2]
                     [3,1]
```

Author: wangfei <wangfei1@huawei.com>

Closes #4169 from scwf/agg-bug and squashes the following commits:

05751db [wangfei] fix bugs when literal in agg grouping expressioons
2015-01-29 15:47:18 -08:00
Yash Datta de221ea032 [SPARK-4786][SQL]: Parquet filter pushdown for castable types
Enable parquet filter pushdown of castable types like short, byte that can be cast to integer

Author: Yash Datta <Yash.Datta@guavus.com>

Closes #4156 from saucam/filter_short and squashes the following commits:

a403979 [Yash Datta] SPARK-4786: Fix styling issues
d029866 [Yash Datta] SPARK-4786: Add test case
cb2e0d9 [Yash Datta] SPARK-4786: Parquet filter pushdown for castable types
2015-01-29 15:42:23 -08:00
Michael Davies 940f375611 [SPARK-5309][SQL] Add support for dictionaries in PrimitiveConverter for Strin...
...gs.

Parquet Converters allow developers to take advantage of dictionary encoding of column data to reduce Column Binary decoding.

The Spark PrimitiveConverter was not using that API and consequently for String columns that used dictionary compression repeated Binary to String conversions for the same String.

In measurements this could account for over 25% of entire query time.
For example a 500M row table split across 16 blocks was aggregated and summed in a litte under 30s before this change and a little under 20s after the change.

Author: Michael Davies <Michael.BellDavies@gmail.com>

Closes #4187 from MickDavies/SPARK-5309-2 and squashes the following commits:

327287e [Michael Davies] SPARK-5309: Add support for dictionaries in PrimitiveConverter for Strings.
33c002c [Michael Davies] SPARK-5309: Add support for dictionaries in PrimitiveConverter for Strings.
2015-01-29 15:40:59 -08:00
Reynold Xin 715632232d [SPARK-5445][SQL] Consolidate Java and Scala DSL static methods.
Turns out Scala does generate static methods for ones defined in a companion object. Finally no need to separate api.java.dsl and api.scala.dsl.

Author: Reynold Xin <rxin@databricks.com>

Closes #4276 from rxin/dsl and squashes the following commits:

30aa611 [Reynold Xin] Add all files.
1a9d215 [Reynold Xin] [SPARK-5445][SQL] Consolidate Java and Scala DSL static methods.
2015-01-29 15:13:09 -08:00
Reynold Xin 5b9760de8d [SPARK-5445][SQL] Made DataFrame dsl usable in Java
Also removed the literal implicit transformation since it is pretty scary for API design. Instead, created a new lit method for creating literals. This doesn't break anything from a compatibility perspective because Literal was added two days ago.

Author: Reynold Xin <rxin@databricks.com>

Closes #4241 from rxin/df-docupdate and squashes the following commits:

c0f4810 [Reynold Xin] Fix Python merge conflict.
094c7d7 [Reynold Xin] Minor style fix. Reset Python tests.
3c89f4a [Reynold Xin] Package.
dfe6962 [Reynold Xin] Updated Python aggregate.
5dd4265 [Reynold Xin] Made dsl Java callable.
14b3c27 [Reynold Xin] Fix literal expression for symbols.
68b31cb [Reynold Xin] Literal.
4cfeb78 [Reynold Xin] [SPARK-5097][SQL] Address DataFrame code review feedback.
2015-01-28 19:10:32 -08:00
Reynold Xin c8e934ef3c [SPARK-5447][SQL] Replaced reference to SchemaRDD with DataFrame.
and

[SPARK-5448][SQL] Make CacheManager a concrete class and field in SQLContext

Author: Reynold Xin <rxin@databricks.com>

Closes #4242 from rxin/sqlCleanup and squashes the following commits:

e351cb2 [Reynold Xin] Fixed toDataFrame.
6545c42 [Reynold Xin] More changes.
728c017 [Reynold Xin] [SPARK-5447][SQL] Replaced reference to SchemaRDD with DataFrame.
2015-01-28 12:10:01 -08:00
Reynold Xin d74373225e [SPARK-5097][SQL] Test cases for DataFrame expressions.
Author: Reynold Xin <rxin@databricks.com>

Closes #4235 from rxin/df-tests1 and squashes the following commits:

f341db6 [Reynold Xin] [SPARK-5097][SQL] Test cases for DataFrame expressions.
2015-01-27 18:10:49 -08:00
Reynold Xin 119f45d61d [SPARK-5097][SQL] DataFrame
This pull request redesigns the existing Spark SQL dsl, which already provides data frame like functionalities.

TODOs:
With the exception of Python support, other tasks can be done in separate, follow-up PRs.
- [ ] Audit of the API
- [ ] Documentation
- [ ] More test cases to cover the new API
- [x] Python support
- [ ] Type alias SchemaRDD

Author: Reynold Xin <rxin@databricks.com>
Author: Davies Liu <davies@databricks.com>

Closes #4173 from rxin/df1 and squashes the following commits:

0a1a73b [Reynold Xin] Merge branch 'df1' of github.com:rxin/spark into df1
23b4427 [Reynold Xin] Mima.
828f70d [Reynold Xin] Merge pull request #7 from davies/df
257b9e6 [Davies Liu] add repartition
6bf2b73 [Davies Liu] fix collect with UDT and tests
e971078 [Reynold Xin] Missing quotes.
b9306b4 [Reynold Xin] Remove removeColumn/updateColumn for now.
a728bf2 [Reynold Xin] Example rename.
e8aa3d3 [Reynold Xin] groupby -> groupBy.
9662c9e [Davies Liu] improve DataFrame Python API
4ae51ea [Davies Liu] python API for dataframe
1e5e454 [Reynold Xin] Fixed a bug with symbol conversion.
2ca74db [Reynold Xin] Couple minor fixes.
ea98ea1 [Reynold Xin] Documentation & literal expressions.
2b22684 [Reynold Xin] Got rid of IntelliJ problems.
02bbfbc [Reynold Xin] Tightening imports.
ffbce66 [Reynold Xin] Fixed compilation error.
59b6d8b [Reynold Xin] Style violation.
b85edfb [Reynold Xin] ALS.
8c37f0a [Reynold Xin] Made MLlib and examples compile
6d53134 [Reynold Xin] Hive module.
d35efd5 [Reynold Xin] Fixed compilation error.
ce4a5d2 [Reynold Xin] Fixed test cases in SQL except ParquetIOSuite.
66d5ef1 [Reynold Xin] SQLContext minor patch.
c9bcdc0 [Reynold Xin] Checkpoint: SQL module compiles!
2015-01-27 16:08:24 -08:00
Cheng Lian ba19689fe7 [SQL] [Minor] Remove deprecated parquet tests
This PR removes the deprecated `ParquetQuerySuite`, renamed `ParquetQuerySuite2` to `ParquetQuerySuite`, and refactored changes introduced in #4115 to `ParquetFilterSuite` . It is a follow-up of #3644.

Notice that test cases in the old `ParquetQuerySuite` have already been well covered by other test suites introduced in #3644.

<!-- Reviewable:start -->
[<img src="https://reviewable.io/review_button.png" height=40 alt="Review on Reviewable"/>](https://reviewable.io/reviews/apache/spark/4116)
<!-- Reviewable:end -->

Author: Cheng Lian <lian@databricks.com>

Closes #4116 from liancheng/remove-deprecated-parquet-tests and squashes the following commits:

f73b8f9 [Cheng Lian] Removes deprecated Parquet test suite
2015-01-21 14:38:10 -08:00
Josh Rosen b328ac6c8c Revert "[SPARK-5244] [SQL] add coalesce() in sql parser"
This reverts commit 812d3679f5.
2015-01-21 14:27:43 -08:00
Daoyuan Wang 812d3679f5 [SPARK-5244] [SQL] add coalesce() in sql parser
Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #4040 from adrian-wang/coalesce and squashes the following commits:

0ac8e8f [Daoyuan Wang] add coalesce() in sql parser
2015-01-21 12:59:41 -08:00
Reynold Xin d181c2a1fc [SPARK-5323][SQL] Remove Row's Seq inheritance.
Author: Reynold Xin <rxin@databricks.com>

Closes #4115 from rxin/row-seq and squashes the following commits:

e33abd8 [Reynold Xin] Fixed compilation error.
cceb650 [Reynold Xin] Python test fixes, and removal of WrapDynamic.
0334a52 [Reynold Xin] mkString.
9cdeb7d [Reynold Xin] Hive tests.
15681c2 [Reynold Xin] Fix more test cases.
ea9023a [Reynold Xin] Fixed a catalyst test.
c5e2cb5 [Reynold Xin] Minor patch up.
b9cab7c [Reynold Xin] [SPARK-5323][SQL] Remove Row's Seq inheritance.
2015-01-20 15:16:14 -08:00
Yin Huai bc20a52b34 [SPARK-5287][SQL] Add defaultSizeOf to every data type.
JIRA: https://issues.apache.org/jira/browse/SPARK-5287

This PR only add `defaultSizeOf` to data types and make those internal type classes `protected[sql]`. I will use another PR to cleanup the type hierarchy of data types.

Author: Yin Huai <yhuai@databricks.com>

Closes #4081 from yhuai/SPARK-5287 and squashes the following commits:

90cec75 [Yin Huai] Update unit test.
e1c600c [Yin Huai] Make internal classes protected[sql].
7eaba68 [Yin Huai] Add `defaultSize` method to data types.
fd425e0 [Yin Huai] Add all native types to NativeType.defaultSizeOf.
2015-01-20 13:26:36 -08:00
Reynold Xin 1727e0841c [SPARK-5279][SQL] Use java.math.BigDecimal as the exposed Decimal type.
Author: Reynold Xin <rxin@databricks.com>

Closes #4092 from rxin/bigdecimal and squashes the following commits:

27b08c9 [Reynold Xin] Fixed test.
10cb496 [Reynold Xin] [SPARK-5279][SQL] Use java.math.BigDecimal as the exposed Decimal type.
2015-01-18 11:01:42 -08:00
Reynold Xin 61b427d4b1 [SPARK-5193][SQL] Remove Spark SQL Java-specific API.
After the following patches, the main (Scala) API is now usable for Java users directly.

https://github.com/apache/spark/pull/4056
https://github.com/apache/spark/pull/4054
https://github.com/apache/spark/pull/4049
https://github.com/apache/spark/pull/4030
https://github.com/apache/spark/pull/3965
https://github.com/apache/spark/pull/3958

Author: Reynold Xin <rxin@databricks.com>

Closes #4065 from rxin/sql-java-api and squashes the following commits:

b1fd860 [Reynold Xin] Fix Mima
6d86578 [Reynold Xin] Ok one more attempt in fixing Python...
e8f1455 [Reynold Xin] Fix Python again...
3e53f91 [Reynold Xin] Fixed Python.
83735da [Reynold Xin] Fix BigDecimal test.
e9f1de3 [Reynold Xin] Use scala BigDecimal.
500d2c4 [Reynold Xin] Fix Decimal.
ba3bfa2 [Reynold Xin] Updated javadoc for RowFactory.
c4ae1c5 [Reynold Xin] [SPARK-5193][SQL] Remove Spark SQL Java-specific API.
2015-01-16 21:09:06 -08:00
Reynold Xin 1881431dd5 [SPARK-5274][SQL] Reconcile Java and Scala UDFRegistration.
As part of SPARK-5193:

1. Removed UDFRegistration as a mixin in SQLContext and made it a field ("udf").
2. For Java UDFs, renamed dataType to returnType.
3. For Scala UDFs, added type tags.
4. Added all Java UDF registration methods to Scala's UDFRegistration.
5. Documentation

Author: Reynold Xin <rxin@databricks.com>

Closes #4056 from rxin/udf-registration and squashes the following commits:

ae9c556 [Reynold Xin] Updated example.
675a3c9 [Reynold Xin] Style fix
47c24ff [Reynold Xin] Python fix.
5f00c45 [Reynold Xin] Restore data type position in java udf and added typetags.
032f006 [Reynold Xin] [SPARK-5193][SQL] Reconcile Java and Scala UDFRegistration.
2015-01-15 16:15:12 -08:00
Reynold Xin cfa397c126 [SPARK-5193][SQL] Tighten up SQLContext API
1. Removed 2 implicits (logicalPlanToSparkQuery and baseRelationToSchemaRDD)
2. Moved extraStrategies into ExperimentalMethods.
3. Made private methods protected[sql] so they don't show up in javadocs.
4. Removed createParquetFile.
5. Added Java version of applySchema to SQLContext.

Author: Reynold Xin <rxin@databricks.com>

Closes #4049 from rxin/sqlContext-refactor and squashes the following commits:

a326a1a [Reynold Xin] Remove createParquetFile and add applySchema for Java to SQLContext.
ecd6685 [Reynold Xin] Added baseRelationToSchemaRDD back.
4a38c9b [Reynold Xin] [SPARK-5193][SQL] Tighten up SQLContext API
2015-01-14 18:36:15 -08:00
Daoyuan Wang a3f7421b42 [SPARK-5248] [SQL] move sql.types.decimal.Decimal to sql.types.Decimal
rxin follow up of #3732

Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #4041 from adrian-wang/decimal and squashes the following commits:

aa3d738 [Daoyuan Wang] fix auto refactor
7777a58 [Daoyuan Wang] move sql.types.decimal.Decimal to sql.types.Decimal
2015-01-14 09:36:59 -08:00
Reynold Xin f9969098c8 [SPARK-5123][SQL] Reconcile Java/Scala API for data types.
Having two versions of the data type APIs (one for Java, one for Scala) requires downstream libraries to also have two versions of the APIs if the library wants to support both Java and Scala. I took a look at the Scala version of the data type APIs - it can actually work out pretty well for Java out of the box.

As part of the PR, I created a sql.types package and moved all type definitions there. I then removed the Java specific data type API along with a lot of the conversion code.

This subsumes https://github.com/apache/spark/pull/3925

Author: Reynold Xin <rxin@databricks.com>

Closes #3958 from rxin/SPARK-5123-datatype-2 and squashes the following commits:

66505cc [Reynold Xin] [SPARK-5123] Expose only one version of the data type APIs (i.e. remove the Java-specific API).
2015-01-13 17:16:41 -08:00
Reynold Xin 14e3f114ef [SPARK-5168] Make SQLConf a field rather than mixin in SQLContext
This change should be binary and source backward compatible since we didn't change any user facing APIs.

Author: Reynold Xin <rxin@databricks.com>

Closes #3965 from rxin/SPARK-5168-sqlconf and squashes the following commits:

42eec09 [Reynold Xin] Fix default conf value.
0ef86cc [Reynold Xin] Fix constructor ordering.
4d7f910 [Reynold Xin] Properly override config.
ccc8e6a [Reynold Xin] [SPARK-5168] Make SQLConf a field rather than mixin in SQLContext
2015-01-13 13:30:35 -08:00
Yin Huai 6463e0b9e8 [SPARK-4912][SQL] Persistent tables for the Spark SQL data sources api
With changes in this PR, users can persist metadata of tables created based on the data source API in metastore through DDLs.

Author: Yin Huai <yhuai@databricks.com>
Author: Michael Armbrust <michael@databricks.com>

Closes #3960 from yhuai/persistantTablesWithSchema2 and squashes the following commits:

069c235 [Yin Huai] Make exception messages user friendly.
c07cbc6 [Yin Huai] Get the location of test file in a correct way.
4456e98 [Yin Huai] Test data.
5315dfc [Yin Huai] rxin's comments.
7fc4b56 [Yin Huai] Add DDLStrategy and HiveDDLStrategy to plan DDLs based on the data source API.
aeaf4b3 [Yin Huai] Add comments.
06f9b0c [Yin Huai] Revert unnecessary changes.
feb88aa [Yin Huai] Merge remote-tracking branch 'apache/master' into persistantTablesWithSchema2
172db80 [Yin Huai] Fix unit test.
49bf1ac [Yin Huai] Unit tests.
8f8f1a1 [Yin Huai] [SPARK-4574][SQL] Adding support for defining schema in foreign DDL commands. #3431
f47fda1 [Yin Huai] Unit tests.
2b59723 [Michael Armbrust] Set external when creating tables
c00bb1b [Michael Armbrust] Don't use reflection to read options
1ea6e7b [Michael Armbrust] Don't fail when trying to uncache a table that doesn't exist
6edc710 [Michael Armbrust] Add tests.
d7da491 [Michael Armbrust] First draft of persistent tables.
2015-01-13 13:01:27 -08:00
scwf d22a31f5e8 [SPARK-5029][SQL] Enable from follow multiple brackets
Enable from follow multiple brackets:
```
select key from ((select * from testData limit 1) union all (select * from testData limit 1)) x limit 1
```

Author: scwf <wangfei1@huawei.com>

Closes #3853 from scwf/from and squashes the following commits:

14f110a [scwf] enable from follow multiple brackets
2015-01-10 17:07:34 -08:00
scwf 693a323a70 [SPARK-4574][SQL] Adding support for defining schema in foreign DDL commands.
Adding support for defining schema in foreign DDL commands. Now foreign DDL support commands like:
```
CREATE TEMPORARY TABLE avroTable
USING org.apache.spark.sql.avro
OPTIONS (path "../hive/src/test/resources/data/files/episodes.avro")
```
With this PR user can define schema instead of infer from file, so  support ddl command as follows:
```
CREATE TEMPORARY TABLE avroTable(a int, b string)
USING org.apache.spark.sql.avro
OPTIONS (path "../hive/src/test/resources/data/files/episodes.avro")
```

Author: scwf <wangfei1@huawei.com>
Author: Yin Huai <yhuai@databricks.com>
Author: Fei Wang <wangfei1@huawei.com>
Author: wangfei <wangfei1@huawei.com>

Closes #3431 from scwf/ddl and squashes the following commits:

7e79ce5 [Fei Wang] Merge pull request #22 from yhuai/pr3431yin
38f634e [Yin Huai] Remove Option from createRelation.
65e9c73 [Yin Huai] Revert all changes since applying a given schema has not been testd.
a852b10 [scwf] remove cleanIdentifier
f336a16 [Fei Wang] Merge pull request #21 from yhuai/pr3431yin
baf79b5 [Yin Huai] Test special characters quoted by backticks.
50a03b0 [Yin Huai] Use JsonRDD.nullTypeToStringType to convert NullType to StringType.
1eeb769 [Fei Wang] Merge pull request #20 from yhuai/pr3431yin
f5c22b0 [Yin Huai] Refactor code and update test cases.
f1cffe4 [Yin Huai] Revert "minor refactory"
b621c8f [scwf] minor refactory
d02547f [scwf] fix HiveCompatibilitySuite test failure
8dfbf7a [scwf] more tests for complex data type
ddab984 [Fei Wang] Merge pull request #19 from yhuai/pr3431yin
91ad91b [Yin Huai] Parse data types in DDLParser.
cf982d2 [scwf] fixed test failure
445b57b [scwf] address comments
02a662c [scwf] style issue
44eb70c [scwf] fix decimal parser issue
83b6fc3 [scwf] minor fix
9bf12f8 [wangfei] adding test case
7787ec7 [wangfei] added SchemaRelationProvider
0ba70df [wangfei] draft version
2015-01-10 13:53:21 -08:00
Alex Liu 4b39fd1e63 [SPARK-4943][SQL] Allow table name having dot for db/catalog
The pull only fixes the parsing error and changes API to use tableIdentifier. Joining different catalog datasource related change is not done in this pull.

Author: Alex Liu <alex_liu68@yahoo.com>

Closes #3941 from alexliu68/SPARK-SQL-4943-3 and squashes the following commits:

343ae27 [Alex Liu] [SPARK-4943][SQL] refactoring according to review
29e5e55 [Alex Liu] [SPARK-4943][SQL] fix failed Hive CTAS tests
6ae77ce [Alex Liu] [SPARK-4943][SQL] fix TestHive matching error
3652997 [Alex Liu] [SPARK-4943][SQL] Allow table name having dot to support db/catalog ...
2015-01-10 13:23:09 -08:00
Reynold Xin 04d55d8e8e [SPARK-5040][SQL] Support expressing unresolved attributes using $"attribute name" notation in SQL DSL.
Author: Reynold Xin <rxin@databricks.com>

Closes #3862 from rxin/stringcontext-attr and squashes the following commits:

9b10f57 [Reynold Xin] Rename StrongToAttributeConversionHelper
72121af [Reynold Xin] [SPARK-5040][SQL] Support expressing unresolved attributes using $"attribute name" notation in SQL DSL.
2015-01-05 15:34:22 -08:00
wangxiaojing 07fa1910d9 [SPARK-4570][SQL]add BroadcastLeftSemiJoinHash
JIRA issue: [SPARK-4570](https://issues.apache.org/jira/browse/SPARK-4570)
We are planning to create a `BroadcastLeftSemiJoinHash` to implement the broadcast join for `left semijoin`
In left semijoin :
If the size of data from right side is smaller than the user-settable threshold `AUTO_BROADCASTJOIN_THRESHOLD`,
the planner would mark it as the `broadcast` relation and mark the other relation as the stream side. The broadcast table will be broadcasted to all of the executors involved in the join, as a `org.apache.spark.broadcast.Broadcast` object. It will use `joins.BroadcastLeftSemiJoinHash`.,else it will use `joins.LeftSemiJoinHash`.

The benchmark suggests these  made the optimized version 4x faster  when `left semijoin`
<pre><code>
Original:
left semi join : 9288 ms
Optimized:
left semi join : 1963 ms
</code></pre>
The micro benchmark load `data1/kv3.txt` into a normal Hive table.
Benchmark code:
<pre><code>
 def benchmark(f: => Unit) = {
    val begin = System.currentTimeMillis()
    f
    val end = System.currentTimeMillis()
    end - begin
  }
  val sc = new SparkContext(
    new SparkConf()
      .setMaster("local")
      .setAppName(getClass.getSimpleName.stripSuffix("$")))
  val hiveContext = new HiveContext(sc)
  import hiveContext._
  sql("drop table if exists left_table")
  sql("drop table if exists right_table")
  sql( """create table left_table (key int, value string)
       """.stripMargin)
  sql( s"""load data local inpath "/data1/kv3.txt" into table left_table""")
  sql( """create table right_table (key int, value string)
       """.stripMargin)
  sql(
    """
      |from left_table
      |insert overwrite table right_table
      |select left_table.key, left_table.value
    """.stripMargin)

  val leftSimeJoin = sql(
    """select a.key from left_table a
      |left semi join right_table b on a.key = b.key""".stripMargin)
  val leftSemiJoinDuration = benchmark(leftSimeJoin.count())
  println(s"left semi join : $leftSemiJoinDuration ms ")
</code></pre>

Author: wangxiaojing <u9jing@gmail.com>

Closes #3442 from wangxiaojing/SPARK-4570 and squashes the following commits:

a4a43c9 [wangxiaojing] rebase
f103983 [wangxiaojing] change style
fbe4887 [wangxiaojing] change style
ff2e618 [wangxiaojing] add testsuite
1a8da2a [wangxiaojing] add BroadcastLeftSemiJoinHash
2014-12-30 13:54:12 -08:00
Cheng Lian 61a99f6a11 [SPARK-4937][SQL] Normalizes conjunctions and disjunctions to eliminate common predicates
This PR is a simplified version of several filter optimization rules introduced in #3778 authored by scwf. Newly introduced optimizations include:

1. `a && a` => `a`
2. `a || a` => `a`
3. `(a || b || c || ...) && (a || b || d || ...)` => `a && b && (c || d || ...)`

The 3rd rule is particularly useful for optimizing the following query, which is planned into a cartesian product

