make the `TakeOrdered` strategy and operator more general, such that it can optionally handle a projection when necessary
Author: Wenchen Fan <cloud0fan@outlook.com>
Closes#6780 from cloud-fan/limit and squashes the following commits:
34aa07b [Wenchen Fan] revert
07d5456 [Wenchen Fan] clean closure
20821ec [Wenchen Fan] fix
3676a82 [Wenchen Fan] address comments
b558549 [Wenchen Fan] address comments
214842b [Wenchen Fan] fix style
2d8be83 [Wenchen Fan] add LimitPushDown
948f740 [Wenchen Fan] fix existing
https://issues.apache.org/jira/browse/SPARK-8578
It is not very safe to use a custom output committer when append data to an existing dir. This changes adds the logic to check if we are appending data, and if so, we use the output committer associated with the file output format.
Author: Yin Huai <yhuai@databricks.com>
Closes#6964 from yhuai/SPARK-8578 and squashes the following commits:
43544c4 [Yin Huai] Do not use a custom output commiter when appendiing data.
Using similar approach used in `HiveThriftServer2Suite` to print stdout/stderr of the spawned process instead of logging them to see what happens on Jenkins. (This test suite only fails on Jenkins and doesn't spill out any log...)
cc yhuai
Author: Cheng Lian <lian@databricks.com>
Closes#6978 from liancheng/debug-hive-spark-submit-suite and squashes the following commits:
b031647 [Cheng Lian] Prints process stdout/stderr instead of logging them
This works around a bug in the underlying RetryingMetaStoreClient (HIVE-10384) by refreshing the metastore client on thrift exceptions. We attempt to emulate the proper hive behavior by retrying only as configured by hiveconf.
Author: Eric Liang <ekl@databricks.com>
Closes#6912 from ericl/spark-6749 and squashes the following commits:
2d54b55 [Eric Liang] use conf from state
0e3a74e [Eric Liang] use shim properly
980b3e5 [Eric Liang] Fix conf parsing hive 0.14 conf.
92459b6 [Eric Liang] Work around RetryingMetaStoreClient bug
To reproduce that:
```
JAVA_HOME=/home/hcheng/Java/jdk1.8.0_45 | build/sbt -Phadoop-2.3 -Phive 'test-only org.apache.spark.sql.hive.execution.HiveWindowFunctionQueryWithoutCodeGenSuite'
```
A simple workaround to fix that is update the original query, for getting the output size instead of the exact elements of the array (output by collect_set())
Author: Cheng Hao <hao.cheng@intel.com>
Closes#6402 from chenghao-intel/windowing and squashes the following commits:
99312ad [Cheng Hao] add order by for the select clause
edf8ce3 [Cheng Hao] update the code as suggested
7062da7 [Cheng Hao] fix the collect_set() behaviour differences under different versions of JDK
Currently we auto alias expression in parser. However, during parser phase we don't have enough information to do the right alias. For example, Generator that has more than 1 kind of element need MultiAlias, ExtractValue don't need Alias if it's in middle of a ExtractValue chain.
Author: Wenchen Fan <cloud0fan@outlook.com>
Closes#6647 from cloud-fan/alias and squashes the following commits:
552eba4 [Wenchen Fan] fix python
5b5786d [Wenchen Fan] fix agg
73a90cb [Wenchen Fan] fix case-preserve of ExtractValue
4cfd23c [Wenchen Fan] fix order by
d18f401 [Wenchen Fan] refine
9f07359 [Wenchen Fan] address comments
39c1aef [Wenchen Fan] small fix
33640ec [Wenchen Fan] auto alias expressions in analyzer
This PR fixes a Parquet output file name collision bug which may cause data loss. Changes made:
1. Identify each write job issued by `InsertIntoHadoopFsRelation` with a UUID
All concrete data sources which extend `HadoopFsRelation` (Parquet and ORC for now) must use this UUID to generate task output file path to avoid name collision.
2. Make `TestHive` use a local mode `SparkContext` with 32 threads to increase parallelism
The major reason for this is that, the original parallelism of 2 is too low to reproduce the data loss issue. Also, higher concurrency may potentially caught more concurrency bugs during testing phase. (It did help us spotted SPARK-8501.)
3. `OrcSourceSuite` was updated to workaround SPARK-8501, which we detected along the way.
NOTE: This PR is made a little bit more complicated than expected because we hit two other bugs on the way and have to work them around. See [SPARK-8501] [1] and [SPARK-8513] [2].
[1]: https://github.com/liancheng/spark/tree/spark-8501
[2]: https://github.com/liancheng/spark/tree/spark-8513
----
Some background and a summary of offline discussion with yhuai about this issue for better understanding:
In 1.4.0, we added `HadoopFsRelation` to abstract partition support of all data sources that are based on Hadoop `FileSystem` interface. Specifically, this makes partition discovery, partition pruning, and writing dynamic partitions for data sources much easier.
To support appending, the Parquet data source tries to find out the max part number of part-files in the destination directory (i.e., `<id>` in output file name `part-r-<id>.gz.parquet`) at the beginning of the write job. In 1.3.0, this step happens on driver side before any files are written. However, in 1.4.0, this is moved to task side. Unfortunately, for tasks scheduled later, they may see wrong max part number generated of files newly written by other finished tasks within the same job. This actually causes a race condition. In most cases, this only causes nonconsecutive part numbers in output file names. But when the DataFrame contains thousands of RDD partitions, it's likely that two tasks may choose the same part number, then one of them gets overwritten by the other.
Before `HadoopFsRelation`, Spark SQL already supports appending data to Hive tables. From a user's perspective, these two look similar. However, they differ a lot internally. When data are inserted into Hive tables via Spark SQL, `InsertIntoHiveTable` simulates Hive's behaviors:
1. Write data to a temporary location
2. Move data in the temporary location to the final destination location using
- `Hive.loadTable()` for non-partitioned table
- `Hive.loadPartition()` for static partitions
- `Hive.loadDynamicPartitions()` for dynamic partitions
The important part is that, `Hive.copyFiles()` is invoked in step 2 to move the data to the destination directory (I found the name is kinda confusing since no "copying" occurs here, we are just moving and renaming stuff). If a file in the source directory and another file in the destination directory happen to have the same name, say `part-r-00001.parquet`, the former is moved to the destination directory and renamed with a `_copy_N` postfix (`part-r-00001_copy_1.parquet`). That's how Hive handles appending and avoids name collision between different write jobs.
Some alternatives fixes considered for this issue:
1. Use a similar approach as Hive
This approach is not preferred in Spark 1.4.0 mainly because file metadata operations in S3 tend to be slow, especially for tables with lots of file and/or partitions. That's why `InsertIntoHadoopFsRelation` just inserts to destination directory directly, and is often used together with `DirectParquetOutputCommitter` to reduce latency when working with S3. This means, we don't have the chance to do renaming, and must avoid name collision from the very beginning.
2. Same as 1.3, just move max part number detection back to driver side
This isn't doable because unlike 1.3, 1.4 also takes dynamic partitioning into account. When inserting into dynamic partitions, we don't know which partition directories will be touched on driver side before issuing the write job. Checking all partition directories is simply too expensive for tables with thousands of partitions.
3. Add extra component to output file names to avoid name collision
This seems to be the only reasonable solution for now. To be more specific, we need a JOB level unique identifier to identify all write jobs issued by `InsertIntoHadoopFile`. Notice that TASK level unique identifiers can NOT be used. Because in this way a speculative task will write to a different output file from the original task. If both tasks succeed, duplicate output will be left behind. Currently, the ORC data source adds `System.currentTimeMillis` to the output file name for uniqueness. This doesn't work because of exactly the same reason.
That's why this PR adds a job level random UUID in `BaseWriterContainer` (which is used by `InsertIntoHadoopFsRelation` to issue write jobs). The drawback is that record order is not preserved any more (output files of a later job may be listed before those of a earlier job). However, we never promise to preserve record order when writing data, and Hive doesn't promise this either because the `_copy_N` trick breaks the order.
Author: Cheng Lian <lian@databricks.com>
Closes#6864 from liancheng/spark-8406 and squashes the following commits:
db7a46a [Cheng Lian] More comments
f5c1133 [Cheng Lian] Addresses comments
85c478e [Cheng Lian] Workarounds SPARK-8513
088c76c [Cheng Lian] Adds comment about SPARK-8501
99a5e7e [Cheng Lian] Uses job level UUID in SimpleTextRelation and avoids double task abortion
4088226 [Cheng Lian] Works around SPARK-8501
1d7d206 [Cheng Lian] Adds more logs
8966bbb [Cheng Lian] Fixes Scala style issue
18b7003 [Cheng Lian] Uses job level UUID to take speculative tasks into account
3806190 [Cheng Lian] Lets TestHive use all cores by default
748dbd7 [Cheng Lian] Adding UUID to output file name to avoid accidental overwriting
Currently [the test case for SPARK-7862] [1] writes 100,000 lines of integer triples to stderr and makes Jenkins build output unnecessarily large and it's hard to debug other build errors. A proper fix is on the way in #6882. This PR ignores this test case temporarily until #6882 is merged.
[1]: https://github.com/apache/spark/pull/6404/files#diff-1ea02a6fab84e938582f7f87cc4d9ea1R641
Author: Cheng Lian <lian@databricks.com>
Closes#6925 from liancheng/spark-8508 and squashes the following commits:
41e5b47 [Cheng Lian] Ignores the test case until #6882 is merged
The issue link [SPARK-8379](https://issues.apache.org/jira/browse/SPARK-8379)
Currently,when we insert data to the dynamic partition with speculative tasks we will get the Exception
```
org.apache.hadoop.ipc.RemoteException(org.apache.hadoop.hdfs.server.namenode.LeaseExpiredException):
Lease mismatch on /tmp/hive-jeanlyn/hive_2015-06-15_15-20-44_734_8801220787219172413-1/-ext-10000/ds=2015-06-15/type=2/part-00301.lzo
owned by DFSClient_attempt_201506031520_0011_m_000189_0_-1513487243_53
but is accessed by DFSClient_attempt_201506031520_0011_m_000042_0_-1275047721_57
```
This pr try to write the data to temporary dir when using dynamic parition avoid the speculative tasks writing the same file
Author: jeanlyn <jeanlyn92@gmail.com>
Closes#6833 from jeanlyn/speculation and squashes the following commits:
64bbfab [jeanlyn] use FileOutputFormat.getTaskOutputPath to get the path
8860af0 [jeanlyn] remove the never using code
e19a3bd [jeanlyn] avoid speculative tasks write same file
**Summary of the problem in SPARK-8470.** When using `HiveContext` to create a data frame of a user case class, Spark throws `scala.reflect.internal.MissingRequirementError` when it tries to infer the schema using reflection. This is caused by `HiveContext` silently overwriting the context class loader containing the user classes.
**What this issue is about.** This issue adds regression tests for SPARK-8470, which is already fixed in #6891. We closed SPARK-8470 as a duplicate because it is a different manifestation of the same problem in SPARK-8368. Due to the complexity of the reproduction, this requires us to pre-package a special test jar and include it in the Spark project itself.
I tested this with and without the fix in #6891 and verified that it passes only if the fix is present.
Author: Andrew Or <andrew@databricks.com>
Closes#6909 from andrewor14/SPARK-8498 and squashes the following commits:
5e9d688 [Andrew Or] Add regression test for SPARK-8470
https://issues.apache.org/jira/browse/SPARK-8368
Also, I add tests according https://issues.apache.org/jira/browse/SPARK-8058.
Author: Yin Huai <yhuai@databricks.com>
Closes#6891 from yhuai/SPARK-8368 and squashes the following commits:
37bb3db [Yin Huai] Update test timeout and comment.
8762eec [Yin Huai] Style.
695cd2d [Yin Huai] Correctly set the class loader in the conf of the state in client wrapper.
b3378fe [Yin Huai] Failed tests.
`Path.toUri.getPath` strips scheme part of output path (from `file:///foo` to `/foo`), which causes ORC data source only writes to the file system configured in Hadoop configuration. Should use `Path.toString` instead.
Author: Cheng Lian <lian@databricks.com>
Closes#6892 from liancheng/spark-8458 and squashes the following commits:
87f8199 [Cheng Lian] Don't strip scheme of output path when writing ORC files
Author: Sandy Ryza <sandy@cloudera.com>
Closes#6679 from sryza/sandy-spark-8135 and squashes the following commits:
c5554ff [Sandy Ryza] SPARK-8135. In SerializableWritable, don't load defaults when instantiating Configuration
This PR aimed to resolve udf_struct test failure in HiveCompatibilitySuite.
Currently, this is done by loosening CreateStruct's children type from NamedExpression to Expression and automatically generating StructField name for non-NamedExpression children.
The naming convention for unnamed children follows the udf's counterpart in Hive:
`col1, col2, col3, ...`
Author: Yijie Shen <henry.yijieshen@gmail.com>
Closes#6828 from yijieshen/SPARK-8283 and squashes the following commits:
6052b73 [Yijie Shen] Doc fix
677e0b7 [Yijie Shen] Resolve udf_struct test failure by automatically generate structField name for non-NamedExpression children
1. Add `SQLConfEntry` to store the information about a configuration. For those configurations that cannot be found in `sql-programming-guide.md`, I left the doc as `<TODO>`.
2. Verify the value when setting a configuration if this is in SQLConf.
3. Use `SET -v` to display all public configurations.
Author: zsxwing <zsxwing@gmail.com>
Closes#6747 from zsxwing/sqlconf and squashes the following commits:
7d09bad [zsxwing] Use SQLConfEntry in HiveContext
49f6213 [zsxwing] Add getConf, setConf to SQLContext and HiveContext
e014f53 [zsxwing] Merge branch 'master' into sqlconf
93dad8e [zsxwing] Fix the unit tests
cf950c1 [zsxwing] Fix the code style and tests
3c5f03e [zsxwing] Add unsetConf(SQLConfEntry) and fix the code style
a2f4add [zsxwing] getConf will return the default value if a config is not set
037b1db [zsxwing] Add schema to SetCommand
0520c3c [zsxwing] Merge branch 'master' into sqlconf
7afb0ec [zsxwing] Fix the configurations about HiveThriftServer
7e728e3 [zsxwing] Add doc for SQLConfEntry and fix 'toString'
5e95b10 [zsxwing] Add enumConf
c6ba76d [zsxwing] setRawString => setConfString, getRawString => getConfString
4abd807 [zsxwing] Fix the test for 'set -v'
6e47e56 [zsxwing] Fix the compilation error
8973ced [zsxwing] Remove floatConf
1fc3a8b [zsxwing] Remove the 'conf' command and use 'set -v' instead
99c9c16 [zsxwing] Fix tests that use SQLConfEntry as a string
88a03cc [zsxwing] Add new lines between confs and return types
ce7c6c8 [zsxwing] Remove seqConf
f3c1b33 [zsxwing] Refactor SQLConf to display better error message
We encourage people to use TestHive in unit tests, because it's
impossible to create more than one HiveContext within one process. The
current implementation locks people into using a local[2] SparkContext
underlying their HiveContext. We should make it possible to override
this using a system property so that people can test against
local-cluster or remote spark clusters to make their tests more
realistic.
Author: Punya Biswal <pbiswal@palantir.com>
Closes#6844 from punya/feature/SPARK-8397 and squashes the following commits:
97ef394 [Punya Biswal] [SPARK-8397][SQL] Allow custom configuration for TestHive
https://issues.apache.org/jira/browse/SPARK-8306
I will try to add a test later.
marmbrus aarondav
Author: Yin Huai <yhuai@databricks.com>
Closes#6758 from yhuai/SPARK-8306 and squashes the following commits:
1292346 [Yin Huai] [SPARK-8306] AddJar command needs to set the new class loader to the HiveConf inside executionHive.state.
when i test the following code:
hiveContext.sql("""use testdb""")
val df = (1 to 3).map(i => (i, s"val_$i", i * 2)).toDF("a", "b", "c")
df.write
.format("parquet")
.mode(SaveMode.Overwrite)
.saveAsTable("ttt3")
hiveContext.sql("show TABLES in default")
found that the table ttt3 will be created under the database "default"
Author: baishuo <vc_java@hotmail.com>
Closes#6695 from baishuo/SPARK-8516-use-database and squashes the following commits:
9e155f9 [baishuo] remove no use comment
cb9f027 [baishuo] modify testcase
00a7a2d [baishuo] modify testcase
4df48c7 [baishuo] modify testcase
b742e69 [baishuo] modify testcase
3d19ad9 [baishuo] create table to specific database
In order to have better performance out of box, this PR turn on codegen by default, then codegen can be tested by sql/test and hive/test.
This PR also fix some corner cases for codegen.
Before 1.5 release, we should re-visit this, turn it off if it's not stable or causing regressions.
cc rxin JoshRosen
Author: Davies Liu <davies@databricks.com>
Closes#6726 from davies/enable_codegen and squashes the following commits:
f3b25a5 [Davies Liu] fix warning
73750ea [Davies Liu] fix long overflow when compare
3017a47 [Davies Liu] Merge branch 'master' of github.com:apache/spark into enable_codegen
a7d75da [Davies Liu] Merge branch 'master' of github.com:apache/spark into enable_codegen
ff5b75a [Davies Liu] Merge branch 'master' of github.com:apache/spark into enable_codegen
f4cf2c2 [Davies Liu] fix style
99fc139 [Davies Liu] Merge branch 'enable_codegen' of github.com:davies/spark into enable_codegen
91fc7a2 [Davies Liu] disable codegen for ScalaUDF
207e339 [Davies Liu] Update CodeGenerator.scala
44573a3 [Davies Liu] check thread safety of expression
f3886fa [Davies Liu] don't inline primitiveTerm for null literal
c8e7cd2 [Davies Liu] address comment
a8618c9 [Davies Liu] enable codegen by default
This change has two parts.
The first one gets rid of "ReflectionMagic". That worked well for the differences between 0.12 and
0.13, but breaks in 0.14, since some of the APIs that need to be used have primitive types. I could
not figure out a way to make that class work with primitive types. So instead I wrote some shims
(I can already hear the collective sigh) that find the appropriate methods via reflection. This should
be faster since the method instances are cached, and the code is not much uglier than before,
with the advantage that all the ugliness is local to one file (instead of multiple switch statements on
the version being used scattered in ClientWrapper).
The second part is simple: add code to handle Hive 0.14. A few new methods had to be added
to the new shims.
Author: Marcelo Vanzin <vanzin@cloudera.com>
Closes#6627 from vanzin/SPARK-8065 and squashes the following commits:
3fa4270 [Marcelo Vanzin] Indentation style.
4b8a3d4 [Marcelo Vanzin] Fix dep exclusion.
be3d0cc [Marcelo Vanzin] Merge branch 'master' into SPARK-8065
ca3fb1e [Marcelo Vanzin] Merge branch 'master' into SPARK-8065
b43f13e [Marcelo Vanzin] Since exclusions seem to work, clean up some of the code.
73bd161 [Marcelo Vanzin] Botched merge.
d2ddf01 [Marcelo Vanzin] Comment about excluded dep.
0c929d1 [Marcelo Vanzin] Merge branch 'master' into SPARK-8065
2c3c02e [Marcelo Vanzin] Try to fix tests by adding support for exclusions.
0a03470 [Marcelo Vanzin] Try to fix tests by upgrading calcite dependency.
13b2dfa [Marcelo Vanzin] Fix NPE.
6439d88 [Marcelo Vanzin] Minor style thing.
69b017b [Marcelo Vanzin] Style.
a21cad8 [Marcelo Vanzin] Part II: Add shims / version for Hive 0.14.
ae98c87 [Marcelo Vanzin] PART I: Get rid of reflection magic.
JIRA: https://issues.apache.org/jira/browse/SPARK-8052
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#6645 from viirya/cast_string_integraltype and squashes the following commits:
e19c6a3 [Liang-Chi Hsieh] For comment.
c3e472a [Liang-Chi Hsieh] Add test.
7ced9b0 [Liang-Chi Hsieh] Use java.math.BigDecimal for casting String to Decimal instead of using toDouble.
Currently, we use o.a.s.sql.Row both internally and externally. The external interface is wider than what the internal needs because it is designed to facilitate end-user programming. This design has proven to be very error prone and cumbersome for internal Row implementations.
As a first step, we create an InternalRow interface in the catalyst module, which is identical to the current Row interface. And we switch all internal operators/expressions to use this InternalRow instead. When we need to expose Row, we convert the InternalRow implementation into Row for users.
For all public API, we use Row (for example, data source APIs), which will be converted into/from InternalRow by CatalystTypeConverters.
For all internal data sources (Json, Parquet, JDBC, Hive), we use InternalRow for better performance, casted into Row in buildScan() (without change the public API). When create a PhysicalRDD, we cast them back to InternalRow.
cc rxin marmbrus JoshRosen
Author: Davies Liu <davies@databricks.com>
Closes#6792 from davies/internal_row and squashes the following commits:
f2abd13 [Davies Liu] fix scalastyle
a7e025c [Davies Liu] move InternalRow into catalyst
30db8ba [Davies Liu] Merge branch 'master' of github.com:apache/spark into internal_row
7cbced8 [Davies Liu] separate Row and InternalRow
[Related PR SPARK-7044] (https://github.com/apache/spark/pull/5671)
Author: zhichao.li <zhichao.li@intel.com>
Closes#6404 from zhichao-li/transform and squashes the following commits:
8418c97 [zhichao.li] add comments and remove useless failAfter logic
d9677e1 [zhichao.li] redirect the error desitination to be the same as the current process
Unit test is still in Scala.
Author: Reynold Xin <rxin@databricks.com>
Closes#6738 from rxin/utf8string-java and squashes the following commits:
562dc6e [Reynold Xin] Flag...
98e600b [Reynold Xin] Another try with encoding setting ..
cfa6bdf [Reynold Xin] Merge branch 'master' into utf8string-java
a3b124d [Reynold Xin] Try different UTF-8 encoded characters.
1ff7c82 [Reynold Xin] Enable UTF-8 encoding.
82d58cc [Reynold Xin] Reset run-tests.
2cb3c69 [Reynold Xin] Use utf-8 encoding in set bytes.
53f8ef4 [Reynold Xin] Hack Jenkins to run one test.
9a48e8d [Reynold Xin] Fixed runtime compilation error.
911c450 [Reynold Xin] Moved unit test also to Java.
4eff7bd [Reynold Xin] Improved unit test coverage.
8e89a3c [Reynold Xin] Fixed tests.
77c64bd [Reynold Xin] Fixed string type codegen.
ffedb62 [Reynold Xin] Code review feedback.
0967ce6 [Reynold Xin] Fixed import ordering.
45a123d [Reynold Xin] [SPARK-8286] Rewrite UTF8String in Java and move it into unsafe package.
```
create table t1 (a int, b string) as select key, value from src;
desc t1;
key int NULL
value string NULL
```
Thus Hive doesn't support specifying the column list for target table in CTAS, however, we should either throwing exception explicity, or supporting the this feature, we just pick up the later one, which seems useful and straightforward.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#6458 from chenghao-intel/ctas_column and squashes the following commits:
d1fa9b6 [Cheng Hao] bug in unittest
4e701aa [Cheng Hao] update as feedback
f305ec1 [Cheng Hao] support specifying the column list for target table in CTAS
This PR change to use Long as internal type for TimestampType for efficiency, which means it will the precision below 100ns.
Author: Davies Liu <davies@databricks.com>
Closes#6733 from davies/timestamp and squashes the following commits:
d9565fa [Davies Liu] remove print
65cf2f1 [Davies Liu] fix Timestamp in SparkR
86fecfb [Davies Liu] disable two timestamp tests
8f77ee0 [Davies Liu] fix scala style
246ee74 [Davies Liu] address comments
309d2e1 [Davies Liu] use Long for TimestampType in SQL
This is a followup to #6712.
Author: Reynold Xin <rxin@databricks.com>
Closes#6739 from rxin/6712-followup and squashes the following commits:
fd9acfb [Reynold Xin] [SPARK-7886] Added unit test for HAVING aggregate pushdown.
This builds on #6710 and also uses FunctionRegistry for function lookup in HiveContext.
Author: Reynold Xin <rxin@databricks.com>
Closes#6712 from rxin/udf-registry-hive and squashes the following commits:
f4c2df0 [Reynold Xin] Fixed style violation.
0bd4127 [Reynold Xin] Fixed Python UDFs.
f9a0378 [Reynold Xin] Disable one more test.
5609494 [Reynold Xin] Disable some failing tests.
4efea20 [Reynold Xin] Don't check children resolved for UDF resolution.
2ebe549 [Reynold Xin] Removed more hardcoded functions.
aadce78 [Reynold Xin] [SPARK-7886] Use FunctionRegistry for built-in expressions in HiveContext.
This patch switches to using FunctionRegistry for built-in expressions. It is based on #6463, but with some work to simplify it along with unit tests.
TODOs for future pull requests:
- Use static registration so we don't need to register all functions every time we start a new SQLContext
- Switch to using this in HiveContext
Author: Reynold Xin <rxin@databricks.com>
Author: Santiago M. Mola <santi@mola.io>
Closes#6710 from rxin/udf-registry and squashes the following commits:
6930822 [Reynold Xin] Fixed Python test.
b802c9a [Reynold Xin] Made UDF case insensitive.
e60d815 [Reynold Xin] Made UDF case insensitive.
852f9c0 [Reynold Xin] Fixed style violation.
e76a3c1 [Reynold Xin] Fixed parser.
52ddaba [Reynold Xin] Fixed compilation.
ee7854f [Reynold Xin] Improved error reporting.
ff906f2 [Reynold Xin] More robust constructor calling.
77b46f1 [Reynold Xin] Simplified the code.
2a2a149 [Reynold Xin] Merge pull request #6463 from smola/SPARK-7886
8616924 [Santiago M. Mola] [SPARK-7886] Add built-in expressions to FunctionRegistry.
1. explicitly import implicit conversion support.
2. use .nonEmpty instead of .size > 0
3. use val instead of var
4. comment indention
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#6700 from adrian-wang/shimsimprove and squashes the following commits:
d22e108 [Daoyuan Wang] several fix for HiveShim
As described in SPARK-8079, when writing a DataFrame to a `HadoopFsRelation`, if `HadoopFsRelation.prepareForWriteJob` throws exception, an unexpected NPE will be thrown during job abortion. (This issue doesn't bring much damage since the job is failing anyway.)
This PR makes the job/task abortion logic in `InsertIntoHadoopFsRelation` more robust to avoid such confusing exceptions.
Author: Cheng Lian <lian@databricks.com>
Closes#6612 from liancheng/spark-8079 and squashes the following commits:
87cd81e [Cheng Lian] Addresses @rxin's comment
1864c75 [Cheng Lian] Addresses review comments
9e6dbb3 [Cheng Lian] Makes InsertIntoHadoopFsRelation job/task abortion more robust
Author: Reynold Xin <rxin@databricks.com>
Closes#6677 from rxin/test-wildcard and squashes the following commits:
8a17b33 [Reynold Xin] Fixed line length.
6663813 [Reynold Xin] [SPARK-8114][SQL] Remove some wildcard import on TestSQLContext._ round 3.
Support runInBackground in SparkExecuteStatementOperation, and add cancellation
Author: Dong Wang <dong@databricks.com>
Closes#6207 from dongwang218/SPARK-6964-jdbc-cancel and squashes the following commits:
687c113 [Dong Wang] fix 100 characters
7bfa2a7 [Dong Wang] fix merge
380480f [Dong Wang] fix for liancheng's comments
eb3e385 [Dong Wang] small nit
341885b [Dong Wang] small fix
3d8ebf8 [Dong Wang] add spark.sql.hive.thriftServer.async flag
04142c3 [Dong Wang] set SQLSession for async execution
184ec35 [Dong Wang] keep hive conf
819ae03 [Dong Wang] [SPARK-6964][SQL][WIP] Support Cancellation in the Thrift Server
Fixed the following packages:
sql.columnar
sql.jdbc
sql.json
sql.parquet
Author: Reynold Xin <rxin@databricks.com>
Closes#6667 from rxin/testsqlcontext_wildcard and squashes the following commits:
134a776 [Reynold Xin] Fixed compilation break.
6da7b69 [Reynold Xin] [SPARK-8114][SQL] Remove some wildcard import on TestSQLContext._ cont'd.
This is a follow-up on #6393. I am removing the following files in this PR.
```
./sql/hive/v0.13.1/src/main/scala/org/apache/spark/sql/hive/Shim13.scala
./sql/hive-thriftserver/v0.13.1/src/main/scala/org/apache/spark/sql/hive/thriftserver/Shim13.scala
```
Basically, I re-factored the shim code as follows-
* Rewrote code directly with Hive 0.13 methods, or
* Converted code into private methods, or
* Extracted code into separate classes
But for leftover code that didn't fit in any of these cases, I created a HiveShim object. For eg, helper functions which wrap Hive 0.13 methods to work around Hive bugs are placed here.
Author: Cheolsoo Park <cheolsoop@netflix.com>
Closes#6604 from piaozhexiu/SPARK-6909 and squashes the following commits:
5dccc20 [Cheolsoo Park] Remove hive shim code
Author: Patrick Wendell <patrick@databricks.com>
Closes#6328 from pwendell/spark-1.5-update and squashes the following commits:
2f42d02 [Patrick Wendell] A few more excludes
4bebcf0 [Patrick Wendell] Update to RC4
61aaf46 [Patrick Wendell] Using new release candidate
55f1610 [Patrick Wendell] Another exclude
04b4f04 [Patrick Wendell] More issues with transient 1.4 changes
36f549b [Patrick Wendell] [SPARK-7801] [BUILD] Updating versions to SPARK 1.5.0
The current code references the schema of the DataFrame to be written before checking save mode. This triggers expensive metadata discovery prematurely. For save mode other than `Append`, this metadata discovery is useless since we either ignore the result (for `Ignore` and `ErrorIfExists`) or delete existing files (for `Overwrite`) later.
This PR fixes this issue by deferring metadata discovery after save mode checking.
Author: Cheng Lian <lian@databricks.com>
Closes#6583 from liancheng/spark-8014 and squashes the following commits:
1aafabd [Cheng Lian] Updates comments
088abaa [Cheng Lian] Avoids schema merging and partition discovery when data schema and partition schema are defined
8fbd93f [Cheng Lian] Fixes SPARK-8014
This closes#6570.
Author: Yin Huai <yhuai@databricks.com>
Author: Reynold Xin <rxin@databricks.com>
Closes#6573 from rxin/deterministic and squashes the following commits:
356cd22 [Reynold Xin] Added unit test for the optimizer.
da3fde1 [Reynold Xin] Merge pull request #6570 from yhuai/SPARK-8023
da56200 [Yin Huai] Comments.
e38f264 [Yin Huai] Comment.
f9d6a73 [Yin Huai] Add a deterministic method to Expression.
https://issues.apache.org/jira/browse/SPARK-8020
Author: Yin Huai <yhuai@databricks.com>
Closes#6563 from yhuai/SPARK-8020 and squashes the following commits:
4e5addc [Yin Huai] style
bf766c6 [Yin Huai] Failed test.
0398f5b [Yin Huai] First populate the SQLConf and then construct executionHive and metadataHive.
Author: Reynold Xin <rxin@databricks.com>
Closes#6541 from rxin/trailing-whitespace-on and squashes the following commits:
f72ebe4 [Reynold Xin] [SPARK-3850] Turn style checker on for trailing whitespaces.
Author: Reynold Xin <rxin@databricks.com>
Closes#6535 from rxin/whitespace-sql and squashes the following commits:
de50316 [Reynold Xin] [SPARK-3850] Trim trailing spaces for SQL.
Author: Reynold Xin <rxin@databricks.com>
This patch had conflicts when merged, resolved by
Committer: Reynold Xin <rxin@databricks.com>
Closes#6527 from rxin/covariant-equals and squashes the following commits:
e7d7784 [Reynold Xin] [SPARK-7975] Enforce CovariantEqualsChecker
Author: Cheng Lian <lian@databricks.com>
Closes#6521 from liancheng/classloader-comment-fix and squashes the following commits:
fc09606 [Cheng Lian] Addresses @srowen's comment
59945c5 [Cheng Lian] Fixes a minor comment mistake in IsolatedClientLoader
I went through all the JavaDocs and tightened up visibility.
Author: Reynold Xin <rxin@databricks.com>
Closes#6526 from rxin/sql-1.4-visibility-for-docs and squashes the following commits:
bc37d1e [Reynold Xin] Tighten up visibility for JavaDoc.
Right now `unit-tests.log` are not of much value because we can't tell where the test boundaries are easily. This patch adds log statements before and after each test to outline the test boundaries, e.g.:
```
===== TEST OUTPUT FOR o.a.s.serializer.KryoSerializerSuite: 'kryo with parallelize for primitive arrays' =====
15/05/27 12:36:39.596 pool-1-thread-1-ScalaTest-running-KryoSerializerSuite INFO SparkContext: Starting job: count at KryoSerializerSuite.scala:230
15/05/27 12:36:39.596 dag-scheduler-event-loop INFO DAGScheduler: Got job 3 (count at KryoSerializerSuite.scala:230) with 4 output partitions (allowLocal=false)
15/05/27 12:36:39.596 dag-scheduler-event-loop INFO DAGScheduler: Final stage: ResultStage 3(count at KryoSerializerSuite.scala:230)
15/05/27 12:36:39.596 dag-scheduler-event-loop INFO DAGScheduler: Parents of final stage: List()
15/05/27 12:36:39.597 dag-scheduler-event-loop INFO DAGScheduler: Missing parents: List()
15/05/27 12:36:39.597 dag-scheduler-event-loop INFO DAGScheduler: Submitting ResultStage 3 (ParallelCollectionRDD[5] at parallelize at KryoSerializerSuite.scala:230), which has no missing parents
...
15/05/27 12:36:39.624 pool-1-thread-1-ScalaTest-running-KryoSerializerSuite INFO DAGScheduler: Job 3 finished: count at KryoSerializerSuite.scala:230, took 0.028563 s
15/05/27 12:36:39.625 pool-1-thread-1-ScalaTest-running-KryoSerializerSuite INFO KryoSerializerSuite:
***** FINISHED o.a.s.serializer.KryoSerializerSuite: 'kryo with parallelize for primitive arrays' *****
...
```
Author: Andrew Or <andrew@databricks.com>
Closes#6441 from andrewor14/demarcate-tests and squashes the following commits:
879b060 [Andrew Or] Fix compile after rebase
d622af7 [Andrew Or] Merge branch 'master' of github.com:apache/spark into demarcate-tests
017c8ba [Andrew Or] Merge branch 'master' of github.com:apache/spark into demarcate-tests
7790b6c [Andrew Or] Fix tests after logical merge conflict
c7460c0 [Andrew Or] Merge branch 'master' of github.com:apache/spark into demarcate-tests
c43ffc4 [Andrew Or] Fix tests?