```sql
SELECT *
  FROM t1, t2
 WHERE (t1.key = t2.key AND t1.value > 10)
    OR (t1.key = t2.key AND t2.value < 20)
```

to the following one, which is planned into an equi-join:

```sql
SELECT *
  FROM t1, t2
 WHERE t1.key = t2.key
   AND (t1.value > 10 OR t2.value < 20)
```

The example above is quite artificial, but common predicates are likely to appear in real life complex queries (like the one mentioned in #3778).

A difference between this PR and #3778 is that these optimizations are not limited to `Filter`, but are generalized to all logical plan nodes. Thanks to scwf for bringing up these optimizations, and chenghao-intel for the generalization suggestion.

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Author: Cheng Lian <lian@databricks.com>

Closes #3784 from liancheng/normalize-filters and squashes the following commits:

caca560 [Cheng Lian] Moves filter normalization into BooleanSimplification rule
4ab3a58 [Cheng Lian] Fixes test failure, adds more tests
5d54349 [Cheng Lian] Fixes typo in comment
2abbf8e [Cheng Lian] Forgot our sacred Apache licence header...
cf95639 [Cheng Lian] Adds an optimization rule for filter normalization
2014-12-30 13:38:27 -08:00
Cheng Lian 19a8802e70 [SPARK-4493][SQL] Tests for IsNull / IsNotNull in the ParquetFilterSuite
This is a follow-up of #3367 and #3644.

At the time #3644 was written, #3367 hadn't been merged yet, thus `IsNull` and `IsNotNull` filters are not covered in the first version of `ParquetFilterSuite`. This PR adds corresponding test cases.

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Author: Cheng Lian <lian@databricks.com>

Closes #3748 from liancheng/test-null-filters and squashes the following commits:

1ab943f [Cheng Lian] IsNull and IsNotNull Parquet filter test case for boolean type
bcd616b [Cheng Lian] Adds Parquet filter pushedown tests for IsNull and IsNotNull
2014-12-30 12:16:45 -08:00
Cheng Hao 53f0a00b60 [Spark-4512] [SQL] Unresolved Attribute Exception in Sort By
It will cause exception while do query like:
SELECT key+key FROM src sort by value;

Author: Cheng Hao <hao.cheng@intel.com>

Closes #3386 from chenghao-intel/sort and squashes the following commits:

38c78cc [Cheng Hao] revert the SortPartition in SparkStrategies
7e9dd15 [Cheng Hao] update the typo
fcd1d64 [Cheng Hao] rebase the latest master and update the SortBy unit test
2014-12-30 12:11:44 -08:00
wangfei daac221302 [SPARK-5002][SQL] Using ascending by default when not specify order in order by
spark sql does not support ```SELECT a, b FROM testData2 ORDER BY a desc, b```.

Author: wangfei <wangfei1@huawei.com>

Closes #3838 from scwf/orderby and squashes the following commits:

114b64a [wangfei] remove nouse methods
48145d3 [wangfei] fix order, using asc by default
2014-12-30 12:07:24 -08:00
Sean Owen 29fabb1b52 SPARK-4297 [BUILD] Build warning fixes omnibus
There are a number of warnings generated in a normal, successful build right now. They're mostly Java unchecked cast warnings, which can be suppressed. But there's a grab bag of other Scala language warnings and so on that can all be easily fixed. The forthcoming PR fixes about 90% of the build warnings I see now.

Author: Sean Owen <sowen@cloudera.com>

Closes #3157 from srowen/SPARK-4297 and squashes the following commits:

8c9e469 [Sean Owen] Suppress unchecked cast warnings, and several other build warning fixes
2014-12-24 13:32:51 -08:00
Thu Kyaw b68bc6d264 [SPARK-3928][SQL] Support wildcard matches on Parquet files.
...arquetFile accept hadoop glob pattern in path.

Author: Thu Kyaw <trk007@gmail.com>

Closes #3407 from tkyaw/master and squashes the following commits:

19115ad [Thu Kyaw] Merge https://github.com/apache/spark
ceded32 [Thu Kyaw] [SPARK-3928][SQL] Support wildcard matches on Parquet files.
d322c28 [Thu Kyaw] [SPARK-3928][SQL] Support wildcard matches on Parquet files.
ce677c6 [Thu Kyaw] [SPARK-3928][SQL] Support wildcard matches on Parquet files.
2014-12-18 20:08:32 -08:00
Cheng Hao 8d0d2a65eb [SPARK-4856] [SQL] NullType instead of StringType when sampling against empty string or nul...
```
TestSQLContext.sparkContext.parallelize(
  """{"ip":"27.31.100.29","headers":{"Host":"1.abc.com","Charset":"UTF-8"}}""" ::
  """{"ip":"27.31.100.29","headers":{}}""" ::
  """{"ip":"27.31.100.29","headers":""}""" :: Nil)
```
As empty string (the "headers") will be considered as String in the beginning (in line 2 and 3), it ignores the real nested data type (struct type "headers" in line 1), and also take the line 1 (the "headers") as String Type, which is not our expected.

Author: Cheng Hao <hao.cheng@intel.com>

Closes #3708 from chenghao-intel/json and squashes the following commits:

e7a72e9 [Cheng Hao] add more concise unit test
853de51 [Cheng Hao] NullType instead of StringType when sampling against empty string or null value
2014-12-17 15:01:59 -08:00
Michael Armbrust 19c0faad6d [HOTFIX][SQL] Fix parquet filter suite
Author: Michael Armbrust <michael@databricks.com>

Closes #3727 from marmbrus/parquetNotEq and squashes the following commits:

2157bfc [Michael Armbrust] Fix parquet filter suite
2014-12-17 14:27:02 -08:00
Cheng Lian 6277135376 [SPARK-4493][SQL] Don't pushdown Eq, NotEq, Lt, LtEq, Gt and GtEq predicates with nulls for Parquet
Predicates like `a = NULL` and `a < NULL` can't be pushed down since Parquet `Lt`, `LtEq`, `Gt`, `GtEq` doesn't accept null value. Note that `Eq` and `NotEq` can only be used with `null` to represent predicates like `a IS NULL` and `a IS NOT NULL`.

However, normally this issue doesn't cause NPE because any value compared to `NULL` results `NULL`, and Spark SQL automatically optimizes out `NULL` predicate in the `SimplifyFilters` rule. Only testing code that intentionally disables the optimizer may trigger this issue. (That's why this issue is not marked as blocker and I do **NOT** think we need to backport this to branch-1.1

This PR restricts `Lt`, `LtEq`, `Gt` and `GtEq` to non-null values only, and only uses `Eq` with null value to pushdown `IsNull` and `IsNotNull`. Also, added support for Parquet `NotEq` filter for completeness and (tiny) performance gain, it's also used to pushdown `IsNotNull`.

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Author: Cheng Lian <lian@databricks.com>

Closes #3367 from liancheng/filters-with-null and squashes the following commits:

cc41281 [Cheng Lian] Fixes several styling issues
de7de28 [Cheng Lian] Adds stricter rules for Parquet filters with null
2014-12-17 12:48:04 -08:00
Cheng Hao 5fdcbdc0c9 [SPARK-4625] [SQL] Add sort by for DSL & SimpleSqlParser
Add `sort by` support for both DSL & SqlParser.

This PR is relevant with #3386, either one merged, will cause the other rebased.

Author: Cheng Hao <hao.cheng@intel.com>

Closes #3481 from chenghao-intel/sortby and squashes the following commits:

041004f [Cheng Hao] Add sort by for DSL & SimpleSqlParser
2014-12-17 12:01:57 -08:00
scwf 60698801eb [SPARK-4618][SQL] Make foreign DDL commands options case-insensitive
Using lowercase for ```options``` key to make it case-insensitive, then we should use lower case to get value from parameters.
So flowing cmd work
```
      create temporary table normal_parquet
      USING org.apache.spark.sql.parquet
      OPTIONS (
        PATH '/xxx/data'
      )
```

Author: scwf <wangfei1@huawei.com>
Author: wangfei <wangfei1@huawei.com>

Closes #3470 from scwf/ddl-ulcase and squashes the following commits:

ae78509 [scwf] address comments
8f4f585 [wangfei] address comments
3c132ef [scwf] minor fix
a0fc20b [scwf] Merge branch 'master' of https://github.com/apache/spark into ddl-ulcase
4f86401 [scwf] adding CaseInsensitiveMap
e244e8d [wangfei] using lower case in json
e0cb017 [wangfei] make options in-casesensitive
2014-12-16 21:26:36 -08:00
Cheng Hao 770d8153a5 [SPARK-4375] [SQL] Add 0 argument support for udf
Author: Cheng Hao <hao.cheng@intel.com>

Closes #3595 from chenghao-intel/udf0 and squashes the following commits:

a858973 [Cheng Hao] Add 0 arguments support for udf
2014-12-16 21:21:11 -08:00
Cheng Lian 3b395e1051 [SPARK-4798][SQL] A new set of Parquet testing API and test suites
This PR provides a set Parquet testing API (see trait `ParquetTest`) that enables developers to write more concise test cases. A new set of Parquet test suites built upon this API  are added and aim to replace the old `ParquetQuerySuite`. To avoid potential merge conflicts, old testing code are not removed yet. The following classes can be safely removed after most Parquet related PRs are handled:

- `ParquetQuerySuite`
- `ParquetTestData`

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Author: Cheng Lian <lian@databricks.com>

Closes #3644 from liancheng/parquet-tests and squashes the following commits:

800e745 [Cheng Lian] Enforces ordering of test output
3bb8731 [Cheng Lian] Refactors HiveParquetSuite
aa2cb2e [Cheng Lian] Decouples ParquetTest and TestSQLContext
7b43a68 [Cheng Lian] Updates ParquetTest Scaladoc
7f07af0 [Cheng Lian] Adds a new set of Parquet test suites
2014-12-16 21:16:03 -08:00
wangxiaojing ea1315e3e2 [SPARK-4527][SQl]Add BroadcastNestedLoopJoin operator selection testsuite
In `JoinSuite` add BroadcastNestedLoopJoin operator selection testsuite

Author: wangxiaojing <u9jing@gmail.com>

Closes #3395 from wangxiaojing/SPARK-4527 and squashes the following commits:

ea0e495 [wangxiaojing] change style
53c3952 [wangxiaojing] Add BroadcastNestedLoopJoin operator selection testsuite
2014-12-16 14:45:56 -08:00
Cheng Hao bf40cf89e3 [SPARK-4713] [SQL] SchemaRDD.unpersist() should not raise exception if it is not persisted
Unpersist a uncached RDD, will not raise exception, for example:
```
val data = Array(1, 2, 3, 4, 5)
val distData = sc.parallelize(data)
distData.unpersist(true)
```

But the `SchemaRDD` will raise exception if the `SchemaRDD` is not cached. Since `SchemaRDD` is the subclasses of the `RDD`, we should follow the same behavior.

Author: Cheng Hao <hao.cheng@intel.com>

Closes #3572 from chenghao-intel/try_uncache and squashes the following commits:

50a7a89 [Cheng Hao] SchemaRDD.unpersist() should not raise exception if it is not persisted
2014-12-11 22:41:36 -08:00
Jacky Li ed88db4cb2 [SQL] remove unnecessary import
Author: Jacky Li <jacky.likun@huawei.com>

Closes #3585 from jackylk/remove and squashes the following commits:

045423d [Jacky Li] remove unnecessary import
2014-12-04 00:43:55 -08:00
YanTangZhai 1066427600 [SPARK-4676][SQL] JavaSchemaRDD.schema may throw NullType MatchError if sql has null
val jsc = new org.apache.spark.api.java.JavaSparkContext(sc)
val jhc = new org.apache.spark.sql.hive.api.java.JavaHiveContext(jsc)
val nrdd = jhc.hql("select null from spark_test.for_test")
println(nrdd.schema)
Then the error is thrown as follows:
scala.MatchError: NullType (of class org.apache.spark.sql.catalyst.types.NullType$)
at org.apache.spark.sql.types.util.DataTypeConversions$.asJavaDataType(DataTypeConversions.scala:43)

Author: YanTangZhai <hakeemzhai@tencent.com>
Author: yantangzhai <tyz0303@163.com>
Author: Michael Armbrust <michael@databricks.com>

Closes #3538 from YanTangZhai/MatchNullType and squashes the following commits:

e052dff [yantangzhai] [SPARK-4676] [SQL] JavaSchemaRDD.schema may throw NullType MatchError if sql has null
4b4bb34 [yantangzhai] [SPARK-4676] [SQL] JavaSchemaRDD.schema may throw NullType MatchError if sql has null
896c7b7 [yantangzhai] fix NullType MatchError in JavaSchemaRDD when sql has null
6e643f8 [YanTangZhai] Merge pull request #11 from apache/master
e249846 [YanTangZhai] Merge pull request #10 from apache/master
d26d982 [YanTangZhai] Merge pull request #9 from apache/master
76d4027 [YanTangZhai] Merge pull request #8 from apache/master
03b62b0 [YanTangZhai] Merge pull request #7 from apache/master
8a00106 [YanTangZhai] Merge pull request #6 from apache/master
cbcba66 [YanTangZhai] Merge pull request #3 from apache/master
cdef539 [YanTangZhai] Merge pull request #1 from apache/master
2014-12-02 14:15:12 -08:00
Kousuke Saruta e75e04f980 [SPARK-4536][SQL] Add sqrt and abs to Spark SQL DSL
Spark SQL has embeded sqrt and abs but DSL doesn't support those functions.

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #3401 from sarutak/dsl-missing-operator and squashes the following commits:

07700cf [Kousuke Saruta] Modified Literal(null, NullType) to Literal(null) in DslQuerySuite
8f366f8 [Kousuke Saruta] Merge branch 'master' of git://git.apache.org/spark into dsl-missing-operator
1b88e2e [Kousuke Saruta] Merge branch 'master' of git://git.apache.org/spark into dsl-missing-operator
0396f89 [Kousuke Saruta] Added sqrt and abs to Spark SQL DSL
2014-12-02 12:07:52 -08:00
ravipesala 6a9ff19dc0 [SPARK-4650][SQL] Supporting multi column support in countDistinct function like count(distinct c1,c2..) in Spark SQL
Supporting multi column support in countDistinct function like count(distinct c1,c2..) in Spark SQL

Author: ravipesala <ravindra.pesala@huawei.com>
Author: Michael Armbrust <michael@databricks.com>

Closes #3511 from ravipesala/countdistinct and squashes the following commits:

cc4dbb1 [ravipesala] style
070e12a [ravipesala] Supporting multi column support in count(distinct c1,c2..) in Spark SQL
2014-12-01 13:28:04 -08:00
Kousuke Saruta dd1c9cb36c [SPARK-4487][SQL] Fix attribute reference resolution error when using ORDER BY.
When we use ORDER BY clause, at first, attributes referenced by projection are resolved (1).
And then, attributes referenced at ORDER BY clause are resolved (2).
 But when resolving attributes referenced at ORDER BY clause, the resolution result generated in (1) is discarded so for example, following query fails.

    SELECT c1 + c2 FROM mytable ORDER BY c1;

The query above fails because when resolving the attribute reference 'c1', the resolution result of 'c2' is discarded.

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #3363 from sarutak/SPARK-4487 and squashes the following commits:

fd314f3 [Kousuke Saruta] Fixed attribute resolution logic in Analyzer
6e60c20 [Kousuke Saruta] Fixed conflicts
cb5b7e9 [Kousuke Saruta] Added test case for SPARK-4487
282d529 [Kousuke Saruta] Fixed attributes reference resolution error
b6123e6 [Kousuke Saruta] Merge branch 'master' of git://git.apache.org/spark into concat-feature
317b7fb [Kousuke Saruta] WIP
2014-11-24 12:54:37 -08:00
Takuya UESHIN 2c2e7a44db [SPARK-4318][SQL] Fix empty sum distinct.
Executing sum distinct for empty table throws `java.lang.UnsupportedOperationException: empty.reduceLeft`.

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #3184 from ueshin/issues/SPARK-4318 and squashes the following commits:

8168c42 [Takuya UESHIN] Merge branch 'master' into issues/SPARK-4318
66fdb0a [Takuya UESHIN] Re-refine aggregate functions.
6186eb4 [Takuya UESHIN] Fix Sum of GeneratedAggregate.
d2975f6 [Takuya UESHIN] Refine Sum and Average of GeneratedAggregate.
1bba675 [Takuya UESHIN] Refine Sum, SumDistinct and Average functions.
917e533 [Takuya UESHIN] Use aggregate instead of groupBy().
1a5f874 [Takuya UESHIN] Add tests to be executed as non-partial aggregation.
a5a57d2 [Takuya UESHIN] Fix empty Average.
22799dc [Takuya UESHIN] Fix empty Sum and SumDistinct.
65b7dd2 [Takuya UESHIN] Fix empty sum distinct.
2014-11-20 15:41:24 -08:00
ravipesala 98e9419784 [SPARK-4513][SQL] Support relational operator '<=>' in Spark SQL
The relational operator '<=>' is not working in Spark SQL. Same works in Spark HiveQL

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #3387 from ravipesala/<=> and squashes the following commits:

7198e90 [ravipesala] Supporting relational operator '<=>' in Spark SQL
2014-11-20 15:34:03 -08:00
Dan McClary b8e6886fb8 [SPARK-4228][SQL] SchemaRDD to JSON
Here's a simple fix for SchemaRDD to JSON.

Author: Dan McClary <dan.mcclary@gmail.com>

Closes #3213 from dwmclary/SPARK-4228 and squashes the following commits:

d714e1d [Dan McClary] fixed PEP 8 error
cac2879 [Dan McClary] move pyspark comment and doctest to correct location
f9471d3 [Dan McClary] added pyspark doc and doctest
6598cee [Dan McClary] adding complex type queries
1a5fd30 [Dan McClary] removing SPARK-4228 from SQLQuerySuite
4a651f0 [Dan McClary] cleaned PEP and Scala style failures.  Moved tests to JsonSuite
47ceff6 [Dan McClary] cleaned up scala style issues
2ee1e70 [Dan McClary] moved rowToJSON to JsonRDD
4387dd5 [Dan McClary] Added UserDefinedType, cleaned up case formatting
8f7bfb6 [Dan McClary] Map type added to SchemaRDD.toJSON
1b11980 [Dan McClary] Map and UserDefinedTypes partially done
11d2016 [Dan McClary] formatting and unicode deserialization default fixed
6af72d1 [Dan McClary] deleted extaneous comment
4d11c0c [Dan McClary] JsonFactory rewrite of toJSON for SchemaRDD
149dafd [Dan McClary] wrapped scala toJSON in sql.py
5e5eb1b [Dan McClary] switched to Jackson for JSON processing
6c94a54 [Dan McClary] added toJSON to pyspark SchemaRDD
aaeba58 [Dan McClary] added toJSON to pyspark SchemaRDD
1d171aa [Dan McClary] upated missing brace on if statement
319e3ba [Dan McClary] updated to upstream master with merged SPARK-4228
424f130 [Dan McClary] tests pass, ready for pull and PR
626a5b1 [Dan McClary] added toJSON to SchemaRDD
f7d166a [Dan McClary] added toJSON method
5d34e37 [Dan McClary] merge resolved
d6d19e9 [Dan McClary] pr example
2014-11-20 13:44:19 -08:00
Cheng Lian abf29187f0 [SPARK-3938][SQL] Names in-memory columnar RDD with corresponding table name
This PR enables the Web UI storage tab to show the in-memory table name instead of the mysterious query plan string as the name of the in-memory columnar RDD.

Note that after #2501, a single columnar RDD can be shared by multiple in-memory tables, as long as their query results are the same. In this case, only the first cached table name is shown. For example:

```sql
CACHE TABLE first AS SELECT * FROM src;
CACHE TABLE second AS SELECT * FROM src;
```

The Web UI only shows "In-memory table first".

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Author: Cheng Lian <lian@databricks.com>

Closes #3383 from liancheng/columnar-rdd-name and squashes the following commits:

071907f [Cheng Lian] Fixes tests
12ddfa6 [Cheng Lian] Names in-memory columnar RDD with corresponding table name
2014-11-20 13:12:24 -08:00
Cheng Lian 423baea953 [SPARK-4468][SQL] Fixes Parquet filter creation for inequality predicates with literals on the left hand side
For expressions like `10 < someVar`, we should create an `Operators.Gt` filter, but right now an `Operators.Lt` is created. This issue affects all inequality predicates with literals on the left hand side.

(This bug existed before #3317 and affects branch-1.1. #3338 was opened to backport this to branch-1.1.)

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Author: Cheng Lian <lian@databricks.com>

Closes #3334 from liancheng/fix-parquet-comp-filter and squashes the following commits:

0130897 [Cheng Lian] Fixes Parquet comparison filter generation
2014-11-18 17:41:54 -08:00
Cheng Lian 36b0956a3e [SPARK-4453][SPARK-4213][SQL] Simplifies Parquet filter generation code
While reviewing PR #3083 and #3161, I noticed that Parquet record filter generation code can be simplified significantly according to the clue stated in [SPARK-4453](https://issues.apache.org/jira/browse/SPARK-4213). This PR addresses both SPARK-4453 and SPARK-4213 with this simplification.

While generating `ParquetTableScan` operator, we need to remove all Catalyst predicates that have already been pushed down to Parquet. Originally, we first generate the record filter, and then call `findExpression` to traverse the generated filter to find out all pushed down predicates [[1](64c6b9bad5/sql/core/src/main/scala/org/apache/spark/sql/execution/SparkStrategies.scala (L213-L228))]. In this way, we have to introduce the `CatalystFilter` class hierarchy to bind the Catalyst predicates together with their generated Parquet filter, and complicate the code base a lot.

The basic idea of this PR is that, we don't need `findExpression` after filter generation, because we already know a predicate can be pushed down if we can successfully generate its corresponding Parquet filter. SPARK-4213 is fixed by returning `None` for any unsupported predicate type.

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Author: Cheng Lian <lian@databricks.com>

Closes #3317 from liancheng/simplify-parquet-filters and squashes the following commits:

d6a9499 [Cheng Lian] Fixes import styling issue
43760e8 [Cheng Lian] Simplifies Parquet filter generation logic
2014-11-17 16:55:12 -08:00
Cheng Lian 5ce7dae859 [SQL] Makes conjunction pushdown more aggressive for in-memory table
This is inspired by the [Parquet record filter generation code](64c6b9bad5/sql/core/src/main/scala/org/apache/spark/sql/parquet/ParquetFilters.scala (L387-L400)).

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Author: Cheng Lian <lian@databricks.com>

Closes #3318 from liancheng/aggresive-conj-pushdown and squashes the following commits:

78b69d2 [Cheng Lian] Makes conjunction pushdown more aggressive
2014-11-17 15:33:13 -08:00
Michael Armbrust 64c6b9bad5 [SPARK-4410][SQL] Add support for external sort
Adds a new operator that uses Spark's `ExternalSort` class.  It is off by default now, but we might consider making it the default if benchmarks show that it does not regress performance.

Author: Michael Armbrust <michael@databricks.com>

Closes #3268 from marmbrus/externalSort and squashes the following commits:

48b9726 [Michael Armbrust] comments
b98799d [Michael Armbrust] Add test
afd7562 [Michael Armbrust] Add support for external sort.
2014-11-16 21:55:57 -08:00
Cheng Lian 0c7b66bd44 [SPARK-4322][SQL] Enables struct fields as sub expressions of grouping fields
While resolving struct fields, the resulted `GetField` expression is wrapped with an `Alias` to make it a named expression. Assume `a` is a struct instance with a field `b`, then `"a.b"` will be resolved as `Alias(GetField(a, "b"), "b")`. Thus, for this following SQL query:

```sql
SELECT a.b + 1 FROM t GROUP BY a.b + 1
```

the grouping expression is

```scala
Add(GetField(a, "b"), Literal(1, IntegerType))
```

while the aggregation expression is

```scala
Add(Alias(GetField(a, "b"), "b"), Literal(1, IntegerType))
```

This mismatch makes the above SQL query fail during the both analysis and execution phases. This PR fixes this issue by removing the alias when substituting aggregation expressions.

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Author: Cheng Lian <lian@databricks.com>

Closes #3248 from liancheng/spark-4322 and squashes the following commits:

23a46ea [Cheng Lian] Code simplification
dd20a79 [Cheng Lian] Should only trim aliases around `GetField`s
7f46532 [Cheng Lian] Enables struct fields as sub expressions of grouping fields
2014-11-14 15:09:36 -08:00
Michael Armbrust 4b4b50c9e5 [SQL] Don't shuffle code generated rows
When sort based shuffle and code gen are on we were trying to ship the code generated rows during a shuffle.  This doesn't work because the classes don't exist on the other side.  Instead we now copy into a generic row before shipping.

Author: Michael Armbrust <michael@databricks.com>

Closes #3263 from marmbrus/aggCodeGen and squashes the following commits:

f6ba8cf [Michael Armbrust] fix and test
2014-11-14 15:03:23 -08:00
Michael Armbrust e47c387639 [SPARK-4391][SQL] Configure parquet filters using SQLConf
This is more uniform with the rest of SQL configuration and allows it to be turned on and off without restarting the SparkContext.  In this PR I also turn off filter pushdown by default due to a number of outstanding issues (in particular SPARK-4258).  When those are fixed we should turn it back on by default.

Author: Michael Armbrust <michael@databricks.com>

Closes #3258 from marmbrus/parquetFilters and squashes the following commits:

5655bfe [Michael Armbrust] Remove extra line.
15e9a98 [Michael Armbrust] Enable filters for tests
75afd39 [Michael Armbrust] Fix comments
78fa02d [Michael Armbrust] off by default
e7f9e16 [Michael Armbrust] First draft of correctly configuring parquet filter pushdown
2014-11-14 14:59:35 -08:00
Michael Armbrust 77e845ca77 [SPARK-4394][SQL] Data Sources API Improvements
This PR adds two features to the data sources API:
 - Support for pushing down `IN` filters
 - The ability for relations to optionally provide information about their `sizeInBytes`.

Author: Michael Armbrust <michael@databricks.com>

Closes #3260 from marmbrus/sourcesImprovements and squashes the following commits:

9a5e171 [Michael Armbrust] Use method instead of configuration directly
99c0e6b [Michael Armbrust] Add support for sizeInBytes.
416f167 [Michael Armbrust] Support for IN in data sources API.
2a04ab3 [Michael Armbrust] Simplify implementation of InSet.
2014-11-14 12:00:08 -08:00
Daoyuan Wang a1fc059b69 [SPARK-4149][SQL] ISO 8601 support for json date time strings
This implement the feature davies mentioned in https://github.com/apache/spark/pull/2901#discussion-diff-19313312

Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #3012 from adrian-wang/iso8601 and squashes the following commits:

50df6e7 [Daoyuan Wang] json data timestamp ISO8601 support
2014-11-10 17:26:03 -08:00
Takuya UESHIN dbf10588de [SPARK-4319][SQL] Enable an ignored test "null count".
Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #3185 from ueshin/issues/SPARK-4319 and squashes the following commits:

a44a38e [Takuya UESHIN] Enable an ignored test "null count".
2014-11-10 15:55:15 -08:00
Kousuke Saruta 14c54f1876 [SPARK-4213][SQL] ParquetFilters - No support for LT, LTE, GT, GTE operators
Following description is quoted from JIRA:

When I issue a hql query against a HiveContext where my predicate uses a column of string type with one of LT, LTE, GT, or GTE operator, I get the following error:
scala.MatchError: StringType (of class org.apache.spark.sql.catalyst.types.StringType$)
Looking at the code in org.apache.spark.sql.parquet.ParquetFilters, StringType is absent from the corresponding functions for creating these filters.
To reproduce, in a Hive 0.13.1 shell, I created the following table (at a specified DB):

    create table sparkbug (
    id int,
    event string
    ) stored as parquet;

Insert some sample data:

    insert into table sparkbug select 1, '2011-06-18' from <some table> limit 1;
    insert into table sparkbug select 2, '2012-01-01' from <some table> limit 1;

Launch a spark shell and create a HiveContext to the metastore where the table above is located.

    import org.apache.spark.sql._
    import org.apache.spark.sql.SQLContext
    import org.apache.spark.sql.hive.HiveContext
    val hc = new HiveContext(sc)
    hc.setConf("spark.sql.shuffle.partitions", "10")
    hc.setConf("spark.sql.hive.convertMetastoreParquet", "true")
    hc.setConf("spark.sql.parquet.compression.codec", "snappy")
    import hc._
    hc.hql("select * from <db>.sparkbug where event >= '2011-12-01'")

A scala.MatchError will appear in the output.

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #3083 from sarutak/SPARK-4213 and squashes the following commits:

4ab6e56 [Kousuke Saruta] WIP
b6890c6 [Kousuke Saruta] Merge branch 'master' of git://git.apache.org/spark into SPARK-4213
9a1fae7 [Kousuke Saruta] Fixed ParquetFilters so that compare Strings
2014-11-07 11:56:40 -08:00
Michael Armbrust 15b58a2234 [SQL] Convert arguments to Scala UDFs
Author: Michael Armbrust <michael@databricks.com>

Closes #3077 from marmbrus/udfsWithUdts and squashes the following commits:

34b5f27 [Michael Armbrust] style
504adef [Michael Armbrust] Convert arguments to Scala UDFs
2014-11-03 18:04:51 -08:00
Cheng Lian c238fb423d [SPARK-4202][SQL] Simple DSL support for Scala UDF
This feature is based on an offline discussion with mengxr, hopefully can be useful for the new MLlib pipeline API.

For the following test snippet

```scala
case class KeyValue(key: Int, value: String)
val testData = sc.parallelize(1 to 10).map(i => KeyValue(i, i.toString)).toSchemaRDD
def foo(a: Int, b: String) => a.toString + b
```

the newly introduced DSL enables the following syntax

```scala
import org.apache.spark.sql.catalyst.dsl._
testData.select(Star(None), foo.call('key, 'value) as 'result)
```

which is equivalent to