8882581 [Andrew Or] Fix tests
ee22cda [Andrew Or] Fix log message
fa9450e [Andrew Or] Merge branch 'master' of github.com:apache/spark into demarcate-tests
12d1e1b [Andrew Or] Various whitespace changes (minor)
69cbb24 [Andrew Or] Make all test suites extend SparkFunSuite instead of FunSuite
bbce12e [Andrew Or] Fix manual things that cannot be covered through automation
da0b12f [Andrew Or] Add core tests as dependencies in all modules
f7d29ce [Andrew Or] Introduce base abstract class for all test suites
So we can enable a whitespace enforcement rule in the style checker to save code review time.
Author: Reynold Xin <rxin@databricks.com>
Closes#6478 from rxin/whitespace-hive and squashes the following commits:
e01b0e0 [Reynold Xin] Fixed tests.
a3bba22 [Reynold Xin] [SPARK-7927] whitespace fixes for Hive and ThriftServer.
https://issues.apache.org/jira/browse/SPARK-7853
This fixes the problem introduced by my change in https://github.com/apache/spark/pull/6435, which causes that Hive Context fails to create in spark shell because of the class loader issue.
Author: Yin Huai <yhuai@databricks.com>
Closes#6459 from yhuai/SPARK-7853 and squashes the following commits:
37ad33e [Yin Huai] Do not use hiveQlTable at all.
47cdb6d [Yin Huai] Move hiveconf.set to the end of setConf.
005649b [Yin Huai] Update comment.
35d86f3 [Yin Huai] Access TTable directly to make sure Hive will not internally use any metastore utility functions.
3737766 [Yin Huai] Recursively find all jars.
This PR is based on PR #6396 authored by chenghao-intel. Essentially, Spark SQL should use context classloader to load SerDe classes.
yhuai helped updating the test case, and I fixed a bug in the original `CliSuite`: while testing the CLI tool with `runCliWithin`, we don't append `\n` to the last query, thus the last query is never executed.
Original PR description is pasted below.
----
```
bin/spark-sql --jars ./sql/hive/src/test/resources/hive-hcatalog-core-0.13.1.jar
CREATE TABLE t1(a string, b string) ROW FORMAT SERDE 'org.apache.hive.hcatalog.data.JsonSerDe';
```
Throws exception like
```
15/05/26 00:16:33 ERROR SparkSQLDriver: Failed in [CREATE TABLE t1(a string, b string) ROW FORMAT SERDE 'org.apache.hive.hcatalog.data.JsonSerDe']
org.apache.spark.sql.execution.QueryExecutionException: FAILED: Execution Error, return code 1 from org.apache.hadoop.hive.ql.exec.DDLTask. Cannot validate serde: org.apache.hive.hcatalog.data.JsonSerDe
at org.apache.spark.sql.hive.client.ClientWrapper$$anonfun$runHive$1.apply(ClientWrapper.scala:333)
at org.apache.spark.sql.hive.client.ClientWrapper$$anonfun$runHive$1.apply(ClientWrapper.scala:310)
at org.apache.spark.sql.hive.client.ClientWrapper.withHiveState(ClientWrapper.scala:139)
at org.apache.spark.sql.hive.client.ClientWrapper.runHive(ClientWrapper.scala:310)
at org.apache.spark.sql.hive.client.ClientWrapper.runSqlHive(ClientWrapper.scala:300)
at org.apache.spark.sql.hive.HiveContext.runSqlHive(HiveContext.scala:457)
at org.apache.spark.sql.hive.execution.HiveNativeCommand.run(HiveNativeCommand.scala:33)
at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult$lzycompute(commands.scala:57)
at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult(commands.scala:57)
at org.apache.spark.sql.execution.ExecutedCommand.doExecute(commands.scala:68)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:88)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:88)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:87)
at org.apache.spark.sql.SQLContext$QueryExecution.toRdd$lzycompute(SQLContext.scala:922)
at org.apache.spark.sql.SQLContext$QueryExecution.toRdd(SQLContext.scala:922)
at org.apache.spark.sql.DataFrame.<init>(DataFrame.scala:147)
at org.apache.spark.sql.DataFrame.<init>(DataFrame.scala:131)
at org.apache.spark.sql.DataFrame$.apply(DataFrame.scala:51)
at org.apache.spark.sql.SQLContext.sql(SQLContext.scala:727)
at org.apache.spark.sql.hive.thriftserver.AbstractSparkSQLDriver.run(AbstractSparkSQLDriver.scala:57)
```
Author: Cheng Hao <hao.cheng@intel.com>
Author: Cheng Lian <lian@databricks.com>
Author: Yin Huai <yhuai@databricks.com>
Closes#6435 from liancheng/classLoader and squashes the following commits:
d4c4845 [Cheng Lian] Fixes CliSuite
75e80e2 [Yin Huai] Update the fix.
fd26533 [Cheng Hao] scalastyle
dd78775 [Cheng Hao] workaround for classloader of IsolatedClientLoader
As stated in SPARK-7684, currently `TestHive.reset` has some execution order specific bug, which makes running specific test suites locally pretty frustrating. This PR refactors `MetastoreDataSourcesSuite` (which relies on `TestHive.reset` heavily) using various `withXxx` utility methods in `SQLTestUtils` to ask each test case to cleanup their own mess so that we can avoid calling `TestHive.reset`.
Author: Cheng Lian <lian@databricks.com>
Author: Yin Huai <yhuai@databricks.com>
Closes#6353 from liancheng/workaround-spark-7684 and squashes the following commits:
26939aa [Yin Huai] Move the initialization of jsonFilePath to beforeAll.
a423d48 [Cheng Lian] Fixes Scala style issue
dfe45d0 [Cheng Lian] Refactors MetastoreDataSourcesSuite to workaround SPARK-7684
92a116d [Cheng Lian] Fixes minor styling issues
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#6318 from adrian-wang/dynpart and squashes the following commits:
ad73b61 [Daoyuan Wang] not use sqlTestUtils for try catch because dont have sqlcontext here
6c33b51 [Daoyuan Wang] fix according to liancheng
f0f8074 [Daoyuan Wang] some specific types as dynamic partition
This type is not really used. Might as well remove it.
Author: Reynold Xin <rxin@databricks.com>
Closes#6427 from rxin/evalutedType and squashes the following commits:
51a319a [Reynold Xin] [SPARK-7887][SQL] Remove EvaluatedType from SQL Expression.
I grep'ed hive-0.12.0 in the source code and removed all the profiles and doc references.
Author: Cheolsoo Park <cheolsoop@netflix.com>
Closes#6393 from piaozhexiu/SPARK-7850 and squashes the following commits:
fb429ce [Cheolsoo Park] Remove hive-0.13.1 profile
82bf09a [Cheolsoo Park] Remove hive 0.12.0 shim code
f3722da [Cheolsoo Park] Remove hive-0.12.0 profile and references from POM and build docs
So that potential partial/corrupted data files left by failed tasks/jobs won't affect normal data scan.
Author: Cheng Lian <lian@databricks.com>
Closes#6411 from liancheng/spark-7868 and squashes the following commits:
273ea36 [Cheng Lian] Ignores _temporary directories
In `DataSourceStrategy.createPhysicalRDD`, we use the relation schema as the target schema for converting incoming rows into Catalyst rows. However, we should be using the output schema instead, since our scan might return a subset of the relation's columns.
This patch incorporates #6414 by liancheng, which fixes an issue in `SimpleTestRelation` that prevented this bug from being caught by our old tests:
> In `SimpleTextRelation`, we specified `needsConversion` to `true`, indicating that values produced by this testing relation should be of Scala types, and need to be converted to Catalyst types when necessary. However, we also used `Cast` to convert strings to expected data types. And `Cast` always produces values of Catalyst types, thus no conversion is done at all. This PR makes `SimpleTextRelation` produce Scala values so that data conversion code paths can be properly tested.
Closes#5986.
Author: Josh Rosen <joshrosen@databricks.com>
Author: Cheng Lian <lian@databricks.com>
Author: Cheng Lian <liancheng@users.noreply.github.com>
Closes#6400 from JoshRosen/SPARK-7858 and squashes the following commits:
e71c866 [Josh Rosen] Re-fix bug so that the tests pass again
56b13e5 [Josh Rosen] Add regression test to hadoopFsRelationSuites
2169a0f [Josh Rosen] Remove use of SpecificMutableRow and BufferedIterator
6cd7366 [Josh Rosen] Fix SPARK-7858 by using output types for conversion.
5a00e66 [Josh Rosen] Add assertions in order to reproduce SPARK-7858
8ba195c [Cheng Lian] Merge 9968fba9979287aaa1f141ba18bfb9d4c116a3b3 into 61664732b2
9968fba [Cheng Lian] Tests the data type conversion code paths
When committing/aborting a write task issued in `InsertIntoHadoopFsRelation`, if an exception is thrown from `OutputWriter.close()`, the committing/aborting process will be interrupted, and leaves messy stuff behind (e.g., the `_temporary` directory created by `FileOutputCommitter`).
This PR makes these two process more robust by catching potential exceptions and falling back to normal task committment/abort.
Author: Cheng Lian <lian@databricks.com>
Closes#6378 from liancheng/spark-7838 and squashes the following commits:
f18253a [Cheng Lian] Makes task committing/aborting in InsertIntoHadoopFsRelation more robust
The "Database does not exist" error reported in SPARK-7684 was caused by `HiveContext.newTemporaryConfiguration()`, which always creates a new temporary metastore directory and returns a metastore configuration pointing that directory. This makes `TestHive.reset()` always replaces old temporary metastore with an empty new one.
Author: Cheng Lian <lian@databricks.com>
Closes#6359 from liancheng/spark-7684 and squashes the following commits:
95d2eb8 [Cheng Lian] Addresses @marmbrust's comment
042769d [Cheng Lian] Don't create new temp directory in HiveContext.newTemporaryConfiguration()
This one continues the work of https://github.com/apache/spark/pull/6216.
Author: Yin Huai <yhuai@databricks.com>
Author: Reynold Xin <rxin@databricks.com>
Closes#6366 from yhuai/insert and squashes the following commits:
3d717fb [Yin Huai] Use insertInto to handle the casue when table exists and Append is used for saveAsTable.
56d2540 [Yin Huai] Add PreWriteCheck to HiveContext's analyzer.
c636e35 [Yin Huai] Remove unnecessary empty lines.
cf83837 [Yin Huai] Move insertInto to write. Also, remove the partition columns from InsertIntoHadoopFsRelation.
0841a54 [Reynold Xin] Removed experimental tag for deprecated methods.
33ed8ef [Reynold Xin] [SPARK-7654][SQL] Move insertInto into reader/writer interface.
JIRA: https://issues.apache.org/jira/browse/SPARK-7270
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#5864 from viirya/dyn_partition_insert and squashes the following commits:
b5627df [Liang-Chi Hsieh] For comments.
3b21e4b [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into dyn_partition_insert
8a4352d [Liang-Chi Hsieh] Consider dynamic partition when inserting into hive table.
https://issues.apache.org/jira/browse/SPARK-7758
When initializing `executionHive`, we only masks
`javax.jdo.option.ConnectionURL` to override metastore location. However,
other properties that relates to the actual Hive metastore data source are not
masked. For example, when using Spark SQL with a PostgreSQL backed Hive
metastore, `executionHive` actually tries to use settings read from
`hive-site.xml`, which talks about PostgreSQL, to connect to the temporary
Derby metastore, thus causes error.
To fix this, we need to mask all metastore data source properties.
Specifically, according to the code of [Hive `ObjectStore.getDataSourceProps()`
method] [1], all properties whose name mentions "jdo" and "datanucleus" must be
included.
[1]: https://github.com/apache/hive/blob/release-0.13.1/metastore/src/java/org/apache/hadoop/hive/metastore/ObjectStore.java#L288
Have tested using postgre sql as metastore, it worked fine.
Author: WangTaoTheTonic <wangtao111@huawei.com>
Closes#6314 from WangTaoTheTonic/SPARK-7758 and squashes the following commits:
ca7ae7c [WangTaoTheTonic] add comments
86caf2c [WangTaoTheTonic] delete unused import
e4f0feb [WangTaoTheTonic] block more data source related property
92a81fa [WangTaoTheTonic] fix style check
e3e683d [WangTaoTheTonic] override more configs to avoid failuer connecting to postgre sql
This closes#6104.
Author: Cheng Hao <hao.cheng@intel.com>
Author: Reynold Xin <rxin@databricks.com>
Closes#6343 from rxin/window-df and squashes the following commits:
026d587 [Reynold Xin] Address code review feedback.
dc448fe [Reynold Xin] Fixed Hive tests.
9794d9d [Reynold Xin] Moved Java test package.
9331605 [Reynold Xin] Refactored API.
3313e2a [Reynold Xin] Merge pull request #6104 from chenghao-intel/df_window
d625a64 [Cheng Hao] Update the dataframe window API as suggsted
c141fb1 [Cheng Hao] hide all of properties of the WindowFunctionDefinition
3b1865f [Cheng Hao] scaladoc typos
f3fd2d0 [Cheng Hao] polish the unit test
6847825 [Cheng Hao] Add additional analystcs functions
57e3bc0 [Cheng Hao] typos
24a08ec [Cheng Hao] scaladoc
28222ed [Cheng Hao] fix bug of range/row Frame
1d91865 [Cheng Hao] style issue
53f89f2 [Cheng Hao] remove the over from the functions.scala
964c013 [Cheng Hao] add more unit tests and window functions
64e18a7 [Cheng Hao] Add Window Function support for DataFrame
Author: Yin Huai <yhuai@databricks.com>
Author: Cheng Lian <lian@databricks.com>
Closes#6285 from liancheng/spark-7763 and squashes the following commits:
bb2829d [Yin Huai] Fix hashCode.
d677f7d [Cheng Lian] Fixes Scala style issue
44b283f [Cheng Lian] Adds test case for SPARK-7616
6733276 [Yin Huai] Fix a bug that potentially causes https://issues.apache.org/jira/browse/SPARK-7616.
6cabf3c [Yin Huai] Update unit test.
7e02910 [Yin Huai] Use metastore partition columns and do not hijack maybePartitionSpec.
e9a03ec [Cheng Lian] Persists partition columns into metastore
java.lang.Math.exp(1.0) has different result between jdk versions. so do not use createQueryTest, write a separate test for it.
```
jdk version result
1.7.0_11 2.7182818284590455
1.7.0_05 2.7182818284590455
1.7.0_71 2.718281828459045
```
Author: scwf <wangfei1@huawei.com>
Closes#6274 from scwf/java_method and squashes the following commits:
3dd2516 [scwf] address comments
5fa1459 [scwf] style
df46445 [scwf] fix test error
fcb6d22 [scwf] fix udf_java_method
When no partition columns can be found, we should have an empty `PartitionSpec`, rather than a `PartitionSpec` with empty partition columns.
This PR together with #6285 should fix SPARK-7749.
Author: Cheng Lian <lian@databricks.com>
Author: Yin Huai <yhuai@databricks.com>
Closes#6287 from liancheng/spark-7749 and squashes the following commits:
a799ff3 [Cheng Lian] Adds test cases for SPARK-7749
c4949be [Cheng Lian] Minor refactoring, and tolerant _TEMPORARY directory name
5aa87ea [Yin Huai] Make parsePartitions more robust.
fc56656 [Cheng Lian] Returns empty PartitionSpec if no partition columns can be inferred
19ae41e [Cheng Lian] Don't list base directory as leaf directory
Follow up of #6340, to avoid the test report missing once it fails.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#6312 from chenghao-intel/rollup_minor and squashes the following commits:
b03a25f [Cheng Hao] simplify the testData instantiation
09b7e8b [Cheng Hao] move the testData into beforeAll()
This is a follow up for #6257, which broke the maven test.
Add cube & rollup for DataFrame
For example:
```scala
testData.rollup($"a" + $"b", $"b").agg(sum($"a" - $"b"))
testData.cube($"a" + $"b", $"b").agg(sum($"a" - $"b"))
```
Author: Cheng Hao <hao.cheng@intel.com>
Closes#6304 from chenghao-intel/rollup and squashes the following commits:
04bb1de [Cheng Hao] move the table register/unregister into beforeAll/afterAll
a6069f1 [Cheng Hao] cancel the implicit keyword
ced4b8f [Cheng Hao] remove the unnecessary code changes
9959dfa [Cheng Hao] update the code as comments
e1d88aa [Cheng Hao] update the code as suggested
03bc3d9 [Cheng Hao] Remove the CubedData & RollupedData
5fd62d0 [Cheng Hao] hiden the CubedData & RollupedData
5ffb196 [Cheng Hao] Add Cube / Rollup for dataframe
follow up for #5806
Author: scwf <wangfei1@huawei.com>
Closes#6164 from scwf/FunctionRegistry and squashes the following commits:
15e6697 [scwf] use catalogconf in FunctionRegistry
```
select explode(map(value, key)) from src;
```
Throws exception
```
org.apache.spark.sql.AnalysisException: The number of aliases supplied in the AS clause does not match the number of columns output by the UDTF expected 2 aliases but got _c0 ;
at org.apache.spark.sql.catalyst.analysis.CheckAnalysis$class.failAnalysis(CheckAnalysis.scala:38)
at org.apache.spark.sql.catalyst.analysis.Analyzer.failAnalysis(Analyzer.scala:43)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveGenerate$.org$apache$spark$sql$catalyst$analysis$Analyzer$ResolveGenerate$$makeGeneratorOutput(Analyzer.scala:605)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveGenerate$$anonfun$apply$16$$anonfun$22.apply(Analyzer.scala:562)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveGenerate$$anonfun$apply$16$$anonfun$22.apply(Analyzer.scala:548)
at scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:251)
at scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:251)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
at scala.collection.TraversableLike$class.flatMap(TraversableLike.scala:251)
at scala.collection.AbstractTraversable.flatMap(Traversable.scala:105)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveGenerate$$anonfun$apply$16.applyOrElse(Analyzer.scala:548)
at org.apache.spark.sql.catalyst.analysis.Analyzer$ResolveGenerate$$anonfun$apply$16.applyOrElse(Analyzer.scala:538)
at org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$3.apply(TreeNode.scala:222)
```
Author: Cheng Hao <hao.cheng@intel.com>
Closes#6178 from chenghao-intel/explode and squashes the following commits:
916fbe9 [Cheng Hao] add more strict rules for TGF alias
5c3f2c5 [Cheng Hao] fix bug in unit test
e1d93ab [Cheng Hao] Add more unit test
19db09e [Cheng Hao] resolve names for generator in projection
A follow-up to #6244.
Author: Michael Armbrust <michael@databricks.com>
Closes#6247 from marmbrus/fixOrcTests and squashes the following commits:
e39ee1b [Michael Armbrust] [SQL] Fix serializability of ORC table scan
Fix break caused by merging #6225 and #6194.
Author: Michael Armbrust <michael@databricks.com>
Closes#6244 from marmbrus/fixOrcBuildBreak and squashes the following commits:
b10e47b [Michael Armbrust] [HOTFIX] Fix ORC Build break
This PR introduces several performance optimizations to `HadoopFsRelation` and `ParquetRelation2`:
1. Moving `FileStatus` listing from `DataSourceStrategy` into a cache within `HadoopFsRelation`.
This new cache generalizes and replaces the one used in `ParquetRelation2`.
This also introduces an interface change: to reuse cached `FileStatus` objects, `HadoopFsRelation.buildScan` methods now receive `Array[FileStatus]` instead of `Array[String]`.
1. When Parquet task side metadata reading is enabled, skip reading row group information when reading Parquet footers.
This is basically what PR #5334 does. Also, now we uses `ParquetFileReader.readAllFootersInParallel` to read footers in parallel.
Another optimization in question is, instead of asking `HadoopFsRelation.buildScan` to return an `RDD[Row]` for a single selected partition and then union them all, we ask it to return an `RDD[Row]` for all selected partitions. This optimization is based on the fact that Hadoop configuration broadcasting used in `NewHadoopRDD` takes 34% time in the following microbenchmark. However, this complicates data source user code because user code must merge partition values manually.
To check the cost of broadcasting in `NewHadoopRDD`, I also did microbenchmark after removing the `broadcast` call in `NewHadoopRDD`. All results are shown below.
### Microbenchmark
#### Preparation code
Generating a partitioned table with 50k partitions, 1k rows per partition:
```scala
import sqlContext._
import sqlContext.implicits._
for (n <- 0 until 500) {
val data = for {
p <- (n * 10) until ((n + 1) * 10)
i <- 0 until 1000
} yield (i, f"val_$i%04d", f"$p%04d")
data.
toDF("a", "b", "p").
write.
partitionBy("p").
mode("append").
parquet(path)
}
```
#### Benchmarking code
```scala
import sqlContext._
import sqlContext.implicits._
import org.apache.spark.sql.types._
import com.google.common.base.Stopwatch
val path = "hdfs://localhost:9000/user/lian/5k"
def benchmark(n: Int)(f: => Unit) {
val stopwatch = new Stopwatch()
def run() = {
stopwatch.reset()
stopwatch.start()
f
stopwatch.stop()
stopwatch.elapsedMillis()
}
val records = (0 until n).map(_ => run())
(0 until n).foreach(i => println(s"Round $i: ${records(i)} ms"))
println(s"Average: ${records.sum / n.toDouble} ms")
}
benchmark(3) { read.parquet(path).explain(extended = true) }
```
#### Results
Before:
```
Round 0: 72528 ms
Round 1: 68938 ms
Round 2: 65372 ms
Average: 68946.0 ms
```
After:
```
Round 0: 59499 ms
Round 1: 53645 ms
Round 2: 53844 ms
Round 3: 49093 ms
Round 4: 50555 ms
Average: 53327.2 ms
```
Also removing Hadoop configuration broadcasting:
(Note that I was testing on a local laptop, thus network cost is pretty low.)
```
Round 0: 15806 ms
Round 1: 14394 ms
Round 2: 14699 ms
Round 3: 15334 ms
Round 4: 14123 ms
Average: 14871.2 ms
```
Author: Cheng Lian <lian@databricks.com>
Closes#6225 from liancheng/spark-7673 and squashes the following commits:
2d58a2b [Cheng Lian] Skips reading row group information when using task side metadata reading
7aa3748 [Cheng Lian] Optimizes FileStatusCache by introducing a map from parent directories to child files
ba41250 [Cheng Lian] Reuses HadoopFsRelation FileStatusCache in ParquetRelation2
3d278f7 [Cheng Lian] Fixes a bug when reading a single Parquet data file
b84612a [Cheng Lian] Fixes Scala style issue
6a08b02 [Cheng Lian] WIP: Moves file status cache into HadoopFSRelation
A modified version of https://github.com/apache/spark/pull/6110, use `semanticEquals` to make it more efficient.
Author: Wenchen Fan <cloud0fan@outlook.com>
Closes#6173 from cloud-fan/7269 and squashes the following commits:
e4a3cc7 [Wenchen Fan] address comments
cc02045 [Wenchen Fan] consider elements length equal
d7ff8f4 [Wenchen Fan] fix 7269
This PR updates PR #6135 authored by zhzhan from Hortonworks.
----
This PR implements a Spark SQL data source for accessing ORC files.
> **NOTE**
>
> Although ORC is now an Apache TLP, the codebase is still tightly coupled with Hive. That's why the new ORC data source is under `org.apache.spark.sql.hive` package, and must be used with `HiveContext`. However, it doesn't require existing Hive installation to access ORC files.
1. Saving/loading ORC files without contacting Hive metastore
1. Support for complex data types (i.e. array, map, and struct)
1. Aware of common optimizations provided by Spark SQL:
- Column pruning
- Partitioning pruning
- Filter push-down
1. Schema evolution support
1. Hive metastore table conversion
This PR also include initial work done by scwf from Huawei (PR #3753).
Author: Zhan Zhang <zhazhan@gmail.com>
Author: Cheng Lian <lian@databricks.com>
Closes#6194 from liancheng/polishing-orc and squashes the following commits:
55ecd96 [Cheng Lian] Reorganizes ORC test suites
d4afeed [Cheng Lian] Addresses comments
21ada22 [Cheng Lian] Adds @since and @Experimental annotations
128bd3b [Cheng Lian] ORC filter bug fix
d734496 [Cheng Lian] Polishes the ORC data source
2650a42 [Zhan Zhang] resolve review comments
3c9038e [Zhan Zhang] resolve review comments
7b3c7c5 [Zhan Zhang] save mode fix
f95abfd [Zhan Zhang] reuse test suite
7cc2c64 [Zhan Zhang] predicate fix
4e61c16 [Zhan Zhang] minor change
305418c [Zhan Zhang] orc data source support
Author: Michael Armbrust <michael@databricks.com>
Closes#6167 from marmbrus/configureIsolation and squashes the following commits:
6147cbe [Michael Armbrust] filter other conf
22cc3bc7 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into configureIsolation
07476ee [Michael Armbrust] filter empty prefixes
dfdf19c [Michael Armbrust] [SPARK-6906][SQL] Allow configuration of classloader isolation for hive
Also moved all the deprecated functions into one place for SQLContext and DataFrame, and updated tests to use the new API.
Author: Reynold Xin <rxin@databricks.com>
Closes#6210 from rxin/df-writer-reader-jdbc and squashes the following commits:
7465c2c [Reynold Xin] Fixed unit test.
118e609 [Reynold Xin] Updated tests.
3441b57 [Reynold Xin] Updated javadoc.
13cdd1c [Reynold Xin] [SPARK-7654][SQL] Move JDBC into DataFrame's reader/writer interface.
This patch introduces DataFrameWriter and DataFrameReader.
DataFrameReader interface, accessible through SQLContext.read, contains methods that create DataFrames. These methods used to reside in SQLContext. Example usage:
```scala
sqlContext.read.json("...")
sqlContext.read.parquet("...")
```
DataFrameWriter interface, accessible through DataFrame.write, implements a builder pattern to avoid the proliferation of options in writing DataFrame out. It currently implements:
- mode
- format (e.g. "parquet", "json")
- options (generic options passed down into data sources)
- partitionBy (partitioning columns)
Example usage:
```scala
df.write.mode("append").format("json").partitionBy("date").saveAsTable("myJsonTable")
```
TODO:
- [ ] Documentation update
- [ ] Move JDBC into reader / writer?
- [ ] Deprecate the old interfaces
- [ ] Move the generic load interface into reader.
- [ ] Update example code and documentation
Author: Reynold Xin <rxin@databricks.com>
Closes#6175 from rxin/reader-writer and squashes the following commits:
b146c95 [Reynold Xin] Deprecation of old APIs.
bd8abdf [Reynold Xin] Fixed merge conflict.
26abea2 [Reynold Xin] Added general load methods.
244fbec [Reynold Xin] Added equivalent to example.
4f15d92 [Reynold Xin] Added documentation for partitionBy.
7e91611 [Reynold Xin] [SPARK-7654][SQL] DataFrameReader and DataFrameWriter for input/output API.
for example:
table: src(key string, value string)
sql: with v1 as(select key, count(value) over (partition by key) cnt_val from src), v2 as(select v1.key, v1_lag.cnt_val from v1, v1 v1_lag where v1.key = v1_lag.key) select * from v2 limit 5;
then will analyze fail when resolving conflicting references in Join:
'Limit 5
'Project [*]
'Subquery v2
'Project ['v1.key,'v1_lag.cnt_val]
'Filter ('v1.key = 'v1_lag.key)
'Join Inner, None
Subquery v1
Project [key#95,cnt_val#94L]
Window [key#95,value#96], [HiveWindowFunction#org.apache.hadoop.hive.ql.udf.generic.GenericUDAFCount(value#96) WindowSpecDefinition [key#95], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING AS cnt_val#94L], WindowSpecDefinition [key#95], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING
Project [key#95,value#96]
MetastoreRelation default, src, None
Subquery v1_lag
Subquery v1
Project [key#97,cnt_val#94L]
Window [key#97,value#98], [HiveWindowFunction#org.apache.hadoop.hive.ql.udf.generic.GenericUDAFCount(value#98) WindowSpecDefinition [key#97], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING AS cnt_val#94L], WindowSpecDefinition [key#97], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING
Project [key#97,value#98]
MetastoreRelation default, src, None
Conflicting attributes: cnt_val#94L
Author: linweizhong <linweizhong@huawei.com>
Closes#6114 from Sephiroth-Lin/spark-7595 and squashes the following commits:
f8f2637 [linweizhong] Add unit test
dfe9169 [linweizhong] Handle windowExpression with self join
JavaTypeInference into catalyst
types.DateUtils into catalyst
CacheManager into execution
DefaultParserDialect into catalyst
Author: Reynold Xin <rxin@databricks.com>
Closes#6108 from rxin/sql-rename and squashes the following commits:
3fc9613 [Reynold Xin] Fixed import ordering.
83d9ff4 [Reynold Xin] Fixed codegen tests.
e271e86 [Reynold Xin] mima
f4e24a6 [Reynold Xin] [SQL] Move some classes into packages that are more appropriate.
This PR migrates Parquet data source to the newly introduced `FSBasedRelation`. `FSBasedParquetRelation` is created to replace `ParquetRelation2`. Major differences are:
1. Partition discovery code has been factored out to `FSBasedRelation`
1. `AppendingParquetOutputFormat` is not used now. Instead, an anonymous subclass of `ParquetOutputFormat` is used to handle appending and writing dynamic partitions
1. When scanning partitioned tables, `FSBasedParquetRelation.buildScan` only builds an `RDD[Row]` for a single selected partition
1. `FSBasedParquetRelation` doesn't rely on Catalyst expressions for filter push down, thus it doesn't extend `CatalystScan` anymore
After migrating `JSONRelation` (which extends `CatalystScan`), we can remove `CatalystScan`.
<!-- Reviewable:start -->
[<img src="https://reviewable.io/review_button.png" height=40 alt="Review on Reviewable"/>](https://reviewable.io/reviews/apache/spark/6090)
<!-- Reviewable:end -->
Author: Cheng Lian <lian@databricks.com>
Closes#6090 from liancheng/parquet-migration and squashes the following commits:
6063f87 [Cheng Lian] Casts to OutputCommitter rather than FileOutputCommtter
bfd1cf0 [Cheng Lian] Fixes compilation error introduced while rebasing
f9ea56e [Cheng Lian] Adds ParquetRelation2 related classes to MiMa check whitelist
261d8c1 [Cheng Lian] Minor bug fix and more tests
db65660 [Cheng Lian] Migrates Parquet data source to FSBasedRelation
Some third-party UDTF extensions generate additional rows in the "GenericUDTF.close()" method, which is supported / documented by Hive.
https://cwiki.apache.org/confluence/display/Hive/DeveloperGuide+UDTF
However, Spark SQL ignores the "GenericUDTF.close()", and it causes bug while porting job from Hive to Spark SQL.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#5383 from chenghao-intel/udtf_close and squashes the following commits:
98b4e4b [Cheng Hao] Support UDTF.close
Author: Cheng Lian <lian@databricks.com>
Closes#6123 from liancheng/remove-println and squashes the following commits:
03356b6 [Cheng Lian] Removes debugging println
This makes HiveContext.analyzer overrideable.
Author: Santiago M. Mola <santi@mola.io>
Closes#6086 from smola/patch-3 and squashes the following commits:
8ece136 [Santiago M. Mola] [SPARK-7566][SQL] Add type to HiveContext.analyzer
This pull request adds since tag to all public methods/classes in SQL/DataFrame to indicate which version the methods/classes were first added.
Author: Reynold Xin <rxin@databricks.com>
Closes#6101 from rxin/tbc and squashes the following commits:
ed55e11 [Reynold Xin] Add since version to all DataFrame methods.
This PR adds partitioning support for the external data sources API. It aims to simplify development of file system based data sources, and provide first class partitioning support for both read path and write path. Existing data sources like JSON and Parquet can be simplified with this work.
## New features provided
1. Hive compatible partition discovery
This actually generalizes the partition discovery strategy used in Parquet data source in Spark 1.3.0.
1. Generalized partition pruning optimization
Now partition pruning is handled during physical planning phase. Specific data sources don't need to worry about this harness anymore.
(This also implies that we can remove `CatalystScan` after migrating the Parquet data source, since now we don't need to pass Catalyst expressions to data source implementations.)
1. Insertion with dynamic partitions
When inserting data to a `FSBasedRelation`, data can be partitioned dynamically by specified partition columns.
## New structures provided
### Developer API
1. `FSBasedRelation`
Base abstract class for file system based data sources.
1. `OutputWriter`
Base abstract class for output row writers, responsible for writing a single row object.
1. `FSBasedRelationProvider`
A new relation provider for `FSBasedRelation` subclasses. Note that data sources extending `FSBasedRelation` don't need to extend `RelationProvider` and `SchemaRelationProvider`.
### User API
New overloaded versions of
1. `DataFrame.save()`
1. `DataFrame.saveAsTable()`
1. `SQLContext.load()`
are provided to allow users to save/load DataFrames with user defined dynamic partition columns.
### Spark SQL query planning
1. `InsertIntoFSBasedRelation`
Used to implement write path for `FSBasedRelation`s.
1. New rules for `FSBasedRelation` in `DataSourceStrategy`
These are added to hook `FSBasedRelation` into physical query plan in read path, and perform partition pruning.
## TODO
- [ ] Use scratch directories when overwriting a table with data selected from itself.
Currently, this is not supported, because the table been overwritten is always deleted before writing any data to it.
- [ ] When inserting with dynamic partition columns, use external sorter to group the data first.
This ensures that we only need to open a single `OutputWriter` at a time. For data sources like Parquet, `OutputWriter`s can be quite memory consuming. One issue is that, this approach breaks the row distribution in the original DataFrame. However, we did't promise to preserve data distribution when writing a DataFrame.
- [x] More tests. Specifically, test cases for
- [x] Self-join
- [x] Loading partitioned relations with a subset of partition columns stored in data files.
- [x] `SQLContext.load()` with user defined dynamic partition columns.
## Parquet data source migration
Parquet data source migration is covered in PR https://github.com/liancheng/spark/pull/6, which is against this PR branch and for preview only. A formal PR need to be made after this one is merged.
Author: Cheng Lian <lian@databricks.com>
Closes#5526 from liancheng/partitioning-support and squashes the following commits:
5351a1b [Cheng Lian] Fixes compilation error introduced while rebasing
1f9b1a5 [Cheng Lian] Tweaks data schema passed to FSBasedRelations
43ba50e [Cheng Lian] Avoids serializing generated projection code
edf49e7 [Cheng Lian] Removed commented stale code block
348a922 [Cheng Lian] Adds projection in FSBasedRelation.buildScan(requiredColumns, inputPaths)
ad4d4de [Cheng Lian] Enables HDFS style globbing
8d12e69 [Cheng Lian] Fixes compilation error
c71ac6c [Cheng Lian] Addresses comments from @marmbrus
7552168 [Cheng Lian] Fixes typo in MimaExclude.scala
0349e09 [Cheng Lian] Fixes compilation error introduced while rebasing
52b0c9b [Cheng Lian] Adjusts project/MimaExclude.scala
c466de6 [Cheng Lian] Addresses comments
bc3f9b4 [Cheng Lian] Uses projection to separate partition columns and data columns while inserting rows
795920a [Cheng Lian] Fixes compilation error after rebasing
0b8cd70 [Cheng Lian] Adds Scala/Catalyst row conversion when writing non-partitioned tables
fa543f3 [Cheng Lian] Addresses comments
5849dd0 [Cheng Lian] Fixes doc typos. Fixes partition discovery refresh.