```scala
testData.registerTempTable("testData")
sqlContext.registerFunction("foo", foo)
sql("SELECT *, foo(key, value) AS result FROM testData")
```

Author: Cheng Lian <lian@databricks.com>

Closes #3067 from liancheng/udf-dsl and squashes the following commits:

f132818 [Cheng Lian] Adds DSL support for Scala UDF
2014-11-03 13:20:33 -08:00
ravipesala 2b6e1ce6ee [SPARK-4207][SQL] Query which has syntax like 'not like' is not working in Spark SQL
Queries which has 'not like' is not working spark sql.

sql("SELECT * FROM records where value not like 'val%'")
 same query works in Spark HiveQL

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #3075 from ravipesala/SPARK-4207 and squashes the following commits:

35c11e7 [ravipesala] Supported 'not like' syntax in sql
2014-11-03 13:07:41 -08:00
Joseph K. Bradley ebd6480587 [SPARK-3572] [SQL] Internal API for User-Defined Types
This PR adds User-Defined Types (UDTs) to SQL. It is a precursor to using SchemaRDD as a Dataset for the new MLlib API. Currently, the UDT API is private since there is incomplete support (e.g., no Java or Python support yet).

Author: Joseph K. Bradley <joseph@databricks.com>
Author: Michael Armbrust <michael@databricks.com>
Author: Xiangrui Meng <meng@databricks.com>

Closes #3063 from marmbrus/udts and squashes the following commits:

7ccfc0d [Michael Armbrust] remove println
46a3aee [Michael Armbrust] Slightly easier to read test output.
6cc434d [Michael Armbrust] Recursively convert rows.
e369b91 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into udts
15c10a6 [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into sql-udt2
f3c72fe [Joseph K. Bradley] Fixing merge
e13cd8a [Joseph K. Bradley] Removed Vector UDTs
5817b2b [Joseph K. Bradley] style edits
30ce5b2 [Joseph K. Bradley] updates based on code review
d063380 [Joseph K. Bradley] Cleaned up Java UDT Suite, and added warning about element ordering when creating schema from Java Bean
a571bb6 [Joseph K. Bradley] Removed old UDT code (registry and Java UDTs).  Cleaned up other code.  Extended JavaUserDefinedTypeSuite
6fddc1c [Joseph K. Bradley] Made MyLabeledPoint into a Java Bean
20630bc [Joseph K. Bradley] fixed scalastyle
fa86b20 [Joseph K. Bradley] Removed Java UserDefinedType, and made UDTs private[spark] for now
8de957c [Joseph K. Bradley] Modified UserDefinedType to store Java class of user type so that registerUDT takes only the udt argument.
8b242ea [Joseph K. Bradley] Fixed merge error after last merge.  Note: Last merge commit also removed SQL UDT examples from mllib.
7f29656 [Joseph K. Bradley] Moved udt case to top of all matches.  Small cleanups
b028675 [Xiangrui Meng] allow any type in UDT
4500d8a [Xiangrui Meng] update example code
87264a5 [Xiangrui Meng] remove debug code
3143ac3 [Xiangrui Meng] remove unnecessary changes
cfbc321 [Xiangrui Meng] support UDT in parquet
db16139 [Joseph K. Bradley] Added more doc for UserDefinedType.  Removed unused code in Suite
759af7a [Joseph K. Bradley] Added more doc to UserDefineType
63626a4 [Joseph K. Bradley] Updated ScalaReflectionsSuite per @marmbrus suggestions
51e5282 [Joseph K. Bradley] fixed 1 test
f025035 [Joseph K. Bradley] Cleanups before PR.  Added new tests
85872f6 [Michael Armbrust] Allow schema calculation to be lazy, but ensure its available on executors.
dff99d6 [Joseph K. Bradley] Added UDTs for Vectors in MLlib, plus DatasetExample using the UDTs
cd60cb4 [Joseph K. Bradley] Trying to get other SQL tests to run
34a5831 [Joseph K. Bradley] Added MLlib dependency on SQL.
e1f7b9c [Joseph K. Bradley] blah
2f40c02 [Joseph K. Bradley] renamed UDT types
3579035 [Joseph K. Bradley] udt annotation now working
b226b9e [Joseph K. Bradley] Changing UDT to annotation
fea04af [Joseph K. Bradley] more cleanups
964b32e [Joseph K. Bradley] some cleanups
893ee4c [Joseph K. Bradley] udt finallly working
50f9726 [Joseph K. Bradley] udts
04303c9 [Joseph K. Bradley] udts
39f8707 [Joseph K. Bradley] removed old udt suite
273ac96 [Joseph K. Bradley] basic UDT is working, but deserialization has yet to be done
8bebf24 [Joseph K. Bradley] commented out convertRowToScala for debugging
53de70f [Joseph K. Bradley] more udts...
982c035 [Joseph K. Bradley] still working on UDTs
19b2f60 [Joseph K. Bradley] still working on UDTs
0eaeb81 [Joseph K. Bradley] Still working on UDTs
105c5a3 [Joseph K. Bradley] Adding UserDefinedType to SQL, not done yet.
2014-11-02 17:56:00 -08:00
Cheng Lian 9081b9f9f7 [SPARK-2189][SQL] Adds dropTempTable API
This PR adds an API for unregistering temporary tables. If a temporary table has been cached before, it's unpersisted as well.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #3039 from liancheng/unregister-temp-table and squashes the following commits:

54ae99f [Cheng Lian] Fixes Scala styling issue
1948c14 [Cheng Lian] Removes the unpersist argument
aca41d3 [Cheng Lian] Ensures thread safety
7d4fb2b [Cheng Lian] Adds unregisterTempTable API
2014-11-02 16:00:24 -08:00
Yin Huai 06232d23ff [SPARK-4185][SQL] JSON schema inference failed when dealing with type conflicts in arrays
JIRA: https://issues.apache.org/jira/browse/SPARK-4185.

This PR also has the fix of #3052.

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #3056 from yhuai/SPARK-4185 and squashes the following commits:

ed3a5a8 [Yin Huai] Correctly handle type conflicts between structs and primitive types in an array.
2014-11-02 15:46:56 -08:00
Cheng Lian e4b80894bd [SPARK-4182][SQL] Fixes ColumnStats classes for boolean, binary and complex data types
`NoopColumnStats` was once used for binary, boolean and complex data types. This `ColumnStats` doesn't return properly shaped column statistics and causes caching failure if a table contains columns of the aforementioned types.

This PR adds `BooleanColumnStats`, `BinaryColumnStats` and `GenericColumnStats`, used for boolean, binary and all complex data types respectively. In addition, `NoopColumnStats` returns properly shaped column statistics containing null count and row count, but this class is now used for testing purpose only.

Author: Cheng Lian <lian@databricks.com>

Closes #3059 from liancheng/spark-4182 and squashes the following commits:

b398cfd [Cheng Lian] Fixes failed test case
fb3ee85 [Cheng Lian] Fixes SPARK-4182
2014-11-02 15:14:44 -08:00
Michael Armbrust 9c0eb57c73 [SPARK-3247][SQL] An API for adding data sources to Spark SQL
This PR introduces a new set of APIs to Spark SQL to allow other developers to add support for reading data from new sources in `org.apache.spark.sql.sources`.

New sources must implement the interface `BaseRelation`, which is responsible for describing the schema of the data.  BaseRelations have three `Scan` subclasses, which are responsible for producing an RDD containing row objects.  The [various Scan interfaces](https://github.com/marmbrus/spark/blob/foreign/sql/core/src/main/scala/org/apache/spark/sql/sources/package.scala#L50) allow for optimizations such as column pruning and filter push down, when the underlying data source can handle these operations.

By implementing a class that inherits from RelationProvider these data sources can be accessed using using pure SQL.  I've used the functionality to update the JSON support so it can now be used in this way as follows:

```sql
CREATE TEMPORARY TABLE jsonTableSQL
USING org.apache.spark.sql.json
OPTIONS (
  path '/home/michael/data.json'
)
```

Further example usage can be found in the test cases: https://github.com/marmbrus/spark/tree/foreign/sql/core/src/test/scala/org/apache/spark/sql/sources

There is also a library that uses this new API to read avro data available here:
https://github.com/marmbrus/sql-avro

Author: Michael Armbrust <michael@databricks.com>

Closes #2475 from marmbrus/foreign and squashes the following commits:

1ed6010 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into foreign
ab2c31f [Michael Armbrust] fix test
1d41bb5 [Michael Armbrust] unify argument names
5b47901 [Michael Armbrust] Remove sealed, more filter types
fab154a [Michael Armbrust] Merge remote-tracking branch 'origin/master' into foreign
e3e690e [Michael Armbrust] Add hook for extraStrategies
a70d602 [Michael Armbrust] Fix style, more tests, FilteredSuite => PrunedFilteredSuite
70da6d9 [Michael Armbrust] Modify API to ease binary compatibility and interop with Java
7d948ae [Michael Armbrust] Fix equality of AttributeReference.
5545491 [Michael Armbrust] Address comments
5031ac3 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into foreign
22963ef [Michael Armbrust] package objects compile wierdly...
b069146 [Michael Armbrust] traits => abstract classes
34f836a [Michael Armbrust] Make @DeveloperApi
0d74bcf [Michael Armbrust] Add documention on object life cycle
3e06776 [Michael Armbrust] remove line wraps
de3b68c [Michael Armbrust] Remove empty file
360cb30 [Michael Armbrust] style and java api
2957875 [Michael Armbrust] add override
0fd3a07 [Michael Armbrust] Draft of data sources API
2014-11-02 15:08:35 -08:00
Matei Zaharia 23f966f475 [SPARK-3930] [SPARK-3933] Support fixed-precision decimal in SQL, and some optimizations
- Adds optional precision and scale to Spark SQL's decimal type, which behave similarly to those in Hive 13 (https://cwiki.apache.org/confluence/download/attachments/27362075/Hive_Decimal_Precision_Scale_Support.pdf)
- Replaces our internal representation of decimals with a Decimal class that can store small values in a mutable Long, saving memory in this situation and letting some operations happen directly on Longs

This is still marked WIP because there are a few TODOs, but I'll remove that tag when done.

Author: Matei Zaharia <matei@databricks.com>

Closes #2983 from mateiz/decimal-1 and squashes the following commits:

35e6b02 [Matei Zaharia] Fix issues after merge
227f24a [Matei Zaharia] Review comments
31f915e [Matei Zaharia] Implement Davies's suggestions in Python
eb84820 [Matei Zaharia] Support reading/writing decimals as fixed-length binary in Parquet
4dc6bae [Matei Zaharia] Fix decimal support in PySpark
d1d9d68 [Matei Zaharia] Fix compile error and test issues after rebase
b28933d [Matei Zaharia] Support decimal precision/scale in Hive metastore
2118c0d [Matei Zaharia] Some test and bug fixes
81db9cb [Matei Zaharia] Added mutable Decimal that will be more efficient for small precisions
7af0c3b [Matei Zaharia] Add optional precision and scale to DecimalType, but use Unlimited for now
ec0a947 [Matei Zaharia] Make the result of AVG on Decimals be Decimal, not Double
2014-11-01 19:29:14 -07:00
Xiangrui Meng 1d4f355203 [SPARK-3569][SQL] Add metadata field to StructField
Add `metadata: Metadata` to `StructField` to store extra information of columns. `Metadata` is a simple wrapper over `Map[String, Any]` with value types restricted to Boolean, Long, Double, String, Metadata, and arrays of those types. SerDe is via JSON.

Metadata is preserved through simple operations like `SELECT`.

marmbrus liancheng

Author: Xiangrui Meng <meng@databricks.com>
Author: Michael Armbrust <michael@databricks.com>

Closes #2701 from mengxr/structfield-metadata and squashes the following commits:

dedda56 [Xiangrui Meng] merge remote
5ef930a [Xiangrui Meng] Merge remote-tracking branch 'apache/master' into structfield-metadata
c35203f [Xiangrui Meng] Merge pull request #1 from marmbrus/pr/2701
886b85c [Michael Armbrust] Expose Metadata and MetadataBuilder through the public scala and java packages.
589f314 [Xiangrui Meng] Merge remote-tracking branch 'apache/master' into structfield-metadata
1e2abcf [Xiangrui Meng] change default value of metadata to None in python
611d3c2 [Xiangrui Meng] move metadata from Expr to NamedExpr
ddfcfad [Xiangrui Meng] Merge remote-tracking branch 'apache/master' into structfield-metadata
a438440 [Xiangrui Meng] Merge remote-tracking branch 'apache/master' into structfield-metadata
4266f4d [Xiangrui Meng] add StructField.toString back for backward compatibility
3f49aab [Xiangrui Meng] remove StructField.toString
24a9f80 [Xiangrui Meng] Merge remote-tracking branch 'apache/master' into structfield-metadata
473a7c5 [Xiangrui Meng] merge master
c9d7301 [Xiangrui Meng] organize imports
1fcbf13 [Xiangrui Meng] change metadata type in StructField for Scala/Java
60cc131 [Xiangrui Meng] add doc and header
60614c7 [Xiangrui Meng] add metadata
e42c452 [Xiangrui Meng] merge master
93518fb [Xiangrui Meng] support metadata in python
905bb89 [Xiangrui Meng] java conversions
618e349 [Xiangrui Meng] make tests work in scala
61b8e0f [Xiangrui Meng] merge master
7e5a322 [Xiangrui Meng] do not output metadata in StructField.toString
c41a664 [Xiangrui Meng] merge master
d8af0ed [Xiangrui Meng] move tests to SQLQuerySuite
67fdebb [Xiangrui Meng] add test on join
d65072e [Xiangrui Meng] remove Map.empty
367d237 [Xiangrui Meng] add test
c194d5e [Xiangrui Meng] add metadata field to StructField and Attribute
2014-11-01 14:37:00 -07:00
ravipesala ea465af12d [SPARK-4154][SQL] Query does not work if it has "not between " in Spark SQL and HQL
if the query contains "not between" does not work like.
SELECT * FROM src where key not between 10 and 20'

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #3017 from ravipesala/SPARK-4154 and squashes the following commits:

65fc89e [ravipesala] Handled admin comments
32e6d42 [ravipesala] 'not between' is not working
2014-10-31 11:33:20 -07:00
Yash Datta 2e35e24294 [SPARK-3968][SQL] Use parquet-mr filter2 api
The parquet-mr project has introduced a new filter api  (https://github.com/apache/incubator-parquet-mr/pull/4), along with several fixes . It can also eliminate entire RowGroups depending on certain statistics like min/max
We can leverage that to further improve performance of queries with filters.
Also filter2 api introduces ability to create custom filters. We can create a custom filter for the optimized In clause (InSet) , so that elimination happens in the ParquetRecordReader itself

Author: Yash Datta <Yash.Datta@guavus.com>

Closes #2841 from saucam/master and squashes the following commits:

8282ba0 [Yash Datta] SPARK-3968: fix scala code style and add some more tests for filtering on optional columns
515df1c [Yash Datta] SPARK-3968: Add a test case for filter pushdown on optional column
5f4530e [Yash Datta] SPARK-3968: Fix scala code style
f304667 [Yash Datta] SPARK-3968: Using task metadata strategy for row group filtering
ec53e92 [Yash Datta] SPARK-3968: No push down should result in case we are unable to create a record filter
48163c3 [Yash Datta] SPARK-3968: Code cleanup
cc7b596 [Yash Datta] SPARK-3968: 1. Fix RowGroupFiltering not working             2. Use the serialization/deserialization from Parquet library for filter pushdown
caed851 [Yash Datta] Revert "SPARK-3968: Not pushing the filters in case of OPTIONAL columns" since filtering on optional columns is now supported in filter2 api
49703c9 [Yash Datta] SPARK-3968: Not pushing the filters in case of OPTIONAL columns
9d09741 [Yash Datta] SPARK-3968: Change parquet filter pushdown to use filter2 api of parquet-mr
2014-10-30 17:17:31 -07:00
ravipesala 9b6ebe33db [SPARK-4120][SQL] Join of multiple tables with syntax like SELECT .. FROM T1,T2,T3.. does not work in SparkSQL
Right now it works for only 2 tables like below query.
sql("SELECT * FROM records1 as a,records2 as b where a.key=b.key ")

But it does not work for more than 2 tables like below query
sql("SELECT * FROM records1 as a,records2 as b,records3 as c where a.key=b.key and a.key=c.key").

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #2987 from ravipesala/multijoin and squashes the following commits:

429b005 [ravipesala] Support multiple joins
2014-10-30 17:15:45 -07:00
Daoyuan Wang 3535467663 [SPARK-4003] [SQL] add 3 types for java SQL context
In JavaSqlContext, we need to let java program use big decimal, timestamp, date types.

Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #2850 from adrian-wang/javacontext and squashes the following commits:

4c4292c [Daoyuan Wang] change underlying type of JavaSchemaRDD as scala
bb0508f [Daoyuan Wang] add test cases
3c58b0d [Daoyuan Wang] add 3 types for java SQL context
2014-10-29 12:10:58 -07:00
Cheng Hao 4b55482abf [SPARK-3343] [SQL] Add serde support for CTAS
Currently, `CTAS` (Create Table As Select) doesn't support specifying the `SerDe` in HQL. This PR will pass down the `ASTNode` into the physical operator `execution.CreateTableAsSelect`, which will extract the `CreateTableDesc` object via Hive `SemanticAnalyzer`. In the meantime, I also update the `HiveMetastoreCatalog.createTable` to optionally support the `CreateTableDesc` for table creation.

Author: Cheng Hao <hao.cheng@intel.com>

Closes #2570 from chenghao-intel/ctas_serde and squashes the following commits:

e011ef5 [Cheng Hao] shim for both 0.12 & 0.13.1
cfb3662 [Cheng Hao] revert to hive 0.12
c8a547d [Cheng Hao] Support SerDe properties within CTAS
2014-10-28 14:36:06 -07:00
Daoyuan Wang 47a40f60d6 [SPARK-3988][SQL] add public API for date type
Add json and python api for date type.
By using Pickle, `java.sql.Date` was serialized as calendar, and recognized in python as `datetime.datetime`.

Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #2901 from adrian-wang/spark3988 and squashes the following commits:

c51a24d [Daoyuan Wang] convert datetime to date
5670626 [Daoyuan Wang] minor line combine
f760d8e [Daoyuan Wang] fix indent
444f100 [Daoyuan Wang] fix a typo
1d74448 [Daoyuan Wang] fix scala style
8d7dd22 [Daoyuan Wang] add json and python api for date type
2014-10-28 13:43:25 -07:00
ravipesala 5807cb40ae [SPARK-3814][SQL] Support for Bitwise AND(&), OR(|) ,XOR(^), NOT(~) in Spark HQL and SQL
Currently there is no support of Bitwise & , | in Spark HiveQl and Spark SQL as well. So this PR support the same.
I am closing https://github.com/apache/spark/pull/2926 as it has conflicts to merge. And also added support for Bitwise AND(&), OR(|) ,XOR(^), NOT(~) And I handled all review comments in that PR

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #2961 from ravipesala/SPARK-3814-NEW4 and squashes the following commits:

a391c7a [ravipesala] Rebase with master
2014-10-28 13:36:06 -07:00
Yin Huai 27470d3406 [SQL] Correct a variable name in JavaApplySchemaSuite.applySchemaToJSON
`schemaRDD2` is not tested because `schemaRDD1` is registered again.

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #2869 from yhuai/JavaApplySchemaSuite and squashes the following commits:

95fe894 [Yin Huai] Correct variable name.
2014-10-27 20:50:09 -07:00
Cheng Lian 1d7bcc8840 [SQL] Fixes caching related JoinSuite failure
PR #2860 refines in-memory table statistics and enables broader broadcasted hash join optimization for in-memory tables. This makes `JoinSuite` fail when some test suite caches test table `testData` and gets executed before `JoinSuite`. Because expected `ShuffledHashJoin`s are optimized to `BroadcastedHashJoin` according to collected in-memory table statistics.

This PR fixes this issue by clearing the cache before testing join operator selection. A separate test case is also added to test broadcasted hash join operator selection.

Author: Cheng Lian <lian@databricks.com>

Closes #2960 from liancheng/fix-join-suite and squashes the following commits:

715b2de [Cheng Lian] Fixes caching related JoinSuite failure
2014-10-27 10:06:09 -07:00
Kousuke Saruta ace41e8bf2 [SPARK-3959][SPARK-3960][SQL] SqlParser fails to parse literal -9223372036854775808 (Long.MinValue). / We can apply unary minus only to literal.
SqlParser fails to parse -9223372036854775808 (Long.MinValue) so we cannot write queries such like as follows.

    SELECT value FROM someTable WHERE value > -9223372036854775808

Additionally, because of the wrong syntax definition, we cannot apply unary minus only to literal. So, we cannot write such expressions.

    -(value1 + value2) // Parenthesized expressions
    -column // Columns
    -MAX(column) // Functions

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #2816 from sarutak/spark-sql-dsl-improvement2 and squashes the following commits:

32a5005 [Kousuke Saruta] Remove test setting for thriftserver
c2bab5e [Kousuke Saruta] Fixed SPARK-3959 and SPARK-3960
2014-10-26 16:40:29 -07:00
ravipesala 974d7b238b [SPARK-3483][SQL] Special chars in column names
Supporting special chars in column names by using back ticks. Closed https://github.com/apache/spark/pull/2804 and created this PR as it has merge conflicts

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #2927 from ravipesala/SPARK-3483-NEW and squashes the following commits:

f6329f3 [ravipesala] Rebased with master
2014-10-26 16:36:11 -07:00
Yin Huai 0481aaa8d7 [SPARK-4068][SQL] NPE in jsonRDD schema inference
Please refer to added tests for cases that can trigger the bug.

JIRA: https://issues.apache.org/jira/browse/SPARK-4068

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #2918 from yhuai/SPARK-4068 and squashes the following commits:

d360eae [Yin Huai] Handle nulls when building key paths from elements of an array.
2014-10-26 16:32:02 -07:00
Yin Huai 05308426f0 [SPARK-4052][SQL] Use scala.collection.Map for pattern matching instead of using Predef.Map (it is scala.collection.immutable.Map)
Please check https://issues.apache.org/jira/browse/SPARK-4052 for cases triggering this bug.

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #2899 from yhuai/SPARK-4052 and squashes the following commits:

1188f70 [Yin Huai] Address liancheng's comments.
b6712be [Yin Huai] Use scala.collection.Map instead of Predef.Map (scala.collection.immutable.Map).
2014-10-26 16:30:15 -07:00
Cheng Lian 2838bf8aad [SPARK-3537][SPARK-3914][SQL] Refines in-memory columnar table statistics
This PR refines in-memory columnar table statistics:

1. adds 2 more statistics for in-memory table columns: `count` and `sizeInBytes`
1. adds filter pushdown support for `IS NULL` and `IS NOT NULL`.
1. caches and propagates statistics in `InMemoryRelation` once the underlying cached RDD is materialized.

   Statistics are collected to driver side with an accumulator.

This PR also fixes SPARK-3914 by properly propagating in-memory statistics.

Author: Cheng Lian <lian@databricks.com>

Closes #2860 from liancheng/propagates-in-mem-stats and squashes the following commits:

0cc5271 [Cheng Lian] Restricts visibility of o.a.s.s.c.p.l.Statistics
c5ff904 [Cheng Lian] Fixes test table name conflict
a8c818d [Cheng Lian] Refines tests
1d01074 [Cheng Lian] Bug fix: shouldn't call STRING.actualSize on null string value
7dc6a34 [Cheng Lian] Adds more in-memory table statistics and propagates them properly
2014-10-26 16:10:09 -07:00
Michael Armbrust 0e886610ee [SPARK-4050][SQL] Fix caching of temporary tables with projections.
Previously cached data was found by `sameResult` plan matching on optimized plans.  This technique however fails to locate the cached data when a temporary table with a projection is queried with a further reduced projection.  The failure is due to the fact that optimization will collapse the projections, producing a plan that no longer produces the sameResult as the cached data (though the cached data still subsumes the desired data).  For example consider the following previously failing test case.