51be443 [Cheng Lian] Replaces FSBasedRelation.outputCommitterClass with FSBasedRelation.prepareForWrite
c4ed4fe [Cheng Lian] Bug fixes and a new test suite
a29e663 [Cheng Lian] Bug fix: should only pass actuall data files to FSBaseRelation.buildScan
5f423d3 [Cheng Lian] Bug fixes. Lets data source to customize OutputCommitter rather than OutputFormat
54c3d7b [Cheng Lian] Enforces that FileOutputFormat must be used
be0c268 [Cheng Lian] Uses TaskAttempContext rather than Configuration in OutputWriter.init
0bc6ad1 [Cheng Lian] Resorts to new Hadoop API, and now FSBasedRelation can customize output format class
f320766 [Cheng Lian] Adds prepareForWrite() hook, refactored writer containers
422ff4a [Cheng Lian] Fixes style issue
ce52353 [Cheng Lian] Adds new SQLContext.load() overload with user defined dynamic partition columns
8d2ff71 [Cheng Lian] Merges partition columns when reading partitioned relations
ca1805b [Cheng Lian] Removes duplicated partition discovery code in new Parquet
f18dec2 [Cheng Lian] More strict schema checking
b746ab5 [Cheng Lian] More tests
9b487bf [Cheng Lian] Fixes compilation errors introduced while rebasing
ea6c8dd [Cheng Lian] Removes remote debugging stuff
327bb1d [Cheng Lian] Implements partitioning support for data sources API
3c5073a [Cheng Lian] Fixes SaveModes used in test cases
fb5a607 [Cheng Lian] Fixes compilation error
9d17607 [Cheng Lian] Adds the contract that OutputWriter should have zero-arg constructor
5de194a [Cheng Lian] Forgot Apache licence header
95d0b4d [Cheng Lian] Renames PartitionedSchemaRelationProvider to FSBasedRelationProvider
770b5ba [Cheng Lian] Adds tests for FSBasedRelation
3ba9bbf [Cheng Lian] Adds DataFrame.saveAsTable() overrides which support partitioning
1b8231f [Cheng Lian] Renames FSBasedPrunedFilteredScan to FSBasedRelation
aa8ba9a [Cheng Lian] Javadoc fix
012ed2d [Cheng Lian] Adds PartitioningOptions
7dd8dd5 [Cheng Lian] Adds new interfaces and stub methods for data sources API partitioning support
Author: Reynold Xin <rxin@databricks.com>
Closes#6071 from rxin/parserdialect and squashes the following commits:
ca2eb31 [Reynold Xin] Rename Dialect -> ParserDialect.
This is a follow up of #5876 and should be merged after #5876.
Let's wait for unit testing result from Jenkins.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#5963 from chenghao-intel/useIsolatedClient and squashes the following commits:
f87ace6 [Cheng Hao] remove the TODO and add `resolved condition` for HiveTable
a8260e8 [Cheng Hao] Update code as feedback
f4e243f [Cheng Hao] remove the serde setting for SequenceFile
d166afa [Cheng Hao] style issue
d25a4aa [Cheng Hao] Add SerDe support for CTAS
The DAG visualization currently displays only low-level Spark primitives (e.g. `map`, `reduceByKey`, `filter` etc.). For SQL, these aren't particularly useful. Instead, we should display higher level physical operators (e.g. `Filter`, `Exchange`, `ShuffleHashJoin`). cc marmbrus
-----------------
**Before**
<img src="https://issues.apache.org/jira/secure/attachment/12731586/before.png" width="600px"/>
-----------------
**After** (Pay attention to the words)
<img src="https://issues.apache.org/jira/secure/attachment/12731587/after.png" width="600px"/>
-----------------
Author: Andrew Or <andrew@databricks.com>
Closes#5999 from andrewor14/dag-viz-sql and squashes the following commits:
0db23a4 [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-sql
1e211db [Andrew Or] Update comment
0d49fd6 [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-sql
ffd237a [Andrew Or] Fix style
202dac1 [Andrew Or] Make ignoreParent false by default
e61b1ab [Andrew Or] Visualize SQL operators, not low-level Spark primitives
569034a [Andrew Or] Add a flag to ignore parent settings and scopes
It's the first step: generalize UnresolvedGetField to support all map, struct, and array
TODO: add `apply` in Scala and `__getitem__` in Python, and unify the `getItem` and `getField` methods to one single API(or should we keep them for compatibility?).
Author: Wenchen Fan <cloud0fan@outlook.com>
Closes#5744 from cloud-fan/generalize and squashes the following commits:
715c589 [Wenchen Fan] address comments
7ea5b31 [Wenchen Fan] fix python test
4f0833a [Wenchen Fan] add python test
f515d69 [Wenchen Fan] add apply method and test cases
8df6199 [Wenchen Fan] fix python test
239730c [Wenchen Fan] fix test compile
2a70526 [Wenchen Fan] use _bin_op in dataframe.py
6bf72bc [Wenchen Fan] address comments
3f880c3 [Wenchen Fan] add java doc
ab35ab5 [Wenchen Fan] fix python test
b5961a9 [Wenchen Fan] fix style
c9d85f5 [Wenchen Fan] generalize UnresolvedGetField to support all map, struct, and array
This PR switches Spark SQL's Hive support to use the isolated hive client interface introduced by #5851, instead of directly interacting with the client. By using this isolated client we can now allow users to dynamically configure the version of Hive that they are connecting to by setting `spark.sql.hive.metastore.version` without the need recompile. This also greatly reduces the surface area for our interaction with the hive libraries, hopefully making it easier to support other versions in the future.
Jars for the desired hive version can be configured using `spark.sql.hive.metastore.jars`, which accepts the following options:
- a colon-separated list of jar files or directories for hive and hadoop.
- `builtin` - attempt to discover the jars that were used to load Spark SQL and use those. This
option is only valid when using the execution version of Hive.
- `maven` - download the correct version of hive on demand from maven.
By default, `builtin` is used for Hive 13.
This PR also removes the test step for building against Hive 12, as this will no longer be required to talk to Hive 12 metastores. However, the full removal of the Shim is deferred until a later PR.
Remaining TODOs:
- Remove the Hive Shims and inline code for Hive 13.
- Several HiveCompatibility tests are not yet passing.
- `nullformatCTAS` - As detailed below, we now are handling CTAS parsing ourselves instead of hacking into the Hive semantic analyzer. However, we currently only handle the common cases and not things like CTAS where the null format is specified.
- `combine1` now leaks state about compression somehow, breaking all subsequent tests. As such we currently add it to the blacklist
- `part_inherit_tbl_props` and `part_inherit_tbl_props_with_star` do not work anymore. We are correctly propagating the information
- "load_dyn_part14.*" - These tests pass when run on their own, but fail when run with all other tests. It seems our `RESET` mechanism may not be as robust as it used to be?
Other required changes:
- `CreateTableAsSelect` no longer carries parts of the HiveQL AST with it through the query execution pipeline. Instead, we parse CTAS during the HiveQL conversion and construct a `HiveTable`. The full parsing here is not yet complete as detailed above in the remaining TODOs. Since the operator is Hive specific, it is moved to the hive package.
- `Command` is simplified to be a trait that simply acts as a marker for a LogicalPlan that should be eagerly evaluated.
Author: Michael Armbrust <michael@databricks.com>
Closes#5876 from marmbrus/useIsolatedClient and squashes the following commits:
258d000 [Michael Armbrust] really really correct path handling
e56fd4a [Michael Armbrust] getAbsolutePath
5a259f5 [Michael Armbrust] fix typos
81bb366 [Michael Armbrust] comments from vanzin
5f3945e [Michael Armbrust] Merge remote-tracking branch 'origin/master' into useIsolatedClient
4b5cd41 [Michael Armbrust] yin's comments
f5de7de [Michael Armbrust] cleanup
11e9c72 [Michael Armbrust] better coverage in versions suite
7e8f010 [Michael Armbrust] better error messages and jar handling
e7b3941 [Michael Armbrust] more permisive checking for function registration
da91ba7 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into useIsolatedClient
5fe5894 [Michael Armbrust] fix serialization suite
81711c4 [Michael Armbrust] Initial support for running without maven
1d8ae44 [Michael Armbrust] fix final tests?
1c50813 [Michael Armbrust] more comments
a3bee70 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into useIsolatedClient
a6f5df1 [Michael Armbrust] style
ab07f7e [Michael Armbrust] WIP
4d8bf02 [Michael Armbrust] Remove hive 12 compilation
8843a25 [Michael Armbrust] [SPARK-6908] [SQL] Use isolated Hive client
Avoid translating to CaseWhen and evaluate the key expression many times.
Author: Wenchen Fan <cloud0fan@outlook.com>
Closes#5979 from cloud-fan/condition and squashes the following commits:
3ce54e1 [Wenchen Fan] add CaseKeyWhen
This is a follow up of #5827 to remove the additional `SparkSQLParser`
Author: Cheng Hao <hao.cheng@intel.com>
Closes#5965 from chenghao-intel/remove_sparksqlparser and squashes the following commits:
509a233 [Cheng Hao] Remove the HiveQlQueryExecution
a5f9e3b [Cheng Hao] Remove the duplicated SparkSQLParser
Author: Yin Huai <yhuai@databricks.com>
Closes#5951 from yhuai/fixBuildMaven and squashes the following commits:
fdde183 [Yin Huai] Move HiveWindowFunctionQuerySuite.scala to hive compatibility dir.
Adding more information about the implementation...
This PR is adding the support of window functions to Spark SQL (specifically OVER and WINDOW clause). For every expression having a OVER clause, we use a WindowExpression as the container of a WindowFunction and the corresponding WindowSpecDefinition (the definition of a window frame, i.e. partition specification, order specification, and frame specification appearing in a OVER clause).
# Implementation #
The high level work flow of the implementation is described as follows.
* Query parsing: In the query parse process, all WindowExpressions are originally placed in the projectList of a Project operator or the aggregateExpressions of an Aggregate operator. It makes our changes to simple and keep all of parsing rules for window functions at a single place (nodesToWindowSpecification). For the WINDOWclause in a query, we use a WithWindowDefinition as the container as the mapping from the name of a window specification to a WindowSpecDefinition. This changes is similar with our common table expression support.
* Analysis: The query analysis process has three steps for window functions.
* Resolve all WindowSpecReferences by replacing them with WindowSpecReferences according to the mapping table stored in the node of WithWindowDefinition.
* Resolve WindowFunctions in the projectList of a Project operator or the aggregateExpressions of an Aggregate operator. For this PR, we use Hive's functions for window functions because we will have a major refactoring of our internal UDAFs and it is better to switch our UDAFs after that refactoring work.
* Once we have resolved all WindowFunctions, we will use ResolveWindowFunction to extract WindowExpressions from projectList and aggregateExpressions and then create a Window operator for every distinct WindowSpecDefinition. With this choice, at the execution time, we can rely on the Exchange operator to do all of work on reorganizing the table and we do not need to worry about it in the physical Window operator. An example analyzed plan is shown as follows
```
sql("""
SELECT
year, country, product, sales,
avg(sales) over(partition by product) avg_product,
sum(sales) over(partition by country) sum_country
FROM sales
ORDER BY year, country, product
""").explain(true)
== Analyzed Logical Plan ==
Sort [year#34 ASC,country#35 ASC,product#36 ASC], true
Project [year#34,country#35,product#36,sales#37,avg_product#27,sum_country#28]
Window [year#34,country#35,product#36,sales#37,avg_product#27], [HiveWindowFunction#org.apache.hadoop.hive.ql.udf.generic.GenericUDAFSum(sales#37) WindowSpecDefinition [country#35], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING AS sum_country#28], WindowSpecDefinition [country#35], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING
Window [year#34,country#35,product#36,sales#37], [HiveWindowFunction#org.apache.hadoop.hive.ql.udf.generic.GenericUDAFAverage(sales#37) WindowSpecDefinition [product#36], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING AS avg_product#27], WindowSpecDefinition [product#36], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING
Project [year#34,country#35,product#36,sales#37]
MetastoreRelation default, sales, None
```
* Query planning: In the process of query planning, we simple generate the physical Window operator based on the logical Window operator. Then, to prepare the executedPlan, the EnsureRequirements rule will add Exchange and Sort operators if necessary. The EnsureRequirements rule will analyze the data properties and try to not add unnecessary shuffle and sort. The physical plan for the above example query is shown below.
```
== Physical Plan ==
Sort [year#34 ASC,country#35 ASC,product#36 ASC], true
Exchange (RangePartitioning [year#34 ASC,country#35 ASC,product#36 ASC], 200), []
Window [year#34,country#35,product#36,sales#37,avg_product#27], [HiveWindowFunction#org.apache.hadoop.hive.ql.udf.generic.GenericUDAFSum(sales#37) WindowSpecDefinition [country#35], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING AS sum_country#28], WindowSpecDefinition [country#35], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING
Exchange (HashPartitioning [country#35], 200), [country#35 ASC]
Window [year#34,country#35,product#36,sales#37], [HiveWindowFunction#org.apache.hadoop.hive.ql.udf.generic.GenericUDAFAverage(sales#37) WindowSpecDefinition [product#36], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING AS avg_product#27], WindowSpecDefinition [product#36], [], ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING
Exchange (HashPartitioning [product#36], 200), [product#36 ASC]
HiveTableScan [year#34,country#35,product#36,sales#37], (MetastoreRelation default, sales, None), None
```
* Execution time: At execution time, a physical Window operator buffers all rows in a partition specified in the partition spec of a OVER clause. If necessary, it also maintains a sliding window frame. The current implementation tries to buffer the input parameters of a window function according to the window frame to avoid evaluating a row multiple times.
# Future work #
Here are three improvements that are not hard to add:
* Taking advantage of the window frame specification to reduce the number of rows buffered in the physical Window operator. For some cases, we only need to buffer the rows appearing in the sliding window. But for other cases, we will not be able to reduce the number of rows buffered (e.g. ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING).
* When aRAGEN frame is used, for <value> PRECEDING and <value> FOLLOWING, it will be great if the <value> part is an expression (we can start with Literal). So, when the data type of ORDER BY expression is a FractionalType, we can support FractionalType as the type <value> (<value> still needs to be evaluated as a positive value).
* When aRAGEN frame is used, we need to support DateType and TimestampType as the data type of the expression appearing in the order specification. Then, the <value> part of <value> PRECEDING and <value> FOLLOWING can support interval types (once we support them).
This is a joint work with guowei2 and yhuai
Thanks hbutani hvanhovell for his comments
Thanks scwf for his comments and unit tests
Author: Yin Huai <yhuai@databricks.com>
Closes#5604 from guowei2/windowImplement and squashes the following commits:
76fe1c8 [Yin Huai] Implementation.
aa2b0ae [Yin Huai] Tests.
See the comment in join function for more information.
Author: Reynold Xin <rxin@databricks.com>
Closes#5919 from rxin/self-join-resolve and squashes the following commits:
e2fb0da [Reynold Xin] Updated SQLConf comment.
7233a86 [Reynold Xin] Updated comment.
6be2b4d [Reynold Xin] Removed println
9f6b72f [Reynold Xin] [SPARK-6231][SQL/DF] Automatically resolve ambiguity in join condition for self-joins.
This PR adds initial support for loading multiple versions of Hive in a single JVM and provides a common interface for extracting metadata from the `HiveMetastoreClient` for a given version. This is accomplished by creating an isolated `ClassLoader` that operates according to the following rules:
- __Shared Classes__: Java, Scala, logging, and Spark classes are delegated to `baseClassLoader`
allowing the results of calls to the `ClientInterface` to be visible externally.
- __Hive Classes__: new instances are loaded from `execJars`. These classes are not
accessible externally due to their custom loading.
- __Barrier Classes__: Classes such as `ClientWrapper` are defined in Spark but must link to a specific version of Hive. As a result, the bytecode is acquired from the Spark `ClassLoader` but a new copy is created for each instance of `IsolatedClientLoader`.
This new instance is able to see a specific version of hive without using reflection where ever hive is consistent across versions. Since
this is a unique instance, it is not visible externally other than as a generic
`ClientInterface`, unless `isolationOn` is set to `false`.
In addition to the unit tests, I have also tested this locally against mysql instances of the Hive Metastore. I've also successfully ported Spark SQL to run with this client, but due to the size of the changes, that will come in a follow-up PR.
By default, Hive jars are currently downloaded from Maven automatically for a given version to ease packaging and testing. However, there is also support for specifying their location manually for deployments without internet.
Author: Michael Armbrust <michael@databricks.com>
Closes#5851 from marmbrus/isolatedClient and squashes the following commits:
c72f6ac [Michael Armbrust] rxins comments
1e271fa [Michael Armbrust] [SPARK-6907][SQL] Isolated client for HiveMetastore
based on #4015, we should not delete `sqlParser` from sqlcontext, that leads to mima failed. Users implement dialect to give a fallback for `sqlParser` and we should construct `sqlParser` in sqlcontext according to the dialect
`protected[sql] val sqlParser = new SparkSQLParser(getSQLDialect().parse(_))`
Author: Cheng Hao <hao.cheng@intel.com>
Author: scwf <wangfei1@huawei.com>
Closes#5827 from scwf/sqlparser1 and squashes the following commits:
81b9737 [scwf] comment fix
0878bd1 [scwf] remove comments
c19780b [scwf] fix mima tests
c2895cf [scwf] Merge branch 'master' of https://github.com/apache/spark into sqlparser1
493775c [Cheng Hao] update the code as feedback
81a731f [Cheng Hao] remove the unecessary comment
aab0b0b [Cheng Hao] polish the code a little bit
49b9d81 [Cheng Hao] shrink the comment for rebasing
At least in the version of Hive I tested on, the test was deleting
a temp directory generated by Hive instead of one containing partition
data. So fix the filter to only consider partition directories when
deciding what to delete.
Author: Marcelo Vanzin <vanzin@cloudera.com>
Closes#5854 from vanzin/hive-test-fix and squashes the following commits:
7594ae9 [Marcelo Vanzin] Fix typo.
729fa80 [Marcelo Vanzin] [minor] [hive] Fix QueryPartitionSuite.
Adds the functions `rand` (Uniform Dist) and `randn` (Normal Dist.) as expressions to DataFrames.
cc mengxr rxin
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#5819 from brkyvz/df-rng and squashes the following commits:
50d69d4 [Burak Yavuz] add seed for test that failed
4234c3a [Burak Yavuz] fix Rand expression
13cad5c [Burak Yavuz] couple fixes
7d53953 [Burak Yavuz] waiting for hive tests
b453716 [Burak Yavuz] move radn with seed down
03637f0 [Burak Yavuz] fix broken hive func
c5909eb [Burak Yavuz] deleted old implementation of Rand
6d43895 [Burak Yavuz] implemented random generators
This PR aims to make the SQL Parser Pluggable, and user can register it's own parser via Spark SQL CLI.
```
# add the jar into the classpath
$hchengmydesktop:spark>bin/spark-sql --jars sql99.jar
-- switch to "hiveql" dialect
spark-sql>SET spark.sql.dialect=hiveql;
spark-sql>SELECT * FROM src LIMIT 1;
-- switch to "sql" dialect
spark-sql>SET spark.sql.dialect=sql;
spark-sql>SELECT * FROM src LIMIT 1;
-- switch to a custom dialect
spark-sql>SET spark.sql.dialect=com.xxx.xxx.SQL99Dialect;
spark-sql>SELECT * FROM src LIMIT 1;
-- register the non-exist SQL dialect
spark-sql> SET spark.sql.dialect=NotExistedClass;
spark-sql> SELECT * FROM src LIMIT 1;
-- Exception will be thrown and switch to default sql dialect ("sql" for SQLContext and "hiveql" for HiveContext)
```
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4015 from chenghao-intel/sqlparser and squashes the following commits:
493775c [Cheng Hao] update the code as feedback
81a731f [Cheng Hao] remove the unecessary comment
aab0b0b [Cheng Hao] polish the code a little bit
49b9d81 [Cheng Hao] shrink the comment for rebasing
This is built on top of kaka1992 's PR #5711 using Logical plans.
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#5761 from brkyvz/random-sample and squashes the following commits:
a1fb0aa [Burak Yavuz] remove unrelated file
69669c3 [Burak Yavuz] fix broken test
1ddb3da [Burak Yavuz] copy base
6000328 [Burak Yavuz] added python api and fixed test
3c11d1b [Burak Yavuz] fixed broken test
f400ade [Burak Yavuz] fix build errors
2384266 [Burak Yavuz] addressed comments v0.1
e98ebac [Burak Yavuz] [SPARK-7156][SQL] support RandomSplit in DataFrames
Coalesce and repartition now show up as part of the query plan, rather than resulting in a new `DataFrame`.
cc rxin
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#5762 from brkyvz/df-repartition and squashes the following commits:
b1e76dd [Burak Yavuz] added documentation on repartitions
5807e35 [Burak Yavuz] renamed coalescepartitions
fa4509f [Burak Yavuz] rename coalesce
2c349b5 [Burak Yavuz] address comments
f2e6af1 [Burak Yavuz] add ticks
686c90b [Burak Yavuz] made coalesce and repartition a part of the query plan
Update Maven build plugin versions and centralize plugin version management
Author: Sean Owen <sowen@cloudera.com>
Closes#5720 from srowen/SPARK-7168 and squashes the following commits:
98a8947 [Sean Owen] Make install, deploy plugin versions explicit
4ecf3b2 [Sean Owen] Update Maven build plugin versions and centralize plugin version management
Remove use of commons-lang in favor of commons-lang3 classes; remove commons-io use in favor of Guava
Author: Sean Owen <sowen@cloudera.com>
Closes#5703 from srowen/SPARK-7145 and squashes the following commits:
21fbe03 [Sean Owen] Remove use of commons-lang in favor of commons-lang3 classes; remove commons-io use in favor of Guava
according liancheng‘s comment in https://issues.apache.org/jira/browse/SPARK-6505, this patch remove the reflection call in HiveFunctionWrapper, and implement the functions named "deserializeObjectByKryo" and "serializeObjectByKryo" according the functions with the save name in
org.apache.hadoop.hive.ql.exec.Utilities.java
Author: baishuo <vc_java@hotmail.com>
Closes#5660 from baishuo/SPARK-6505-20150423 and squashes the following commits:
ae61ec4 [baishuo] modify code style
78d9fa3 [baishuo] modify code style
0b522a7 [baishuo] modify code style
a5ff9c7 [baishuo] Remove the reflection call in HiveFunctionWrapper
rename DataTypeParser.apply to DataTypeParser.parse to make it more clear and readable.
/cc rxin
Author: wangfei <wangfei1@huawei.com>
Closes#5710 from scwf/apply and squashes the following commits:
c319977 [wangfei] rename apply to parse
This is a reopening of #4867.
A short summary of the issues resolved from the previous PR:
1. HTTPClient version mismatch: Selenium (used for UI tests) requires version 4.3.x, and Tachyon included 4.2.5 through a transitive dependency of its shaded thrift jar. To address this, Tachyon 0.6.3 will promote the transitive dependencies of the shaded jar so they can be excluded in spark.
2. Jackson-Mapper-ASL version mismatch: In lower versions of hadoop-client (ie. 1.0.4), version 1.0.1 is included. The parquet library used in spark sql requires version 1.8+. Its unclear to me why upgrading tachyon-client would cause this dependency to break. The solution was to exclude jackson-mapper-asl from hadoop-client.
It seems that the dependency management in spark-parent will not work on transitive dependencies, one way to make sure jackson-mapper-asl is included with the correct version is to add it as a top level dependency. The best solution would be to exclude the dependency in the modules which require a higher version, but that did not fix the unit tests. Any suggestions on the best way to solve this would be appreciated!
Author: Calvin Jia <jia.calvin@gmail.com>
Closes#5354 from calvinjia/upgrade_tachyon_0.6.3 and squashes the following commits:
0eefe4d [Calvin Jia] Handle httpclient version in maven dependency management. Remove httpclient version setting from profiles.
7c00dfa [Calvin Jia] Set httpclient version to 4.3.2 for selenium. Specify version of httpclient for sql/hive (previously 4.2.5 transitive dependency of libthrift).
9263097 [Calvin Jia] Merge master to test latest changes
dbfc1bd [Calvin Jia] Use Tachyon 0.6.4 for cleaner dependencies.
e2ff80a [Calvin Jia] Exclude the jetty and curator promoted dependencies from tachyon-client.
a3a29da [Calvin Jia] Update tachyon-client exclusions.
0ae6c97 [Calvin Jia] Change tachyon version to 0.6.3
a204df9 [Calvin Jia] Update make distribution tachyon version.
a93c94f [Calvin Jia] Exclude jackson-mapper-asl from hadoop client since it has a lower version than spark's expected version.
a8a923c [Calvin Jia] Exclude httpcomponents from Tachyon
910fabd [Calvin Jia] Update to master
eed9230 [Calvin Jia] Update tachyon version to 0.6.1.
11907b3 [Calvin Jia] Use TachyonURI for tachyon paths instead of strings.
71bf441 [Calvin Jia] Upgrade Tachyon client version to 0.6.0.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#5625 from chenghao-intel/transform and squashes the following commits:
5ec1dd2 [Cheng Hao] fix the deadlock issue in ScriptTransform
I was looking at the code gen code and got confused by a few of use cases of apply, in particular apply on objects. So I went ahead and changed a few of them. Hopefully slightly more clear with a proper verb.
Author: Reynold Xin <rxin@databricks.com>
Closes#5624 from rxin/apply-rename and squashes the following commits:
ee45034 [Reynold Xin] [SQL] Rename some apply functions.
It's a bug while do query like:
```sql
select d from (select explode(array(1,1)) d from src limit 1) t
```
And it will throws exception like:
```
org.apache.spark.sql.AnalysisException: cannot resolve 'd' given input columns _c0; line 1 pos 7
at org.apache.spark.sql.catalyst.analysis.package$AnalysisErrorAt.failAnalysis(package.scala:42)
at org.apache.spark.sql.catalyst.analysis.CheckAnalysis$$anonfun$apply$3$$anonfun$apply$1.applyOrElse(CheckAnalysis.scala:48)
at org.apache.spark.sql.catalyst.analysis.CheckAnalysis$$anonfun$apply$3$$anonfun$apply$1.applyOrElse(CheckAnalysis.scala:45)
at org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$transformUp$1.apply(TreeNode.scala:250)
at org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$transformUp$1.apply(TreeNode.scala:250)
at org.apache.spark.sql.catalyst.trees.CurrentOrigin$.withOrigin(TreeNode.scala:50)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformUp(TreeNode.scala:249)
at org.apache.spark.sql.catalyst.plans.QueryPlan.org$apache$spark$sql$catalyst$plans$QueryPlan$$transformExpressionUp$1(QueryPlan.scala:103)
at org.apache.spark.sql.catalyst.plans.QueryPlan$$anonfun$2$$anonfun$apply$2.apply(QueryPlan.scala:117)
at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:244)
at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:244)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
at scala.collection.TraversableLike$class.map(TraversableLike.scala:244)
at scala.collection.AbstractTraversable.map(Traversable.scala:105)
at org.apache.spark.sql.catalyst.plans.QueryPlan$$anonfun$2.apply(QueryPlan.scala:116)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:328)
```
To solve the bug, it requires code refactoring for UDTF
The major changes are about:
* Simplifying the UDTF development, UDTF will manage the output attribute names any more, instead, the `logical.Generate` will handle that properly.
* UDTF will be asked for the output schema (data types) during the logical plan analyzing.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4602 from chenghao-intel/explode_bug and squashes the following commits:
c2a5132 [Cheng Hao] add back resolved for Alias
556e982 [Cheng Hao] revert the unncessary change
002c361 [Cheng Hao] change the rule of resolved for Generate
04ae500 [Cheng Hao] add qualifier only for generator output
5ee5d2c [Cheng Hao] prepend the new qualifier
d2e8b43 [Cheng Hao] Update the code as feedback
ca5e7f4 [Cheng Hao] shrink the commits
https://issues.apache.org/jira/browse/SPARK-6969
Author: Yin Huai <yhuai@databricks.com>
Closes#5583 from yhuai/refreshTableRefreshDataCache and squashes the following commits:
1e5142b [Yin Huai] Add todo.
92b2498 [Yin Huai] Minor updates.
367df92 [Yin Huai] Recache data in the command of REFRESH TABLE.
Thanks for the initial work from Ishiihara in #3173
This PR introduce a new join method of sort merge join, which firstly ensure that keys of same value are in the same partition, and inside each partition the Rows are sorted by key. Then we can run down both sides together, find matched rows using [sort merge join](http://en.wikipedia.org/wiki/Sort-merge_join). In this way, we don't have to store the whole hash table of one side as hash join, thus we have less memory usage. Also, this PR would benefit from #3438 , making the sorting phrase much more efficient.
We introduced a new configuration of "spark.sql.planner.sortMergeJoin" to switch between this(`true`) and ShuffledHashJoin(`false`), probably we want the default value of it be `false` at first.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Author: Michael Armbrust <michael@databricks.com>
This patch had conflicts when merged, resolved by
Committer: Michael Armbrust <michael@databricks.com>
Closes#5208 from adrian-wang/smj and squashes the following commits:
2493b9f [Daoyuan Wang] fix style
5049d88 [Daoyuan Wang] propagate rowOrdering for RangePartitioning
f91a2ae [Daoyuan Wang] yin's comment: use external sort if option is enabled, add comments
f515cd2 [Daoyuan Wang] yin's comment: outputOrdering, join suite refine
ec8061b [Daoyuan Wang] minor change
413fd24 [Daoyuan Wang] Merge pull request #3 from marmbrus/pr/5208
952168a [Michael Armbrust] add type
5492884 [Michael Armbrust] copy when ordering
7ddd656 [Michael Armbrust] Cleanup addition of ordering requirements
b198278 [Daoyuan Wang] inherit ordering in project
c8e82a3 [Daoyuan Wang] fix style
6e897dd [Daoyuan Wang] hide boundReference from manually construct RowOrdering for key compare in smj
8681d73 [Daoyuan Wang] refactor Exchange and fix copy for sorting
2875ef2 [Daoyuan Wang] fix changed configuration
61d7f49 [Daoyuan Wang] add omitted comment
00a4430 [Daoyuan Wang] fix bug
078d69b [Daoyuan Wang] address comments: add comments, do sort in shuffle, and others
3af6ba5 [Daoyuan Wang] use buffer for only one side
171001f [Daoyuan Wang] change default outputordering
47455c9 [Daoyuan Wang] add apache license ...
a28277f [Daoyuan Wang] fix style
645c70b [Daoyuan Wang] address comments using sort
068c35d [Daoyuan Wang] fix new style and add some tests
925203b [Daoyuan Wang] address comments
07ce92f [Daoyuan Wang] fix ArrayIndexOutOfBound
42fca0e [Daoyuan Wang] code clean
e3ec096 [Daoyuan Wang] fix comment style..
2edd235 [Daoyuan Wang] fix outputpartitioning
57baa40 [Daoyuan Wang] fix sort eval bug
303b6da [Daoyuan Wang] fix several errors
95db7ad [Daoyuan Wang] fix brackets for if-statement
4464f16 [Daoyuan Wang] fix error
880d8e9 [Daoyuan Wang] sort merge join for spark sql
Even if we wrap column names in backticks like `` `a#$b.c` ``, we still handle the "." inside column name specially. I think it's fragile to use a special char to split name parts, why not put name parts in `UnresolvedAttribute` directly?
Author: Wenchen Fan <cloud0fan@outlook.com>
This patch had conflicts when merged, resolved by
Committer: Michael Armbrust <michael@databricks.com>
Closes#5511 from cloud-fan/6898 and squashes the following commits:
48e3e57 [Wenchen Fan] more style fix
820dc45 [Wenchen Fan] do not ignore newName in UnresolvedAttribute
d81ad43 [Wenchen Fan] fix style
11699d6 [Wenchen Fan] completely support special chars in column names
This PR change the internal representation for StringType from java.lang.String to UTF8String, which is implemented use ArrayByte.
This PR should not break any public API, Row.getString() will still return java.lang.String.
This is the first step of improve the performance of String in SQL.
cc rxin
Author: Davies Liu <davies@databricks.com>
Closes#5350 from davies/string and squashes the following commits:
3b7bfa8 [Davies Liu] fix schema of AddJar
2772f0d [Davies Liu] fix new test failure
6d776a9 [Davies Liu] Merge branch 'master' of github.com:apache/spark into string
59025c8 [Davies Liu] address comments from @marmbrus
341ec2c [Davies Liu] turn off scala style check in UTF8StringSuite
744788f [Davies Liu] Merge branch 'master' of github.com:apache/spark into string
b04a19c [Davies Liu] add comment for getString/setString
08d897b [Davies Liu] Merge branch 'master' of github.com:apache/spark into string
5116b43 [Davies Liu] rollback unrelated changes
1314a37 [Davies Liu] address comments from Yin
867bf50 [Davies Liu] fix String filter push down
13d9d42 [Davies Liu] Merge branch 'master' of github.com:apache/spark into string
2089d24 [Davies Liu] add hashcode check back
ac18ae6 [Davies Liu] address comment
fd11364 [Davies Liu] optimize UTF8String
8d17f21 [Davies Liu] fix hive compatibility tests
e5fa5b8 [Davies Liu] remove clone in UTF8String
28f3d81 [Davies Liu] Merge branch 'master' of github.com:apache/spark into string
28d6f32 [Davies Liu] refactor
537631c [Davies Liu] some comment about Date
9f4c194 [Davies Liu] convert data type for data source
956b0a4 [Davies Liu] fix hive tests
73e4363 [Davies Liu] Merge branch 'master' of github.com:apache/spark into string
9dc32d1 [Davies Liu] fix some hive tests
23a766c [Davies Liu] refactor
8b45864 [Davies Liu] fix codegen with UTF8String
bb52e44 [Davies Liu] fix scala style
c7dd4d2 [Davies Liu] fix some catalyst tests
38c303e [Davies Liu] fix python sql tests
5f9e120 [Davies Liu] fix sql tests
6b499ac [Davies Liu] fix style
a85fb27 [Davies Liu] refactor
d32abd1 [Davies Liu] fix utf8 for python api
4699c3a [Davies Liu] use Array[Byte] in UTF8String
21f67c6 [Davies Liu] cleanup
685fd07 [Davies Liu] use UTF8String instead of String for StringType
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#4586 from adrian-wang/addjar and squashes the following commits:
efdd602 [Daoyuan Wang] move jar to another place
6c707e8 [Daoyuan Wang] restrict hive version for test
32c4fb8 [Daoyuan Wang] fix style and add a test
9957d87 [Daoyuan Wang] use sessionstate classloader in makeRDDforTable
0810e71 [Daoyuan Wang] remove variable substitution
1898309 [Daoyuan Wang] fix classnotfound
95a40da [Daoyuan Wang] support env argus in add jar, and set add jar ret to 0
In `leftsemijoin.q`, there is a data loading command for table `sales` already, but in `TestHive`, it also created the table `sales`, which causes duplicated records inserted into the `sales`.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4506 from chenghao-intel/df_table and squashes the following commits:
0be05f7 [Cheng Hao] Remove the table `sales` creating from TestHive
[SHOW PRINCIPALS role_name]
Lists all roles and users who belong to this role.