```scala
sql("CACHE TABLE tempTable AS SELECT key FROM testData")
assertCached(sql("SELECT COUNT(*) FROM tempTable"))
```

In this PR I change the matching to occur after analysis instead of optimization, so that in the case of temporary tables, the plans will always match.  I think this should work generally, however, this error does raise questions about the need to do more thorough subsumption checking when locating cached data.

Another question is what sort of semantics we want to provide when uncaching data from temporary tables.  For example consider the following sequence of commands:

```scala
testData.select('key).registerTempTable("tempTable1")
testData.select('key).registerTempTable("tempTable2")
cacheTable("tempTable1")

// This obviously works.
assertCached(sql("SELECT COUNT(*) FROM tempTable1"))

// It seems good that this works ...
assertCached(sql("SELECT COUNT(*) FROM tempTable2"))

// ... but is this valid?
uncacheTable("tempTable2")

// Should this still be cached?
assertCached(sql("SELECT COUNT(*) FROM tempTable1"), 0)
```

Author: Michael Armbrust <michael@databricks.com>

Closes #2912 from marmbrus/cachingBug and squashes the following commits:

9c822d4 [Michael Armbrust] remove commented out code
5c72fb7 [Michael Armbrust] Add a test case / question about uncaching semantics.
63a23e4 [Michael Armbrust] Perform caching on analyzed instead of optimized plan.
03f1cfe [Michael Armbrust] Clean-up / add tests to SameResult suite.
2014-10-24 10:52:25 -07:00
Michael Armbrust e9c1afa87b [SPARK-3800][SQL] Clean aliases from grouping expressions
Author: Michael Armbrust <michael@databricks.com>

Closes #2658 from marmbrus/nestedAggs and squashes the following commits:

862b763 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into nestedAggs
3234521 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into nestedAggs
8b06fdc [Michael Armbrust] possible fix for grouping on nested fields
2014-10-20 15:32:17 -07:00
Cheng Lian 1b3ce61ce9 [SPARK-3906][SQL] Adds multiple join support for SQLContext
Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2767 from liancheng/multi-join and squashes the following commits:

9dc0d18 [Cheng Lian] Adds multiple join support for SQLContext
2014-10-20 15:29:54 -07:00
Michael Armbrust 371321cade [SQL] Add type checking debugging functions
Adds some functions that were very useful when trying to track down the bug from #2656.  This change also changes the tree output for query plans to include the `'` prefix to unresolved nodes and `!` prefix to nodes that refer to non-existent attributes.

Author: Michael Armbrust <michael@databricks.com>

Closes #2657 from marmbrus/debugging and squashes the following commits:

654b926 [Michael Armbrust] Clean-up, add tests
763af15 [Michael Armbrust] Add typeChecking debugging functions
8c69303 [Michael Armbrust] Add inputSet, references to QueryPlan. Improve tree string with a prefix to denote invalid or unresolved nodes.
fbeab54 [Michael Armbrust] Better toString, factories for AttributeSet.
2014-10-13 13:46:34 -07:00
Cheng Lian 56102dc2d8 [SPARK-2066][SQL] Adds checks for non-aggregate attributes with aggregation
This PR adds a new rule `CheckAggregation` to the analyzer to provide better error message for non-aggregate attributes with aggregation.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2774 from liancheng/non-aggregate-attr and squashes the following commits:

5246004 [Cheng Lian] Passes test suites
bf1878d [Cheng Lian] Adds checks for non-aggregate attributes with aggregation
2014-10-13 13:36:39 -07:00
Daoyuan Wang 2ac40da3f9 [SPARK-3407][SQL]Add Date type support
Author: Daoyuan Wang <daoyuan.wang@intel.com>

Closes #2344 from adrian-wang/date and squashes the following commits:

f15074a [Daoyuan Wang] remove outdated lines
2038085 [Daoyuan Wang] update return type
00fe81f [Daoyuan Wang] address lian cheng's comments
0df6ea1 [Daoyuan Wang] rebase and remove simple string
bb1b1ef [Daoyuan Wang] remove failing test
aa96735 [Daoyuan Wang] not cast for same type compare
30bf48b [Daoyuan Wang] resolve rebase conflict
617d1a8 [Daoyuan Wang] add date_udf case to white list
c37e848 [Daoyuan Wang] comment update
5429212 [Daoyuan Wang] change to long
f8f219f [Daoyuan Wang] revise according to Cheng Hao
0e0a4f5 [Daoyuan Wang] minor format
4ddcb92 [Daoyuan Wang] add java api for date
0e3110e [Daoyuan Wang] try to fix timezone issue
17fda35 [Daoyuan Wang] set test list
2dfbb5b [Daoyuan Wang] support date type
2014-10-13 13:33:12 -07:00
Reynold Xin 39ccabacf1 [SPARK-3861][SQL] Avoid rebuilding hash tables for broadcast joins on each partition
Author: Reynold Xin <rxin@apache.org>

Closes #2727 from rxin/SPARK-3861-broadcast-hash-2 and squashes the following commits:

9c7b1a2 [Reynold Xin] Revert "Reuse CompactBuffer in UniqueKeyHashedRelation."
97626a1 [Reynold Xin] Reuse CompactBuffer in UniqueKeyHashedRelation.
7fcffb5 [Reynold Xin] Make UniqueKeyHashedRelation private[joins].
18eb214 [Reynold Xin] Merge branch 'SPARK-3861-broadcast-hash' into SPARK-3861-broadcast-hash-1
4b9d0c9 [Reynold Xin] UniqueKeyHashedRelation.get should return null if the value is null.
e0ebdd1 [Reynold Xin] Added a test case.
90b58c0 [Reynold Xin] [SPARK-3861] Avoid rebuilding hash tables on each partition
0c0082b [Reynold Xin] Fix line length.
cbc664c [Reynold Xin] Rename join -> joins package.
a070d44 [Reynold Xin] Fix line length in HashJoin
a39be8c [Reynold Xin] [SPARK-3857] Create a join package for various join operators.
2014-10-13 11:50:42 -07:00
Cheng Lian 421382d0e7 [SPARK-3824][SQL] Sets in-memory table default storage level to MEMORY_AND_DISK
Using `MEMORY_AND_DISK` as default storage level for in-memory table caching. Due to the in-memory columnar representation, recomputing an in-memory cached table partitions can be very expensive.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2686 from liancheng/spark-3824 and squashes the following commits:

35d2ed0 [Cheng Lian] Removes extra space
1ab7967 [Cheng Lian] Reduces test data size to fit DiskStore.getBytes()
ba565f0 [Cheng Lian] Maks CachedBatch serializable
07f0204 [Cheng Lian] Sets in-memory table default storage level to MEMORY_AND_DISK
2014-10-09 18:26:43 -07:00
Cheng Lian edf02da389 [SPARK-3654][SQL] Unifies SQL and HiveQL parsers
This PR is a follow up of #2590, and tries to introduce a top level SQL parser entry point for all SQL dialects supported by Spark SQL.

A top level parser `SparkSQLParser` is introduced to handle the syntaxes that all SQL dialects should recognize (e.g. `CACHE TABLE`, `UNCACHE TABLE` and `SET`, etc.). For all the syntaxes this parser doesn't recognize directly, it fallbacks to a specified function that tries to parse arbitrary input to a `LogicalPlan`. This function is typically another parser combinator like `SqlParser`. DDL syntaxes introduced in #2475 can be moved to here.

The `ExtendedHiveQlParser` now only handle Hive specific extensions.

Also took the chance to refactor/reformat `SqlParser` for better readability.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2698 from liancheng/gen-sql-parser and squashes the following commits:

ceada76 [Cheng Lian] Minor styling fixes
9738934 [Cheng Lian] Minor refactoring, removes optional trailing ";" in the parser
bb2ab12 [Cheng Lian] SET property value can be empty string
ce8860b [Cheng Lian] Passes test suites
e86968e [Cheng Lian] Removes debugging code
8bcace5 [Cheng Lian] Replaces digit.+ to rep1(digit) (Scala style checking doesn't like it)
d15d54f [Cheng Lian] Unifies SQL and HiveQL parsers
2014-10-09 18:25:06 -07:00
ravipesala ac30205287 [SPARK-3813][SQL] Support "case when" conditional functions in Spark SQL.
"case when" conditional function is already supported in Spark SQL but there is no support in SqlParser. So added parser support to it.

Author : ravipesala ravindra.pesalahuawei.com

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #2678 from ravipesala/SPARK-3813 and squashes the following commits:

70c75a7 [ravipesala] Fixed styles
713ea84 [ravipesala] Updated as per admin comments
709684f [ravipesala] Changed parser to support case when function.
2014-10-09 15:14:58 -07:00
Nathan Howell bc3b6cb061 [SPARK-3858][SQL] Pass the generator alias into logical plan node
The alias parameter is being ignored, which makes it more difficult to specify a qualifier for Generator expressions.

Author: Nathan Howell <nhowell@godaddy.com>

Closes #2721 from NathanHowell/SPARK-3858 and squashes the following commits:

8aa0f43 [Nathan Howell] [SPARK-3858][SQL] Pass the generator alias into logical plan node
2014-10-09 15:03:01 -07:00
Yin Huai 1c7f0ab302 [SPARK-3339][SQL] Support for skipping json lines that fail to parse
This PR aims to provide a way to skip/query corrupt JSON records. To do so, we introduce an internal column to hold corrupt records (the default name is `_corrupt_record`. This name can be changed by setting the value of `spark.sql.columnNameOfCorruptRecord`). When there is a parsing error, we will put the corrupt record in its unparsed format to the internal column. Users can skip/query this column through SQL.

* To query those corrupt records
```
-- For Hive parser
SELECT `_corrupt_record`
FROM jsonTable
WHERE `_corrupt_record` IS NOT NULL
-- For our SQL parser
SELECT _corrupt_record
FROM jsonTable
WHERE _corrupt_record IS NOT NULL
```
* To skip corrupt records and query regular records
```
-- For Hive parser
SELECT field1, field2
FROM jsonTable
WHERE `_corrupt_record` IS NULL
-- For our SQL parser
SELECT field1, field2
FROM jsonTable
WHERE _corrupt_record IS NULL
```

Generally, it is not recommended to change the name of the internal column. If the name has to be changed to avoid possible name conflicts, you can use `sqlContext.setConf(SQLConf.COLUMN_NAME_OF_CORRUPT_RECORD, <new column name>)` or `sqlContext.sql(SET spark.sql.columnNameOfCorruptRecord=<new column name>)`.

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #2680 from yhuai/corruptJsonRecord and squashes the following commits:

4c9828e [Yin Huai] Merge remote-tracking branch 'upstream/master' into corruptJsonRecord
309616a [Yin Huai] Change the default name of corrupt record to "_corrupt_record".
b4a3632 [Yin Huai] Merge remote-tracking branch 'upstream/master' into corruptJsonRecord
9375ae9 [Yin Huai] Set the column name of corrupt json record back to the default one after the unit test.
ee584c0 [Yin Huai] Provide a way to query corrupt json records as unparsed strings.
2014-10-09 14:57:27 -07:00
Mike Timper ec4d40e481 [SPARK-3853][SQL] JSON Schema support for Timestamp fields
In JSONRDD.scala, add 'case TimestampType' in the enforceCorrectType function and a toTimestamp function.

Author: Mike Timper <mike@aurorafeint.com>

Closes #2720 from mtimper/master and squashes the following commits:

9386ab8 [Mike Timper] Fix and tests for SPARK-3853
2014-10-09 14:02:27 -07:00
Reynold Xin bcb1ae049b [SPARK-3857] Create joins package for various join operators.
Author: Reynold Xin <rxin@apache.org>

Closes #2719 from rxin/sql-join-break and squashes the following commits:

0c0082b [Reynold Xin] Fix line length.
cbc664c [Reynold Xin] Rename join -> joins package.
a070d44 [Reynold Xin] Fix line length in HashJoin
a39be8c [Reynold Xin] [SPARK-3857] Create a join package for various join operators.
2014-10-08 18:17:01 -07:00
Cheng Lian a42cc08d21 [SPARK-3713][SQL] Uses JSON to serialize DataType objects
This PR uses JSON instead of `toString` to serialize `DataType`s. The latter is not only hard to parse but also flaky in many cases.

Since we already write schema information to Parquet metadata in the old style, we have to reserve the old `DataType` parser and ensure downward compatibility. The old parser is now renamed to `CaseClassStringParser` and moved into `object DataType`.

JoshRosen davies Please help review PySpark related changes, thanks!

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2563 from liancheng/datatype-to-json and squashes the following commits:

fc92eb3 [Cheng Lian] Reverts debugging code, simplifies primitive type JSON representation
438c75f [Cheng Lian] Refactors PySpark DataType JSON SerDe per comments
6b6387b [Cheng Lian] Removes debugging code
6a3ee3a [Cheng Lian] Addresses per review comments
dc158b5 [Cheng Lian] Addresses PEP8 issues
99ab4ee [Cheng Lian] Adds compatibility est case for Parquet type conversion
a983a6c [Cheng Lian] Adds PySpark support
f608c6e [Cheng Lian] De/serializes DataType objects from/to JSON
2014-10-08 17:04:49 -07:00
Kousuke Saruta a85f24accd [SPARK-3831] [SQL] Filter rule Improvement and bool expression optimization.
If we write the filter which is always FALSE like

    SELECT * from person WHERE FALSE;

200 tasks will run. I think, 1 task is enough.

And current optimizer cannot optimize the case NOT is duplicated like

    SELECT * from person WHERE NOT ( NOT (age > 30));

The filter rule above should be simplified

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #2692 from sarutak/SPARK-3831 and squashes the following commits:

25f3e20 [Kousuke Saruta] Merge branch 'master' of git://git.apache.org/spark into SPARK-3831
23c750c [Kousuke Saruta] Improved unsupported predicate test case
a11b9f3 [Kousuke Saruta] Modified NOT predicate test case in PartitionBatchPruningSuite
8ea872b [Kousuke Saruta] Fixed the number of tasks when the data of  LocalRelation is empty.
2014-10-08 17:03:47 -07:00
Cheng Lian 34b97a067d [SPARK-3645][SQL] Makes table caching eager by default and adds syntax for lazy caching
Although lazy caching for in-memory table seems consistent with the `RDD.cache()` API, it's relatively confusing for users who mainly work with SQL and not familiar with Spark internals. The `CACHE TABLE t; SELECT COUNT(*) FROM t;` pattern is also commonly seen just to ensure predictable performance.

This PR makes both the `CACHE TABLE t [AS SELECT ...]` statement and the `SQLContext.cacheTable()` API eager by default, and adds a new `CACHE LAZY TABLE t [AS SELECT ...]` syntax to provide lazy in-memory table caching.

Also, took the chance to make some refactoring: `CacheCommand` and `CacheTableAsSelectCommand` are now merged and renamed to `CacheTableCommand` since the former is strictly a special case of the latter. A new `UncacheTableCommand` is added for the `UNCACHE TABLE t` statement.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2513 from liancheng/eager-caching and squashes the following commits:

fe92287 [Cheng Lian] Makes table caching eager by default and adds syntax for lazy caching
2014-10-05 17:51:59 -07:00
Michael Armbrust 6a1d48f4f0 [SPARK-3212][SQL] Use logical plan matching instead of temporary tables for table caching
_Also addresses: SPARK-1671, SPARK-1379 and SPARK-3641_

This PR introduces a new trait, `CacheManger`, which replaces the previous temporary table based caching system.  Instead of creating a temporary table that shadows an existing table with and equivalent cached representation, the cached manager maintains a separate list of logical plans and their cached data.  After optimization, this list is searched for any matching plan fragments.  When a matching plan fragment is found it is replaced with the cached data.

There are several advantages to this approach:
 - Calling .cache() on a SchemaRDD now works as you would expect, and uses the more efficient columnar representation.
 - Its now possible to provide a list of temporary tables, without having to decide if a given table is actually just a  cached persistent table. (To be done in a follow-up PR)
 - In some cases it is possible that cached data will be used, even if a cached table was not explicitly requested.  This is because we now look at the logical structure instead of the table name.
 - We now correctly invalidate when data is inserted into a hive table.

Author: Michael Armbrust <michael@databricks.com>

Closes #2501 from marmbrus/caching and squashes the following commits:

63fbc2c [Michael Armbrust] Merge remote-tracking branch 'origin/master' into caching.
0ea889e [Michael Armbrust] Address comments.
1e23287 [Michael Armbrust] Add support for cache invalidation for hive inserts.
65ed04a [Michael Armbrust] fix tests.
bdf9a3f [Michael Armbrust] Merge remote-tracking branch 'origin/master' into caching
b4b77f2 [Michael Armbrust] Address comments
6923c9d [Michael Armbrust] More comments / tests
80f26ac [Michael Armbrust] First draft of improved semantics for Spark SQL caching.
2014-10-03 12:34:27 -07:00
ravipesala bbdf1de84f [SPARK-3371][SQL] Renaming a function expression with group by gives error
The following code gives error.
```
sqlContext.registerFunction("len", (s: String) => s.length)
sqlContext.sql("select len(foo) as a, count(1) from t1 group by len(foo)").collect()
```
Because SQl parser creates the aliases to the functions in grouping expressions with generated alias names. So if user gives the alias names to the functions inside projection then it does not match the generated alias name of grouping expression.
This kind of queries are working in Hive.
So the fix I have given that if user provides alias to the function in projection then don't generate alias in grouping expression,use the same alias.

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #2511 from ravipesala/SPARK-3371 and squashes the following commits:

9fb973f [ravipesala] Removed aliases to grouping expressions.
f8ace79 [ravipesala] Fixed the testcase issue
bad2fd0 [ravipesala] SPARK-3371 : Fixed Renaming a function expression with group by gives error
2014-10-01 23:53:21 -07:00
Venkata Ramana Gollamudi f84b228c40 [SPARK-3593][SQL] Add support for sorting BinaryType
BinaryType is derived from NativeType and added Ordering support.

Author: Venkata Ramana G <ramana.gollamudihuawei.com>

Author: Venkata Ramana Gollamudi <ramana.gollamudi@huawei.com>

Closes #2617 from gvramana/binarytype_sort and squashes the following commits:

1cf26f3 [Venkata Ramana Gollamudi] Supported Sorting of BinaryType
2014-10-01 15:57:09 -07:00
Reynold Xin 3888ee2f38 [SPARK-3748] Log thread name in unit test logs
Thread names are useful for correlating failures.

Author: Reynold Xin <rxin@apache.org>

Closes #2600 from rxin/log4j and squashes the following commits:

83ffe88 [Reynold Xin] [SPARK-3748] Log thread name in unit test logs
2014-10-01 01:03:49 -07:00
Michael Armbrust a08153f8a3 [SPARK-3646][SQL] Copy SQL configuration from SparkConf when a SQLContext is created.
This will allow us to take advantage of things like the spark.defaults file.

Author: Michael Armbrust <michael@databricks.com>

Closes #2493 from marmbrus/copySparkConf and squashes the following commits:

0bd1377 [Michael Armbrust] Copy SQL configuration from SparkConf when a SQLContext is created.
2014-09-23 12:27:12 -07:00
ravipesala 3b8eefa9b8 [SPARK-3536][SQL] SELECT on empty parquet table throws exception
It returns null metadata from parquet if querying on empty parquet file while calculating splits.So added null check and returns the empty splits.

Author : ravipesala ravindra.pesalahuawei.com

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #2456 from ravipesala/SPARK-3536 and squashes the following commits:

1e81a50 [ravipesala] Fixed the issue when querying on empty parquet file.
2014-09-23 11:52:13 -07:00
Michael Armbrust 293ce85145 [SPARK-3414][SQL] Replace LowerCaseSchema with Resolver
**This PR introduces a subtle change in semantics for HiveContext when using the results in Python or Scala.  Specifically, while resolution remains case insensitive, it is now case preserving.**

_This PR is a follow up to #2293 (and to a lesser extent #2262 #2334)._

In #2293 the catalog was changed to store analyzed logical plans instead of unresolved ones.  While this change fixed the reported bug (which was caused by yet another instance of us forgetting to put in a `LowerCaseSchema` operator) it had the consequence of breaking assumptions made by `MultiInstanceRelation`.  Specifically, we can't replace swap out leaf operators in a tree without rewriting changed expression ids (which happens when you self join the same RDD that has been registered as a temp table).

In this PR, I instead remove the need to insert `LowerCaseSchema` operators at all, by moving the concern of matching up identifiers completely into analysis.  Doing so allows the test cases from both #2293 and #2262 to pass at the same time (and likely fixes a slew of other "unknown unknown" bugs).

While it is rolled back in this PR, storing the analyzed plan might actually be a good idea.  For instance, it is kind of confusing if you register a temporary table, change the case sensitivity of resolution and now you can't query that table anymore.  This can be addressed in a follow up PR.

Follow-ups:
 - Configurable case sensitivity
 - Consider storing analyzed plans for temp tables

Author: Michael Armbrust <michael@databricks.com>

Closes #2382 from marmbrus/lowercase and squashes the following commits:

c21171e [Michael Armbrust] Ensure the resolver is used for field lookups and ensure that case insensitive resolution is still case preserving.
d4320f1 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into lowercase
2de881e [Michael Armbrust] Address comments.
219805a [Michael Armbrust] style
5b93711 [Michael Armbrust] Replace LowerCaseSchema with Resolver.
2014-09-20 16:41:14 -07:00
Cheng Lian 7f54580c45 [SPARK-3609][SQL] Adds sizeInBytes statistics for Limit operator when all output attributes are of native data types
This helps to replace shuffled hash joins with broadcast hash joins in some cases.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2468 from liancheng/more-stats and squashes the following commits:

32687dc [Cheng Lian] Moved the test case to PlannerSuite
5595a91 [Cheng Lian] Removes debugging code
73faf69 [Cheng Lian] Test case for auto choosing broadcast hash join
f30fe1d [Cheng Lian] Adds sizeInBytes estimation for Limit when all output types are native types
2014-09-20 16:30:49 -07:00
ravipesala 5522151eb1 [SPARK-2594][SQL] Support CACHE TABLE <name> AS SELECT ...
This feature allows user to add cache table from the select query.
Example : ```CACHE TABLE testCacheTable AS SELECT * FROM TEST_TABLE```
Spark takes this type of SQL as command and it does lazy caching just like ```SQLContext.cacheTable```, ```CACHE TABLE <name>``` does.
It can be executed from both SQLContext and HiveContext.

Recreated the pull request after rebasing with master.And fixed all the comments raised in previous pull requests.
https://github.com/apache/spark/pull/2381
https://github.com/apache/spark/pull/2390

Author : ravipesala ravindra.pesalahuawei.com

Author: ravipesala <ravindra.pesala@huawei.com>

Closes #2397 from ravipesala/SPARK-2594 and squashes the following commits:

a5f0beb [ravipesala] Simplified the code as per Admin comment.
8059cd2 [ravipesala] Changed the behaviour from eager caching to lazy caching.
d6e469d [ravipesala] Code review comments by Admin are handled.
c18aa38 [ravipesala] Merge remote-tracking branch 'remotes/ravipesala/Add-Cache-table-as' into SPARK-2594
394d5ca [ravipesala] Changed style
fb1759b [ravipesala] Updated as per Admin comments
8c9993c [ravipesala] Changed the style
d8b37b2 [ravipesala] Updated as per the comments by Admin
bc0bffc [ravipesala] Merge remote-tracking branch 'ravipesala/Add-Cache-table-as' into Add-Cache-table-as
e3265d0 [ravipesala] Updated the code as per the comments by Admin in pull request.
724b9db [ravipesala] Changed style
aaf5b59 [ravipesala] Added comment
dc33895 [ravipesala] Updated parser to support add cache table command
b5276b2 [ravipesala] Updated parser to support add cache table command
eebc0c1 [ravipesala] Add CACHE TABLE <name> AS SELECT ...
6758f80 [ravipesala] Changed style
7459ce3 [ravipesala] Added comment
13c8e27 [ravipesala] Updated parser to support add cache table command
4e858d8 [ravipesala] Updated parser to support add cache table command
b803fc8 [ravipesala] Add CACHE TABLE <name> AS SELECT ...
2014-09-19 15:31:57 -07:00
Yin Huai 7583699873 [SPARK-3308][SQL] Ability to read JSON Arrays as tables
This PR aims to support reading top level JSON arrays and take every element in such an array as a row (an empty array will not generate a row).

JIRA: https://issues.apache.org/jira/browse/SPARK-3308

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #2400 from yhuai/SPARK-3308 and squashes the following commits:

990077a [Yin Huai] Handle top level JSON arrays.
2014-09-16 11:40:28 -07:00
Michael Armbrust 0f8c4edf4e [SQL] Decrease partitions when testing
Author: Michael Armbrust <michael@databricks.com>

Closes #2164 from marmbrus/shufflePartitions and squashes the following commits:

0da1e8c [Michael Armbrust] test hax
ef2d985 [Michael Armbrust] more test hacks.
2dabae3 [Michael Armbrust] more test fixes
0bdbf21 [Michael Armbrust] Make parquet tests less order dependent
b42eeab [Michael Armbrust] increase test parallelism
80453d5 [Michael Armbrust] Decrease partitions when testing
2014-09-13 16:08:04 -07:00
Cheng Lian 74049249ab [SPARK-3294][SQL] Eliminates boxing costs from in-memory columnar storage
This is a major refactoring of the in-memory columnar storage implementation, aims to eliminate boxing costs from critical paths (building/accessing column buffers) as much as possible. The basic idea is to refactor all major interfaces into a row-based form and use them together with `SpecificMutableRow`. The difficult part is how to adapt all compression schemes, esp. `RunLengthEncoding` and `DictionaryEncoding`, to this design. Since in-memory compression is disabled by default for now, and this PR should be strictly better than before no matter in-memory compression is enabled or not, maybe I'll finish that part in another PR.

**UPDATE** This PR also took the chance to optimize `HiveTableScan` by

1. leveraging `SpecificMutableRow` to avoid boxing cost, and
1. building specific `Writable` unwrapper functions a head of time to avoid per row pattern matching and branching costs.

TODO

- [x] Benchmark
- [ ] ~~Eliminate boxing costs in `RunLengthEncoding`~~ (left to future PRs)
- [ ] ~~Eliminate boxing costs in `DictionaryEncoding` (seems not easy to do without specializing `DictionaryEncoding` for every supported column type)~~  (left to future PRs)

## Micro benchmark

The benchmark uses a 10 million line CSV table consists of bytes, shorts, integers, longs, floats and doubles, measures the time to build the in-memory version of this table, and the time to scan the whole in-memory table.

Benchmark code can be found [here](https://gist.github.com/liancheng/fe70a148de82e77bd2c8#file-hivetablescanbenchmark-scala). Script used to generate the input table can be found [here](https://gist.github.com/liancheng/fe70a148de82e77bd2c8#file-tablegen-scala).

Speedup:

- Hive table scanning + column buffer building: **18.74%**

  The original benchmark uses 1K as in-memory batch size, when increased to 10K, it can be 28.32% faster.

- In-memory table scanning: **7.95%**

Before:

        | Building | Scanning
------- | -------- | --------
1       | 16472    | 525
2       | 16168    | 530
3       | 16386    | 529
4       | 16184    | 538
5       | 16209    | 521
Average | 16283.8  | 528.6

After:

        | Building | Scanning
------- | -------- | --------
1       | 13124    | 458
2       | 13260    | 529
3       | 12981    | 463
4       | 13214    | 483
5       | 13583    | 500
Average | 13232.4  | 486.6

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2327 from liancheng/prevent-boxing/unboxing and squashes the following commits:

4419fe4 [Cheng Lian] Addressing comments
e5d2cf2 [Cheng Lian] Bug fix: should call setNullAt when field value is null to avoid NPE
8b8552b [Cheng Lian] Only checks for partition batch pruning flag once
489f97b [Cheng Lian] Bug fix: TableReader.fillObject uses wrong ordinals
97bbc4e [Cheng Lian] Optimizes hive.TableReader by by providing specific Writable unwrappers a head of time
3dc1f94 [Cheng Lian] Minor changes to eliminate row object creation
5b39cb9 [Cheng Lian] Lowers log level of compression scheme details
f2a7890 [Cheng Lian] Use SpecificMutableRow in InMemoryColumnarTableScan to avoid boxing
9cf30b0 [Cheng Lian] Added row based ColumnType.append/extract
456c366 [Cheng Lian] Made compression decoder row based
edac3cd [Cheng Lian] Makes ColumnAccessor.extractSingle row based
8216936 [Cheng Lian] Removes boxing cost in IntDelta and LongDelta by providing specialized implementations
b70d519 [Cheng Lian] Made some in-memory columnar storage interfaces row-based
2014-09-13 15:08:30 -07:00
Yin Huai 4bc9e046cb [SPARK-3390][SQL] sqlContext.jsonRDD fails on a complex structure of JSON array and JSON object nesting
This PR aims to correctly handle JSON arrays in the type of `ArrayType(...(ArrayType(StructType)))`.

JIRA: https://issues.apache.org/jira/browse/SPARK-3390.

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #2364 from yhuai/SPARK-3390 and squashes the following commits:

46db418 [Yin Huai] Handle JSON arrays in the type of ArrayType(...(ArrayType(StructType))).
2014-09-11 15:23:33 -07:00
Aaron Staple c27718f376 [SPARK-2781][SQL] Check resolution of LogicalPlans in Analyzer.
LogicalPlan contains a ‘resolved’ attribute indicating that all of its execution requirements have been resolved. This attribute is not checked before query execution. The analyzer contains a step to check that all Expressions are resolved, but this is not equivalent to checking all LogicalPlans. In particular, the Union plan’s implementation of ‘resolved’ verifies that the types of its children’s columns are compatible. Because the analyzer does not check that a Union plan is resolved, it is possible to execute a Union plan that outputs different types in the same column.  See SPARK-2781 for an example.

This patch adds two checks to the analyzer’s CheckResolution rule. First, each logical plan is checked to see if it is not resolved despite its children being resolved. This allows the ‘problem’ unresolved plan to be included in the TreeNodeException for reporting. Then as a backstop the root plan is checked to see if it is resolved, which recursively checks that the entire plan tree is resolved. Note that the resolved attribute is implemented recursively, and this patch also explicitly checks the resolved attribute on each logical plan in the tree. I assume the query plan trees will not be large enough for this redundant checking to meaningfully impact performance.

Because this patch starts validating that LogicalPlans are resolved before execution, I had to fix some cases where unresolved plans were passing through the analyzer as part of the implementation of the hive query system. In particular, HiveContext applies the CreateTables and PreInsertionCasts, and ExtractPythonUdfs rules manually after the analyzer runs. I moved these rules to the analyzer stage (for hive queries only), in the process completing a code TODO indicating the rules should be moved to the analyzer.

It’s worth noting that moving the CreateTables rule means introducing an analyzer rule with a significant side effect - in this case the side effect is creating a hive table. The rule will only attempt to create a table once even if its batch is executed multiple times, because it converts the InsertIntoCreatedTable plan it matches against into an InsertIntoTable. Additionally, these hive rules must be added to the Resolution batch rather than as a separate batch because hive rules rules may be needed to resolve non-root nodes, leaving the root to be resolved on a subsequent batch iteration. For example, the hive compatibility test auto_smb_mapjoin_14, and others, make use of a query plan where the root is a Union and its children are each a hive InsertIntoTable.

Mixing the custom hive rules with standard analyzer rules initially resulted in an additional failure because of policy differences between spark sql and hive when casting a boolean to a string. Hive casts booleans to strings as “true” / “false” while spark sql casts booleans to strings as “1” / “0” (causing the cast1.q test to fail). This behavior is a result of the BooleanCasts rule in HiveTypeCoercion.scala, and from looking at the implementation of BooleanCasts I think converting to to “1”/“0” is potentially a programming mistake. (If the BooleanCasts rule is disabled, casting produces “true”/“false” instead.) I believe “true” / “false” should be the behavior for spark sql - I changed the behavior so bools are converted to “true”/“false” to be consistent with hive, and none of the existing spark tests failed.

Finally, in some initial testing with hive it appears that an implicit type coercion of boolean to string results in a lowercase string, e.g. CONCAT( TRUE, “” ) -> “true” while an explicit cast produces an all caps string, e.g. CAST( TRUE AS STRING ) -> “TRUE”.  The change I’ve made just converts to lowercase strings in all cases.  I believe it is at least more correct than the existing spark sql implementation where all Cast expressions become “1” / “0”.

Author: Aaron Staple <aaron.staple@gmail.com>

Closes #1706 from staple/SPARK-2781 and squashes the following commits:

32683c4 [Aaron Staple] Fix compilation failure due to merge.
7c77fda [Aaron Staple] Move ExtractPythonUdfs to Analyzer's extendedRules in HiveContext.
d49bfb3 [Aaron Staple] Address review comments.
915b690 [Aaron Staple] Fix merge issue causing compilation failure.
701dcd2 [Aaron Staple] [SPARK-2781][SQL] Check resolution of LogicalPlans in Analyzer.
2014-09-10 21:01:53 -07:00
Wenchen Fan e4f4886d71 [SPARK-2096][SQL] Correctly parse dot notations
First let me write down the current `projections` grammar of spark sql:

    expression                : orExpression
    orExpression              : andExpression {"or" andExpression}
    andExpression             : comparisonExpression {"and" comparisonExpression}
    comparisonExpression      : termExpression | termExpression "=" termExpression | termExpression ">" termExpression | ...
    termExpression            : productExpression {"+"|"-" productExpression}
    productExpression         : baseExpression {"*"|"/"|"%" baseExpression}
    baseExpression            : expression "[" expression "]" | ... | ident | ...
    ident                     : identChar {identChar | digit} | delimiters | ...
    identChar                 : letter | "_" | "."
    delimiters                : "," | ";" | "(" | ")" | "[" | "]" | ...
    projection                : expression [["AS"] ident]
    projections               : projection { "," projection}

For something like `a.b.c[1]`, it will be parsed as:
<img src="http://img51.imgspice.com/i/03008/4iltjsnqgmtt_t.jpg" border=0>
But for something like `a[1].b`, the current grammar can't parse it correctly.
A simple solution is written in `ParquetQuerySuite#NestedSqlParser`, changed grammars are:

    delimiters                : "." | "," | ";" | "(" | ")" | "[" | "]" | ...
    identChar                 : letter | "_"
    baseExpression            : expression "[" expression "]" | expression "." ident | ... | ident | ...
This works well, but can't cover some corner case like `select t.a.b from table as t`:
<img src="http://img51.imgspice.com/i/03008/v2iau3hoxoxg_t.jpg" border=0>
`t.a.b` parsed as `GetField(GetField(UnResolved("t"), "a"), "b")` instead of `GetField(UnResolved("t.a"), "b")` using this new grammar.
However, we can't resolve `t` as it's not a filed, but the whole table.(if we could do this, then `select t from table as t` is legal, which is unexpected)
My solution is:

    dotExpressionHeader       : ident "." ident
    baseExpression            : expression "[" expression "]" | expression "." ident | ... | dotExpressionHeader  | ident | ...
I passed all test cases under sql locally and add a more complex case.
"arrayOfStruct.field1 to access all values of field1" is not supported yet. Since this PR has changed a lot of code, I will open another PR for it.
I'm not familiar with the latter optimize phase, please correct me if I missed something.

Author: Wenchen Fan <cloud0fan@163.com>
Author: Michael Armbrust <michael@databricks.com>

Closes #2230 from cloud-fan/dot and squashes the following commits:

e1a8898 [Wenchen Fan] remove support for arbitrary nested arrays
ee8a724 [Wenchen Fan] rollback LogicalPlan, support dot operation on nested array type
a58df40 [Michael Armbrust] add regression test for doubly nested data
16bc4c6 [Wenchen Fan] some enhance
95d733f [Wenchen Fan] split long line
dc31698 [Wenchen Fan] SPARK-2096 Correctly parse dot notations
2014-09-10 12:56:59 -07:00
Eric Liang b734ed0c22 [SPARK-3395] [SQL] DSL sometimes incorrectly reuses attribute ids, breaking queries
This resolves https://issues.apache.org/jira/browse/SPARK-3395

Author: Eric Liang <ekl@google.com>

Closes #2266 from ericl/spark-3395 and squashes the following commits:

7f2b6f0 [Eric Liang] add regression test
05bd1e4 [Eric Liang] in the dsl, create a new schema instance in each applySchema
2014-09-09 23:47:12 -07:00
Cheng Lian c110614b33 [SPARK-3448][SQL] Check for null in SpecificMutableRow.update
`SpecificMutableRow.update` doesn't check for null, and breaks existing `MutableRow` contract.

The tricky part here is that for performance considerations, the `update` method of all subclasses of `MutableValue` doesn't check for null and sets the null bit to false.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2325 from liancheng/check-for-null and squashes the following commits:

9366c44 [Cheng Lian] Check for null in SpecificMutableRow.update
2014-09-09 18:39:33 -07:00
xinyunh 07ee4a28c3 [SPARK-3176] Implement 'ABS and 'LAST' for sql
Add support for the mathematical function"ABS" and the analytic function "last" to return a subset of the rows satisfying a query within spark sql. Test-cases included.

Author: xinyunh <xinyun.huang@huawei.com>
Author: bomeng <golf8lover>

Closes #2099 from xinyunh/sqlTest and squashes the following commits:

71d15e7 [xinyunh] remove POWER part
8843643 [xinyunh] fix the code style issue
39f0309 [bomeng] Modify the code of POWER and ABS. Move them to the file arithmetic
ff8e51e [bomeng] add abs() function support
7f6980a [xinyunh] fix the bug in 'Last' component
b3df91b [xinyunh] add 'Last' component
2014-09-09 16:55:39 -07:00
Cheng Hao 1e03cf79f8 [SPARK-3455] [SQL] **HOT FIX** Fix the unit test failure
Unit test failed due to can not resolve the attribute references. Temporally disable this test case for a quick fixing, otherwise it will block the others.

Author: Cheng Hao <hao.cheng@intel.com>

Closes #2334 from chenghao-intel/unit_test_failure and squashes the following commits:

661f784 [Cheng Hao] temporally disable the failed test case
2014-09-09 10:18:25 -07:00
William Benton ca0348e682 SPARK-3423: [SQL] Implement BETWEEN for SQLParser
This patch improves the SQLParser by adding support for BETWEEN conditions

Author: William Benton <willb@redhat.com>

Closes #2295 from willb/sql-between and squashes the following commits:

0016d30 [William Benton] Implement BETWEEN for SQLParser
2014-09-08 19:05:02 -07:00
Eric Liang 7db53391f1 [SPARK-3349][SQL] Output partitioning of limit should not be inherited from child
This resolves https://issues.apache.org/jira/browse/SPARK-3349

Author: Eric Liang <ekl@google.com>

Closes #2262 from ericl/spark-3349 and squashes the following commits:

3e1b05c [Eric Liang] add regression test
ac32723 [Eric Liang] make limit/takeOrdered output SinglePartition
2014-09-08 16:14:36 -07:00
Cheng Lian 248067adbe [SPARK-2961][SQL] Use statistics to prune batches within cached partitions
This PR is based on #1883 authored by marmbrus. Key differences:

1. Batch pruning instead of partition pruning

   When #1883 was authored, batched column buffer building (#1880) hadn't been introduced. This PR combines these two and provide partition batch level pruning, which leads to smaller memory footprints and can generally skip more elements. The cost is that the pruning predicates are evaluated more frequently (partition number multiplies batch number per partition).

1. More filters are supported

   Filter predicates consist of `=`, `<`, `<=`, `>`, `>=` and their conjunctions and disjunctions are supported.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2188 from liancheng/in-mem-batch-pruning and squashes the following commits:

68cf019 [Cheng Lian] Marked sqlContext as @transient
4254f6c [Cheng Lian] Enables in-memory partition pruning in PartitionBatchPruningSuite
3784105 [Cheng Lian] Overrides InMemoryColumnarTableScan.sqlContext
d2a1d66 [Cheng Lian] Disables in-memory partition pruning by default
062c315 [Cheng Lian] HiveCompatibilitySuite code cleanup
16b77bf [Cheng Lian] Fixed pruning predication conjunctions and disjunctions
16195c5 [Cheng Lian] Enabled both disjunction and conjunction
89950d0 [Cheng Lian] Worked around Scala style check
9c167f6 [Cheng Lian] Minor code cleanup
3c4d5c7 [Cheng Lian] Minor code cleanup
ea59ee5 [Cheng Lian] Renamed PartitionSkippingSuite to PartitionBatchPruningSuite
fc517d0 [Cheng Lian] More test cases
1868c18 [Cheng Lian] Code cleanup, bugfix, and adding tests
cb76da4 [Cheng Lian] Added more predicate filters, fixed table scan stats for testing purposes
385474a [Cheng Lian] Merge branch 'inMemStats' into in-mem-batch-pruning
2014-09-03 18:59:26 -07:00
Cheng Lian 32b18dd52c [SPARK-3320][SQL] Made batched in-memory column buffer building work for SchemaRDDs with empty partitions
Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #2213 from liancheng/spark-3320 and squashes the following commits:

45a0139 [Cheng Lian] Fixed typo in InMemoryColumnarQuerySuite
f67067d [Cheng Lian] Fixed SPARK-3320
2014-08-29 18:16:47 -07:00
Zdenek Farana 98ddbe6cdb [SPARK-3173][SQL] Timestamp support in the parser
If you have a table with TIMESTAMP column, that column can't be used in WHERE clause properly - it is not evaluated properly. [More](https://issues.apache.org/jira/browse/SPARK-3173)

Motivation: http://www.aproint.com/aggregation-with-spark-sql/

- [x] modify SqlParser so it supports casting to TIMESTAMP (workaround for item 2)
- [x] the string literal should be converted into Timestamp if the column is Timestamp.

Author: Zdenek Farana <zdenek.farana@gmail.com>
Author: Zdenek Farana <zdenek.farana@aproint.com>

Closes #2084 from byF/SPARK-3173 and squashes the following commits:

442b59d [Zdenek Farana] Fixed test merge conflict
2dbf4f6 [Zdenek Farana] Merge remote-tracking branch 'origin/SPARK-3173' into SPARK-3173
65b6215 [Zdenek Farana] Fixed timezone sensitivity in the test
47b27b4 [Zdenek Farana] Now works in the case of "StringLiteral=TimestampColumn"
96a661b [Zdenek Farana] Code style change
491dfcf [Zdenek Farana] Added test cases for SPARK-3173
4446b1e [Zdenek Farana] A string literal is casted into Timestamp when the column is Timestamp.
59af397 [Zdenek Farana] Added a new TIMESTAMP keyword; CAST to TIMESTAMP now can be used in SQL expression.
2014-08-29 15:39:15 -07:00
William Benton 2f1519defa SPARK-2813: [SQL] Implement SQRT() directly in Spark SQL
This PR adds a native implementation for SQL SQRT() and thus avoids delegating this function to Hive.

Author: William Benton <willb@redhat.com>

Closes #1750 from willb/spark-2813 and squashes the following commits:

22c8a79 [William Benton] Fixed missed newline from rebase
d673861 [William Benton] Added string coercions for SQRT and associated test case
e125df4 [William Benton] Added ExpressionEvaluationSuite test cases for SQRT
7b84bcd [William Benton] SQL SQRT now properly returns NULL for NULL inputs
8256971 [William Benton] added SQRT test to SqlQuerySuite
504d2e5 [William Benton] Added native SQRT implementation
2014-08-29 15:26:59 -07:00
Michael Armbrust 76e3ba4264 [SPARK-3230][SQL] Fix udfs that return structs
We need to convert the case classes into Rows.

Author: Michael Armbrust <michael@databricks.com>

Closes #2133 from marmbrus/structUdfs and squashes the following commits:

189722f [Michael Armbrust] Merge remote-tracking branch 'origin/master' into structUdfs
8e29b1c [Michael Armbrust] Use existing function
d8d0b76 [Michael Armbrust] Fix udfs that return structs
2014-08-28 00:15:23 -07:00
Michael Armbrust 7d2a7a91f2 [SPARK-3235][SQL] Ensure in-memory tables don't always broadcast.
Author: Michael Armbrust <michael@databricks.com>

Closes #2147 from marmbrus/inMemDefaultSize and squashes the following commits:

5390360 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into inMemDefaultSize
14204d3 [Michael Armbrust] Set the context before creating SparkLogicalPlans.
8da4414 [Michael Armbrust] Make sure we throw errors when leaf nodes fail to provide statistcs
18ce029 [Michael Armbrust] Ensure in-memory tables don't always broadcast.
2014-08-27 15:14:08 -07:00
chutium 48f42781de [SPARK-3138][SQL] sqlContext.parquetFile should be able to take a single file as parameter
```if (!fs.getFileStatus(path).isDir) throw Exception``` make no sense after this commit #1370