Only the admin role has privilege for this.
[SHOW COMPACTIONS]
It returns a list of all tables and partitions currently being compacted or scheduled for compaction when Hive transactions are being used.
[SHOW TRANSACTIONS]
It is for use by administrators when Hive transactions are being used. It returns a list of all currently open and aborted transactions in the system.
Author: DoingDone9 <799203320@qq.com>
Author: Zhongshuai Pei <799203320@qq.com>
Author: Xu Tingjun <xutingjun@huawei.com>
Closes#4902 from DoingDone9/SHOW_PRINCIPALS and squashes the following commits:
4add42f [Zhongshuai Pei] for test
311f806 [Zhongshuai Pei] for test
0c7550a [DoingDone9] Update HiveQl.scala
c8aeb1c [Xu Tingjun] aa
802261c [DoingDone9] Merge pull request #7 from apache/master
d00303b [DoingDone9] Merge pull request #6 from apache/master
98b134f [DoingDone9] Merge pull request #5 from apache/master
161cae3 [DoingDone9] Merge pull request #4 from apache/master
c87e8b6 [DoingDone9] Merge pull request #3 from apache/master
cb1852d [DoingDone9] Merge pull request #2 from apache/master
c3f046f [DoingDone9] Merge pull request #1 from apache/master
This PR follow up PR #3907 & #3891 & #4356.
According to marmbrus liancheng 's comments, I try to use fs.globStatus to retrieve all FileStatus objects under path(s), and then do the filtering locally.
[1]. get pathPattern by path, and put it into pathPatternSet. (hdfs://cluster/user/demo/2016/08/12 -> hdfs://cluster/user/demo/*/*/*)
[2]. retrieve all FileStatus objects ,and cache them by undating existPathSet.
[3]. do the filtering locally
[4]. if we have new pathPattern,do 1,2 step again. (external table maybe have more than one partition pathPattern)
chenghao-intel jeanlyn
Author: lazymam500 <lazyman500@gmail.com>
Author: lazyman <lazyman500@gmail.com>
Closes#5059 from lazyman500/SPARK-5068 and squashes the following commits:
5bfcbfd [lazyman] move spark.sql.hive.verifyPartitionPath to SQLConf,fix scala style
e1d6386 [lazymam500] fix scala style
f23133f [lazymam500] bug fix
47e0023 [lazymam500] fix scala style,add config flag,break the chaining
04c443c [lazyman] SPARK-5068: fix bug when partition path doesn't exists #2
41f60ce [lazymam500] Merge pull request #1 from apache/master
Author: haiyang <huhaiyang@huawei.com>
Closes#4929 from haiyangsea/cte and squashes the following commits:
220b67d [haiyang] add golden files for cte test
d3c7681 [haiyang] Merge branch 'master' into cte-repair
0ba2070 [haiyang] modify code style
9ce6b58 [haiyang] fix conflict
ff74741 [haiyang] add comment for With plan
0d56af4 [haiyang] code indention
776a440 [haiyang] add comments for resolve relation strategy
2fccd7e [haiyang] add comments for resolve relation strategy
241bbe2 [haiyang] fix cte problem of view
e9e1237 [haiyang] fix test case problem
614182f [haiyang] add test cases for CTE feature
32e415b [haiyang] add comment
1cc8c15 [haiyang] support with
03f1097 [haiyang] support with
e960099 [haiyang] support with
9aaa874 [haiyang] support with
0566978 [haiyang] support with
a99ecd2 [haiyang] support with
c3fa4c2 [haiyang] support with
3b6077f [haiyang] support with
5f8abe3 [haiyang] support with
4572b05 [haiyang] support with
f801f54 [haiyang] support with
```SQL
select key, v from src lateral view stack(3, 1+1, 2+2, 3) d as v;
```
Will cause exception
```
java.lang.ClassNotFoundException: stack
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
at org.apache.spark.sql.hive.HiveFunctionWrapper.createFunction(Shim13.scala:148)
at org.apache.spark.sql.hive.HiveGenericUdtf.function$lzycompute(hiveUdfs.scala:274)
at org.apache.spark.sql.hive.HiveGenericUdtf.function(hiveUdfs.scala:274)
at org.apache.spark.sql.hive.HiveGenericUdtf.outputInspector$lzycompute(hiveUdfs.scala:280)
at org.apache.spark.sql.hive.HiveGenericUdtf.outputInspector(hiveUdfs.scala:280)
at org.apache.spark.sql.hive.HiveGenericUdtf.outputDataTypes$lzycompute(hiveUdfs.scala:285)
at org.apache.spark.sql.hive.HiveGenericUdtf.outputDataTypes(hiveUdfs.scala:285)
at org.apache.spark.sql.hive.HiveGenericUdtf.makeOutput(hiveUdfs.scala:291)
at org.apache.spark.sql.catalyst.expressions.Generator.output(generators.scala:60)
at org.apache.spark.sql.catalyst.plans.logical.Generate$$anonfun$2.apply(basicOperators.scala:60)
at org.apache.spark.sql.catalyst.plans.logical.Generate$$anonfun$2.apply(basicOperators.scala:60)
at scala.Option.map(Option.scala:145)
at org.apache.spark.sql.catalyst.plans.logical.Generate.generatorOutput(basicOperators.scala:60)
at org.apache.spark.sql.catalyst.plans.logical.Generate.output(basicOperators.scala:70)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolveChildren$1.apply(LogicalPlan.scala:117)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolveChildren$1.apply(LogicalPlan.scala:117)
```
Author: Cheng Hao <hao.cheng@intel.com>
Closes#5444 from chenghao-intel/hive_udtf and squashes the following commits:
065a98c [Cheng Hao] fix bug of Hive UDTF in Lateral View (ClassNotFound)
Otherwise we end up rewriting predicates to be trivially equal (i.e. `a#1 = a#2` -> `a#3 = a#3`), at which point the query is no longer valid.
Author: Michael Armbrust <michael@databricks.com>
Closes#5458 from marmbrus/selfJoinParquet and squashes the following commits:
22df77c [Michael Armbrust] [SPARK-6851][SQL] Create new instance for each converted parquet relation
'(' and ')' are special characters used in Parquet schema for type annotation. When we run an aggregation query, we will obtain attribute name such as "MAX(a)".
If we directly store the generated DataFrame as Parquet file, it causes failure when reading and parsing the stored schema string.
Several methods can be adopted to solve this. This pr uses a simplest one to just replace attribute names before generating Parquet schema based on these attributes.
Another possible method might be modifying all aggregation expression names from "func(column)" to "func[column]".
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#5263 from viirya/parquet_aggregation_name and squashes the following commits:
2d70542 [Liang-Chi Hsieh] Address comment.
463dff4 [Liang-Chi Hsieh] Instead of replacing special chars, showing error message to user to suggest using Alias.
1de001d [Liang-Chi Hsieh] Replace special characters '(' and ')' of Parquet schema.
When union non-decimal types with decimals, we use the following rules:
- FIRST `intTypeToFixed`, then fixed union decimals with precision/scale p1/s2 and p2/s2 will be promoted to
DecimalType(max(p1, p2), max(s1, s2))
- FLOAT and DOUBLE cause fixed-length decimals to turn into DOUBLE (this is the same as Hive,
but note that unlimited decimals are considered bigger than doubles in WidenTypes)
Author: guowei2 <guowei2@asiainfo.com>
Closes#4004 from guowei2/SPARK-5203 and squashes the following commits:
ff50f5f [guowei2] fix code style
11df1bf [guowei2] fix decimal union with double, double->Decimal(15,15)
0f345f9 [guowei2] fix structType merge with decimal
101ed4d [guowei2] fix build error after rebase
0b196e4 [guowei2] code style
fe2c2ca [guowei2] handle union decimal precision in 'DecimalPrecision'
421d840 [guowei2] fix union types for decimal precision
ef2c661 [guowei2] fix union with different decimal type
Just fix a typo.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#5352 from viirya/fix_a_typo and squashes the following commits:
303b2d2 [Liang-Chi Hsieh] Fix typo.
This builds on my earlier pull requests and turns on the explicit type checking in scalastyle.
Author: Reynold Xin <rxin@databricks.com>
Closes#5342 from rxin/SPARK-6428 and squashes the following commits:
7b531ab [Reynold Xin] import ordering
2d9a8a5 [Reynold Xin] jl
e668b1c [Reynold Xin] override
9b9e119 [Reynold Xin] Parenthesis.
82e0cf5 [Reynold Xin] [SPARK-6428] Turn on explicit type checking for public methods.
https://issues.apache.org/jira/browse/SPARK-6575
Author: Yin Huai <yhuai@databricks.com>
This patch had conflicts when merged, resolved by
Committer: Cheng Lian <lian@databricks.com>
Closes#5339 from yhuai/parquetRelationCache and squashes the following commits:
b0e1a42 [Yin Huai] Address comments.
83d9846 [Yin Huai] Remove unnecessary change.
c0dc7a4 [Yin Huai] Cache converted parquet relations.
NotImplementedError in scala 2.10 is a fatal exception, which is not very nice to throw when not actually fatal.
Author: Michael Armbrust <michael@databricks.com>
Closes#5315 from marmbrus/throwUnsupported and squashes the following commits:
c29e03b [Michael Armbrust] [SQL] Throw UnsupportedOperationException instead of NotImplementedError
052e05b [Michael Armbrust] [SQL] Throw UnsupportedOperationException instead of NotImplementedError
In order to do inbound checking and type conversion, we should use Literal.create() instead of constructor.
Author: Davies Liu <davies@databricks.com>
Closes#5320 from davies/literal and squashes the following commits:
1667604 [Davies Liu] fix style and add comment
5f8c0fd [Davies Liu] use Literal.create instread of constructor
1. Test JARs are built & published
1. log4j.resources is explicitly excluded. Without this, downstream test run logging depends on the order the JARs are listed/loaded
1. sql/hive pulls in spark-sql &...spark-catalyst for its test runs
1. The copied in test classes were rm'd, and a test edited to remove its now duplicate assert method
1. Spark streaming is now build with the same plugin/phase as the rest, but its shade plugin declaration is kept in (so different from the rest of the test plugins). Due to (#2), this means the test JAR no longer includes its log4j file.
Outstanding issues:
* should the JARs be shaded? `spark-streaming-test.jar` does, but given these are test jars for developers only, especially in the same spark source tree, it's hard to justify.
* `maven-jar-plugin` v 2.6 was explicitly selected; without this the apache-1.4 parent template JAR version (2.4) chosen.
* Are there any other resources to exclude?
Author: Steve Loughran <stevel@hortonworks.com>
Closes#5119 from steveloughran/stevel/patches/SPARK-6433-test-jars and squashes the following commits:
81ceb01 [Steve Loughran] SPARK-6433 add a clearer comment explaining what the plugin is doing & why
a6dca33 [Steve Loughran] SPARK-6433 : pull configuration section form archive plugin
c2b5f89 [Steve Loughran] SPARK-6433 omit "jar" goal from jar plugin
fdac51b [Steve Loughran] SPARK-6433 -002; indentation & delegate plugin version to parent
650f442 [Steve Loughran] SPARK-6433 patch 001: test JARs are built; sql/hive pulls in spark-sql & spark-catalyst for its test runs
Before it was possible for a query to flip back and forth from a resolved state, allowing resolution to propagate up before coercion had stabilized. The issue was that `ResolvedReferences` would run after `FunctionArgumentConversion`, but before `PropagateTypes` had run. This PR ensures we correctly `PropagateTypes` after any coercion has applied.
Author: Michael Armbrust <michael@databricks.com>
Closes#5278 from marmbrus/unionNull and squashes the following commits:
dc3581a [Michael Armbrust] [SPARK-5371][SQL] Propogate types after function conversion / before futher resolution
Consider a metastore Parquet table that
1. doesn't have schema evolution issue
2. has lots of data files and/or partitions
In this case, driver schema merging can be both slow and unnecessary. Would be good to have a configuration to let the use disable schema merging when converting such a metastore Parquet table.
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Author: Cheng Lian <lian@databricks.com>
Closes#5231 from liancheng/spark-6575 and squashes the following commits:
cd96159 [Cheng Lian] Adds configuration to disable schema merging while converting metastore Parquet tables
Also removes temporary workarounds made in #5183 and #5251.
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Author: Cheng Lian <lian@databricks.com>
Closes#5289 from liancheng/spark-6555 and squashes the following commits:
d0095ac [Cheng Lian] Removes unused imports
cfafeeb [Cheng Lian] Removes outdated comment
75a2746 [Cheng Lian] Overrides equals() and hashCode() for MetastoreRelation
JIRA: https://issues.apache.org/jira/browse/SPARK-6618
Author: Yin Huai <yhuai@databricks.com>
Closes#5281 from yhuai/lookupRelationLock and squashes the following commits:
591b4be [Yin Huai] A test?
b3a9625 [Yin Huai] Just protect client.
This PR leverages the output commit coordinator introduced in #4066 to help committing Hive and Parquet tables.
This PR extracts output commit code in `SparkHadoopWriter.commit` to `SparkHadoopMapRedUtil.commitTask`, and reuses it for committing Parquet and Hive tables on executor side.
TODO
- [ ] Add tests
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Author: Cheng Lian <lian@databricks.com>
Closes#5139 from liancheng/spark-6369 and squashes the following commits:
72eb628 [Cheng Lian] Fixes typo in javadoc
9a4b82b [Cheng Lian] Adds javadoc and addresses @aarondav's comments
dfdf3ef [Cheng Lian] Uses commit coordinator to help committing Hive and Parquet tables
Now that we have `DataFrame`s it is possible to have multiple copies in a single query plan. As such, it needs to inherit from `MultiInstanceRelation` or self joins will break. I also add better debugging errors when our self join handling fails in case there are future bugs.
Author: Michael Armbrust <michael@databricks.com>
Closes#5251 from marmbrus/multiMetaStore and squashes the following commits:
4272f6d [Michael Armbrust] [SPARK-6595][SQL] MetastoreRelation should be MuliInstanceRelation
Author: Reynold Xin <rxin@databricks.com>
Closes#5226 from rxin/empty-df and squashes the following commits:
1306d88 [Reynold Xin] Proper fix.
e135bb9 [Reynold Xin] [SPARK-6564][SQL] SQLContext.emptyDataFrame should contain 0 rows, not 1 row.
If the tests in "sql/hive/src/test/scala/org/apache/spark/sql/hive/execution/SQLQuerySuite.scala" are running before CachedTableSuite.scala, the test("Drop cached table") will failed. Because the table test is created in SQLQuerySuite.scala ,and this table not droped. So when running "drop cached table", table test already exists.
There is error info:
01:18:35.738 ERROR hive.ql.exec.DDLTask: org.apache.hadoop.hive.ql.metadata.HiveException: AlreadyExistsException(message:Table test already exists)
at org.apache.hadoop.hive.ql.metadata.Hive.createTable(Hive.java:616)
at org.apache.hadoop.hive.ql.exec.DDLTask.createTable(DDLTask.java:4189)
at org.apache.hadoop.hive.ql.exec.DDLTask.execute(DDLTask.java:281)
at org.apache.hadoop.hive.ql.exec.Task.executeTask(Task.java:153)
at org.apache.hadoop.hive.ql.exec.TaskRunner.runSequential(TaskRunner.java:85)
at org.apache.hadoop.hive.ql.Driver.launchTask(Driver.java:1503)
at org.apache.hadoop.hive.ql.Driver.execute(Driver.java:1270)
at org.apache.hadoop.hive.ql.Driver.runInternal(Driver.java:1088)
at org.apache.hadoop.hive.ql.Driver.run(Driver.java:911)
at org.apache.hadoop.hive.ql.Driver.run(Driver.java:901)test”
And the test about "create table test" in "sql/hive/src/test/scala/org/apache/spark/sql/hive/execution/SQLQuerySuite.scala,is:
test("SPARK-4825 save join to table") {
val testData = sparkContext.parallelize(1 to 10).map(i => TestData(i, i.toString)).toDF()
sql("CREATE TABLE test1 (key INT, value STRING)")
testData.insertInto("test1")
sql("CREATE TABLE test2 (key INT, value STRING)")
testData.insertInto("test2")
testData.insertInto("test2")
sql("CREATE TABLE test AS SELECT COUNT(a.value) FROM test1 a JOIN test2 b ON a.key = b.key")
checkAnswer(
table("test"),
sql("SELECT COUNT(a.value) FROM test1 a JOIN test2 b ON a.key = b.key").collect().toSeq)
}
Author: KaiXinXiaoLei <huleilei1@huawei.com>
Closes#5150 from KaiXinXiaoLei/testFailed and squashes the following commits:
7534b02 [KaiXinXiaoLei] The UT test of spark is failed.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#4930 from adrian-wang/testvs and squashes the following commits:
2ce590f [Daoyuan Wang] add explicit function types
b1d68bf [Daoyuan Wang] only substitute for parseSql
9c4a950 [Daoyuan Wang] add a comment explaining
18fb481 [Daoyuan Wang] enable variable substitute on test framework
Author: DoingDone9 <799203320@qq.com>
Closes#4973 from DoingDone9/sort_token and squashes the following commits:
855fa10 [DoingDone9] Update HiveQl.scala
c7080b3 [DoingDone9] Sort these tokens in alphabetic order to avoid further duplicate in HiveQl
c87e8b6 [DoingDone9] Merge pull request #3 from apache/master
cb1852d [DoingDone9] Merge pull request #2 from apache/master
c3f046f [DoingDone9] Merge pull request #1 from apache/master
In hive,the schema of partition may be difference from the table schema.When we use spark-sql to query the data of partition which schema is difference from the table schema,we will get the exceptions as the description of the [jira](https://issues.apache.org/jira/browse/SPARK-5498) .For example:
* We take a look of the schema for the partition and the table
```sql
DESCRIBE partition_test PARTITION (dt='1');
id int None
name string None
dt string None
# Partition Information
# col_name data_type comment
dt string None
```
```
DESCRIBE partition_test;
OK
id bigint None
name string None
dt string None
# Partition Information
# col_name data_type comment
dt string None
```
* run the sql
```sql
SELECT * FROM partition_test where dt='1';
```
we will get the cast exception `java.lang.ClassCastException: org.apache.spark.sql.catalyst.expressions.MutableLong cannot be cast to org.apache.spark.sql.catalyst.expressions.MutableInt`
Author: jeanlyn <jeanlyn92@gmail.com>
Closes#4289 from jeanlyn/schema and squashes the following commits:
9c8da74 [jeanlyn] fix style
b41d6b9 [jeanlyn] fix compile errors
07d84b6 [jeanlyn] Merge branch 'master' into schema
535b0b6 [jeanlyn] reduce conflicts
d6c93c5 [jeanlyn] fix bug
1e8b30c [jeanlyn] fix code style
0549759 [jeanlyn] fix code style
c879aa1 [jeanlyn] clean the code
2a91a87 [jeanlyn] add more test case and clean the code
12d800d [jeanlyn] fix code style
63d170a [jeanlyn] fix compile problem
7470901 [jeanlyn] reduce conflicts
afc7da5 [jeanlyn] make getConvertedOI compatible between 0.12.0 and 0.13.1
b1527d5 [jeanlyn] fix type mismatch
10744ca [jeanlyn] Insert a space after the start of the comment
3b27af3 [jeanlyn] SPARK-5498:fix bug when query the data when partition schema does not match table schema
The `ParquetConversions` analysis rule generates a hash map, which maps from the original `MetastoreRelation` instances to the newly created `ParquetRelation2` instances. However, `MetastoreRelation.equals` doesn't compare output attributes. Thus, if a single metastore Parquet table appears multiple times in a query, only a single entry ends up in the hash map, and the conversion is not correctly performed.
Proper fix for this issue should be overriding `equals` and `hashCode` for MetastoreRelation. Unfortunately, this breaks more tests than expected. It's possible that these tests are ill-formed from the very beginning. As 1.3.1 release is approaching, we'd like to make the change more surgical to avoid potential regressions. The proposed fix here is to make both the metastore relations and their output attributes as keys in the hash map used in ParquetConversions.
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Author: Cheng Lian <lian@databricks.com>
Closes#5183 from liancheng/spark-6450 and squashes the following commits:
3536780 [Cheng Lian] Fixes metastore Parquet table conversion
spark avoid old inteface of hive, then some udaf can not work like "org.apache.hadoop.hive.ql.udf.generic.GenericUDAFAverage"
Author: DoingDone9 <799203320@qq.com>
Closes#5131 from DoingDone9/udaf and squashes the following commits:
9de08d0 [DoingDone9] Update HiveUdfSuite.scala
49c62dc [DoingDone9] Update hiveUdfs.scala
98b134f [DoingDone9] Merge pull request #5 from apache/master
161cae3 [DoingDone9] Merge pull request #4 from apache/master
c87e8b6 [DoingDone9] Merge pull request #3 from apache/master
cb1852d [DoingDone9] Merge pull request #2 from apache/master
c3f046f [DoingDone9] Merge pull request #1 from apache/master
Previously it was okay to throw away subqueries after analysis, as we would never try to use that tree for resolution again. However, with eager analysis in `DataFrame`s this can cause errors for queries such as:
```scala
val df = Seq(1,2,3).map(i => (i, i.toString)).toDF("int", "str")
df.as('x).join(df.as('y), $"x.str" === $"y.str").groupBy("x.str").count()
```
As a result, in this PR we defer the elimination of subqueries until the optimization phase.
Author: Michael Armbrust <michael@databricks.com>
Closes#5160 from marmbrus/subqueriesInDfs and squashes the following commits:
a9bb262 [Michael Armbrust] Update Optimizer.scala
27d25bf [Michael Armbrust] fix hive tests
9137e03 [Michael Armbrust] add type
81cd597 [Michael Armbrust] Avoid eliminating subqueries until optimization
Author: Michael Armbrust <michael@databricks.com>
Closes#5155 from marmbrus/errorMessages and squashes the following commits:
b898188 [Michael Armbrust] Fix formatting of error messages.
Author: Reynold Xin <rxin@databricks.com>
Closes#5108 from rxin/hive-public-type and squashes the following commits:
a320328 [Reynold Xin] [SPARK-6428][SQL] Added explicit type for all public methods for Hive module.
This PR creates a trait `DataTypeParser` used to parse data types. This trait aims to be single place to provide the functionality of parsing data types' string representation. It is currently mixed in with `DDLParser` and `SqlParser`. It is also used to parse the data type for `DataFrame.cast` and to convert Hive metastore's data type string back to a `DataType`.
JIRA: https://issues.apache.org/jira/browse/SPARK-6250
Author: Yin Huai <yhuai@databricks.com>
Closes#5078 from yhuai/ddlKeywords and squashes the following commits:
0e66097 [Yin Huai] Special handle struct<>.
fea6012 [Yin Huai] Style.
c9733fb [Yin Huai] Create a trait to parse data types.
SELECT sum('a'), avg('a'), variance('a'), std('a') FROM src;
Should give output as
0.0 NULL NULL NULL
This fixes hive udaf_number_format.q
Author: Venkata Ramana G <ramana.gollamudihuawei.com>
Author: Venkata Ramana Gollamudi <ramana.gollamudi@huawei.com>
Closes#4466 from gvramana/sum_fix and squashes the following commits:
42e14d1 [Venkata Ramana Gollamudi] Added comments
39415c0 [Venkata Ramana Gollamudi] Handled the partitioned Sum expression scenario
df66515 [Venkata Ramana Gollamudi] code style fix
4be2606 [Venkata Ramana Gollamudi] Add udaf_number_format to whitelist and golden answer
330fd64 [Venkata Ramana Gollamudi] fix sum function for all null data
Use `Utils.createTempDir()` to replace other temp file mechanisms used in some tests, to further ensure they are cleaned up, and simplify
Author: Sean Owen <sowen@cloudera.com>
Closes#5029 from srowen/SPARK-6338 and squashes the following commits:
27b740a [Sean Owen] Fix hive-thriftserver tests that don't expect an existing dir
4a212fa [Sean Owen] Standardize a bit more temp dir management
9004081 [Sean Owen] Revert some added recursive-delete calls
57609e4 [Sean Owen] Use Utils.createTempDir() to replace other temp file mechanisms used in some tests, to further ensure they are cleaned up, and simplify
We need to handle ambiguous `exprId`s that are produced by new aliases as well as those caused by leaf nodes (`MultiInstanceRelation`).
Attempting to fix this revealed a bug in `equals` for `Alias` as these objects were comparing equal even when the expression ids did not match. Additionally, `LocalRelation` did not correctly provide statistics, and some tests in `catalyst` and `hive` were not using the helper functions for comparing plans.
Based on #4991 by chenghao-intel
Author: Michael Armbrust <michael@databricks.com>
Closes#5062 from marmbrus/selfJoins and squashes the following commits:
8e9b84b [Michael Armbrust] check qualifier too
8038a36 [Michael Armbrust] handle aggs too
0b9c687 [Michael Armbrust] fix more tests
c3c574b [Michael Armbrust] revert change.
725f1ab [Michael Armbrust] add statistics
a925d08 [Michael Armbrust] check for conflicting attributes in join resolution
b022ef7 [Michael Armbrust] Handle project aliases.
d8caa40 [Michael Armbrust] test case: SPARK-6247
f9c67c2 [Michael Armbrust] Check for duplicate attributes in join resolution.
898af73 [Michael Armbrust] Fix Alias equality.
Now spark version is only support
```create table table_in_database_creation.test1 as select * from src limit 1;``` in HiveContext.
This patch is used to support
```create table `table_in_database_creation.test2` as select * from src limit 1;``` in HiveContext.
Author: watermen <qiyadong2010@gmail.com>
Author: q00251598 <qiyadong@huawei.com>
Closes#4427 from watermen/SPARK-5651 and squashes the following commits:
c5c8ed1 [watermen] add the generated golden files
1f0e42e [q00251598] add input64 in blacklist and add test suit
`ResolveUdtfsAlias` in `hiveUdfs` only considers the `HiveGenericUdtf` with multiple alias. When only single alias is used with `HiveGenericUdtf`, the alias is not working.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#4692 from viirya/udft_alias and squashes the following commits:
8a3bae4 [Liang-Chi Hsieh] No need to test selected column from DataFrame since DataFrame API is updated.
160a379 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into udft_alias
e6531cc [Liang-Chi Hsieh] Selected column from DataFrame should not re-analyze logical plan.
a45cc2a [Liang-Chi Hsieh] Resolve UdtfsAlias when only single Alias is used.
---- comment;
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#4500 from adrian-wang/semicolon and squashes the following commits:
70b8abb [Daoyuan Wang] use mkstring instead of reduce
2d49738 [Daoyuan Wang] remove outdated golden file
317346e [Daoyuan Wang] only skip comment with semicolon at end of line, to avoid golden file outdated
d3ae01e [Daoyuan Wang] fix error
a11602d [Daoyuan Wang] fix comment with semicolon at end
Still, we keep only a single HiveContext within ThriftServer, and we also create a object called `SQLSession` for isolating the different user states.
Developers can obtain/release a new user session via `openSession` and `closeSession`, and `SQLContext` and `HiveContext` will also provide a default session if no `openSession` called, for backward-compatibility.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4885 from chenghao-intel/multisessions_singlecontext and squashes the following commits:
1c47b2a [Cheng Hao] rename the tss => tlSession
815b27a [Cheng Hao] code style issue
57e3fa0 [Cheng Hao] openSession is not compatible between Hive0.12 & 0.13.1
4665b0d [Cheng Hao] thriftservice with single context
Resolve javac, scalac warnings of various types -- deprecations, Scala lang, unchecked cast, etc.
Author: Sean Owen <sowen@cloudera.com>
Closes#4950 from srowen/SPARK-6225 and squashes the following commits:
3080972 [Sean Owen] Ordered imports: Java, Scala, 3rd party, Spark
c67985b [Sean Owen] Resolve javac, scalac warnings of various types -- deprecations, Scala lang, unchecked cast, etc.
Option 1 of 2: Convert spark-parent module name to spark-parent_2.10 / spark-parent_2.11
Author: Sean Owen <sowen@cloudera.com>
Closes#4912 from srowen/SPARK-6182.1 and squashes the following commits:
eff60de [Sean Owen] Convert spark-parent module name to spark-parent_2.10 / spark-parent_2.11
- Various Fixes to docs
- Make data source traits actually interfaces
Based on #4862 but with fixed conflicts.
Author: Reynold Xin <rxin@databricks.com>
Author: Michael Armbrust <michael@databricks.com>
Closes#4868 from marmbrus/pr/4862 and squashes the following commits:
fe091ea [Michael Armbrust] Merge remote-tracking branch 'origin/master' into pr/4862
0208497 [Reynold Xin] Test fixes.
34e0a28 [Reynold Xin] [SPARK-5310][SQL] Various fixes to Spark SQL docs.
This PR contains the following changes:
1. Add a new method, `DataType.equalsIgnoreCompatibleNullability`, which is the middle ground between DataType's equality check and `DataType.equalsIgnoreNullability`. For two data types `from` and `to`, it does `equalsIgnoreNullability` as well as if the nullability of `from` is compatible with that of `to`. For example, the nullability of `ArrayType(IntegerType, containsNull = false)` is compatible with that of `ArrayType(IntegerType, containsNull = true)` (for an array without null values, we can always say it may contain null values). However, the nullability of `ArrayType(IntegerType, containsNull = true)` is incompatible with that of `ArrayType(IntegerType, containsNull = false)` (for an array that may have null values, we cannot say it does not have null values).
2. For the `resolved` field of `InsertIntoTable`, use `equalsIgnoreCompatibleNullability` to replace the equality check of the data types.
3. For our data source write path, when appending data, we always use the schema of existing table to write the data. This is important for parquet, since nullability direct impacts the way to encode/decode values. If we do not do this, we may see corrupted values when reading values from a set of parquet files generated with different nullability settings.
4. When generating a new parquet table, we always set nullable/containsNull/valueContainsNull to true. So, we will not face situations that we cannot append data because containsNull/valueContainsNull in an Array/Map column of the existing table has already been set to `false`. This change makes the whole data pipeline more robust.
5. Update the equality check of JSON relation. Since JSON does not really cares nullability, `equalsIgnoreNullability` seems a better choice to compare schemata from to JSON tables.
JIRA: https://issues.apache.org/jira/browse/SPARK-5950
Thanks viirya for the initial work in #4729.
cc marmbrus liancheng
Author: Yin Huai <yhuai@databricks.com>
Closes#4826 from yhuai/insertNullabilityCheck and squashes the following commits:
3b61a04 [Yin Huai] Revert change on equals.
80e487e [Yin Huai] asNullable in UDT.
587d88b [Yin Huai] Make methods private.
0cb7ea2 [Yin Huai] marmbrus's comments.
3cec464 [Yin Huai] Cheng's comments.
486ed08 [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertNullabilityCheck
d3747d1 [Yin Huai] Remove unnecessary change.
8360817 [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertNullabilityCheck
8a3f237 [Yin Huai] Use equalsIgnoreNullability instead of equality check.
0eb5578 [Yin Huai] Fix tests.
f6ed813 [Yin Huai] Update old parquet path.
e4f397c [Yin Huai] Unit tests.
b2c06f8 [Yin Huai] Ignore nullability in JSON relation's equality check.
8bd008b [Yin Huai] nullable, containsNull, and valueContainsNull will be always true for parquet data.
bf50d73 [Yin Huai] When appending data, we use the schema of the existing table instead of the schema of the new data.
0a703e7 [Yin Huai] Test failed again since we cannot read correct content.
9a26611 [Yin Huai] Make InsertIntoTable happy.
8f19fe5 [Yin Huai] equalsIgnoreCompatibleNullability
4ec17fd [Yin Huai] Failed test.
Author: Michael Armbrust <michael@databricks.com>
Closes#4855 from marmbrus/explodeBug and squashes the following commits:
a712249 [Michael Armbrust] [SPARK-6114][SQL] Avoid metastore conversions before plan is resolved
HiveQL expression like `select count(1) from src tablesample(1 percent);` means take 1% sample to select. But it means 100% in the current version of the Spark.
Author: q00251598 <qiyadong@huawei.com>
Closes#4789 from watermen/SPARK-6040 and squashes the following commits:
2453ebe [q00251598] check and adjust the fraction.
When run ```select * from nzhang_part where hr = 'file,';```, it throws exception ```java.lang.IllegalArgumentException: Can not create a Path from an empty string```
. Because the path of hdfs contains comma, and FileInputFormat.setInputPaths will split path by comma.
### SQL
```
set hive.merge.mapfiles=true;
set hive.merge.mapredfiles=true;
set hive.input.format=org.apache.hadoop.hive.ql.io.HiveInputFormat;
set hive.exec.dynamic.partition=true;
set hive.exec.dynamic.partition.mode=nonstrict;
create table nzhang_part like srcpart;
insert overwrite table nzhang_part partition (ds='2010-08-15', hr) select key, value, hr from srcpart where ds='2008-04-08';
insert overwrite table nzhang_part partition (ds='2010-08-15', hr=11) select key, value from srcpart where ds='2008-04-08';
insert overwrite table nzhang_part partition (ds='2010-08-15', hr)
select * from (
select key, value, hr from srcpart where ds='2008-04-08'
union all
select '1' as key, '1' as value, 'file,' as hr from src limit 1) s;
select * from nzhang_part where hr = 'file,';
```
### Error Log
```
15/02/10 14:33:16 ERROR SparkSQLDriver: Failed in [select * from nzhang_part where hr = 'file,']
java.lang.IllegalArgumentException: Can not create a Path from an empty string
at org.apache.hadoop.fs.Path.checkPathArg(Path.java:127)
at org.apache.hadoop.fs.Path.<init>(Path.java:135)
at org.apache.hadoop.util.StringUtils.stringToPath(StringUtils.java:241)
at org.apache.hadoop.mapred.FileInputFormat.setInputPaths(FileInputFormat.java:400)
at org.apache.spark.sql.hive.HadoopTableReader$.initializeLocalJobConfFunc(TableReader.scala:251)
at org.apache.spark.sql.hive.HadoopTableReader$$anonfun$11.apply(TableReader.scala:229)
at org.apache.spark.sql.hive.HadoopTableReader$$anonfun$11.apply(TableReader.scala:229)
at org.apache.spark.rdd.HadoopRDD$$anonfun$getJobConf$6.apply(HadoopRDD.scala:172)
at org.apache.spark.rdd.HadoopRDD$$anonfun$getJobConf$6.apply(HadoopRDD.scala:172)
at scala.Option.map(Option.scala:145)
at org.apache.spark.rdd.HadoopRDD.getJobConf(HadoopRDD.scala:172)
at org.apache.spark.rdd.HadoopRDD.getPartitions(HadoopRDD.scala:196)
Author: q00251598 <qiyadong@huawei.com>
Closes#4532 from watermen/SPARK-5741 and squashes the following commits:
9758ab1 [q00251598] fix bug
1db1a1c [q00251598] use setInputPaths(Job job, Path... inputPaths)
b788a72 [q00251598] change FileInputFormat.setInputPaths to jobConf.set and add test suite
JIRA: https://issues.apache.org/jira/browse/SPARK-6073
liancheng
Author: Yin Huai <yhuai@databricks.com>
Closes#4824 from yhuai/refreshCache and squashes the following commits:
b9542ef [Yin Huai] Refresh metadata cache in the Catalog in CreateMetastoreDataSourceAsSelect.