be careful if someone is working on SPARK-2551, make sure the new change passes test case ```test("Read a parquet file instead of a directory")```

Author: chutium <teng.qiu@gmail.com>

Closes #2044 from chutium/parquet-singlefile and squashes the following commits:

4ae477f [chutium] [SPARK-3138][SQL] sqlContext.parquetFile should be able to take a single file as parameter
2014-08-27 13:13:04 -07:00
Takuya UESHIN 727cb25bcc [SPARK-3036][SPARK-3037][SQL] Add MapType/ArrayType containing null value support to Parquet.
JIRA:
- https://issues.apache.org/jira/browse/SPARK-3036
- https://issues.apache.org/jira/browse/SPARK-3037

Currently this uses the following Parquet schema for `MapType` when `valueContainsNull` is `true`:

```
message root {
  optional group a (MAP) {
    repeated group map (MAP_KEY_VALUE) {
      required int32 key;
      optional int32 value;
    }
  }
}
```

for `ArrayType` when `containsNull` is `true`:

```
message root {
  optional group a (LIST) {
    repeated group bag {
      optional int32 array;
    }
  }
}
```

We have to think about compatibilities with older version of Spark or Hive or others I mentioned in the JIRA issues.

Notice:
This PR is based on #1963 and #1889.
Please check them first.

/cc marmbrus, yhuai

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #2032 from ueshin/issues/SPARK-3036_3037 and squashes the following commits:

4e8e9e7 [Takuya UESHIN] Add ArrayType containing null value support to Parquet.
013c2ca [Takuya UESHIN] Add MapType containing null value support to Parquet.
62989de [Takuya UESHIN] Merge branch 'issues/SPARK-2969' into issues/SPARK-3036_3037
8e38b53 [Takuya UESHIN] Merge branch 'issues/SPARK-3063' into issues/SPARK-3036_3037
2014-08-26 18:28:41 -07:00
Takuya UESHIN 6b5584ef1c [SPARK-3063][SQL] ExistingRdd should convert Map to catalyst Map.
Currently `ExistingRdd.convertToCatalyst` doesn't convert `Map` value.

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #1963 from ueshin/issues/SPARK-3063 and squashes the following commits:

3ba41f2 [Takuya UESHIN] Merge branch 'master' into issues/SPARK-3063
4d7bae2 [Takuya UESHIN] Merge branch 'master' into issues/SPARK-3063
9321379 [Takuya UESHIN] Merge branch 'master' into issues/SPARK-3063
d8a900a [Takuya UESHIN] Make ExistingRdd.convertToCatalyst be able to convert Map value.
2014-08-26 15:04:08 -07:00
Takuya UESHIN 98c2bb0bbd [SPARK-2969][SQL] Make ScalaReflection be able to handle ArrayType.containsNull and MapType.valueContainsNull.
Make `ScalaReflection` be able to handle like:

- `Seq[Int]` as `ArrayType(IntegerType, containsNull = false)`
- `Seq[java.lang.Integer]` as `ArrayType(IntegerType, containsNull = true)`
- `Map[Int, Long]` as `MapType(IntegerType, LongType, valueContainsNull = false)`
- `Map[Int, java.lang.Long]` as `MapType(IntegerType, LongType, valueContainsNull = true)`

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #1889 from ueshin/issues/SPARK-2969 and squashes the following commits:

24f1c5c [Takuya UESHIN] Change the default value of ArrayType.containsNull to true in Python API.
79f5b65 [Takuya UESHIN] Change the default value of ArrayType.containsNull to true in Java API.
7cd1a7a [Takuya UESHIN] Fix json test failures.
2cfb862 [Takuya UESHIN] Change the default value of ArrayType.containsNull to true.
2f38e61 [Takuya UESHIN] Revert the default value of MapTypes.valueContainsNull.
9fa02f5 [Takuya UESHIN] Fix a test failure.
1a9a96b [Takuya UESHIN] Modify ScalaReflection to handle ArrayType.containsNull and MapType.valueContainsNull.
2014-08-26 13:22:55 -07:00
chutium 8856c3d860 [SPARK-3131][SQL] Allow user to set parquet compression codec for writing ParquetFile in SQLContext
There are 4 different compression codec available for ```ParquetOutputFormat```

in Spark SQL, it was set as a hard-coded value in ```ParquetRelation.defaultCompression```

original discuss:
https://github.com/apache/spark/pull/195#discussion-diff-11002083

i added a new config property in SQLConf to allow user to change this compression codec, and i used similar short names syntax as described in SPARK-2953 #1873 (https://github.com/apache/spark/pull/1873/files#diff-0)

btw, which codec should we use as default? it was set to GZIP (https://github.com/apache/spark/pull/195/files#diff-4), but i think maybe we should change this to SNAPPY, since SNAPPY is already the default codec for shuffling in spark-core (SPARK-2469, #1415), and parquet-mr supports Snappy codec natively (e440108de5).

Author: chutium <teng.qiu@gmail.com>

Closes #2039 from chutium/parquet-compression and squashes the following commits:

2f44964 [chutium] [SPARK-3131][SQL] parquet compression default codec set to snappy, also in test suite
e578e21 [chutium] [SPARK-3131][SQL] compression codec config property name and default codec set to snappy
21235dc [chutium] [SPARK-3131][SQL] Allow user to set parquet compression codec for writing ParquetFile in SQLContext
2014-08-26 11:51:26 -07:00
Michael Armbrust 7e191fe29b [SPARK-2554][SQL] CountDistinct partial aggregation and object allocation improvements
Author: Michael Armbrust <michael@databricks.com>
Author: Gregory Owen <greowen@gmail.com>

Closes #1935 from marmbrus/countDistinctPartial and squashes the following commits:

5c7848d [Michael Armbrust] turn off caching in the constructor
8074a80 [Michael Armbrust] fix tests
32d216f [Michael Armbrust] reynolds comments
c122cca [Michael Armbrust] Address comments, add tests
b2e8ef3 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into countDistinctPartial
fae38f4 [Michael Armbrust] Fix style
fdca896 [Michael Armbrust] cleanup
93d0f64 [Michael Armbrust] metastore concurrency fix.
db44a30 [Michael Armbrust] JIT hax.
3868f6c [Michael Armbrust] Merge pull request #9 from GregOwen/countDistinctPartial
c9e67de [Gregory Owen] Made SpecificRow and types serializable by Kryo
2b46c4b [Michael Armbrust] Merge remote-tracking branch 'origin/master' into countDistinctPartial
8ff6402 [Michael Armbrust] Add specific row.
58d15f1 [Michael Armbrust] disable codegen logging
87d101d [Michael Armbrust] Fix isNullAt bug
abee26d [Michael Armbrust] WIP
27984d0 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into countDistinctPartial
57ae3b1 [Michael Armbrust] Fix order dependent test
b3d0f64 [Michael Armbrust] Add golden files.
c1f7114 [Michael Armbrust] Improve tests / fix serialization.
f31b8ad [Michael Armbrust] more fixes
38c7449 [Michael Armbrust] comments and style
9153652 [Michael Armbrust] better toString
d494598 [Michael Armbrust] Fix tests now that the planner is better
41fbd1d [Michael Armbrust] Never try and create an empty hash set.
050bb97 [Michael Armbrust] Skip no-arg constructors for kryo,
bd08239 [Michael Armbrust] WIP
213ada8 [Michael Armbrust] First draft of partially aggregated and code generated count distinct / max
2014-08-23 16:19:10 -07:00
Yin Huai add75d4831 [SPARK-2927][SQL] Add a conf to configure if we always read Binary columns stored in Parquet as String columns
This PR adds a new conf flag `spark.sql.parquet.binaryAsString`. When it is `true`, if there is no parquet metadata file available to provide the schema of the data, we will always treat binary fields stored in parquet as string fields. This conf is used to provide a way to read string fields generated without UTF8 decoration.

JIRA: https://issues.apache.org/jira/browse/SPARK-2927

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #1855 from yhuai/parquetBinaryAsString and squashes the following commits:

689ffa9 [Yin Huai] Add missing "=".
80827de [Yin Huai] Unit test.
1765ca4 [Yin Huai] Use .toBoolean.
9d3f199 [Yin Huai] Merge remote-tracking branch 'upstream/master' into parquetBinaryAsString
5d436a1 [Yin Huai] The initial support of adding a conf to treat binary columns stored in Parquet as string columns.
2014-08-14 10:46:33 -07:00
Michael Armbrust 9fde1ff5fc [SPARK-2935][SQL]Fix parquet predicate push down bug
Author: Michael Armbrust <michael@databricks.com>

Closes #1863 from marmbrus/parquetPredicates and squashes the following commits:

10ad202 [Michael Armbrust] left <=> right
f249158 [Michael Armbrust] quiet parquet tests.
802da5b [Michael Armbrust] Add test case.
eab2eda [Michael Armbrust] Fix parquet predicate push down bug
2014-08-13 17:40:59 -07:00
Michael Armbrust bad21ed085 [SPARK-2650][SQL] Build column buffers in smaller batches
Author: Michael Armbrust <michael@databricks.com>

Closes #1880 from marmbrus/columnBatches and squashes the following commits:

0649987 [Michael Armbrust] add test
4756fad [Michael Armbrust] fix compilation
2314532 [Michael Armbrust] Build column buffers in smaller batches
2014-08-11 20:21:56 -07:00
Yin Huai 0489cee6b2 [SPARK-2908] [SQL] JsonRDD.nullTypeToStringType does not convert all NullType to StringType
JIRA: https://issues.apache.org/jira/browse/SPARK-2908

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #1840 from yhuai/SPARK-2908 and squashes the following commits:

86e833e [Yin Huai] Update test.
cb11759 [Yin Huai] nullTypeToStringType should check columns with the type of array of structs.
2014-08-08 11:10:11 -07:00
Reynold Xin b70bae40eb [SQL] Tighten the visibility of various SQLConf methods and renamed setter/getters
Author: Reynold Xin <rxin@apache.org>

Closes #1794 from rxin/sql-conf and squashes the following commits:

3ac11ef [Reynold Xin] getAllConfs return an immutable Map instead of an Array.
4b19d6c [Reynold Xin] Tighten the visibility of various SQLConf methods and renamed setter/getters.
2014-08-05 22:29:19 -07:00
Cheng Lian d0ae3f3912 [SPARK-2650][SQL] Try to partially fix SPARK-2650 by adjusting initial buffer size and reducing memory allocation
JIRA issue: [SPARK-2650](https://issues.apache.org/jira/browse/SPARK-2650)

Please refer to [comments](https://issues.apache.org/jira/browse/SPARK-2650?focusedCommentId=14084397&page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel#comment-14084397) of SPARK-2650 for some other details.

This PR adjusts the initial in-memory columnar buffer size to 1MB, same as the default value of Shark's `shark.column.partitionSize.mb` property when running in local mode. Will add Shark style partition size estimation in another PR.

Also, before this PR, `NullableColumnBuilder` copies the whole buffer to add the null positions section, and then `CompressibleColumnBuilder` copies and compresses the buffer again, even if compression is disabled (`PassThrough` compression scheme is used to disable compression). In this PR the first buffer copy is eliminated to reduce memory consumption.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #1769 from liancheng/spark-2650 and squashes the following commits:

88a042e [Cheng Lian] Fixed method visibility and removed dead code
001f2e5 [Cheng Lian] Try fixing SPARK-2650 by adjusting initial buffer size and reducing memory allocation
2014-08-05 18:50:37 -07:00
Michael Armbrust 1a8043739d [SPARK-2739][SQL] Rename registerAsTable to registerTempTable
There have been user complaints that the difference between `registerAsTable` and `saveAsTable` is too subtle.  This PR addresses this by renaming `registerAsTable` to `registerTempTable`, which more clearly reflects what is happening.  `registerAsTable` remains, but will cause a deprecation warning.

Author: Michael Armbrust <michael@databricks.com>

Closes #1743 from marmbrus/registerTempTable and squashes the following commits:

d031348 [Michael Armbrust] Merge remote-tracking branch 'apache/master' into registerTempTable
4dff086 [Michael Armbrust] Fix .java files too
89a2f12 [Michael Armbrust] Merge remote-tracking branch 'apache/master' into registerTempTable
0b7b71e [Michael Armbrust] Rename registerAsTable to registerTempTable
2014-08-02 18:27:04 -07:00
Cheng Lian 866cf1f822 [SPARK-2729][SQL] Added test case for SPARK-2729
This is a follow up of #1636.

Author: Cheng Lian <lian.cs.zju@gmail.com>

Closes #1738 from liancheng/test-for-spark-2729 and squashes the following commits:

b13692a [Cheng Lian] Added test case for SPARK-2729
2014-08-02 17:12:49 -07:00
Michael Armbrust 158ad0bba9 [SPARK-2097][SQL] UDF Support
This patch adds the ability to register lambda functions written in Python, Java or Scala as UDFs for use in SQL or HiveQL.

Scala:
```scala
registerFunction("strLenScala", (_: String).length)
sql("SELECT strLenScala('test')")
```
Python:
```python
sqlCtx.registerFunction("strLenPython", lambda x: len(x), IntegerType())
sqlCtx.sql("SELECT strLenPython('test')")
```
Java:
```java
sqlContext.registerFunction("stringLengthJava", new UDF1<String, Integer>() {
  Override
  public Integer call(String str) throws Exception {
    return str.length();
  }
}, DataType.IntegerType);

sqlContext.sql("SELECT stringLengthJava('test')");
```

Author: Michael Armbrust <michael@databricks.com>

Closes #1063 from marmbrus/udfs and squashes the following commits:

9eda0fe [Michael Armbrust] newline
747c05e [Michael Armbrust] Add some scala UDF tests.
d92727d [Michael Armbrust] Merge remote-tracking branch 'apache/master' into udfs
005d684 [Michael Armbrust] Fix naming and formatting.
d14dac8 [Michael Armbrust] Fix last line of autogened java files.
8135c48 [Michael Armbrust] Move UDF unit tests to pyspark.
40b0ffd [Michael Armbrust] Merge remote-tracking branch 'apache/master' into udfs
6a36890 [Michael Armbrust] Switch logging so that SQLContext can be serializable.
7a83101 [Michael Armbrust] Drop toString
795fd15 [Michael Armbrust] Try to avoid capturing SQLContext.
e54fb45 [Michael Armbrust] Docs and tests.
437cbe3 [Michael Armbrust] Update use of dataTypes, fix some python tests, address review comments.
01517d6 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into udfs
8e6c932 [Michael Armbrust] WIP
3f96a52 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into udfs
6237c8d [Michael Armbrust] WIP
2766f0b [Michael Armbrust] Move udfs support to SQL from hive. Add support for Java UDFs.
0f7d50c [Michael Armbrust] Draft of native Spark SQL UDFs for Scala and Python.
2014-08-02 16:33:48 -07:00
GuoQiang Li 4c477117bb SPARK-2804: Remove scalalogging-slf4j dependency
This also Closes #1701.

Author: GuoQiang Li <witgo@qq.com>

Closes #1208 from witgo/SPARK-1470 and squashes the following commits:

422646b [GuoQiang Li] Remove scalalogging-slf4j dependency
2014-08-02 13:59:58 -07:00
Patrick Wendell dab37966b0 Revert "[SPARK-1470][SPARK-1842] Use the scala-logging wrapper instead of the directly sfl4j api"
This reverts commit adc8303294.
2014-08-01 23:55:30 -07:00
GuoQiang Li adc8303294 [SPARK-1470][SPARK-1842] Use the scala-logging wrapper instead of the directly sfl4j api
Author: GuoQiang Li <witgo@qq.com>

Closes #1369 from witgo/SPARK-1470_new and squashes the following commits:

66a1641 [GuoQiang Li] IncompatibleResultTypeProblem
73a89ba [GuoQiang Li] Use the scala-logging wrapper instead of the directly sfl4j api.
2014-08-01 23:55:11 -07:00
Yin Huai 3822f33f3c [SPARK-2212][SQL] Hash Outer Join (follow-up bug fix).
We need to carefully set the ouputPartitioning of the HashOuterJoin Operator. Otherwise, we may not correctly handle nulls.

Author: Yin Huai <huai@cse.ohio-state.edu>

Closes #1721 from yhuai/SPARK-2212-BugFix and squashes the following commits:

ed5eef7 [Yin Huai] Correctly choosing outputPartitioning for the HashOuterJoin operator.
2014-08-01 18:52:01 -07:00
chutium 580c7011ca [SPARK-2729] [SQL] Forgot to match Timestamp type in ColumnBuilder
just a match forgot, found after SPARK-2710 , TimestampType can be used by a SchemaRDD generated from JDBC ResultSet

Author: chutium <teng.qiu@gmail.com>

Closes #1636 from chutium/SPARK-2729 and squashes the following commits:

71af77a [chutium] [SPARK-2729] [SQL] added Timestamp in NullableColumnAccessorSuite
39cf9f8 [chutium] [SPARK-2729] add Timestamp Type into ColumnBuilder TestSuite, ref. #1636
ab6ff97 [chutium] [SPARK-2729] Forgot to match Timestamp type in ColumnBuilder
2014-08-01 11:31:44 -07:00
Cheng Hao 4415722e91 [SQL][SPARK-2212]Hash Outer Join
This patch is to support the hash based outer join. Currently, outer join for big relations are resort to `BoradcastNestedLoopJoin`, which is super slow. This PR will create 2 hash tables for both relations in the same partition, which greatly reduce the table scans.

Here is the testing code that I used:
```
package org.apache.spark.sql.hive

import org.apache.spark.SparkContext
import org.apache.spark.SparkConf
import org.apache.spark.sql._

case class Record(key: String, value: String)

object JoinTablePrepare extends App {
  import TestHive2._

  val rdd = sparkContext.parallelize((1 to 3000000).map(i => Record(s"${i % 828193}", s"val_$i")))

  runSqlHive("SHOW TABLES")
  runSqlHive("DROP TABLE if exists a")
  runSqlHive("DROP TABLE if exists b")
  runSqlHive("DROP TABLE if exists result")
  rdd.registerAsTable("records")

  runSqlHive("""CREATE TABLE a (key STRING, value STRING)
                 | ROW FORMAT SERDE
                 | 'org.apache.hadoop.hive.serde2.columnar.LazyBinaryColumnarSerDe'
                 | STORED AS RCFILE
               """.stripMargin)
  runSqlHive("""CREATE TABLE b (key STRING, value STRING)
                 | ROW FORMAT SERDE
                 | 'org.apache.hadoop.hive.serde2.columnar.LazyBinaryColumnarSerDe'
                 | STORED AS RCFILE
               """.stripMargin)
  runSqlHive("""CREATE TABLE result (key STRING, value STRING)
                 | ROW FORMAT SERDE
                 | 'org.apache.hadoop.hive.serde2.columnar.LazyBinaryColumnarSerDe'
                 | STORED AS RCFILE
               """.stripMargin)

  hql(s"""from records
             | insert into table a
             | select key, value
           """.stripMargin)
  hql(s"""from records
             | insert into table b select key + 100000, value
           """.stripMargin)
}

object JoinTablePerformanceTest extends App {
  import TestHive2._

  hql("SHOW TABLES")
  hql("set spark.sql.shuffle.partitions=20")

  val leftOuterJoin = "insert overwrite table result select a.key, b.value from a left outer join b on a.key=b.key"
  val rightOuterJoin = "insert overwrite table result select a.key, b.value from a right outer join b on a.key=b.key"
  val fullOuterJoin = "insert overwrite table result select a.key, b.value from a full outer join b on a.key=b.key"

  val results = ("LeftOuterJoin", benchmark(leftOuterJoin)) :: ("LeftOuterJoin", benchmark(leftOuterJoin)) ::
                ("RightOuterJoin", benchmark(rightOuterJoin)) :: ("RightOuterJoin", benchmark(rightOuterJoin)) ::
                ("FullOuterJoin", benchmark(fullOuterJoin)) :: ("FullOuterJoin", benchmark(fullOuterJoin)) :: Nil
  val explains = hql(s"explain $leftOuterJoin").collect ++ hql(s"explain $rightOuterJoin").collect ++ hql(s"explain $fullOuterJoin").collect
  println(explains.mkString(",\n"))
  results.foreach { case (prompt, result) => {
      println(s"$prompt: took ${result._1} ms (${result._2} records)")
    }
  }

  def benchmark(cmd: String) = {
    val begin = System.currentTimeMillis()
    val result = hql(cmd)
    val end = System.currentTimeMillis()
    val count = hql("select count(1) from result").collect.mkString("")
    ((end - begin), count)
  }
}
```
And the result as shown below:
```
[Physical execution plan:],
[InsertIntoHiveTable (MetastoreRelation default, result, None), Map(), true],
[ Project [key#95,value#98]],
[  HashOuterJoin [key#95], [key#97], LeftOuter, None],
[   Exchange (HashPartitioning [key#95], 20)],
[    HiveTableScan [key#95], (MetastoreRelation default, a, None), None],
[   Exchange (HashPartitioning [key#97], 20)],
[    HiveTableScan [key#97,value#98], (MetastoreRelation default, b, None), None],
[Physical execution plan:],
[InsertIntoHiveTable (MetastoreRelation default, result, None), Map(), true],
[ Project [key#102,value#105]],
[  HashOuterJoin [key#102], [key#104], RightOuter, None],
[   Exchange (HashPartitioning [key#102], 20)],
[    HiveTableScan [key#102], (MetastoreRelation default, a, None), None],
[   Exchange (HashPartitioning [key#104], 20)],
[    HiveTableScan [key#104,value#105], (MetastoreRelation default, b, None), None],
[Physical execution plan:],
[InsertIntoHiveTable (MetastoreRelation default, result, None), Map(), true],
[ Project [key#109,value#112]],
[  HashOuterJoin [key#109], [key#111], FullOuter, None],
[   Exchange (HashPartitioning [key#109], 20)],
[    HiveTableScan [key#109], (MetastoreRelation default, a, None), None],
[   Exchange (HashPartitioning [key#111], 20)],
[    HiveTableScan [key#111,value#112], (MetastoreRelation default, b, None), None]
LeftOuterJoin: took 16072 ms ([3000000] records)
LeftOuterJoin: took 14394 ms ([3000000] records)
RightOuterJoin: took 14802 ms ([3000000] records)
RightOuterJoin: took 14747 ms ([3000000] records)
FullOuterJoin: took 17715 ms ([6000000] records)
FullOuterJoin: took 17629 ms ([6000000] records)
```

Without this PR, the benchmark will run seems never end.

Author: Cheng Hao <hao.cheng@intel.com>

Closes #1147 from chenghao-intel/hash_based_outer_join and squashes the following commits:

65c599e [Cheng Hao] Fix issues with the community comments
72b1394 [Cheng Hao] Fix bug of stale value in joinedRow
55baef7 [Cheng Hao] Add HashOuterJoin
2014-08-01 11:27:12 -07:00