JIRA: https://issues.apache.org/jira/browse/SPARK-6024
Author: Yin Huai <yhuai@databricks.com>
Closes#4795 from yhuai/wideSchema and squashes the following commits:
4882e6f [Yin Huai] Address comments.
73e71b4 [Yin Huai] Address comments.
143927a [Yin Huai] Simplify code.
cc1d472 [Yin Huai] Make the schema wider.
12bacae [Yin Huai] If the JSON string of a schema is too large, split it before storing it in metastore.
e9b4f70 [Yin Huai] Failed test.
Please see JIRA (https://issues.apache.org/jira/browse/SPARK-6016) for details of the bug.
Author: Yin Huai <yhuai@databricks.com>
Closes#4775 from yhuai/parquetFooterCache and squashes the following commits:
78787b1 [Yin Huai] Remove footerCache in FilteringParquetRowInputFormat.
dff6fba [Yin Huai] Failed unit test.
https://issues.apache.org/jira/browse/SPARK-5286
Author: Yin Huai <yhuai@databricks.com>
Closes#4755 from yhuai/SPARK-5286-throwable and squashes the following commits:
4c0c450 [Yin Huai] Catch Throwable instead of Exception.
Author: Michael Armbrust <michael@databricks.com>
Closes#4746 from marmbrus/hiveLock and squashes the following commits:
8b871cf [Michael Armbrust] [SPARK-5952][SQL] Lock when using hive metastore client
Also added test cases for checking the serializability of HiveContext and SQLContext.
Author: Reynold Xin <rxin@databricks.com>
Closes#4628 from rxin/SPARK-5840 and squashes the following commits:
ecb3bcd [Reynold Xin] test cases and reviews.
55eb822 [Reynold Xin] [SPARK-5840][SQL] HiveContext cannot be serialized due to tuple extraction.
Although we've migrated to the DataFrame API, lots of code still uses `rdd` or `srdd` as local variable names. This PR tries to address these naming inconsistencies and some other minor DataFrame related style issues.
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Author: Cheng Lian <lian@databricks.com>
Closes#4670 from liancheng/df-cleanup and squashes the following commits:
3e14448 [Cheng Lian] Cleans up DataFrame variable names and toDF() calls
JIRA: https://issues.apache.org/jira/browse/SPARK-5723
Author: Yin Huai <yhuai@databricks.com>
This patch had conflicts when merged, resolved by
Committer: Michael Armbrust <michael@databricks.com>
Closes#4639 from yhuai/defaultCTASFileFormat and squashes the following commits:
a568137 [Yin Huai] Merge remote-tracking branch 'upstream/master' into defaultCTASFileFormat
ad2b07d [Yin Huai] Update tests and error messages.
8af5b2a [Yin Huai] Update conf key and unit test.
5a67903 [Yin Huai] Use data source write path for Hive's CTAS statements when no storage format/handler is specified.
https://issues.apache.org/jira/browse/SPARK-5875 has a case to reproduce the bug and explain the root cause.
Author: Yin Huai <yhuai@databricks.com>
Closes#4663 from yhuai/projectResolved and squashes the following commits:
472f7b6 [Yin Huai] If a logical.Project has any AggregateExpression or Generator, it's resolved field should be false.
The problem is that after we create an empty hive metastore parquet table (e.g. `CREATE TABLE test (a int) STORED AS PARQUET`), Hive will create an empty dir for us, which cause our data source `ParquetRelation2` fail to get the schema of the table. See JIRA for the case to reproduce the bug and the exception.
This PR is based on #4562 from chenghao-intel.
JIRA: https://issues.apache.org/jira/browse/SPARK-5852
Author: Yin Huai <yhuai@databricks.com>
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4655 from yhuai/CTASParquet and squashes the following commits:
b8b3450 [Yin Huai] Update tests.
2ac94f7 [Yin Huai] Update tests.
3db3d20 [Yin Huai] Minor update.
d7e2308 [Yin Huai] Revert changes in HiveMetastoreCatalog.scala.
36978d1 [Cheng Hao] Update the code as feedback
a04930b [Cheng Hao] fix bug of scan an empty parquet based table
442ffe0 [Cheng Hao] passdown the schema for Parquet File in HiveContext
In unit test, the table src(key INT, value STRING) is not the same as HIVE src(key STRING, value STRING)
https://github.com/apache/hive/blob/branch-0.13/data/scripts/q_test_init.sql
And in the reflect.q, test failed for expression `reflect("java.lang.Integer", "valueOf", key, 16)`, which expect the argument `key` as STRING not INT.
This PR doesn't aim to change the `src` schema, we can do that after 1.3 released, however, we probably need to re-generate all the golden files.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4584 from chenghao-intel/reflect and squashes the following commits:
e5bdc3a [Cheng Hao] Move the test case reflect into blacklist
184abfd [Cheng Hao] revert the change to table src1
d9bcf92 [Cheng Hao] Update the HiveContext Unittest
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#4649 from viirya/use_checkpath and squashes the following commits:
0f9a1a1 [Liang-Chi Hsieh] Use same function to check path parameter.
Current `ParquetConversions` in `HiveMetastoreCatalog` will transformUp the given plan multiple times if there are many Metastore Parquet tables. Since the transformUp operation is recursive, it should be better to only perform it once.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#4651 from viirya/parquet_atonce and squashes the following commits:
c1ed29d [Liang-Chi Hsieh] Fix bug.
e0f919b [Liang-Chi Hsieh] Only transformUp the given plan once.
Added a bunch of tags.
Also changed parquetFile to take varargs rather than a string followed by varargs.
Author: Reynold Xin <rxin@databricks.com>
Closes#4636 from rxin/df-doc and squashes the following commits:
651f80c [Reynold Xin] Fixed parquetFile in PySpark.
8dc3024 [Reynold Xin] [SQL] Various DataFrame doc changes.
This PR adds a `ShowTablesCommand` to support `SHOW TABLES [IN databaseName]` SQL command. The result of `SHOW TABLE` has two columns, `tableName` and `isTemporary`. For temporary tables, the value of `isTemporary` column will be `false`.
JIRA: https://issues.apache.org/jira/browse/SPARK-4865
Author: Yin Huai <yhuai@databricks.com>
Closes#4618 from yhuai/showTablesCommand and squashes the following commits:
0c09791 [Yin Huai] Use ShowTablesCommand.
85ee76d [Yin Huai] Since SHOW TABLES is not a Hive native command any more and we will not see "OK" (originally generated by Hive's driver), use SHOW DATABASES in the test.
94bacac [Yin Huai] Add SHOW TABLES to the list of noExplainCommands.
d71ed09 [Yin Huai] Fix test.
a4a6ec3 [Yin Huai] Add SHOW TABLE command.
JIRA: https://issues.apache.org/jira/browse/SPARK-5839
Author: Yin Huai <yhuai@databricks.com>
Closes#4626 from yhuai/SPARK-5839 and squashes the following commits:
f779d85 [Yin Huai] Use subqeury to wrap replaced ParquetRelation.
2695f13 [Yin Huai] Merge remote-tracking branch 'upstream/master' into SPARK-5839
f1ba6ca [Yin Huai] Address comment.
2c7fa08 [Yin Huai] Use Subqueries to wrap a data source table.
JIRA: https://issues.apache.org/jira/browse/SPARK-5746
liancheng marmbrus
Author: Yin Huai <yhuai@databricks.com>
Closes#4617 from yhuai/insertOverwrite and squashes the following commits:
8e3019d [Yin Huai] Fix compilation error.
499e8e7 [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertOverwrite
e76e85a [Yin Huai] Address comments.
ac31b3c [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertOverwrite
f30bdad [Yin Huai] Use toDF.
99da57e [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertOverwrite
6b7545c [Yin Huai] Add a pre write check to the data source API.
a88c516 [Yin Huai] DDLParser will take a parsering function to take care CTAS statements.
Lifts `HiveMetastoreCatalog.refreshTable` to `Catalog`. Adds `RefreshTable` command to refresh (possibly cached) metadata in external data sources tables.
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Author: Cheng Lian <lian@databricks.com>
Closes#4624 from liancheng/refresh-table and squashes the following commits:
8d1aa4c [Cheng Lian] Adds REFRESH TABLE command
Author: Michael Armbrust <michael@databricks.com>
Closes#4587 from marmbrus/position and squashes the following commits:
0810052 [Michael Armbrust] fix tests
395c019 [Michael Armbrust] Merge remote-tracking branch 'marmbrus/position' into position
e155dce [Michael Armbrust] more errors
f3efa51 [Michael Armbrust] Update AnalysisException.scala
d45ff60 [Michael Armbrust] [SQL] Initial support for reporting location of error in sql string
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#4609 from adrian-wang/ctas and squashes the following commits:
0a75d5a [Daoyuan Wang] reorder import
93d1863 [Daoyuan Wang] add null format in ctas and set default col comment to null
This PR migrates the Parquet data source to the new data source write support API. Now users can also overwriting and appending to existing tables. Notice that inserting into partitioned tables is not supported yet.
When Parquet data source is enabled, insertion to Hive Metastore Parquet tables is also fullfilled by the Parquet data source. This is done by the newly introduced `HiveMetastoreCatalog.ParquetConversions` rule, which is a "proper" implementation of the original hacky `HiveStrategies.ParquetConversion`. The latter is still preserved, and can be removed together with the old Parquet support in the future.
TODO:
- [x] Update outdated comments in `newParquet.scala`.
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Author: Cheng Lian <lian@databricks.com>
Closes#4563 from liancheng/parquet-refining and squashes the following commits:
fa98d27 [Cheng Lian] Fixes test cases which should disable off Parquet data source
2476e82 [Cheng Lian] Fixes compilation error introduced during rebasing
a83d290 [Cheng Lian] Passes Hive Metastore partitioning information to ParquetRelation2
Author: Yin Huai <yhuai@databricks.com>
Closes#4542 from yhuai/moveSaveMode and squashes the following commits:
65a4425 [Yin Huai] Move SaveMode to sql package.
Author: Michael Armbrust <michael@databricks.com>
Author: wangfei <wangfei1@huawei.com>
Closes#4558 from marmbrus/errorMessages and squashes the following commits:
5e5ab50 [Michael Armbrust] Merge pull request #15 from scwf/errorMessages
fa38881 [wangfei] fix for grouping__id
f279a71 [wangfei] make right references for ScriptTransformation
d29fbde [Michael Armbrust] extra case
1a797b4 [Michael Armbrust] comments
d4e9015 [Michael Armbrust] add comment
af9e668 [Michael Armbrust] no braces
34eb3a4 [Michael Armbrust] more work
6197cd5 [Michael Armbrust] [SQL] Better error messages for analysis failures
This PR fixed the resolving problem described in https://issues.apache.org/jira/browse/SPARK-3688
```
CREATE TABLE t1(x INT);
CREATE TABLE t2(a STRUCT<x: INT>, k INT);
SELECT a.x FROM t1 a JOIN t2 b ON a.x = b.k;
```
Author: tianyi <tianyi.asiainfo@gmail.com>
Closes#4524 from tianyi/SPARK-3688 and squashes the following commits:
237a256 [tianyi] resolve a name with table.column pattern first.
Also I fix a bunch of bad output in test cases.
Author: Michael Armbrust <michael@databricks.com>
Closes#4520 from marmbrus/selfJoin and squashes the following commits:
4f4a85c [Michael Armbrust] comments
49c8e26 [Michael Armbrust] fix tests
6fc38de [Michael Armbrust] fix style
55d64b3 [Michael Armbrust] fix dataframe selfjoins
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4496 from chenghao-intel/df_explain and squashes the following commits:
552aa58 [Cheng Hao] Add explain support for DF
Deprecate inferSchema() and applySchema(), use createDataFrame() instead, which could take an optional `schema` to create an DataFrame from an RDD. The `schema` could be StructType or list of names of columns.
Author: Davies Liu <davies@databricks.com>
Closes#4498 from davies/create and squashes the following commits:
08469c1 [Davies Liu] remove Scala/Java API for now
c80a7a9 [Davies Liu] fix hive test
d1bd8f2 [Davies Liu] cleanup applySchema
9526e97 [Davies Liu] createDataFrame from RDD with columns
Also start from the bottom so we show the first error instead of the top error.
Author: Michael Armbrust <michael@databricks.com>
Closes#4439 from marmbrus/analysisException and squashes the following commits:
45862a0 [Michael Armbrust] fix hive test
a773bba [Michael Armbrust] Merge remote-tracking branch 'origin/master' into analysisException
f88079f [Michael Armbrust] update more cases
fede90a [Michael Armbrust] newline
fbf4bc3 [Michael Armbrust] move to sql
6235db4 [Michael Armbrust] [SQL] Add an exception for analysis errors.
Users will not need to put `Options()` in a CREATE TABLE statement when there is not option provided.
Author: Yin Huai <yhuai@databricks.com>
Closes#4515 from yhuai/makeOptionsOptional and squashes the following commits:
1a898d3 [Yin Huai] Make options optional.
show current roles
Author: OopsOutOfMemory <victorshengli@126.com>
Closes#4471 from OopsOutOfMemory/show_current_role and squashes the following commits:
1c6b210 [OopsOutOfMemory] add show current roles
flowing sql get URISyntaxException:
```
create table sc as select *
from (select '2011-01-11', '2011-01-11+14:18:26' from src tablesample (1 rows)
union all
select '2011-01-11', '2011-01-11+15:18:26' from src tablesample (1 rows)
union all
select '2011-01-11', '2011-01-11+16:18:26' from src tablesample (1 rows) ) s;
create table sc_part (key string) partitioned by (ts string) stored as rcfile;
set hive.exec.dynamic.partition=true;
set hive.exec.dynamic.partition.mode=nonstrict;
insert overwrite table sc_part partition(ts) select * from sc;
```
java.net.URISyntaxException: Relative path in absolute URI: ts=2011-01-11+15:18:26
at org.apache.hadoop.fs.Path.initialize(Path.java:206)
at org.apache.hadoop.fs.Path.<init>(Path.java:172)
at org.apache.hadoop.fs.Path.<init>(Path.java:94)
at org.apache.spark.sql.hive.SparkHiveDynamicPartitionWriterContainer.org$apache$spark$sql$hive$SparkHiveDynamicPartitionWriterContainer$$newWriter$1(hiveWriterContainers.scala:230)
at org.apache.spark.sql.hive.SparkHiveDynamicPartitionWriterContainer$$anonfun$getLocalFileWriter$1.apply(hiveWriterContainers.scala:243)
at org.apache.spark.sql.hive.SparkHiveDynamicPartitionWriterContainer$$anonfun$getLocalFileWriter$1.apply(hiveWriterContainers.scala:243)
at scala.collection.mutable.MapLike$class.getOrElseUpdate(MapLike.scala:189)
at scala.collection.mutable.AbstractMap.getOrElseUpdate(Map.scala:91)
at org.apache.spark.sql.hive.SparkHiveDynamicPartitionWriterContainer.getLocalFileWriter(hiveWriterContainers.scala:243)
at org.apache.spark.sql.hive.execution.InsertIntoHiveTable$$anonfun$org$apache$spark$sql$hive$execution$InsertIntoHiveTable$$writeToFile$1$1.apply(InsertIntoHiveTable.scala:113)
at org.apache.spark.sql.hive.execution.InsertIntoHiveTable$$anonfun$org$apache$spark$sql$hive$execution$InsertIntoHiveTable$$writeToFile$1$1.apply(InsertIntoHiveTable.scala:105)
at scala.collection.Iterator$class.foreach(Iterator.scala:727)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1157)
at org.apache.spark.sql.hive.execution.InsertIntoHiveTable.org$apache$spark$sql$hive$execution$InsertIntoHiveTable$$writeToFile$1(InsertIntoHiveTable.scala:105)
at org.apache.spark.sql.hive.execution.InsertIntoHiveTable$$anonfun$saveAsHiveFile$3.apply(InsertIntoHiveTable.scala:87)
at org.apache.spark.sql.hive.execution.InsertIntoHiveTable$$anonfun$saveAsHiveFile$3.apply(InsertIntoHiveTable.scala:87)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:61)
at org.apache.spark.scheduler.Task.run(Task.scala:64)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:194)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
at java.lang.Thread.run(Thread.java:722)
Caused by: java.net.URISyntaxException: Relative path in absolute URI: ts=2011-01-11+15:18:26
at java.net.URI.checkPath(URI.java:1804)
at java.net.URI.<init>(URI.java:752)
at org.apache.hadoop.fs.Path.initialize(Path.java:203)
Author: wangfei <wangfei1@huawei.com>
Author: Fei Wang <wangfei1@huawei.com>
Closes#4368 from scwf/SPARK-5592 and squashes the following commits:
aa55ef4 [Fei Wang] comments addressed
f8f8bb1 [wangfei] added test case
f24624f [wangfei] Merge branch 'master' of https://github.com/apache/spark into SPARK-5592
9998177 [wangfei] added test case
ea81daf [wangfei] fix URISyntaxException
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#4502 from adrian-wang/utf8 and squashes the following commits:
4d7b0ee [Daoyuan Wang] remove useless import
606f981 [Daoyuan Wang] support TOK_CHARSETLITERAL in HiveQl
make hivecontext support "alter ... unset tblproperties("key")"
like :
alter view viewName unset tblproperties("k")
alter table tableName unset tblproperties("k")
Author: DoingDone9 <799203320@qq.com>
Closes#4424 from DoingDone9/unset and squashes the following commits:
6dd8bee [DoingDone9] support "alter ... unset tblproperties("key")"
I added an unnecessary line of code in 13531dd97c.
My bad. Let's delete it.
Author: Yin Huai <yhuai@databricks.com>
Closes#4482 from yhuai/unnecessaryCode and squashes the following commits:
3645af0 [Yin Huai] Code cleanup.
This PR sets the SessionState in HiveContext's QueryExecution. So, we can make sure that SessionState.get can return the SessionState every time.
Author: Yin Huai <yhuai@databricks.com>
Closes#4445 from yhuai/setSessionState and squashes the following commits:
769c9f1 [Yin Huai] Remove unused import.
439f329 [Yin Huai] Try again.
427a0c9 [Yin Huai] Set SessionState everytime when we create a QueryExecution in HiveContext.
a3b7793 [Yin Huai] Set sessionState when dealing with CreateTableAsSelect.
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Author: Cheng Lian <lian@databricks.com>
Closes#4440 from liancheng/parquet-oops and squashes the following commits:
f21ede4 [Cheng Lian] HiveParquetSuite was disabled by mistake, re-enable them.
When the `GetField` chain(`a.b.c.d.....`) is interrupted by `GetItem` like `a.b[0].c.d....`, then the check of ambiguous reference to fields is broken.
The reason is that: for something like `a.b[0].c.d`, we first parse it to `GetField(GetField(GetItem(Unresolved("a.b"), 0), "c"), "d")`. Then in `LogicalPlan#resolve`, we resolve `"a.b"` and build a `GetField` chain from bottom(the relation). But for the 2 outer `GetFiled`, we have to resolve them in `Analyzer` or do it in `GetField` lazily, check data type of child, search needed field, etc. which is similar to what we have done in `LogicalPlan#resolve`.
So in this PR, the fix is just copy the same logic in `LogicalPlan#resolve` to `Analyzer`, which is simple and quick, but I do suggest introduce `UnresolvedGetFiled` like I explained in https://github.com/apache/spark/pull/2405.
Author: Wenchen Fan <cloud0fan@outlook.com>
Closes#4068 from cloud-fan/simple and squashes the following commits:
a6857b5 [Wenchen Fan] fix import order
8411c40 [Wenchen Fan] use UnresolvedGetField
This PR adds a rule to Analyzer that will add preinsert data type casting and field renaming to the select clause in an `INSERT INTO/OVERWRITE` statement. Also, with the change of this PR, we always invalidate our in memory data cache after inserting into a BaseRelation.
cc marmbrus liancheng
Author: Yin Huai <yhuai@databricks.com>
Closes#4373 from yhuai/insertFollowUp and squashes the following commits:
08237a7 [Yin Huai] Merge remote-tracking branch 'upstream/master' into insertFollowUp
316542e [Yin Huai] Doc update.
c9ccfeb [Yin Huai] Revert a unnecessary change.
84aecc4 [Yin Huai] Address comments.
1951fe1 [Yin Huai] Merge remote-tracking branch 'upstream/master'
c18da34 [Yin Huai] Invalidate cache after insert.
727f21a [Yin Huai] Preinsert casting and renaming.
Make below code works.
```
sql("DESCRIBE test").registerTempTable("describeTest")
sql("SELECT * FROM describeTest").collect()
```
Author: OopsOutOfMemory <victorshengli@126.com>
Author: Sheng, Li <OopsOutOfMemory@users.noreply.github.com>
Closes#4249 from OopsOutOfMemory/desc_query and squashes the following commits:
6fee13d [OopsOutOfMemory] up-to-date
e71430a [Sheng, Li] Update HiveOperatorQueryableSuite.scala
3ba1058 [OopsOutOfMemory] change to default argument
aac7226 [OopsOutOfMemory] Merge branch 'master' into desc_query
68eb6dd [OopsOutOfMemory] Merge branch 'desc_query' of github.com:OopsOutOfMemory/spark into desc_query
354ad71 [OopsOutOfMemory] query describe command
d541a35 [OopsOutOfMemory] refine test suite
e1da481 [OopsOutOfMemory] refine test suite
a780539 [OopsOutOfMemory] Merge branch 'desc_query' of github.com:OopsOutOfMemory/spark into desc_query
0015f82 [OopsOutOfMemory] code style
dd0aaef [OopsOutOfMemory] code style
c7d606d [OopsOutOfMemory] rename test suite
75f2342 [OopsOutOfMemory] refine code and test suite
f942c9b [OopsOutOfMemory] initial
11559ae [OopsOutOfMemory] code style
c5fdecf [OopsOutOfMemory] code style
aeaea5f [OopsOutOfMemory] rename test suite
ac2c3bb [OopsOutOfMemory] refine code and test suite
544573e [OopsOutOfMemory] initial
Author: q00251598 <qiyadong@huawei.com>
Closes#4397 from watermen/SPARK-5619 and squashes the following commits:
f819b6c [q00251598] Support show roles in HiveContext.
In Hive, 'FROM' clause is optional. This pr supports it.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#4426 from viirya/optional_from and squashes the following commits:
fe81f31 [Liang-Chi Hsieh] Support optional 'FROM' clause.
Ideally we should convert Metastore Parquet tables with our own Parquet implementation on both read path and write path. However, the write path is not well covered, and causes this test failure. This PR is a hotfix to bring back Jenkins PR builder. A proper fix will be delivered in a follow-up PR.
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Author: Cheng Lian <lian@databricks.com>
Closes#4413 from liancheng/hotfix-parquet-ctas and squashes the following commits:
5291289 [Cheng Lian] Hot fix for "SQLQuerySuite.CTAS with serde"
This PR adds three major improvements to Parquet data source:
1. Partition discovery
While reading Parquet files resides in Hive style partition directories, `ParquetRelation2` automatically discovers partitioning information and infers partition column types.
This is also a partial work for [SPARK-5182] [1], which aims to provide first class partitioning support for the data source API. Related code in this PR can be easily extracted to the data source API level in future versions.
1. Schema merging
When enabled, Parquet data source collects schema information from all Parquet part-files and tries to merge them. Exceptions are thrown when incompatible schemas are detected. This feature is controlled by data source option `parquet.mergeSchema`, and is enabled by default.
1. Metastore Parquet table conversion moved to analysis phase
This greatly simplifies the conversion logic. `ParquetConversion` strategy can be removed once the old Parquet implementation is removed in the future.
This version of Parquet data source aims to entirely replace the old Parquet implementation. However, the old version hasn't been removed yet. Users can fall back to the old version by turning off SQL configuration `spark.sql.parquet.useDataSourceApi`.
Other JIRA tickets fixed as side effects in this PR:
- [SPARK-5509] [3]: `EqualTo` now uses a proper `Ordering` to compare binary types.
- [SPARK-3575] [4]: Metastore schema is now preserved and passed to `ParquetRelation2` via data source option `parquet.metastoreSchema`.
TODO:
- [ ] More test cases for partition discovery
- [x] Fix write path after data source write support (#4294) is merged
It turned out to be non-trivial to fall back to old Parquet implementation on the write path when Parquet data source is enabled. Since we're planning to include data source write support in 1.3.0, I simply ignored two test cases involving Parquet insertion for now.
- [ ] Fix outdated comments and documentations
PS: This PR looks big, but more than a half of the changed lines in this PR are trivial changes to test cases. To test Parquet with and without the new data source, almost all Parquet test cases are moved into wrapper driver functions. This introduces hundreds of lines of changes.
[1]: https://issues.apache.org/jira/browse/SPARK-5182
[2]: https://issues.apache.org/jira/browse/SPARK-5528
[3]: https://issues.apache.org/jira/browse/SPARK-5509
[4]: https://issues.apache.org/jira/browse/SPARK-3575
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Author: Cheng Lian <lian@databricks.com>
Closes#4308 from liancheng/parquet-partition-discovery and squashes the following commits:
b6946e6 [Cheng Lian] Fixes MiMA issues, addresses comments
8232e17 [Cheng Lian] Write support for Parquet data source
a49bd28 [Cheng Lian] Fixes spelling typo in trait name "CreateableRelationProvider"
808380f [Cheng Lian] Fixes issues introduced while rebasing
50dd8d1 [Cheng Lian] Addresses @rxin's comment, fixes UDT schema merging
adf2aae [Cheng Lian] Fixes compilation error introduced while rebasing
4e0175f [Cheng Lian] Fixes Python Parquet API, we need Py4J array to call varargs method
0d8ec1d [Cheng Lian] Adds more test cases
b35c8c6 [Cheng Lian] Fixes some typos and outdated comments
dd704fd [Cheng Lian] Fixes Python Parquet API
596c312 [Cheng Lian] Uses switch to control whether use Parquet data source or not
7d0f7a2 [Cheng Lian] Fixes Metastore Parquet table conversion
a1896c7 [Cheng Lian] Fixes all existing Parquet test suites except for ParquetMetastoreSuite
5654c9d [Cheng Lian] Draft version of Parquet partition discovery and schema merging
Hi, rxin marmbrus
I considered your suggestion (in #4127) and now re-write it. This is now up-to-date.
Could u please review it ?
Author: OopsOutOfMemory <victorshengli@126.com>
Closes#4227 from OopsOutOfMemory/describe and squashes the following commits:
053826f [OopsOutOfMemory] describe
Now spark version is only support ```SELECT -key FROM DECIMAL_UDF;``` in HiveContext.
This patch is used to support ```SELECT +key FROM DECIMAL_UDF;``` in HiveContext.
Author: q00251598 <qiyadong@huawei.com>
Closes#4378 from watermen/SPARK-5606 and squashes the following commits:
777f132 [q00251598] sql-case22
74dd368 [q00251598] sql-case22
1a67410 [q00251598] sql-case22
c5cd5bc [q00251598] sql-case22
Author: guowei2 <guowei2@asiainfo.com>
Closes#3921 from guowei2/SPARK-5118 and squashes the following commits:
b1ba3be [guowei2] add table file check in test case
9da56f8 [guowei2] test case only run in Shim13
112a0b6 [guowei2] add test case
187c7d8 [guowei2] Fix: create table test stored as parquet as select ..
`client.getDatabaseCurrent` uses SessionState's local variable which can be an issue.
Author: Yin Huai <yhuai@databricks.com>
Closes#4355 from yhuai/defaultTablePath and squashes the following commits:
84a29e5 [Yin Huai] Use HiveContext's sessionState instead of using SessionState's thread local variable.
A follow up for #4163: support `select array(key, *) from src`
Since array(key, *) will not go into this case
```
case Alias(f UnresolvedFunction(_, args), name) if containsStar(args) =>
val expandedArgs = args.flatMap {
case s: Star => s.expand(child.output, resolver)
case o => o :: Nil
}
```
here added a case to cover the corner case of array.
/cc liancheng
Author: wangfei <wangfei1@huawei.com>
Author: scwf <wangfei1@huawei.com>
Closes#4353 from scwf/udf-star1 and squashes the following commits:
4350d17 [wangfei] minor fix
a7cd191 [wangfei] minor fix
0942fb1 [wangfei] follow up: support select array(key, *) from src
6ae00db [wangfei] also fix problem with array
da1da09 [scwf] minor fix
f87b5f9 [scwf] added test case
587bf7e [wangfei] compile fix
eb93c16 [wangfei] fix star resolve issue in udf
Support change database owner, here i do not add the golden files since the golden answer is related to the tmp dir path (see 6331e4ac0f)
Author: wangfei <wangfei1@huawei.com>
Closes#4357 from scwf/db_owner and squashes the following commits:
f761533 [wangfei] remove the alter_db_owner which have added to whitelist
79413c6 [wangfei] Revert "added golden files"
6331e4a [wangfei] added golden files
6f7cacd [wangfei] support change database owner
Now CTAS runs successfully but will throw a NoSuchObjectException.
```
create table sc as select *
from (select '2011-01-11', '2011-01-11+14:18:26' from src tablesample (1 rows)
union all
select '2011-01-11', '2011-01-11+15:18:26' from src tablesample (1 rows)
union all
select '2011-01-11', '2011-01-11+16:18:26' from src tablesample (1 rows) ) s;
```
Get this exception:
ERROR Hive: NoSuchObjectException(message:default.sc table not found)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.get_table(HiveMetaStore.java:1560)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.invoke(RetryingHMSHandler.java:105)
at $Proxy8.get_table(Unknown Source)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.getTable(HiveMetaStoreClient.java:997)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.invoke(RetryingMetaStoreClient.java:89)
at $Proxy9.getTable(Unknown Source)
at org.apache.hadoop.hive.ql.metadata.Hive.getTable(Hive.java:976)
at org.apache.hadoop.hive.ql.metadata.Hive.getTable(Hive.java:950)
at org.apache.spark.sql.hive.HiveMetastoreCatalog.tableExists(HiveMetastoreCatalog.scala:152)
at org.apache.spark.sql.hive.HiveContext$$anon$2.org$apache$spark$sql$catalyst$analysis$OverrideCatalog$$super$tableExists(HiveContext.scala:309)
at org.apache.spark.sql.catalyst.analysis.OverrideCatalog$class.tableExists(Catalog.scala:121)
at org.apache.spark.sql.hive.HiveContext$$anon$2.tableExists(HiveContext.scala:309)
at org.apache.spark.sql.hive.execution.CreateTableAsSelect.run(CreateTableAsSelect.scala:63)
at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult$lzycompute(commands.scala:53)
Author: wangfei <wangfei1@huawei.com>
Closes#4365 from scwf/ctas-exception and squashes the following commits:
c7c67bc [wangfei] no used imports
f54eb2a [wangfei] fix exception for CTAS
The previous #3732 is reverted due to some test failure.
Have fixed that.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#4325 from adrian-wang/datenative and squashes the following commits:
096e20d [Daoyuan Wang] fix for mixed timezone
0ed0fdc [Daoyuan Wang] fix test data
a2fdd4e [Daoyuan Wang] getDate
c37832b [Daoyuan Wang] row to catalyst
f0005b1 [Daoyuan Wang] add date in sql parser and java type conversion
024c9a6 [Daoyuan Wang] clean some import order
d6715fc [Daoyuan Wang] refactoring Date as Primitive Int internally
374abd5 [Daoyuan Wang] spark native date type support
Add support for alias of udtfs, such as
```
select stack(2, key, value, key, value) as (a, b) from src limit 5;
select a, b from (select stack(2, key, value, key, value) as (a, b) from src) t limit 5
```
Author: wangfei <wangfei1@huawei.com>
Author: scwf <wangfei1@huawei.com>
Author: Fei Wang <wangfei1@huawei.com>
Closes#4186 from scwf/multi-alias-names and squashes the following commits:
c35e922 [wangfei] fix conflicts
adc8311 [wangfei] minor format fix
2783aed [wangfei] convert it to a Generate instead of leaving it inside of a Project clause
a87668a [wangfei] minor improvement
b25d9b3 [wangfei] resolve conflicts
d38f041 [wangfei] style fix
8cfcebf [wangfei] minor improvement
12a239e [wangfei] fix test case
050177f [wangfei] added extendedCheckRules
3d69329 [wangfei] added CheckMultiAlias to analyzer
324150d [wangfei] added multi alias node
74f5a81 [Fei Wang] imports order fix
5bc3f59 [scwf] style fix
3daec28 [scwf] support alias for udfs with multi output columns
SQL in HiveContext, should be case insensitive, however, the following query will fail.
```scala
udf.register("random0", () => { Math.random()})
assert(sql("SELECT RANDOM0() FROM src LIMIT 1").head().getDouble(0) >= 0.0)
```
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4326 from chenghao-intel/udf_case_sensitive and squashes the following commits:
485cf66 [Cheng Hao] Support the case insensitive for UDF
This PR aims to support `INSERT INTO/OVERWRITE TABLE tableName` and `CREATE TABLE tableName AS SELECT` for the data source API (partitioned tables are not supported).
In this PR, I am also adding the support of `IF NOT EXISTS` for our ddl parser. The current semantic of `IF NOT EXISTS` is explained as follows.
* For a `CREATE TEMPORARY TABLE` statement, it does not `IF NOT EXISTS` for now.
* For a `CREATE TABLE` statement (we are creating a metastore table), if there is an existing table having the same name ...
* when `IF NOT EXISTS` clause is used, we will do nothing.
* when `IF NOT EXISTS` clause is not used, the user will see an exception saying the table already exists.
TODOs:
- [x] CTAS support
- [x] Programmatic APIs
- [ ] Python API (another PR)
- [x] More unit tests
- [ ] Documents (another PR)
marmbrus liancheng rxin
Author: Yin Huai <yhuai@databricks.com>
Closes#4294 from yhuai/writeSupport and squashes the following commits:
3db1539 [Yin Huai] save does not take overwrite.
1c98881 [Yin Huai] Fix test.
142372a [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupport
34e1bfb [Yin Huai] Address comments.
1682ca6 [Yin Huai] Better support for CTAS statements.
e789d64 [Yin Huai] For the Scala API, let users to use tuples to provide options.
0128065 [Yin Huai] Short hand versions of save and load.
66ebd74 [Yin Huai] Formatting.
9203ec2 [Yin Huai] Merge remote-tracking branch 'upstream/master' into writeSupport
e5d29f2 [Yin Huai] Programmatic APIs.
1a719a5 [Yin Huai] CREATE TEMPORARY TABLE with IF NOT EXISTS is not allowed for now.
909924f [Yin Huai] Add saveAsTable for the data source API to DataFrame.
95a7c71 [Yin Huai] Fix bug when handling IF NOT EXISTS clause in a CREATE TEMPORARY TABLE statement.
d37b19c [Yin Huai] Cheng's comments.
fd6758c [Yin Huai] Use BeforeAndAfterAll.
7880891 [Yin Huai] Support CREATE TABLE AS SELECT STATEMENT and the IF NOT EXISTS clause.
cb85b05 [Yin Huai] Initial write support.
2f91354 [Yin Huai] Make INSERT OVERWRITE/INTO statements consistent between HiveQL and SqlParser.
1. Throw UnsupportedOperationException if a Column is not computable.
2. Perform eager analysis on DataFrame so we can catch errors when they happen (not when an action is run).
Author: Reynold Xin <rxin@databricks.com>
Author: Davies Liu <davies@databricks.com>
Closes#4296 from rxin/col-computability and squashes the following commits:
6527b86 [Reynold Xin] Merge pull request #8 from davies/col-computability
fd92bc7 [Reynold Xin] Merge branch 'master' into col-computability
f79034c [Davies Liu] fix python tests
5afe1ff [Reynold Xin] Fix scala test.
17f6bae [Reynold Xin] Various fixes.
b932e86 [Reynold Xin] Added eager analysis for error reporting.
e6f00b8 [Reynold Xin] [SQL][API] ComputableColumn vs IncomputableColumn
override the MetastoreRelation's sameresult method only compare databasename and table name
because in previous :
cache table t1;
select count(*) from t1;
it will read data from memory but the sql below will not,instead it read from hdfs:
select count(*) from t1 t;
because cache data is keyed by logical plan and compare with sameResult ,so when table with alias the same table 's logicalplan is not the same logical plan with out alias so modify the sameresult method only compare databasename and table name
Author: seayi <405078363@qq.com>
Author: Michael Armbrust <michael@databricks.com>
Closes#3898 from seayi/branch-1.2 and squashes the following commits:
8f0c7d2 [seayi] Update CachedTableSuite.scala
a277120 [seayi] Update HiveMetastoreCatalog.scala
8d910aa [seayi] Update HiveMetastoreCatalog.scala
Store daysSinceEpoch as an Int value(4 bytes) to represent DateType, instead of using java.sql.Date(8 bytes as Long) in catalyst row. This ensures the same comparison behavior of Hive and Catalyst.
Subsumes #3381
I thinks there are already some tests in JavaSQLSuite, and for python it will not affect python's datetime class.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#3732 from adrian-wang/datenative and squashes the following commits:
0ed0fdc [Daoyuan Wang] fix test data
a2fdd4e [Daoyuan Wang] getDate
c37832b [Daoyuan Wang] row to catalyst
f0005b1 [Daoyuan Wang] add date in sql parser and java type conversion
024c9a6 [Daoyuan Wang] clean some import order
d6715fc [Daoyuan Wang] refactoring Date as Primitive Int internally
374abd5 [Daoyuan Wang] spark native date type support
This pr adds the support of schema-less syntax, custom field delimiter and SerDe for HiveQL's transform.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#4014 from viirya/schema_less_trans and squashes the following commits:
ac2d1fe [Liang-Chi Hsieh] Refactor codes for comments.
a137933 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into schema_less_trans
aa10fbd [Liang-Chi Hsieh] Add Hive golden answer files again.
575f695 [Liang-Chi Hsieh] Add Hive golden answer files for new unit tests.
a422562 [Liang-Chi Hsieh] Use createQueryTest for unit tests and remove unnecessary imports.
ccb71e3 [Liang-Chi Hsieh] Refactor codes for comments.
37bd391 [Liang-Chi Hsieh] Merge remote-tracking branch 'upstream/master' into schema_less_trans
6000889 [Liang-Chi Hsieh] Wrap input and output schema into ScriptInputOutputSchema.
21727f7 [Liang-Chi Hsieh] Move schema-less output to proper place. Use multilines instead of a long line SQL.
9a6dc04 [Liang-Chi Hsieh] setRecordReaderID is introduced in 0.13.1, use reflection API to call it.
7a14f31 [Liang-Chi Hsieh] Fix bug.
799b5e1 [Liang-Chi Hsieh] Call getSerializedClass instead of using Text.
be2c3fc [Liang-Chi Hsieh] Fix style.
32d3046 [Liang-Chi Hsieh] Add SerDe support.
ab22f7b [Liang-Chi Hsieh] Fix style.
7a48e42 [Liang-Chi Hsieh] Add support of custom field delimiter.
b1729d9 [Liang-Chi Hsieh] Fix style.
ccee49e [Liang-Chi Hsieh] Add unit test.
f561c37 [Liang-Chi Hsieh] Add support of schema-less script transformation.
I'll add test case in #4040
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#4057 from adrian-wang/coal and squashes the following commits:
4d0111a [Daoyuan Wang] address Yin's comments
c393e18 [Daoyuan Wang] fix rebase conflicts
e47c03a [Daoyuan Wang] add coalesce in parser
c74828d [Daoyuan Wang] cast types for coalesce
This PR makes Star a trait, and provides two implementations: UnresolvedStar (used for *, tblName.*) and ResolvedStar (used for df("*")).
Author: Reynold Xin <rxin@databricks.com>
Closes#4283 from rxin/df-star and squashes the following commits:
c9cba3e [Reynold Xin] Removed mapFunction in UnresolvedStar.
1a3a1d7 [Reynold Xin] [SQL] Support df("*") to select all columns in a data frame.
I believe that SPARK-4296 has been fixed by 3684fd21e1. I am adding tests based #3910 (change the udf to HiveUDF instead).
Author: Yin Huai <yhuai@databricks.com>
Author: Cheng Lian <lian@databricks.com>
Closes#4010 from yhuai/SPARK-4296-yin and squashes the following commits:
6343800 [Yin Huai] Merge remote-tracking branch 'upstream/master' into SPARK-4296-yin
6cfadd2 [Yin Huai] Actually, this issue has been fixed by 3684fd21e1.
d42b707 [Yin Huai] Update comment.
8b3a274 [Yin Huai] Since expressions in grouping expressions can have aliases, which can be used by the outer query block, revert this change.
443538d [Cheng Lian] Trims aliases when resolving and checking aggregate expressions
now spark sql does not support star expression in udf, run the following sql by spark-sql will get error
```
select concat(*) from src
```
Author: wangfei <wangfei1@huawei.com>
Author: scwf <wangfei1@huawei.com>
Closes#4163 from scwf/udf-star and squashes the following commits:
9db7b39 [wangfei] addressed comments
da1da09 [scwf] minor fix
f87b5f9 [scwf] added test case
587bf7e [wangfei] compile fix
eb93c16 [wangfei] fix star resolve issue in udf
I found that running `HiveComparisonTest.createQueryTest` to generate Hive golden answer files on Hive 0.13.1 would throw KryoException. I am not sure if this can be reproduced by others. Since Hive 0.13.0, Kryo plan serialization is introduced to replace javaXML as default plan serialization format. This is a quick fix to set hive configuration to use javaXML serialization.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#4223 from viirya/fix_hivetest and squashes the following commits:
97a8760 [Liang-Chi Hsieh] Use javaXML plan serialization.
Turns out Scala does generate static methods for ones defined in a companion object. Finally no need to separate api.java.dsl and api.scala.dsl.
Author: Reynold Xin <rxin@databricks.com>
Closes#4276 from rxin/dsl and squashes the following commits:
30aa611 [Reynold Xin] Add all files.
1a9d215 [Reynold Xin] [SPARK-5445][SQL] Consolidate Java and Scala DSL static methods.
Also removed the literal implicit transformation since it is pretty scary for API design. Instead, created a new lit method for creating literals. This doesn't break anything from a compatibility perspective because Literal was added two days ago.
Author: Reynold Xin <rxin@databricks.com>
Closes#4241 from rxin/df-docupdate and squashes the following commits:
c0f4810 [Reynold Xin] Fix Python merge conflict.
094c7d7 [Reynold Xin] Minor style fix. Reset Python tests.
3c89f4a [Reynold Xin] Package.
dfe6962 [Reynold Xin] Updated Python aggregate.
5dd4265 [Reynold Xin] Made dsl Java callable.
14b3c27 [Reynold Xin] Fix literal expression for symbols.
68b31cb [Reynold Xin] Literal.
4cfeb78 [Reynold Xin] [SPARK-5097][SQL] Address DataFrame code review feedback.
and
[SPARK-5448][SQL] Make CacheManager a concrete class and field in SQLContext
Author: Reynold Xin <rxin@databricks.com>
Closes#4242 from rxin/sqlCleanup and squashes the following commits:
e351cb2 [Reynold Xin] Fixed toDataFrame.
6545c42 [Reynold Xin] More changes.
728c017 [Reynold Xin] [SPARK-5447][SQL] Replaced reference to SchemaRDD with DataFrame.
https://cwiki.apache.org/confluence/display/Hive/LanguageManual+VariableSubstitution
This is a block issue for the CLI user, it impacts the existed hql scripts from Hive.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#4003 from chenghao-intel/substitution and squashes the following commits:
bb41fd6 [Cheng Hao] revert the removed the implicit conversion
af7c31a [Cheng Hao] add hql variable substitution support
* The `SqlLexical.allCaseVersions` will cause `StackOverflowException` if the key word is too long, the patch will fix that by normalizing all of the keywords in `SqlLexical`.
* And make a unified SparkSQLParser for sharing the common code.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3926 from chenghao-intel/long_keyword and squashes the following commits:
686660f [Cheng Hao] Support Long Keyword and Refactor the SQLParsers
JIRA: https://issues.apache.org/jira/browse/SPARK-5286
Author: Yin Huai <yhuai@databricks.com>
Closes#4076 from yhuai/SPARK-5286 and squashes the following commits:
6b69ed1 [Yin Huai] Catch all exception when we try to uncache a query.
JIRA: https://issues.apache.org/jira/browse/SPARK-5284
Author: Yin Huai <yhuai@databricks.com>
Closes#4077 from yhuai/SPARK-5284 and squashes the following commits:
fceacd6 [Yin Huai] Check if a value is null when the field has a complex type.
Author: Reynold Xin <rxin@databricks.com>
Closes#4092 from rxin/bigdecimal and squashes the following commits:
27b08c9 [Reynold Xin] Fixed test.
10cb496 [Reynold Xin] [SPARK-5279][SQL] Use java.math.BigDecimal as the exposed Decimal type.
As part of SPARK-5193:
1. Removed UDFRegistration as a mixin in SQLContext and made it a field ("udf").
2. For Java UDFs, renamed dataType to returnType.
3. For Scala UDFs, added type tags.
4. Added all Java UDF registration methods to Scala's UDFRegistration.
5. Documentation
Author: Reynold Xin <rxin@databricks.com>
Closes#4056 from rxin/udf-registration and squashes the following commits:
ae9c556 [Reynold Xin] Updated example.
675a3c9 [Reynold Xin] Style fix
47c24ff [Reynold Xin] Python fix.
5f00c45 [Reynold Xin] Restore data type position in java udf and added typetags.
032f006 [Reynold Xin] [SPARK-5193][SQL] Reconcile Java and Scala UDFRegistration.
1. Removed the deprecated LocalHiveContext
2. Made private[sql] fields protected[sql] so they don't show up in javadoc.
3. Added javadoc to refreshTable.
4. Added Experimental tag to analyze command.
Author: Reynold Xin <rxin@databricks.com>
Closes#4054 from rxin/hivecontext-api and squashes the following commits:
25cc00a [Reynold Xin] Add implicit conversion back.
cbca886 [Reynold Xin] [SPARK-5193][SQL] Tighten up HiveContext API
1. Removed 2 implicits (logicalPlanToSparkQuery and baseRelationToSchemaRDD)
2. Moved extraStrategies into ExperimentalMethods.
3. Made private methods protected[sql] so they don't show up in javadocs.
4. Removed createParquetFile.
5. Added Java version of applySchema to SQLContext.
Author: Reynold Xin <rxin@databricks.com>
Closes#4049 from rxin/sqlContext-refactor and squashes the following commits:
a326a1a [Reynold Xin] Remove createParquetFile and add applySchema for Java to SQLContext.
ecd6685 [Reynold Xin] Added baseRelationToSchemaRDD back.
4a38c9b [Reynold Xin] [SPARK-5193][SQL] Tighten up SQLContext API
`TaskContext.attemptId` is misleadingly-named, since it currently returns a taskId, which uniquely identifies a particular task attempt within a particular SparkContext, instead of an attempt number, which conveys how many times a task has been attempted.
This patch deprecates `TaskContext.attemptId` and add `TaskContext.taskId` and `TaskContext.attemptNumber` fields. Prior to this change, it was impossible to determine whether a task was being re-attempted (or was a speculative copy), which made it difficult to write unit tests for tasks that fail on early attempts or speculative tasks that complete faster than original tasks.
Earlier versions of the TaskContext docs suggest that `attemptId` behaves like `attemptNumber`, so there's an argument to be made in favor of changing this method's implementation. Since we've decided against making that change in maintenance branches, I think it's simpler to add better-named methods and retain the old behavior for `attemptId`; if `attemptId` behaved differently in different branches, then this would cause confusing build-breaks when backporting regression tests that rely on the new `attemptId` behavior.
Most of this patch is fairly straightforward, but there is a bit of trickiness related to Mesos tasks: since there's no field in MesosTaskInfo to encode the attemptId, I packed it into the `data` field alongside the task binary.
Author: Josh Rosen <joshrosen@databricks.com>
Closes#3849 from JoshRosen/SPARK-4014 and squashes the following commits:
89d03e0 [Josh Rosen] Merge remote-tracking branch 'origin/master' into SPARK-4014
5cfff05 [Josh Rosen] Introduce wrapper for serializing Mesos task launch data.
38574d4 [Josh Rosen] attemptId -> taskAttemptId in PairRDDFunctions
a180b88 [Josh Rosen] Merge remote-tracking branch 'origin/master' into SPARK-4014
1d43aa6 [Josh Rosen] Merge remote-tracking branch 'origin/master' into SPARK-4014
eee6a45 [Josh Rosen] Merge remote-tracking branch 'origin/master' into SPARK-4014
0b10526 [Josh Rosen] Use putInt instead of putLong (silly mistake)
8c387ce [Josh Rosen] Use local with maxRetries instead of local-cluster.
cbe4d76 [Josh Rosen] Preserve attemptId behavior and deprecate it:
b2dffa3 [Josh Rosen] Address some of Reynold's minor comments
9d8d4d1 [Josh Rosen] Doc typo
1e7a933 [Josh Rosen] [SPARK-4014] Change TaskContext.attemptId to return attempt number instead of task ID.
fd515a5 [Josh Rosen] Add failing test for SPARK-4014
jira: https://issues.apache.org/jira/browse/SPARK-5211
Author: Yin Huai <yhuai@databricks.com>
Closes#4026 from yhuai/SPARK-5211 and squashes the following commits:
15ee32b [Yin Huai] Remove extra line.
c6c1651 [Yin Huai] Get back HiveMetastoreTypes.toDataType.
rxin follow up of #3732
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#4041 from adrian-wang/decimal and squashes the following commits:
aa3d738 [Daoyuan Wang] fix auto refactor
7777a58 [Daoyuan Wang] move sql.types.decimal.Decimal to sql.types.Decimal
Having two versions of the data type APIs (one for Java, one for Scala) requires downstream libraries to also have two versions of the APIs if the library wants to support both Java and Scala. I took a look at the Scala version of the data type APIs - it can actually work out pretty well for Java out of the box.
As part of the PR, I created a sql.types package and moved all type definitions there. I then removed the Java specific data type API along with a lot of the conversion code.
This subsumes https://github.com/apache/spark/pull/3925
Author: Reynold Xin <rxin@databricks.com>
Closes#3958 from rxin/SPARK-5123-datatype-2 and squashes the following commits:
66505cc [Reynold Xin] [SPARK-5123] Expose only one version of the data type APIs (i.e. remove the Java-specific API).
This change should be binary and source backward compatible since we didn't change any user facing APIs.
Author: Reynold Xin <rxin@databricks.com>
Closes#3965 from rxin/SPARK-5168-sqlconf and squashes the following commits:
42eec09 [Reynold Xin] Fix default conf value.
0ef86cc [Reynold Xin] Fix constructor ordering.
4d7f910 [Reynold Xin] Properly override config.
ccc8e6a [Reynold Xin] [SPARK-5168] Make SQLConf a field rather than mixin in SQLContext
With changes in this PR, users can persist metadata of tables created based on the data source API in metastore through DDLs.
Author: Yin Huai <yhuai@databricks.com>
Author: Michael Armbrust <michael@databricks.com>
Closes#3960 from yhuai/persistantTablesWithSchema2 and squashes the following commits:
069c235 [Yin Huai] Make exception messages user friendly.
c07cbc6 [Yin Huai] Get the location of test file in a correct way.
4456e98 [Yin Huai] Test data.
5315dfc [Yin Huai] rxin's comments.
7fc4b56 [Yin Huai] Add DDLStrategy and HiveDDLStrategy to plan DDLs based on the data source API.
aeaf4b3 [Yin Huai] Add comments.
06f9b0c [Yin Huai] Revert unnecessary changes.
feb88aa [Yin Huai] Merge remote-tracking branch 'apache/master' into persistantTablesWithSchema2
172db80 [Yin Huai] Fix unit test.
49bf1ac [Yin Huai] Unit tests.
8f8f1a1 [Yin Huai] [SPARK-4574][SQL] Adding support for defining schema in foreign DDL commands. #3431
f47fda1 [Yin Huai] Unit tests.
2b59723 [Michael Armbrust] Set external when creating tables
c00bb1b [Michael Armbrust] Don't use reflection to read options
1ea6e7b [Michael Armbrust] Don't fail when trying to uncache a table that doesn't exist
6edc710 [Michael Armbrust] Add tests.
d7da491 [Michael Armbrust] First draft of persistent tables.
Followup to #3870. Props to rahulaggarwalguavus for identifying the issue.
Author: Michael Armbrust <michael@databricks.com>
Closes#3990 from marmbrus/SPARK-5049 and squashes the following commits:
dd03e4e [Michael Armbrust] Fill in the partition values of parquet scans instead of using JoinedRow
Author: Michael Armbrust <michael@databricks.com>
Closes#3987 from marmbrus/hiveUdfCaching and squashes the following commits:
8bca2fa [Michael Armbrust] [SPARK-5187][SQL] Fix caching of tables with HiveUDFs in the WHERE clause
https://issues.apache.org/jira/browse/SPARK-4963
SchemaRDD.sample() return wrong results due to GapSamplingIterator operating on mutable row.
HiveTableScan make RDD with SpecificMutableRow and SchemaRDD.sample() will return GapSamplingIterator for iterating.
override def next(): T = {
val r = data.next()
advance
r
}
GapSamplingIterator.next() return the current underlying element and assigned it to r.
However if the underlying iterator is mutable row just like what HiveTableScan returned, underlying iterator and r will point to the same object.
After advance operation, we drop some underlying elments and it also changed r which is not expected. Then we return the wrong value different from initial r.
To fix this issue, the most direct way is to make HiveTableScan return mutable row with copy just like the initial commit that I have made. This solution will make HiveTableScan can not get the full advantage of reusable MutableRow, but it can make sample operation return correct result.
Further more, we need to investigate GapSamplingIterator.next() and make it can implement copy operation inside it. To achieve this, we should define every elements that RDD can store implement the function like cloneable and it will make huge change.
Author: Yanbo Liang <yanbohappy@gmail.com>
Closes#3827 from yanbohappy/spark-4963 and squashes the following commits:
0912ca0 [Yanbo Liang] code format keep
65c4e7c [Yanbo Liang] import file and clear annotation
55c7c56 [Yanbo Liang] better output of test case
cea7e2e [Yanbo Liang] SchemaRDD add copy operation before Sample operator
e840829 [Yanbo Liang] HiveTableScan return mutable row with copy
Follow up for #3712.
This PR finally remove ```CommandStrategy``` and make all commands follow ```RunnableCommand``` so they can go with ```case r: RunnableCommand => ExecutedCommand(r) :: Nil```.
One exception is the ```DescribeCommand``` of hive, which is a special case and need to distinguish hive table and temporary table, so still keep ```HiveCommandStrategy``` here.
Author: scwf <wangfei1@huawei.com>
Closes#3948 from scwf/followup-SPARK-4861 and squashes the following commits:
6b48e64 [scwf] minor style fix
2c62e9d [scwf] fix for hive module
5a7a819 [scwf] Refactory command in spark sql
Adding support for defining schema in foreign DDL commands. Now foreign DDL support commands like:
```
CREATE TEMPORARY TABLE avroTable
USING org.apache.spark.sql.avro
OPTIONS (path "../hive/src/test/resources/data/files/episodes.avro")
```
With this PR user can define schema instead of infer from file, so support ddl command as follows:
```
CREATE TEMPORARY TABLE avroTable(a int, b string)
USING org.apache.spark.sql.avro
OPTIONS (path "../hive/src/test/resources/data/files/episodes.avro")
```
Author: scwf <wangfei1@huawei.com>
Author: Yin Huai <yhuai@databricks.com>
Author: Fei Wang <wangfei1@huawei.com>
Author: wangfei <wangfei1@huawei.com>
Closes#3431 from scwf/ddl and squashes the following commits:
7e79ce5 [Fei Wang] Merge pull request #22 from yhuai/pr3431yin
38f634e [Yin Huai] Remove Option from createRelation.
65e9c73 [Yin Huai] Revert all changes since applying a given schema has not been testd.
a852b10 [scwf] remove cleanIdentifier
f336a16 [Fei Wang] Merge pull request #21 from yhuai/pr3431yin
baf79b5 [Yin Huai] Test special characters quoted by backticks.
50a03b0 [Yin Huai] Use JsonRDD.nullTypeToStringType to convert NullType to StringType.
1eeb769 [Fei Wang] Merge pull request #20 from yhuai/pr3431yin
f5c22b0 [Yin Huai] Refactor code and update test cases.
f1cffe4 [Yin Huai] Revert "minor refactory"
b621c8f [scwf] minor refactory
d02547f [scwf] fix HiveCompatibilitySuite test failure
8dfbf7a [scwf] more tests for complex data type
ddab984 [Fei Wang] Merge pull request #19 from yhuai/pr3431yin
91ad91b [Yin Huai] Parse data types in DDLParser.
cf982d2 [scwf] fixed test failure
445b57b [scwf] address comments
02a662c [scwf] style issue
44eb70c [scwf] fix decimal parser issue
83b6fc3 [scwf] minor fix
9bf12f8 [wangfei] adding test case
7787ec7 [wangfei] added SchemaRelationProvider
0ba70df [wangfei] draft version
The pull only fixes the parsing error and changes API to use tableIdentifier. Joining different catalog datasource related change is not done in this pull.
Author: Alex Liu <alex_liu68@yahoo.com>
Closes#3941 from alexliu68/SPARK-SQL-4943-3 and squashes the following commits:
343ae27 [Alex Liu] [SPARK-4943][SQL] refactoring according to review
29e5e55 [Alex Liu] [SPARK-4943][SQL] fix failed Hive CTAS tests
6ae77ce [Alex Liu] [SPARK-4943][SQL] fix TestHive matching error
3652997 [Alex Liu] [SPARK-4943][SQL] Allow table name having dot to support db/catalog ...
This change does a few things to make the hadoop-provided profile more useful:
- Create new profiles for other libraries / services that might be provided by the infrastructure
- Simplify and fix the poms so that the profiles are only activated while building assemblies.
- Fix tests so that they're able to run when the profiles are activated
- Add a new env variable to be used by distributions that use these profiles to provide the runtime
classpath for Spark jobs and daemons.
Author: Marcelo Vanzin <vanzin@cloudera.com>
Closes#2982 from vanzin/SPARK-4048 and squashes the following commits:
82eb688 [Marcelo Vanzin] Add a comment.
eb228c0 [Marcelo Vanzin] Fix borked merge.
4e38f4e [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
9ef79a3 [Marcelo Vanzin] Alternative way to propagate test classpath to child processes.
371ebee [Marcelo Vanzin] Review feedback.
52f366d [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
83099fc [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
7377e7b [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
322f882 [Marcelo Vanzin] Fix merge fail.
f24e9e7 [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
8b00b6a [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
9640503 [Marcelo Vanzin] Cleanup child process log message.
115fde5 [Marcelo Vanzin] Simplify a comment (and make it consistent with another pom).
e3ab2da [Marcelo Vanzin] Fix hive-thriftserver profile.
7820d58 [Marcelo Vanzin] Fix CliSuite with provided profiles.
1be73d4 [Marcelo Vanzin] Restore flume-provided profile.
d1399ed [Marcelo Vanzin] Restore jetty dependency.
82a54b9 [Marcelo Vanzin] Remove unused profile.
5c54a25 [Marcelo Vanzin] Fix HiveThriftServer2Suite with *-provided profiles.
1fc4d0b [Marcelo Vanzin] Update dependencies for hive-thriftserver.
f7b3bbe [Marcelo Vanzin] Add snappy to hadoop-provided list.
9e4e001 [Marcelo Vanzin] Remove duplicate hive profile.
d928d62 [Marcelo Vanzin] Redirect child stderr to parent's log.
4d67469 [Marcelo Vanzin] Propagate SPARK_DIST_CLASSPATH on Yarn.
417d90e [Marcelo Vanzin] Introduce "SPARK_DIST_CLASSPATH".
2f95f0d [Marcelo Vanzin] Propagate classpath to child processes during testing.
1adf91c [Marcelo Vanzin] Re-enable maven-install-plugin for a few projects.
284dda6 [Marcelo Vanzin] Rework the "hadoop-provided" profile, add new ones.
This PR:
- Reenables `surefire`, and copies config from `scalatest` (which is itself an old fork of `surefire`, so similar)
- Tells `surefire` to test only Java tests
- Enables `surefire` and `scalatest` for all children, and in turn eliminates some duplication.
For me this causes the Scala and Java tests to be run once each, it seems, as desired. It doesn't affect the SBT build but works for Maven. I still need to verify that all of the Scala tests and Java tests are being run.
Author: Sean Owen <sowen@cloudera.com>
Closes#3651 from srowen/SPARK-4159 and squashes the following commits:
2e8a0af [Sean Owen] Remove specialized SPARK_HOME setting for REPL, YARN tests as it appears to be obsolete
12e4558 [Sean Owen] Append to unit-test.log instead of overwriting, so that both surefire and scalatest output is preserved. Also standardize/correct comments a bit.
e6f8601 [Sean Owen] Reenable Java tests by reenabling surefire with config cloned from scalatest; centralize test config in the parent
JIRA issue: [SPARK-4570](https://issues.apache.org/jira/browse/SPARK-4570)
We are planning to create a `BroadcastLeftSemiJoinHash` to implement the broadcast join for `left semijoin`
In left semijoin :
If the size of data from right side is smaller than the user-settable threshold `AUTO_BROADCASTJOIN_THRESHOLD`,
the planner would mark it as the `broadcast` relation and mark the other relation as the stream side. The broadcast table will be broadcasted to all of the executors involved in the join, as a `org.apache.spark.broadcast.Broadcast` object. It will use `joins.BroadcastLeftSemiJoinHash`.,else it will use `joins.LeftSemiJoinHash`.
The benchmark suggests these made the optimized version 4x faster when `left semijoin`
<pre><code>
Original:
left semi join : 9288 ms
Optimized:
left semi join : 1963 ms
</code></pre>
The micro benchmark load `data1/kv3.txt` into a normal Hive table.
Benchmark code:
<pre><code>
def benchmark(f: => Unit) = {
val begin = System.currentTimeMillis()
f
val end = System.currentTimeMillis()
end - begin
}
val sc = new SparkContext(
new SparkConf()
.setMaster("local")
.setAppName(getClass.getSimpleName.stripSuffix("$")))
val hiveContext = new HiveContext(sc)
import hiveContext._
sql("drop table if exists left_table")
sql("drop table if exists right_table")
sql( """create table left_table (key int, value string)
""".stripMargin)
sql( s"""load data local inpath "/data1/kv3.txt" into table left_table""")
sql( """create table right_table (key int, value string)
""".stripMargin)
sql(
"""
|from left_table
|insert overwrite table right_table
|select left_table.key, left_table.value
""".stripMargin)
val leftSimeJoin = sql(
"""select a.key from left_table a
|left semi join right_table b on a.key = b.key""".stripMargin)
val leftSemiJoinDuration = benchmark(leftSimeJoin.count())
println(s"left semi join : $leftSemiJoinDuration ms ")
</code></pre>
Author: wangxiaojing <u9jing@gmail.com>
Closes#3442 from wangxiaojing/SPARK-4570 and squashes the following commits:
a4a43c9 [wangxiaojing] rebase
f103983 [wangxiaojing] change style
fbe4887 [wangxiaojing] change style
ff2e618 [wangxiaojing] add testsuite
1a8da2a [wangxiaojing] add BroadcastLeftSemiJoinHash
It will cause exception while do query like:
SELECT key+key FROM src sort by value;
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3386 from chenghao-intel/sort and squashes the following commits:
38c78cc [Cheng Hao] revert the SortPartition in SparkStrategies
7e9dd15 [Cheng Hao] update the typo
fcd1d64 [Cheng Hao] rebase the latest master and update the SortBy unit test
Since #3429 has been merged, the bug of wrapping to Writable for HiveGenericUDF is resolved, we can safely remove the foldable checking in `HiveGenericUdf.eval`, which discussed in #2802.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3745 from chenghao-intel/generic_udf and squashes the following commits:
622ad03 [Cheng Hao] Remove the unnecessary code change in Generic UDF
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3796 from chenghao-intel/spark_4959 and squashes the following commits:
3ec08f8 [Cheng Hao] Replace the attribute in comparing its exprId other than itself
HiveInspectorSuite test failure：
[info] - wrap / unwrap null, constant null and writables *** FAILED *** (21 milliseconds)
[info] 1 did not equal 0 (HiveInspectorSuite.scala:136)
this is because the origin date(is 3914-10-23) not equals the date returned by ```unwrap```(is 3914-10-22).
Setting TimeZone and Locale fix this.
Another minor change here is rename ```def checkValues(v1: Any, v2: Any): Unit``` to ```def checkValue(v1: Any, v2: Any): Unit ``` to make the code more clear
Author: scwf <wangfei1@huawei.com>
Author: Fei Wang <wangfei1@huawei.com>
Closes#3814 from scwf/fix-inspectorsuite and squashes the following commits:
d8531ef [Fei Wang] Delete test.log
72b19a9 [scwf] fix HiveInspectorSuite test error
This is a follow up of #3396 , just add a test to white list.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#3826 from adrian-wang/viewtest and squashes the following commits:
f105f68 [Daoyuan Wang] enable view test
This is just a quick fix that locks when calling `runHive`. If we can find a way to avoid the error without a global lock that would be better.
Author: Michael Armbrust <michael@databricks.com>
Closes#3834 from marmbrus/hiveConcurrency and squashes the following commits:
bf25300 [Michael Armbrust] prevent multiple concurrent hive native commands
There are a number of warnings generated in a normal, successful build right now. They're mostly Java unchecked cast warnings, which can be suppressed. But there's a grab bag of other Scala language warnings and so on that can all be easily fixed. The forthcoming PR fixes about 90% of the build warnings I see now.
Author: Sean Owen <sowen@cloudera.com>
Closes#3157 from srowen/SPARK-4297 and squashes the following commits:
8c9e469 [Sean Owen] Suppress unchecked cast warnings, and several other build warning fixes
Minor fix for an obvious scala doc error.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#3751 from viirya/fix_scaladoc and squashes the following commits:
03fddaa [Liang-Chi Hsieh] Fix scala doc.
HiveInspectors.scala failed in compiling with Hadoop 1, as the BytesWritable.copyBytes is not available in Hadoop 1.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3742 from chenghao-intel/settable_oi_hotfix and squashes the following commits:
bb04d1f [Cheng Hao] hot fix for ByteWritables.copyBytes
Hive UDAF may create an customized object constructed by SettableStructObjectInspector, this is critical when integrate Hive UDAF with the refactor-ed UDAF interface.
Performance issue in `wrap/unwrap` since more match cases added, will do it in another PR.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3429 from chenghao-intel/settable_oi and squashes the following commits:
9f0aff3 [Cheng Hao] update code style issues as feedbacks
2b0561d [Cheng Hao] Add more scala doc
f5a40e8 [Cheng Hao] add scala doc
2977e9b [Cheng Hao] remove the timezone setting for test suite
3ed284c [Cheng Hao] fix the date type comparison
f1b6749 [Cheng Hao] Update the comment
932940d [Cheng Hao] Add more unit test
72e4332 [Cheng Hao] Add settable StructObjectInspector support
Adding support to the partial aggregation of SumDistinct
Author: ravipesala <ravindra.pesala@huawei.com>
Closes#3348 from ravipesala/SPARK-2554 and squashes the following commits:
fd28e4d [ravipesala] Fixed review comments
e60e67f [ravipesala] Fixed test cases and made it as nullable
32fe234 [ravipesala] Supporting SumDistinct partial aggregation Conflicts: sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/aggregates.scala
The sql "select * from spark_test::for_test where abs(20141202) is not null" has predicates=List(IS NOT NULL HiveSimpleUdf#org.apache.hadoop.hive.ql.udf.UDFAbs(20141202)) and
partitionKeyIds=AttributeSet(). PruningPredicates is List(IS NOT NULL HiveSimpleUdf#org.apache.hadoop.hive.ql.udf.UDFAbs(20141202)). Then the exception "java.lang.IllegalArgumentException: requirement failed: Partition pruning predicates only supported for partitioned tables." is thrown.
The sql "select * from spark_test::for_test_partitioned_table where abs(20141202) is not null and type_id=11 and platform = 3" with partitioned key insert_date has predicates=List(IS NOT NULL HiveSimpleUdf#org.apache.hadoop.hive.ql.udf.UDFAbs(20141202), (type_id#12 = 11), (platform#8 = 3)) and partitionKeyIds=AttributeSet(insert_date#24). PruningPredicates is List(IS NOT NULL HiveSimpleUdf#org.apache.hadoop.hive.ql.udf.UDFAbs(20141202)).
Author: YanTangZhai <hakeemzhai@tencent.com>
Author: yantangzhai <tyz0303@163.com>
Closes#3556 from YanTangZhai/SPARK-4693 and squashes the following commits:
620ebe3 [yantangzhai] [SPARK-4693] [SQL] PruningPredicates may be wrong if predicates contains an empty AttributeSet() references
37cfdf5 [yantangzhai] [SPARK-4693] [SQL] PruningPredicates may be wrong if predicates contains an empty AttributeSet() references
70a3544 [yantangzhai] [SPARK-4693] [SQL] PruningPredicates may be wrong if predicates contains an empty AttributeSet() references
efa9b03 [YanTangZhai] Update HiveQuerySuite.scala
72accf1 [YanTangZhai] Update HiveQuerySuite.scala
e572b9a [YanTangZhai] Update HiveStrategies.scala
6e643f8 [YanTangZhai] Merge pull request #11 from apache/master
e249846 [YanTangZhai] Merge pull request #10 from apache/master
d26d982 [YanTangZhai] Merge pull request #9 from apache/master
76d4027 [YanTangZhai] Merge pull request #8 from apache/master
03b62b0 [YanTangZhai] Merge pull request #7 from apache/master
8a00106 [YanTangZhai] Merge pull request #6 from apache/master
cbcba66 [YanTangZhai] Merge pull request #3 from apache/master
cdef539 [YanTangZhai] Merge pull request #1 from apache/master
Add support for `GROUPING SETS`, `ROLLUP`, `CUBE` and the the virtual column `GROUPING__ID`.
More details on how to use the `GROUPING SETS" can be found at: https://cwiki.apache.org/confluence/display/Hive/Enhanced+Aggregation,+Cube,+Grouping+and+Rolluphttps://issues.apache.org/jira/secure/attachment/12676811/grouping_set.pdf
The generic idea of the implementations are :
1 Replace the `ROLLUP`, `CUBE` with `GROUPING SETS`
2 Explode each of the input row, and then feed them to `Aggregate`
* Each grouping set are represented as the bit mask for the `GroupBy Expression List`, for each bit, `1` means the expression is selected, otherwise `0` (left is the lower bit, and right is the higher bit in the `GroupBy Expression List`)
* Several of projections are constructed according to the grouping sets, and within each projection(Seq[Expression), we replace those expressions with `Literal(null)` if it's not selected in the grouping set (based on the bit mask)
* Output Schema of `Explode` is `child.output :+ grouping__id`
* GroupBy Expressions of `Aggregate` is `GroupBy Expression List :+ grouping__id`
* Keep the `Aggregation expressions` the same for the `Aggregate`
The expressions substitutions happen in Logic Plan analyzing, so we will benefit from the Logical Plan optimization (e.g. expression constant folding, and map side aggregation etc.), Only an `Explosive` operator added for Physical Plan, which will explode the rows according the pre-set projections.
A known issue will be done in the follow up PR:
* Optimization `ColumnPruning` is not supported yet for `Explosive` node.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#1567 from chenghao-intel/grouping_sets and squashes the following commits:
fe65fcc [Cheng Hao] Remove the extra space
3547056 [Cheng Hao] Add more doc and Simplify the Expand
a7c869d [Cheng Hao] update code as feedbacks
d23c672 [Cheng Hao] Add GroupingExpression to replace the Seq[Expression]
414b165 [Cheng Hao] revert the unnecessary changes
ec276c6 [Cheng Hao] Support Rollup/Cube/GroupingSets
In local mode, Hadoop/Hive will ignore the "mapred.map.tasks", hence for small table file, it's always a single input split, however, SparkSQL doesn't honor that in table scanning, and we will get different result when do the Hive Compatibility test. This PR will fix that.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#2589 from chenghao-intel/source_split and squashes the following commits:
dff38e7 [Cheng Hao] Remove the extra blank line
160a2b6 [Cheng Hao] fix the compiling bug
04d67f7 [Cheng Hao] Keep 1 split for small file in table scanning
Based on #2543.
Author: Michael Armbrust <michael@databricks.com>
Closes#3724 from marmbrus/resolveGetField and squashes the following commits:
0a47aae [Michael Armbrust] Fix case insensitive resolution of GetField.
This PR provides a set Parquet testing API (see trait `ParquetTest`) that enables developers to write more concise test cases. A new set of Parquet test suites built upon this API are added and aim to replace the old `ParquetQuerySuite`. To avoid potential merge conflicts, old testing code are not removed yet. The following classes can be safely removed after most Parquet related PRs are handled:
- `ParquetQuerySuite`
- `ParquetTestData`
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Author: Cheng Lian <lian@databricks.com>
Closes#3644 from liancheng/parquet-tests and squashes the following commits:
800e745 [Cheng Lian] Enforces ordering of test output
3bb8731 [Cheng Lian] Refactors HiveParquetSuite
aa2cb2e [Cheng Lian] Decouples ParquetTest and TestSQLContext
7b43a68 [Cheng Lian] Updates ParquetTest Scaladoc
7f07af0 [Cheng Lian] Adds a new set of Parquet test suites
Author: jerryshao <saisai.shao@intel.com>
Closes#3698 from jerryshao/SPARK-4847 and squashes the following commits:
4741130 [jerryshao] Make later added extraStrategies effect when calling strategies
This enables assertions for the Maven and SBT build, but overrides the Hive module to not enable assertions.
Author: Sean Owen <sowen@cloudera.com>
Closes#3692 from srowen/SPARK-4814 and squashes the following commits:
caca704 [Sean Owen] Disable assertions just for Hive
f71e783 [Sean Owen] Enable assertions for SBT and Maven build
Fix bug when query like:
```
test("save join to table") {
val testData = sparkContext.parallelize(1 to 10).map(i => TestData(i, i.toString))
sql("CREATE TABLE test1 (key INT, value STRING)")
testData.insertInto("test1")
sql("CREATE TABLE test2 (key INT, value STRING)")
testData.insertInto("test2")
testData.insertInto("test2")
sql("SELECT COUNT(a.value) FROM test1 a JOIN test2 b ON a.key = b.key").saveAsTable("test")
checkAnswer(
table("test"),
sql("SELECT COUNT(a.value) FROM test1 a JOIN test2 b ON a.key = b.key").collect().toSeq)
}
```
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3673 from chenghao-intel/spark_4825 and squashes the following commits:
e8cbd56 [Cheng Hao] alternate the pattern matching order for logical plan:CTAS
e004895 [Cheng Hao] fix bug
This is fixed by SPARK-4318 #3184
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#3445 from adrian-wang/emptyaggr and squashes the following commits:
982575e [Daoyuan Wang] enable empty aggr test case
a follow up of #3547
/cc marmbrus
Author: scwf <wangfei1@huawei.com>
Closes#3563 from scwf/rnc and squashes the following commits:
9395661 [scwf] remove unnecessary condition
Whitelist more hive unit test:
"create_like_tbl_props"
"udf5"
"udf_java_method"
"decimal_1"
"udf_pmod"
"udf_to_double"
"udf_to_float"
"udf7" (this will fail in Hive 0.12)
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3522 from chenghao-intel/unittest and squashes the following commits:
f54e4c7 [Cheng Hao] work around to clean up the hive.table.parameters.default in reset
16fee22 [Cheng Hao] Whitelist more unittest
Different from Hive 0.12.0, in Hive 0.13.1 UDF/UDAF/UDTF (aka Hive function) objects should only be initialized once on the driver side and then serialized to executors. However, not all function objects are serializable (e.g. GenericUDF doesn't implement Serializable). Hive 0.13.1 solves this issue with Kryo or XML serializer. Several utility ser/de methods are provided in class o.a.h.h.q.e.Utilities for this purpose. In this PR we chose Kryo for efficiency. The Kryo serializer used here is created in Hive. Spark Kryo serializer wasn't used because there's no available SparkConf instance.
Author: Cheng Hao <hao.cheng@intel.com>
Author: Cheng Lian <lian@databricks.com>
Closes#3640 from chenghao-intel/udf_serde and squashes the following commits:
8e13756 [Cheng Hao] Update the comment
74466a3 [Cheng Hao] refactor as feedbacks
396c0e1 [Cheng Hao] avoid Simple UDF to be serialized
e9c3212 [Cheng Hao] update the comment
19cbd46 [Cheng Hao] support udf instance ser/de after initialization
This is the code refactor and follow ups for #2570
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3336 from chenghao-intel/createtbl and squashes the following commits:
3563142 [Cheng Hao] remove the unused variable
e215187 [Cheng Hao] eliminate the compiling warning
4f97f14 [Cheng Hao] fix bug in unittest
5d58812 [Cheng Hao] revert the API changes
b85b620 [Cheng Hao] fix the regression of temp tabl not found in CTAS
This is a very small fix that catches one specific exception and returns an empty table. #3441 will address this in a more principled way.
Author: Michael Armbrust <michael@databricks.com>
Closes#3586 from marmbrus/fixEmptyParquet and squashes the following commits:
2781d9f [Michael Armbrust] Handle empty lists for newParquet
04dd376 [Michael Armbrust] Avoid exception when reading empty parquet data through Hive
Using ```executeCollect``` to collect the result, because executeCollect is a custom implementation of collect in spark sql which better than rdd's collect
Author: wangfei <wangfei1@huawei.com>
Closes#3547 from scwf/executeCollect and squashes the following commits:
a5ab68e [wangfei] Revert "adding debug info"
a60d680 [wangfei] fix test failure
0db7ce8 [wangfei] adding debug info
184c594 [wangfei] using executeCollect instead collect
Support view definition like
CREATE VIEW view3(valoo)
TBLPROPERTIES ("fear" = "factor")
AS SELECT upper(value) FROM src WHERE key=86;
[valoo as the alias of upper(value)]. This is missing part of SPARK-4239, for a fully view support.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#3396 from adrian-wang/viewcolumn and squashes the following commits:
4d001d0 [Daoyuan Wang] support view with column alias
Author: zsxwing <zsxwing@gmail.com>
Closes#3521 from zsxwing/SPARK-4661 and squashes the following commits:
03cbe3f [zsxwing] Minor code and docs cleanup
Goals:
- Support for accessing parquet using SQL but not requiring Hive (thus allowing support of parquet tables with decimal columns)
- Support for folder based partitioning with automatic discovery of available partitions
- Caching of file metadata
See scaladoc of `ParquetRelation2` for more details.
Author: Michael Armbrust <michael@databricks.com>
Closes#3269 from marmbrus/newParquet and squashes the following commits:
1dd75f1 [Michael Armbrust] Pass all paths for FileInputFormat at once.
645768b [Michael Armbrust] Review comments.
abd8e2f [Michael Armbrust] Alternative implementation of parquet based on the datasources API.
938019e [Michael Armbrust] Add an experimental interface to data sources that exposes catalyst expressions.
e9d2641 [Michael Armbrust] logging / formatting improvements.
Query `SELECT named_struct(lower("AA"), "12", lower("Bb"), "13") FROM src LIMIT 1` will throw exception, some of the Hive Generic UDF/UDAF requires the input object inspector is `ConstantObjectInspector`, however, we won't get that before the expression optimization executed. (Constant Folding).
This PR is a work around to fix this. (As ideally, the `output` of LogicalPlan should be identical before and after Optimization).
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3109 from chenghao-intel/optimized and squashes the following commits:
487ff79 [Cheng Hao] rebase to the latest master & update the unittest
Hive supports the `explain` the CTAS, which was supported by Spark SQL previously, however, seems it was reverted after the code refactoring in HiveQL.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3357 from chenghao-intel/explain and squashes the following commits:
7aace63 [Cheng Hao] Support the CTAS in EXPLAIN command
Author: Marcelo Vanzin <vanzin@cloudera.com>
Closes#3277 from vanzin/version-1.3 and squashes the following commits:
7c3c396 [Marcelo Vanzin] Added temp repo to sbt build.
5f404ff [Marcelo Vanzin] Add another exclusion.
19457e7 [Marcelo Vanzin] Update old version to 1.2, add temporary 1.2 repo.
3c8d705 [Marcelo Vanzin] Workaround for MIMA checks.
e940810 [Marcelo Vanzin] Bumping version to 1.3.0-SNAPSHOT.
Author: Michael Armbrust <michael@databricks.com>
Closes#3272 from marmbrus/keyInPartitionedTable and squashes the following commits:
447f08c [Michael Armbrust] Support partitioned parquet tables that have the key in both the directory and the file
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3308 from chenghao-intel/unwrap_constant_oi and squashes the following commits:
156b500 [Cheng Hao] rebase the master
c5b20ab [Cheng Hao] unwrap for the ConstantObjectInspector
The `totalSize` of external table is always zero, which will influence join strategy(always use broadcast join for external table).
Author: w00228970 <wangfei1@huawei.com>
Closes#3304 from scwf/statistics and squashes the following commits:
568f321 [w00228970] fix statistics for external table
This PR is exactly the same as #3178 except it reverts the `FileStatus.isDir` to `FileStatus.isDirectory` change, since it doesn't compile with Hadoop 1.
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Author: Cheng Lian <lian@databricks.com>
Closes#3298 from liancheng/date-for-thriftserver and squashes the following commits:
866037e [Cheng Lian] Revers isDirectory to isDir (it breaks Hadoop 1 profile)
6f71d0b [Cheng Lian] Makes toHiveString static
26fa955 [Cheng Lian] Fixes complex type support in Hive 0.13.1 shim
a92882a [Cheng Lian] Updates HiveShim for 0.13.1
73f442b [Cheng Lian] Adds Date support for HiveThriftServer2 (Hive 0.12.0)
Author: Michael Armbrust <michael@databricks.com>
Closes#3292 from marmbrus/revert4309 and squashes the following commits:
808e96e [Michael Armbrust] Revert "[SPARK-4309][SPARK-4407][SQL] Date type support for Thrift server, and fixes for complex types"
SPARK-4407 was detected while working on SPARK-4309. Merged these two into a single PR since 1.2.0 RC is approaching.
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Author: Cheng Lian <lian@databricks.com>
Closes#3178 from liancheng/date-for-thriftserver and squashes the following commits:
6f71d0b [Cheng Lian] Makes toHiveString static
26fa955 [Cheng Lian] Fixes complex type support in Hive 0.13.1 shim
a92882a [Cheng Lian] Updates HiveShim for 0.13.1
73f442b [Cheng Lian] Adds Date support for HiveThriftServer2 (Hive 0.12.0)
Author: Michael Armbrust <michael@databricks.com>
Closes#3256 from marmbrus/NanDecimal and squashes the following commits:
4c3ba46 [Michael Armbrust] fix style
d360f83 [Michael Armbrust] Handle NaN cast to decimal
It seems like the winds might have moved away from this approach, but wanted to post the PR anyway because I got it working and to show what it would look like.
Author: Sandy Ryza <sandy@cloudera.com>
Closes#3239 from sryza/sandy-spark-4375 and squashes the following commits:
0ffbe95 [Sandy Ryza] Enable -Dscala-2.11 in sbt
cd42d94 [Sandy Ryza] Update doc
f6644c3 [Sandy Ryza] SPARK-4375 take 2
The `containsNull` of the result `ArrayType` of `CreateArray` should be `true` only if the children is empty or there exists nullable child.
Author: Takuya UESHIN <ueshin@happy-camper.st>
Closes#3110 from ueshin/issues/SPARK-4245 and squashes the following commits:
6f64746 [Takuya UESHIN] Move equalsIgnoreNullability method into DataType.
5a90e02 [Takuya UESHIN] Refine InsertIntoHiveType and add some comments.
cbecba8 [Takuya UESHIN] Fix a test title.
884ec37 [Takuya UESHIN] Merge branch 'master' into issues/SPARK-4245
3c5274b [Takuya UESHIN] Add tests to insert data of types ArrayType / MapType / StructType with nullability is false into Hive table.
41a94a9 [Takuya UESHIN] Replace InsertIntoTable with InsertIntoHiveTable if data types ignoring nullability are same.
43e6ef5 [Takuya UESHIN] Fix containsNull for empty array.
778e997 [Takuya UESHIN] Fix containsNull of the result ArrayType of CreateArray expression.
Currently still not support view like
CREATE VIEW view3(valoo)
TBLPROPERTIES ("fear" = "factor")
AS SELECT upper(value) FROM src WHERE key=86;
because the text in metastore for this view is like
select \`_c0\` as \`valoo\` from (select upper(\`src\`.\`value\`) from \`default\`.\`src\` where ...) \`view3\`
while catalyst cannot resolve \`_c0\` for this query.
For view without colname definition in parentheses, it works fine.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#3131 from adrian-wang/view and squashes the following commits:
8a56fd6 [Daoyuan Wang] michael's comments
e46c056 [Daoyuan Wang] add some golden file
079290a [Daoyuan Wang] remove useless import
88afcad [Daoyuan Wang] support view in HiveQl
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3114 from chenghao-intel/constant_null_oi and squashes the following commits:
e603bda [Cheng Hao] fix the bug of null value for primitive types
50a13ba [Cheng Hao] fix the timezone issue
f54f369 [Cheng Hao] fix bug of constant null value for ObjectInspector
marmbrus
Author: Xiangrui Meng <meng@databricks.com>
Closes#3164 from mengxr/hive-udt and squashes the following commits:
57c7519 [Xiangrui Meng] support udt->hive types (hive->udt is not supported)
andrewor14 Another try at SPARK-1209, to address https://github.com/apache/spark/pull/2814#issuecomment-61197619
I successfully tested with `mvn -Dhadoop.version=1.0.4 -DskipTests clean package; mvn -Dhadoop.version=1.0.4 test` I assume that is what failed Jenkins last time. I also tried `-Dhadoop.version1.2.1` and `-Phadoop-2.4 -Pyarn -Phive` for more coverage.
So this is why the class was put in `org.apache.hadoop` to begin with, I assume. One option is to leave this as-is for now and move it only when Hadoop 1.0.x support goes away.
This is the other option, which adds a call to force the constructor to be public at run-time. It's probably less surprising than putting Spark code in `org.apache.hadoop`, but, does involve reflection. A `SecurityManager` might forbid this, but it would forbid a lot of stuff Spark does. This would also only affect Hadoop 1.0.x it seems.
Author: Sean Owen <sowen@cloudera.com>
Closes#3048 from srowen/SPARK-1209 and squashes the following commits:
0d48f4b [Sean Owen] For Hadoop 1.0.x, make certain constructors public, which were public in later versions
466e179 [Sean Owen] Disable MIMA warnings resulting from moving the class -- this was also part of the PairRDDFunctions type hierarchy though?
eb61820 [Sean Owen] Move SparkHadoopMapRedUtil / SparkHadoopMapReduceUtil from org.apache.hadoop to org.apache.spark
When doing an insert into hive table with partitions the folders written to the file system are in a random order instead of the order defined in table creation. Seems that the loadPartition method in Hive.java has a Map<String,String> parameter but expects to be called with a map that has a defined ordering such as LinkedHashMap. Working on a test but having intillij problems
Author: Matthew Taylor <matthew.t@tbfe.net>
Closes#3076 from tbfenet/partition_dir_order_problem and squashes the following commits:
f1b9a52 [Matthew Taylor] Comment format fix
bca709f [Matthew Taylor] review changes
0e50f6b [Matthew Taylor] test fix
99f1a31 [Matthew Taylor] partition ordering fix
369e618 [Matthew Taylor] partition ordering fix
Currently, the data "unwrap" only support couple of primitive types, not all, it will not cause exception, but may get some performance in table scanning for the type like binary, date, timestamp, decimal etc.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3136 from chenghao-intel/table_reader and squashes the following commits:
fffb729 [Cheng Hao] fix bug for retrieving the timestamp object
e9c97a4 [Cheng Hao] Add more unwrapper functions for primitive type in TableReader
- Turns on compression for in-memory cached data by default
- Changes the default parquet compression format back to gzip (we have seen more OOMs with production workloads due to the way Snappy allocates memory)
- Ups the batch size to 10,000 rows
- Increases the broadcast threshold to 10mb.
- Uses our parquet implementation instead of the hive one by default.
- Cache parquet metadata by default.
Author: Michael Armbrust <michael@databricks.com>
Closes#3064 from marmbrus/fasterDefaults and squashes the following commits:
97ee9f8 [Michael Armbrust] parquet codec docs
e641694 [Michael Armbrust] Remote also
a12866a [Michael Armbrust] Cache metadata.
2d73acc [Michael Armbrust] Update docs defaults.
d63d2d5 [Michael Armbrust] document parquet option
da373f9 [Michael Armbrust] More aggressive defaults
CREATE TABLE t1 (a String);
CREATE TABLE t1 AS SELECT key FROM src; – throw exception
CREATE TABLE if not exists t1 AS SELECT key FROM src; – expect do nothing, currently it will overwrite the t1, which is incorrect.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3013 from chenghao-intel/ctas_unittest and squashes the following commits:
194113e [Cheng Hao] fix bug in CTAS when table already existed
This PR adds User-Defined Types (UDTs) to SQL. It is a precursor to using SchemaRDD as a Dataset for the new MLlib API. Currently, the UDT API is private since there is incomplete support (e.g., no Java or Python support yet).
Author: Joseph K. Bradley <joseph@databricks.com>
Author: Michael Armbrust <michael@databricks.com>
Author: Xiangrui Meng <meng@databricks.com>
Closes#3063 from marmbrus/udts and squashes the following commits:
7ccfc0d [Michael Armbrust] remove println
46a3aee [Michael Armbrust] Slightly easier to read test output.
6cc434d [Michael Armbrust] Recursively convert rows.
e369b91 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into udts
15c10a6 [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into sql-udt2
f3c72fe [Joseph K. Bradley] Fixing merge
e13cd8a [Joseph K. Bradley] Removed Vector UDTs
5817b2b [Joseph K. Bradley] style edits
30ce5b2 [Joseph K. Bradley] updates based on code review
d063380 [Joseph K. Bradley] Cleaned up Java UDT Suite, and added warning about element ordering when creating schema from Java Bean
a571bb6 [Joseph K. Bradley] Removed old UDT code (registry and Java UDTs). Cleaned up other code. Extended JavaUserDefinedTypeSuite
6fddc1c [Joseph K. Bradley] Made MyLabeledPoint into a Java Bean
20630bc [Joseph K. Bradley] fixed scalastyle
fa86b20 [Joseph K. Bradley] Removed Java UserDefinedType, and made UDTs private[spark] for now
8de957c [Joseph K. Bradley] Modified UserDefinedType to store Java class of user type so that registerUDT takes only the udt argument.
8b242ea [Joseph K. Bradley] Fixed merge error after last merge. Note: Last merge commit also removed SQL UDT examples from mllib.
7f29656 [Joseph K. Bradley] Moved udt case to top of all matches. Small cleanups
b028675 [Xiangrui Meng] allow any type in UDT
4500d8a [Xiangrui Meng] update example code
87264a5 [Xiangrui Meng] remove debug code
3143ac3 [Xiangrui Meng] remove unnecessary changes
cfbc321 [Xiangrui Meng] support UDT in parquet
db16139 [Joseph K. Bradley] Added more doc for UserDefinedType. Removed unused code in Suite
759af7a [Joseph K. Bradley] Added more doc to UserDefineType
63626a4 [Joseph K. Bradley] Updated ScalaReflectionsSuite per @marmbrus suggestions
51e5282 [Joseph K. Bradley] fixed 1 test
f025035 [Joseph K. Bradley] Cleanups before PR. Added new tests
85872f6 [Michael Armbrust] Allow schema calculation to be lazy, but ensure its available on executors.
dff99d6 [Joseph K. Bradley] Added UDTs for Vectors in MLlib, plus DatasetExample using the UDTs
cd60cb4 [Joseph K. Bradley] Trying to get other SQL tests to run
34a5831 [Joseph K. Bradley] Added MLlib dependency on SQL.
e1f7b9c [Joseph K. Bradley] blah
2f40c02 [Joseph K. Bradley] renamed UDT types
3579035 [Joseph K. Bradley] udt annotation now working
b226b9e [Joseph K. Bradley] Changing UDT to annotation
fea04af [Joseph K. Bradley] more cleanups
964b32e [Joseph K. Bradley] some cleanups
893ee4c [Joseph K. Bradley] udt finallly working
50f9726 [Joseph K. Bradley] udts
04303c9 [Joseph K. Bradley] udts
39f8707 [Joseph K. Bradley] removed old udt suite
273ac96 [Joseph K. Bradley] basic UDT is working, but deserialization has yet to be done
8bebf24 [Joseph K. Bradley] commented out convertRowToScala for debugging
53de70f [Joseph K. Bradley] more udts...
982c035 [Joseph K. Bradley] still working on UDTs
19b2f60 [Joseph K. Bradley] still working on UDTs
0eaeb81 [Joseph K. Bradley] Still working on UDTs
105c5a3 [Joseph K. Bradley] Adding UserDefinedType to SQL, not done yet.
Move wrapperFor in InsertIntoHiveTable to HiveInspectors to reuse them, this method can be reused when writing date with ObjectInspector(such as orc support)
Author: wangfei <wangfei1@huawei.com>
Author: scwf <wangfei1@huawei.com>
Closes#3057 from scwf/reuse-wraperfor and squashes the following commits:
7ccf932 [scwf] fix conflicts
d44f4da [wangfei] fix imports
9bf1b50 [wangfei] revert no related change
9a5276a [wangfei] move wrapfor to hiveinspector to reuse them
This PR overrides the `GetInfo` Hive Thrift API to provide correct version information. Another property `spark.sql.hive.version` is added to reveal the underlying Hive version. These are generally useful for Spark SQL ODBC driver providers. The Spark version information is extracted from the jar manifest. Also took the chance to remove the `SET -v` hack, which was a workaround for Simba ODBC driver connectivity.
TODO
- [x] Find a general way to figure out Hive (or even any dependency) version.
This [blog post](http://blog.soebes.de/blog/2014/01/02/version-information-into-your-appas-with-maven/) suggests several methods to inspect application version. In the case of Spark, this can be tricky because the chosen method:
1. must applies to both Maven build and SBT build
For Maven builds, we can retrieve the version information from the META-INF/maven directory within the assembly jar. But this doesn't work for SBT builds.
2. must not rely on the original jars of dependencies to extract specific dependency version, because Spark uses assembly jar.
This implies we can't read Hive version from Hive jar files since standard Spark distribution doesn't include them.
3. should play well with `SPARK_PREPEND_CLASSES` to ease local testing during development.
`SPARK_PREPEND_CLASSES` prevents classes to be loaded from the assembly jar, thus we can't locate the jar file and read its manifest.
Given these, maybe the only reliable method is to generate a source file containing version information at build time. pwendell Do you have any suggestions from the perspective of the build process?
**Update** Hive version is now retrieved from the newly introduced `HiveShim` object.
Author: Cheng Lian <lian.cs.zju@gmail.com>
Author: Cheng Lian <lian@databricks.com>
Closes#2843 from liancheng/get-info and squashes the following commits:
a873d0f [Cheng Lian] Updates test case
53f43cd [Cheng Lian] Retrieves underlying Hive verson via HiveShim
1d282b8 [Cheng Lian] Removes the Simba ODBC "SET -v" hack
f857fce [Cheng Lian] Overrides Hive GetInfo Thrift API and adds Hive version property
This PR introduces a new set of APIs to Spark SQL to allow other developers to add support for reading data from new sources in `org.apache.spark.sql.sources`.
New sources must implement the interface `BaseRelation`, which is responsible for describing the schema of the data. BaseRelations have three `Scan` subclasses, which are responsible for producing an RDD containing row objects. The [various Scan interfaces](https://github.com/marmbrus/spark/blob/foreign/sql/core/src/main/scala/org/apache/spark/sql/sources/package.scala#L50) allow for optimizations such as column pruning and filter push down, when the underlying data source can handle these operations.
By implementing a class that inherits from RelationProvider these data sources can be accessed using using pure SQL. I've used the functionality to update the JSON support so it can now be used in this way as follows:
```sql
CREATE TEMPORARY TABLE jsonTableSQL
USING org.apache.spark.sql.json
OPTIONS (
path '/home/michael/data.json'
)
```
Further example usage can be found in the test cases: https://github.com/marmbrus/spark/tree/foreign/sql/core/src/test/scala/org/apache/spark/sql/sources
There is also a library that uses this new API to read avro data available here:
https://github.com/marmbrus/sql-avro
Author: Michael Armbrust <michael@databricks.com>
Closes#2475 from marmbrus/foreign and squashes the following commits:
1ed6010 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into foreign
ab2c31f [Michael Armbrust] fix test
1d41bb5 [Michael Armbrust] unify argument names
5b47901 [Michael Armbrust] Remove sealed, more filter types
fab154a [Michael Armbrust] Merge remote-tracking branch 'origin/master' into foreign
e3e690e [Michael Armbrust] Add hook for extraStrategies
a70d602 [Michael Armbrust] Fix style, more tests, FilteredSuite => PrunedFilteredSuite
70da6d9 [Michael Armbrust] Modify API to ease binary compatibility and interop with Java
7d948ae [Michael Armbrust] Fix equality of AttributeReference.
5545491 [Michael Armbrust] Address comments
5031ac3 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into foreign
22963ef [Michael Armbrust] package objects compile wierdly...
b069146 [Michael Armbrust] traits => abstract classes
34f836a [Michael Armbrust] Make @DeveloperApi
0d74bcf [Michael Armbrust] Add documention on object life cycle
3e06776 [Michael Armbrust] remove line wraps
de3b68c [Michael Armbrust] Remove empty file
360cb30 [Michael Armbrust] style and java api
2957875 [Michael Armbrust] add override
0fd3a07 [Michael Armbrust] Draft of data sources API
- Adds optional precision and scale to Spark SQL's decimal type, which behave similarly to those in Hive 13 (https://cwiki.apache.org/confluence/download/attachments/27362075/Hive_Decimal_Precision_Scale_Support.pdf)
- Replaces our internal representation of decimals with a Decimal class that can store small values in a mutable Long, saving memory in this situation and letting some operations happen directly on Longs
This is still marked WIP because there are a few TODOs, but I'll remove that tag when done.
Author: Matei Zaharia <matei@databricks.com>
Closes#2983 from mateiz/decimal-1 and squashes the following commits:
35e6b02 [Matei Zaharia] Fix issues after merge
227f24a [Matei Zaharia] Review comments
31f915e [Matei Zaharia] Implement Davies's suggestions in Python
eb84820 [Matei Zaharia] Support reading/writing decimals as fixed-length binary in Parquet
4dc6bae [Matei Zaharia] Fix decimal support in PySpark
d1d9d68 [Matei Zaharia] Fix compile error and test issues after rebase
b28933d [Matei Zaharia] Support decimal precision/scale in Hive metastore
2118c0d [Matei Zaharia] Some test and bug fixes
81db9cb [Matei Zaharia] Added mutable Decimal that will be more efficient for small precisions
7af0c3b [Matei Zaharia] Add optional precision and scale to DecimalType, but use Unlimited for now
ec0a947 [Matei Zaharia] Make the result of AVG on Decimals be Decimal, not Double
`HiveThriftServer2` creates a global singleton `SessionState` instance and overrides `HiveContext` to inject the `SessionState` object. This messes up `SessionState` initialization and causes problems.
This PR replaces the global `SessionState` with `HiveContext.sessionState` to avoid the initialization conflict. Also `HiveContext` reuses existing started `SessionState` if any (this is required by `SparkSQLCLIDriver`, which uses specialized `CliSessionState`).
Author: Cheng Lian <lian@databricks.com>
Closes#2887 from liancheng/spark-4037 and squashes the following commits:
8446675 [Cheng Lian] Removes redundant Driver initialization
a28fef5 [Cheng Lian] Avoid starting HiveContext.sessionState multiple times
49b1c5b [Cheng Lian] Reuses existing started SessionState if any
3cd6fab [Cheng Lian] Fixes SPARK-4037
if the query contains "not between" does not work like.
SELECT * FROM src where key not between 10 and 20'
Author: ravipesala <ravindra.pesala@huawei.com>
Closes#3017 from ravipesala/SPARK-4154 and squashes the following commits:
65fc89e [ravipesala] Handled admin comments
32e6d42 [ravipesala] 'not between' is not working
In org.apache.hadoop.hive.serde2.io.TimestampWritable.set , if the next entry is null then current time stamp object is being reset.
However because of this hiveinspectors:unwrap cannot use the same timestamp object without creating a copy.
Author: Venkata Ramana G <ramana.gollamudihuawei.com>
Author: Venkata Ramana Gollamudi <ramana.gollamudi@huawei.com>
Closes#3019 from gvramana/spark_4077 and squashes the following commits:
32d818f [Venkata Ramana Gollamudi] fixed check style
fa01e71 [Venkata Ramana Gollamudi] cloned timestamp object as org.apache.hadoop.hive.serde2.io.TimestampWritable.set will reset current time object
In #2241 hive-thriftserver is not enabled. This patch enable hive-thriftserver to support hive-0.13.1 by using a shim layer refer to #2241.
1 A light shim layer(code in sql/hive-thriftserver/hive-version) for each different hive version to handle api compatibility
2 New pom profiles "hive-default" and "hive-versions"(copy from #2241) to activate different hive version
3 SBT cmd for different version as follows:
hive-0.12.0 --- sbt/sbt -Phive,hadoop-2.3 -Phive-0.12.0 assembly
hive-0.13.1 --- sbt/sbt -Phive,hadoop-2.3 -Phive-0.13.1 assembly
4 Since hive-thriftserver depend on hive subproject, this patch should be merged with #2241 to enable hive-0.13.1 for hive-thriftserver
Author: wangfei <wangfei1@huawei.com>
Author: scwf <wangfei1@huawei.com>
Closes#2685 from scwf/shim-thriftserver1 and squashes the following commits:
f26f3be [wangfei] remove clean to save time
f5cac74 [wangfei] remove local hivecontext test
578234d [wangfei] use new shaded hive
18fb1ff [wangfei] exclude kryo in hive pom
fa21d09 [wangfei] clean package assembly/assembly
8a4daf2 [wangfei] minor fix
0d7f6cf [wangfei] address comments
f7c93ae [wangfei] adding build with hive 0.13 before running tests
bcf943f [wangfei] Merge branch 'master' of https://github.com/apache/spark into shim-thriftserver1
c359822 [wangfei] reuse getCommandProcessor in hiveshim
52674a4 [scwf] sql/hive included since examples depend on it
3529e98 [scwf] move hive module to hive profile
f51ff4e [wangfei] update and fix conflicts
f48d3a5 [scwf] Merge branch 'master' of https://github.com/apache/spark into shim-thriftserver1
41f727b [scwf] revert pom changes
13afde0 [scwf] fix small bug
4b681f4 [scwf] enable thriftserver in profile hive-0.13.1
0bc53aa [scwf] fixed when result filed is null
dfd1c63 [scwf] update run-tests to run hive-0.12.0 default now
c6da3ce [scwf] Merge branch 'master' of https://github.com/apache/spark into shim-thriftserver
7c66b8e [scwf] update pom according spark-2706
ae47489 [scwf] update and fix conflicts
The class DeferredObjectAdapter is the inner class of HiveGenericUdf, which may cause some overhead in closure ser/de-ser. Move it to top level.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#3007 from chenghao-intel/move_deferred and squashes the following commits:
3a139b1 [Cheng Hao] Move inner class DeferredObjectAdapter to top level
(This is just a look at what completely moving the classes would look like. I know Patrick flagged that as maybe not OK, although, it's private?)
Author: Sean Owen <sowen@cloudera.com>
Closes#2814 from srowen/SPARK-1209 and squashes the following commits:
ead1115 [Sean Owen] Disable MIMA warnings resulting from moving the class -- this was also part of the PairRDDFunctions type hierarchy though?
2d42c1d [Sean Owen] Move SparkHadoopMapRedUtil / SparkHadoopMapReduceUtil from org.apache.hadoop to org.apache.spark
In HQL, we convert all of the data type into normal `ObjectInspector`s for UDFs, most of cases it works, however, some of the UDF actually requires its children `ObjectInspector` to be the `ConstantObjectInspector`, which will cause exception.
e.g.
select named_struct("x", "str") from src limit 1;
I updated the method `wrap` by adding the one more parameter `ObjectInspector`(to describe what it expects to wrap to, for example: java.lang.Integer or IntWritable).
As well as the `unwrap` method by providing the input `ObjectInspector`.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#2762 from chenghao-intel/udf_coi and squashes the following commits:
bcacfd7 [Cheng Hao] Shim for both Hive 0.12 & 0.13.1
2416e5d [Cheng Hao] revert to hive 0.12
5793c01 [Cheng Hao] add space before while
4e56e1b [Cheng Hao] style issue
683d3fd [Cheng Hao] Add golden files
fe591e4 [Cheng Hao] update HiveGenericUdf for set the ObjectInspector while constructing the DeferredObject
f6740fe [Cheng Hao] Support Constant ObjectInspector for Map & List
8814c3a [Cheng Hao] Passing ContantObjectInspector(when necessary) for UDF initializing
Currently, `CTAS` (Create Table As Select) doesn't support specifying the `SerDe` in HQL. This PR will pass down the `ASTNode` into the physical operator `execution.CreateTableAsSelect`, which will extract the `CreateTableDesc` object via Hive `SemanticAnalyzer`. In the meantime, I also update the `HiveMetastoreCatalog.createTable` to optionally support the `CreateTableDesc` for table creation.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#2570 from chenghao-intel/ctas_serde and squashes the following commits:
e011ef5 [Cheng Hao] shim for both 0.12 & 0.13.1
cfb3662 [Cheng Hao] revert to hive 0.12
c8a547d [Cheng Hao] Support SerDe properties within CTAS
Currently there is no support of Bitwise & , | in Spark HiveQl and Spark SQL as well. So this PR support the same.
I am closing https://github.com/apache/spark/pull/2926 as it has conflicts to merge. And also added support for Bitwise AND(&), OR(|) ,XOR(^), NOT(~) And I handled all review comments in that PR
Author: ravipesala <ravindra.pesala@huawei.com>
Closes#2961 from ravipesala/SPARK-3814-NEW4 and squashes the following commits:
a391c7a [ravipesala] Rebase with master
JIRA issue: [SPARK-3907]https://issues.apache.org/jira/browse/SPARK-3907
Add turncate table support
TRUNCATE TABLE table_name [PARTITION partition_spec];
partition_spec:
: (partition_col = partition_col_value, partition_col = partiton_col_value, ...)
Removes all rows from a table or partition(s). Currently target table should be native/managed table or exception will be thrown. User can specify partial partition_spec for truncating multiple partitions at once and omitting partition_spec will truncate all partitions in the table.
Author: wangxiaojing <u9jing@gmail.com>
Closes#2770 from wangxiaojing/spark-3907 and squashes the following commits:
63dbd81 [wangxiaojing] change hive scalastyle
7a03707 [wangxiaojing] add comment
f6e710e [wangxiaojing] change truncate table
a1f692c [wangxiaojing] Correct spelling mistakes
3b20007 [wangxiaojing] add truncate can not support column err message
e483547 [wangxiaojing] add golden file
77b1f20 [wangxiaojing] add truncate table support
In ```MetastoreRelation``` the attributes name is lowercase because of hive using lowercase for fields name, so we should convert attributes name in table scan lowercase in ```indexWhere(_.name == a.name)```.
```neededColumnIDs``` may be not correct if not convert to lowercase.
Author: wangfei <wangfei1@huawei.com>
Author: scwf <wangfei1@huawei.com>
Closes#2884 from scwf/fixColumnIds and squashes the following commits:
6174046 [scwf] use AttributeMap for this issue
dc74a24 [wangfei] use lowerName and add a test case for this issue
3ff3a80 [wangfei] more safer change
294fcb7 [scwf] attributes names in table scan should convert lowercase in neededColumnsIDs
...ob conf in SparkHadoopWriter class
Author: Alex Liu <alex_liu68@yahoo.com>
Closes#2677 from alexliu68/SPARK-SQL-3816 and squashes the following commits:
79c269b [Alex Liu] [SPARK-3816][SQL] Add table properties from storage handler to job conf
Append columns ids and names before broadcast ```hiveExtraConf``` in ```HadoopTableReader```.
Author: scwf <wangfei1@huawei.com>
Closes#2885 from scwf/HadoopTableReader and squashes the following commits:
a8c498c [scwf] append columns ids and names before broadcast
Please check https://issues.apache.org/jira/browse/SPARK-4052 for cases triggering this bug.
Author: Yin Huai <huai@cse.ohio-state.edu>
Closes#2899 from yhuai/SPARK-4052 and squashes the following commits:
1188f70 [Yin Huai] Address liancheng's comments.
b6712be [Yin Huai] Use scala.collection.Map instead of Predef.Map (scala.collection.immutable.Map).
As part of the upgrade I also copy the newest version of the query tests, and whitelist a bunch of new ones that are now passing.
Author: Michael Armbrust <michael@databricks.com>
Closes#2936 from marmbrus/fix13tests and squashes the following commits:
d9cbdab [Michael Armbrust] Remove user specific tests
65801cd [Michael Armbrust] style and rat
8f6b09a [Michael Armbrust] Update test harness to work with both Hive 12 and 13.
f044843 [Michael Armbrust] Update Hive query tests and golden files to 0.13
Author: Michael Armbrust <michael@databricks.com>
Closes#2934 from marmbrus/patch-2 and squashes the following commits:
a96dab2 [Michael Armbrust] Remove sleep on reset() failure.
Given that a lot of users are trying to use hive 0.13 in spark, and the incompatibility between hive-0.12 and hive-0.13 on the API level I want to propose following approach, which has no or minimum impact on existing hive-0.12 support, but be able to jumpstart the development of hive-0.13 and future version support.
Approach: Introduce “hive-version” property, and manipulate pom.xml files to support different hive version at compiling time through shim layer, e.g., hive-0.12.0 and hive-0.13.1. More specifically,
1. For each different hive version, there is a very light layer of shim code to handle API differences, sitting in sql/hive/hive-version, e.g., sql/hive/v0.12.0 or sql/hive/v0.13.1
2. Add a new profile hive-default active by default, which picks up all existing configuration and hive-0.12.0 shim (v0.12.0) if no hive.version is specified.
3. If user specifies different version (currently only 0.13.1 by -Dhive.version = 0.13.1), hive-versions profile will be activated, which pick up hive-version specific shim layer and configuration, mainly the hive jars and hive-version shim, e.g., v0.13.1.
4. With this approach, nothing is changed with current hive-0.12 support.
No change by default: sbt/sbt -Phive
For example: sbt/sbt -Phive -Pyarn -Phadoop-2.4 -Dhadoop.version=2.4.0 assembly
To enable hive-0.13: sbt/sbt -Dhive.version=0.13.1
For example: sbt/sbt -Dhive.version=0.13.1 -Pyarn -Phadoop-2.4 -Dhadoop.version=2.4.0 assembly
Note that in hive-0.13, hive-thriftserver is not enabled, which should be fixed by other Jira, and we don’t need -Phive with -Dhive.version in building (probably we should use -Phive -Dhive.version=xxx instead after thrift server is also supported in hive-0.13.1).
Author: Zhan Zhang <zhazhan@gmail.com>
Author: zhzhan <zhazhan@gmail.com>
Author: Patrick Wendell <pwendell@gmail.com>
Closes#2241 from zhzhan/spark-2706 and squashes the following commits:
3ece905 [Zhan Zhang] minor fix
410b668 [Zhan Zhang] solve review comments
cbb4691 [Zhan Zhang] change run-test for new options
0d4d2ed [Zhan Zhang] rebase
497b0f4 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
8fad1cf [Zhan Zhang] change the pom file and make hive-0.13.1 as the default
ab028d1 [Zhan Zhang] rebase
4a2e36d [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
4cb1b93 [zhzhan] Merge pull request #1 from pwendell/pr-2241
b0478c0 [Patrick Wendell] Changes to simplify the build of SPARK-2706
2b50502 [Zhan Zhang] rebase
a72c0d4 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
cb22863 [Zhan Zhang] correct the typo
20f6cf7 [Zhan Zhang] solve compatability issue
f7912a9 [Zhan Zhang] rebase and solve review feedback
301eb4a [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
10c3565 [Zhan Zhang] address review comments
6bc9204 [Zhan Zhang] rebase and remove temparory repo
d3aa3f2 [Zhan Zhang] Merge branch 'master' into spark-2706
cedcc6f [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
3ced0d7 [Zhan Zhang] rebase
d9b981d [Zhan Zhang] rebase and fix error due to rollback
adf4924 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
3dd50e8 [Zhan Zhang] solve conflicts and remove unnecessary implicts
d10bf00 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
dc7bdb3 [Zhan Zhang] solve conflicts
7e0cc36 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
d7c3e1e [Zhan Zhang] Merge branch 'master' into spark-2706
68deb11 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
d48bd18 [Zhan Zhang] address review comments
3ee3b2b [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
57ea52e [Zhan Zhang] Merge branch 'master' into spark-2706
2b0d513 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
9412d24 [Zhan Zhang] address review comments
f4af934 [Zhan Zhang] rebase
1ccd7cc [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
128b60b [Zhan Zhang] ignore 0.12.0 test cases for the time being
af9feb9 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
5f5619f [Zhan Zhang] restructure the directory and different hive version support
05d3683 [Zhan Zhang] solve conflicts
e4c1982 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
94b4fdc [Zhan Zhang] Spark-2706: hive-0.13.1 support on spark
87ebf3b [Zhan Zhang] Merge branch 'master' into spark-2706
921e914 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
f896b2a [Zhan Zhang] Merge branch 'master' into spark-2706
789ea21 [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
cb53a2c [Zhan Zhang] Merge branch 'master' of https://github.com/apache/spark
f6a8a40 [Zhan Zhang] revert
ba14f28 [Zhan Zhang] test
dbedff3 [Zhan Zhang] Merge remote-tracking branch 'upstream/master'
70964fe [Zhan Zhang] revert
fe0f379 [Zhan Zhang] Merge branch 'master' of https://github.com/zhzhan/spark
70ffd93 [Zhan Zhang] revert
42585ec [Zhan Zhang] test
7d5fce2 [Zhan Zhang] test
redundant methods for broadcast in ```TableReader```
Author: wangfei <wangfei1@huawei.com>
Closes#2862 from scwf/TableReader and squashes the following commits:
414cc24 [wangfei] unnecessary methods for broadcast
SparkSql crashes on selecting tables using custom serde.
Example:
----------------
CREATE EXTERNAL TABLE table_name PARTITIONED BY ( a int) ROW FORMAT 'SERDE "org.apache.hadoop.hive.serde2.thrift.ThriftDeserializer" with serdeproperties("serialization.format"="org.apache.thrift.protocol.TBinaryProtocol","serialization.class"="ser_class") STORED AS SEQUENCEFILE;
The following exception is seen on running a query like 'select * from table_name limit 1':
ERROR CliDriver: org.apache.hadoop.hive.serde2.SerDeException: java.lang.NullPointerException
at org.apache.hadoop.hive.serde2.thrift.ThriftDeserializer.initialize(ThriftDeserializer.java:68)
at org.apache.hadoop.hive.ql.plan.TableDesc.getDeserializer(TableDesc.java:80)
at org.apache.spark.sql.hive.execution.HiveTableScan.addColumnMetadataToConf(HiveTableScan.scala:86)
at org.apache.spark.sql.hive.execution.HiveTableScan.<init>(HiveTableScan.scala:100)
at org.apache.spark.sql.hive.HiveStrategies$HiveTableScans$$anonfun$14.apply(HiveStrategies.scala:188)
at org.apache.spark.sql.hive.HiveStrategies$HiveTableScans$$anonfun$14.apply(HiveStrategies.scala:188)
at org.apache.spark.sql.SQLContext$SparkPlanner.pruneFilterProject(SQLContext.scala:364)
at org.apache.spark.sql.hive.HiveStrategies$HiveTableScans$.apply(HiveStrategies.scala:184)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:58)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:58)
at scala.collection.Iterator$$anon$13.hasNext(Iterator.scala:371)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.apply(QueryPlanner.scala:59)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.planLater(QueryPlanner.scala:54)
at org.apache.spark.sql.execution.SparkStrategies$BasicOperators$.apply(SparkStrategies.scala:280)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:58)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:58)
at scala.collection.Iterator$$anon$13.hasNext(Iterator.scala:371)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.apply(QueryPlanner.scala:59)
at org.apache.spark.sql.SQLContext$QueryExecution.sparkPlan$lzycompute(SQLContext.scala:402)
at org.apache.spark.sql.SQLContext$QueryExecution.sparkPlan(SQLContext.scala:400)
at org.apache.spark.sql.SQLContext$QueryExecution.executedPlan$lzycompute(SQLContext.scala:406)
at org.apache.spark.sql.SQLContext$QueryExecution.executedPlan(SQLContext.scala:406)
at org.apache.spark.sql.hive.HiveContext$QueryExecution.stringResult(HiveContext.scala:406)
at org.apache.spark.sql.hive.thriftserver.SparkSQLDriver.run(SparkSQLDriver.scala:59)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.processCmd(SparkSQLCLIDriver.scala:291)
at org.apache.hadoop.hive.cli.CliDriver.processLine(CliDriver.java:413)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver$.main(SparkSQLCLIDriver.scala:226)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.main(SparkSQLCLIDriver.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.apache.spark.deploy.SparkSubmit$.launch(SparkSubmit.scala:328)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:75)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.lang.NullPointerException
Author: chirag <chirag.aggarwal@guavus.com>
Closes#2674 from chiragaggarwal/branch-1.1 and squashes the following commits:
370c31b [chirag] SPARK-3807: Add a test case to validate the fix.
1f26805 [chirag] SPARK-3807: SparkSql does not work for tables created using custom serde (Incorporated Review Comments)
ba4bc0c [chirag] SPARK-3807: SparkSql does not work for tables created using custom serde
5c73b72 [chirag] SPARK-3807: SparkSql does not work for tables created using custom serde
(cherry picked from commit 925e22d313)
Signed-off-by: Michael Armbrust <michael@databricks.com>
Author: Venkata Ramana G <ramana.gollamudihuawei.com>
Author: Venkata Ramana Gollamudi <ramana.gollamudi@huawei.com>
Closes#2713 from gvramana/remove_unnecessary_columns and squashes the following commits:
b7ba768 [Venkata Ramana Gollamudi] Added comment and checkstyle fix
6a93459 [Venkata Ramana Gollamudi] cloned hiveconf for each TableScanOperators so that only required columns are added
There are lots of temporal files created by TestHive under the /tmp by default, which may cause potential performance issue for testing. This PR will automatically delete them after test exit.
Author: Cheng Hao <hao.cheng@intel.com>
Closes#2393 from chenghao-intel/delete_temp_on_exit and squashes the following commits:
3a6511f [Cheng Hao] Remove the temp dir after text exit
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#2344 from adrian-wang/date and squashes the following commits:
f15074a [Daoyuan Wang] remove outdated lines
2038085 [Daoyuan Wang] update return type
00fe81f [Daoyuan Wang] address lian cheng's comments
0df6ea1 [Daoyuan Wang] rebase and remove simple string
bb1b1ef [Daoyuan Wang] remove failing test
aa96735 [Daoyuan Wang] not cast for same type compare
30bf48b [Daoyuan Wang] resolve rebase conflict
617d1a8 [Daoyuan Wang] add date_udf case to white list
c37e848 [Daoyuan Wang] comment update
5429212 [Daoyuan Wang] change to long
f8f219f [Daoyuan Wang] revise according to Cheng Hao
0e0a4f5 [Daoyuan Wang] minor format
4ddcb92 [Daoyuan Wang] add java api for date
0e3110e [Daoyuan Wang] try to fix timezone issue
17fda35 [Daoyuan Wang] set test list
2dfbb5b [Daoyuan Wang] support date type
The queries like SELECT a.key FROM (SELECT key FROM src) \`a\` does not work as backticks in subquery aliases are not handled properly. This PR fixes that.
Author : ravipesala ravindra.pesalahuawei.com
Author: ravipesala <ravindra.pesala@huawei.com>
Closes#2737 from ravipesala/SPARK-3834 and squashes the following commits:
0e0ab98 [ravipesala] Fixing issue in backtick handling for subquery aliases
This PR is a follow up of #2590, and tries to introduce a top level SQL parser entry point for all SQL dialects supported by Spark SQL.
A top level parser `SparkSQLParser` is introduced to handle the syntaxes that all SQL dialects should recognize (e.g. `CACHE TABLE`, `UNCACHE TABLE` and `SET`, etc.). For all the syntaxes this parser doesn't recognize directly, it fallbacks to a specified function that tries to parse arbitrary input to a `LogicalPlan`. This function is typically another parser combinator like `SqlParser`. DDL syntaxes introduced in #2475 can be moved to here.
The `ExtendedHiveQlParser` now only handle Hive specific extensions.
Also took the chance to refactor/reformat `SqlParser` for better readability.
Author: Cheng Lian <lian.cs.zju@gmail.com>
Closes#2698 from liancheng/gen-sql-parser and squashes the following commits:
ceada76 [Cheng Lian] Minor styling fixes
9738934 [Cheng Lian] Minor refactoring, removes optional trailing ";" in the parser
bb2ab12 [Cheng Lian] SET property value can be empty string
ce8860b [Cheng Lian] Passes test suites
e86968e [Cheng Lian] Removes debugging code
8bcace5 [Cheng Lian] Replaces digit.+ to rep1(digit) (Scala style checking doesn't like it)
d15d54f [Cheng Lian] Unifies SQL and HiveQL parsers
Author: Vida Ha <vida@databricks.com>
Closes#2621 from vidaha/vida/SPARK-3752 and squashes the following commits:
d7fdbbc [Vida Ha] Add tests for different UDF's
Author: Reynold Xin <rxin@apache.org>
Closes#2719 from rxin/sql-join-break and squashes the following commits:
0c0082b [Reynold Xin] Fix line length.
cbc664c [Reynold Xin] Rename join -> joins package.
a070d44 [Reynold Xin] Fix line length in HashJoin
a39be8c [Reynold Xin] [SPARK-3857] Create a join package for various join operators.
Builds all wrappers at first according to object inspector types to avoid per row costs.
Author: Cheng Lian <lian.cs.zju@gmail.com>
Closes#2592 from liancheng/hive-value-wrapper and squashes the following commits:
9696559 [Cheng Lian] Passes all tests
4998666 [Cheng Lian] Prevents per row dynamic dispatching and pattern matching when inserting Hive values
Includes partition keys into account when applying `PreInsertionCasts` rule.
Author: Cheng Lian <lian.cs.zju@gmail.com>
Closes#2672 from liancheng/fix-pre-insert-casts and squashes the following commits:
def1a1a [Cheng Lian] Makes PreInsertionCasts handle partitions properly
Although lazy caching for in-memory table seems consistent with the `RDD.cache()` API, it's relatively confusing for users who mainly work with SQL and not familiar with Spark internals. The `CACHE TABLE t; SELECT COUNT(*) FROM t;` pattern is also commonly seen just to ensure predictable performance.
This PR makes both the `CACHE TABLE t [AS SELECT ...]` statement and the `SQLContext.cacheTable()` API eager by default, and adds a new `CACHE LAZY TABLE t [AS SELECT ...]` syntax to provide lazy in-memory table caching.
Also, took the chance to make some refactoring: `CacheCommand` and `CacheTableAsSelectCommand` are now merged and renamed to `CacheTableCommand` since the former is strictly a special case of the latter. A new `UncacheTableCommand` is added for the `UNCACHE TABLE t` statement.
Author: Cheng Lian <lian.cs.zju@gmail.com>
Closes#2513 from liancheng/eager-caching and squashes the following commits:
fe92287 [Cheng Lian] Makes table caching eager by default and adds syntax for lazy caching
Do not use TestSQLContext in JavaHiveQLSuite, that may lead to two SparkContexts in one jvm and enable JavaHiveQLSuite
Author: scwf <wangfei1@huawei.com>
Closes#2652 from scwf/fix-JavaHiveQLSuite and squashes the following commits:
be35c91 [scwf] enable JavaHiveQLSuite
It should just use `maxResults` there.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#2654 from viirya/trivial_fix and squashes the following commits:
1362289 [Liang-Chi Hsieh] Trivial fix to make codes more readable.
This is a follow up of #2226 and #2616 to fix Jenkins master SBT build failures for lower Hadoop versions (1.0.x and 2.0.x).
The root cause is the semantics difference of `FileSystem.globStatus()` between different versions of Hadoop, as illustrated by the following test code:
```scala
object GlobExperiments extends App {
val conf = new Configuration()
val fs = FileSystem.getLocal(conf)
fs.globStatus(new Path("/tmp/wh/*/*/*")).foreach { status =>
println(status.getPath)
}
}
```
Target directory structure:
```
/tmp/wh
├── dir0
│ ├── dir1
│ │ └── level2
│ └── level1
└── level0
```
Hadoop 2.4.1 result:
```
file:/tmp/wh/dir0/dir1/level2
```
Hadoop 1.0.4 resuet:
```
file:/tmp/wh/dir0/dir1/level2
file:/tmp/wh/dir0/level1
file:/tmp/wh/level0
```
In #2226 and #2616, we call `FileOutputCommitter.commitJob()` at the end of the job, and the `_SUCCESS` mark file is written. When working with lower Hadoop versions, due to the `globStatus()` semantics issue, `_SUCCESS` is included as a separate partition data file by `Hive.loadDynamicPartitions()`, and fails partition spec checking. The fix introduced in this PR is kind of a hack: when inserting data with dynamic partitioning, we intentionally avoid writing the `_SUCCESS` marker to workaround this issue.
Hive doesn't suffer this issue because `FileSinkOperator` doesn't call `FileOutputCommitter.commitJob()`, instead, it calls `Utilities.mvFileToFinalPath()` to cleanup the output directory and then loads it into Hive warehouse by with `loadDynamicPartitions()`/`loadPartition()`/`loadTable()`. This approach is better because it handles failed job and speculative tasks properly. We should add this step to `InsertIntoHiveTable` in another PR.
Author: Cheng Lian <lian.cs.zju@gmail.com>
Closes#2663 from liancheng/dp-hadoop-1-fix and squashes the following commits:
0177dae [Cheng Lian] Fixes dynamic partitioning support for lower Hadoop versions
_Also addresses: SPARK-1671, SPARK-1379 and SPARK-3641_
This PR introduces a new trait, `CacheManger`, which replaces the previous temporary table based caching system. Instead of creating a temporary table that shadows an existing table with and equivalent cached representation, the cached manager maintains a separate list of logical plans and their cached data. After optimization, this list is searched for any matching plan fragments. When a matching plan fragment is found it is replaced with the cached data.
There are several advantages to this approach:
- Calling .cache() on a SchemaRDD now works as you would expect, and uses the more efficient columnar representation.
- Its now possible to provide a list of temporary tables, without having to decide if a given table is actually just a cached persistent table. (To be done in a follow-up PR)
- In some cases it is possible that cached data will be used, even if a cached table was not explicitly requested. This is because we now look at the logical structure instead of the table name.
- We now correctly invalidate when data is inserted into a hive table.
Author: Michael Armbrust <michael@databricks.com>
Closes#2501 from marmbrus/caching and squashes the following commits:
63fbc2c [Michael Armbrust] Merge remote-tracking branch 'origin/master' into caching.
0ea889e [Michael Armbrust] Address comments.
1e23287 [Michael Armbrust] Add support for cache invalidation for hive inserts.
65ed04a [Michael Armbrust] fix tests.
bdf9a3f [Michael Armbrust] Merge remote-tracking branch 'origin/master' into caching
b4b77f2 [Michael Armbrust] Address comments
6923c9d [Michael Armbrust] More comments / tests
80f26ac [Michael Armbrust] First draft of improved semantics for Spark SQL caching.
PR #2226 was reverted because it broke Jenkins builds for unknown reason. This debugging PR aims to fix the Jenkins build.
This PR also fixes two bugs:
1. Compression configurations in `InsertIntoHiveTable` are disabled by mistake
The `FileSinkDesc` object passed to the writer container doesn't have compression related configurations. These configurations are not taken care of until `saveAsHiveFile` is called. This PR moves compression code forward, right after instantiation of the `FileSinkDesc` object.
1. `PreInsertionCasts` doesn't take table partitions into account
In `castChildOutput`, `table.attributes` only contains non-partition columns, thus for partitioned table `childOutputDataTypes` never equals to `tableOutputDataTypes`. This results funny analyzed plan like this:
```
== Analyzed Logical Plan ==
InsertIntoTable Map(partcol1 -> None, partcol2 -> None), false
MetastoreRelation default, dynamic_part_table, None
Project [c_0#1164,c_1#1165,c_2#1166]
Project [c_0#1164,c_1#1165,c_2#1166]
Project [c_0#1164,c_1#1165,c_2#1166]
... (repeats 99 times) ...
Project [c_0#1164,c_1#1165,c_2#1166]
Project [c_0#1164,c_1#1165,c_2#1166]
Project [1 AS c_0#1164,1 AS c_1#1165,1 AS c_2#1166]
Filter (key#1170 = 150)
MetastoreRelation default, src, None
```
Awful though this logical plan looks, it's harmless because all projects will be eliminated by optimizer. Guess that's why this issue hasn't been caught before.
Author: Cheng Lian <lian.cs.zju@gmail.com>
Author: baishuo(白硕) <vc_java@hotmail.com>
Author: baishuo <vc_java@hotmail.com>
Closes#2616 from liancheng/dp-fix and squashes the following commits:
21935b6 [Cheng Lian] Adds back deleted trailing space
f471c4b [Cheng Lian] PreInsertionCasts should take table partitions into account
a132c80 [Cheng Lian] Fixes output compression
9c6eb2d [Cheng Lian] Adds tests to verify dynamic partitioning folder layout
0eed349 [Cheng Lian] Addresses @yhuai's comments
26632c3 [Cheng Lian] Adds more tests
9227181 [Cheng Lian] Minor refactoring
c47470e [Cheng Lian] Refactors InsertIntoHiveTable to a Command
6fb16d7 [Cheng Lian] Fixes typo in test name, regenerated golden answer files
d53daa5 [Cheng Lian] Refactors dynamic partitioning support
b821611 [baishuo] pass check style
997c990 [baishuo] use HiveConf.DEFAULTPARTITIONNAME to replace hive.exec.default.partition.name
761ecf2 [baishuo] modify according micheal's advice
207c6ac [baishuo] modify for some bad indentation
caea6fb [baishuo] modify code to pass scala style checks
b660e74 [baishuo] delete a empty else branch
cd822f0 [baishuo] do a little modify
8e7268c [baishuo] update file after test
3f91665 [baishuo(白硕)] Update Cast.scala
8ad173c [baishuo(白硕)] Update InsertIntoHiveTable.scala
051ba91 [baishuo(白硕)] Update Cast.scala
d452eb3 [baishuo(白硕)] Update HiveQuerySuite.scala
37c603b [baishuo(白硕)] Update InsertIntoHiveTable.scala
98cfb1f [baishuo(白硕)] Update HiveCompatibilitySuite.scala
6af73f4 [baishuo(白硕)] Update InsertIntoHiveTable.scala
adf02f1 [baishuo(白硕)] Update InsertIntoHiveTable.scala
1867e23 [baishuo(白硕)] Update SparkHadoopWriter.scala
6bb5880 [baishuo(白硕)] Update HiveQl.scala
Implemented UDAF Hive aggregates by adding wrapper to Spark Hive.
Author: ravipesala <ravindra.pesala@huawei.com>
Closes#2620 from ravipesala/SPARK-2693 and squashes the following commits:
a8df326 [ravipesala] Removed resolver from constructor arguments
caf25c6 [ravipesala] Fixed style issues
5786200 [ravipesala] Supported for UDAF Hive Aggregates like PERCENTILE
Created separate parser for hql. It preparses the commands like cache,uncache,add jar etc.. and then parses with HiveQl
Author: ravipesala <ravindra.pesala@huawei.com>
Closes#2590 from ravipesala/SPARK-3654 and squashes the following commits:
bbca7dd [ravipesala] Fixed code as per admin comments.
ae9290a [ravipesala] Fixed style issues as per Admin comments
898ed81 [ravipesala] Removed spaces
fb24edf [ravipesala] Updated the code as per admin comments
8947d37 [ravipesala] Removed duplicate code
ba26cd1 [ravipesala] Created seperate parser for hql.It pre parses the commands like cache,uncache,add jar etc.. and then parses with HiveQl
With the old ordering it was possible for commands in the HiveDriver to NPE due to the lack of configuration in the threadlocal session state.
Author: Michael Armbrust <michael@databricks.com>
Closes#2635 from marmbrus/initOrder and squashes the following commits:
9749850 [Michael Armbrust] Initilize session state before creating CommandProcessor
This change avoids a NPE during context initialization when settings are present.
Author: Michael Armbrust <michael@databricks.com>
Closes#2583 from marmbrus/configNPE and squashes the following commits:
da2ec57 [Michael Armbrust] Do all hive session state initilialization in lazy val
Considering `Command.executeCollect()` simply delegates to `Command.sideEffectResult`, we no longer need to leave the latter `protected[sql]`.
Author: Cheng Lian <lian.cs.zju@gmail.com>
Closes#2431 from liancheng/narrow-scope and squashes the following commits:
1bfc16a [Cheng Lian] Made Command.sideEffectResult protected
add case for VoidObjectInspector in ```inspectorToDataType```
Author: scwf <wangfei1@huawei.com>
Closes#2552 from scwf/inspectorToDataType and squashes the following commits:
453d892 [scwf] add case for VoidObjectInspector
The below query gives error
sql("SELECT k FROM (SELECT \`key\` AS \`k\` FROM src) a")
It gives error because the aliases are not cleaned so it could not be resolved in further processing.
Author: ravipesala <ravindra.pesala@huawei.com>
Closes#2594 from ravipesala/SPARK-3708 and squashes the following commits:
d55db54 [ravipesala] Fixed SPARK-3708 (Backticks aren't handled correctly is aliases)
Author: Michael Armbrust <michael@databricks.com>
Closes#2598 from marmbrus/hiveClientLock and squashes the following commits:
ca89fe8 [Michael Armbrust] Lock hive client when creating tables
MD5 of query strings in `createQueryTest` calls are used to generate golden files, leaving trailing spaces there can be really dangerous. Got bitten by this while working on #2616: my "smart" IDE automatically removed a trailing space and makes Jenkins fail.
(Really should add "no trailing space" to our coding style guidelines!)
Author: Cheng Lian <lian.cs.zju@gmail.com>
Closes#2619 from liancheng/kill-trailing-space and squashes the following commits:
034f119 [Cheng Lian] Kill dangerous trailing space in query string
Thread names are useful for correlating failures.
Author: Reynold Xin <rxin@apache.org>
Closes#2600 from rxin/log4j and squashes the following commits:
83ffe88 [Reynold Xin] [SPARK-3748] Log thread name in unit test logs
Typing of UDFs should be lazy as it is often not valid to call `dataType` on an expression until after all of its children are `resolved`.
Author: Michael Armbrust <michael@databricks.com>
Closes#2525 from marmbrus/concatBug and squashes the following commits:
5b8efe7 [Michael Armbrust] fix bug with eager typing of udfs
This is a bug in JDK6: http://bugs.java.com/bugdatabase/view_bug.do?bug_id=4428022
this is because jdk get different result to operate ```double```,
```System.out.println(1/500d)``` in different jdk get different result
jdk 1.6.0(_31) ---- 0.0020
jdk 1.7.0(_05) ---- 0.002
this leads to HiveQuerySuite failed when generate golden answer in jdk 1.7 and run tests in jdk 1.6, result did not match
Author: w00228970 <wangfei1@huawei.com>
Closes#2517 from scwf/HiveQuerySuite and squashes the following commits:
0cb5e8d [w00228970] delete golden answer of division-0 and timestamp cast #1
1df3964 [w00228970] Jdk version leads to different query output for Double, this make HiveQuerySuite failed
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#2396 from adrian-wang/selectnull and squashes the following commits:
2458229 [Daoyuan Wang] rebase solution
Since we have moved to `ConventionHelper`, it is quite easy to avoid call `javaClassToDataType` in hive simple udf. This will solve SPARK-3582.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#2506 from adrian-wang/spark3582 and squashes the following commits:
450c28e [Daoyuan Wang] not limit argument type for hive simple udf
this patch fixes timestamp smaller than 0 and cast int as timestamp
select cast(1000 as timestamp) from src limit 1;
should return 1970-01-01 00:00:01, but we now take it as 1000 seconds.
also, current implementation has bug when the time is before 1970-01-01 00:00:00.
rxin marmbrus chenghao-intel
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#2458 from adrian-wang/timestamp and squashes the following commits:
4274b1d [Daoyuan Wang] set test not related to timezone
1234f66 [Daoyuan Wang] fix timestamp smaller than 0 and cast int as timestamp
**This PR introduces a subtle change in semantics for HiveContext when using the results in Python or Scala. Specifically, while resolution remains case insensitive, it is now case preserving.**
_This PR is a follow up to #2293 (and to a lesser extent #2262#2334)._
In #2293 the catalog was changed to store analyzed logical plans instead of unresolved ones. While this change fixed the reported bug (which was caused by yet another instance of us forgetting to put in a `LowerCaseSchema` operator) it had the consequence of breaking assumptions made by `MultiInstanceRelation`. Specifically, we can't replace swap out leaf operators in a tree without rewriting changed expression ids (which happens when you self join the same RDD that has been registered as a temp table).
In this PR, I instead remove the need to insert `LowerCaseSchema` operators at all, by moving the concern of matching up identifiers completely into analysis. Doing so allows the test cases from both #2293 and #2262 to pass at the same time (and likely fixes a slew of other "unknown unknown" bugs).
While it is rolled back in this PR, storing the analyzed plan might actually be a good idea. For instance, it is kind of confusing if you register a temporary table, change the case sensitivity of resolution and now you can't query that table anymore. This can be addressed in a follow up PR.
Follow-ups:
- Configurable case sensitivity
- Consider storing analyzed plans for temp tables
Author: Michael Armbrust <michael@databricks.com>
Closes#2382 from marmbrus/lowercase and squashes the following commits:
c21171e [Michael Armbrust] Ensure the resolver is used for field lookups and ensure that case insensitive resolution is still case preserving.
d4320f1 [Michael Armbrust] Merge remote-tracking branch 'origin/master' into lowercase
2de881e [Michael Armbrust] Address comments.
219805a [Michael Armbrust] style
5b93711 [Michael Armbrust] Replace LowerCaseSchema with Resolver.
This is just another solution to SPARK-3485, in addition to PR #2355
In this patch, we will use ConventionHelper and FunctionRegistry to invoke a simple udf evaluation, which rely more on hive, but much cleaner and safer.
We can discuss which one is better.
Author: Daoyuan Wang <daoyuan.wang@intel.com>
Closes#2407 from adrian-wang/simpleudf and squashes the following commits:
15762d2 [Daoyuan Wang] add posmod test which would fail the test but now ok
0d69eb4 [Daoyuan Wang] another way to pass to hive simple udf
