Commit graph

574 commits

Author SHA1 Message Date
Jose Torres 49b0207dc9 [SPARK-23196] Unify continuous and microbatch V2 sinks
## What changes were proposed in this pull request?

Replace streaming V2 sinks with a unified StreamWriteSupport interface, with a shim to use it with microbatch execution.

Add a new SQL config to use for disabling V2 sinks, falling back to the V1 sink implementation.

## How was this patch tested?

Existing tests, which in the case of Kafka (the only existing continuous V2 sink) now use V2 for microbatch.

Author: Jose Torres <jose@databricks.com>

Closes #20369 from jose-torres/streaming-sink.
2018-01-29 13:10:38 +08:00
Shixiong Zhu 073744985f [SPARK-23242][SS][TESTS] Don't run tests in KafkaSourceSuiteBase twice
## What changes were proposed in this pull request?

KafkaSourceSuiteBase should be abstract class, otherwise KafkaSourceSuiteBase will also run.

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <zsxwing@gmail.com>

Closes #20412 from zsxwing/SPARK-23242.
2018-01-26 16:09:57 -08:00
Dongjoon Hyun bc9641d902 [SPARK-23198][SS][TEST] Fix KafkaContinuousSourceStressForDontFailOnDataLossSuite to test ContinuousExecution
## What changes were proposed in this pull request?

Currently, `KafkaContinuousSourceStressForDontFailOnDataLossSuite` runs on `MicroBatchExecution`. It should test `ContinuousExecution`.

## How was this patch tested?

Pass the updated test suite.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #20374 from dongjoon-hyun/SPARK-23198.
2018-01-24 12:58:44 -08:00
Jacek Laskowski 76b8b840dd [MINOR] Typo fixes
## What changes were proposed in this pull request?

Typo fixes

## How was this patch tested?

Local build / Doc-only changes

Author: Jacek Laskowski <jacek@japila.pl>

Closes #20344 from jaceklaskowski/typo-fixes.
2018-01-22 13:55:14 -06:00
Jose Torres 86a8450318 [SPARK-23033][SS] Don't use task level retry for continuous processing
## What changes were proposed in this pull request?

Continuous processing tasks will fail on any attempt number greater than 0. ContinuousExecution will catch these failures and restart globally from the last recorded checkpoints.
## How was this patch tested?
unit test

Author: Jose Torres <jose@databricks.com>

Closes #20225 from jose-torres/no-retry.
2018-01-17 13:52:51 -08:00
Jose Torres a963980a6d Fix merge between 07ae39d0ec and 1667057851
## What changes were proposed in this pull request?

The first commit added a new test, and the second refactored the class the test was in. The automatic merge put the test in the wrong place.

## How was this patch tested?
-

Author: Jose Torres <jose@databricks.com>

Closes #20289 from jose-torres/fix.
2018-01-16 22:27:28 -08:00
Jose Torres 1667057851 [SPARK-22908][SS] Roll forward continuous processing Kafka support with fix to continuous Kafka data reader
## What changes were proposed in this pull request?

The Kafka reader is now interruptible and can close itself.
## How was this patch tested?

I locally ran one of the ContinuousKafkaSourceSuite tests in a tight loop. Before the fix, my machine ran out of open file descriptors a few iterations in; now it works fine.

Author: Jose Torres <jose@databricks.com>

Closes #20253 from jose-torres/fix-data-reader.
2018-01-16 18:11:27 -08:00
Yuanjian Li 07ae39d0ec [SPARK-22956][SS] Bug fix for 2 streams union failover scenario
## What changes were proposed in this pull request?

This problem reported by yanlin-Lynn ivoson and LiangchangZ. Thanks!

When we union 2 streams from kafka or other sources, while one of them have no continues data coming and in the same time task restart, this will cause an `IllegalStateException`. This mainly cause because the code in [MicroBatchExecution](https://github.com/apache/spark/blob/master/sql/core/src/main/scala/org/apache/spark/sql/execution/streaming/MicroBatchExecution.scala#L190) , while one stream has no continues data, its comittedOffset same with availableOffset during `populateStartOffsets`, and `currentPartitionOffsets` not properly handled in KafkaSource. Also, maybe we should also consider this scenario in other Source.

## How was this patch tested?

Add a UT in KafkaSourceSuite.scala

Author: Yuanjian Li <xyliyuanjian@gmail.com>

Closes #20150 from xuanyuanking/SPARK-22956.
2018-01-15 22:01:14 -08:00
Dongjoon Hyun 7a3d0aad2b [SPARK-23038][TEST] Update docker/spark-test (JDK/OS)
## What changes were proposed in this pull request?

This PR aims to update the followings in `docker/spark-test`.

- JDK7 -> JDK8
Spark 2.2+ supports JDK8 only.

- Ubuntu 12.04.5 LTS(precise) -> Ubuntu 16.04.3 LTS(xeniel)
The end of life of `precise` was April 28, 2017.

## How was this patch tested?

Manual.

* Master
```
$ cd external/docker
$ ./build
$ export SPARK_HOME=...
$ docker run -v $SPARK_HOME:/opt/spark spark-test-master
CONTAINER_IP=172.17.0.3
...
18/01/11 06:50:25 INFO MasterWebUI: Bound MasterWebUI to 172.17.0.3, and started at http://172.17.0.3:8080
18/01/11 06:50:25 INFO Utils: Successfully started service on port 6066.
18/01/11 06:50:25 INFO StandaloneRestServer: Started REST server for submitting applications on port 6066
18/01/11 06:50:25 INFO Master: I have been elected leader! New state: ALIVE
```

* Slave
```
$ docker run -v $SPARK_HOME:/opt/spark spark-test-worker spark://172.17.0.3:7077
CONTAINER_IP=172.17.0.4
...
18/01/11 06:51:54 INFO Worker: Successfully registered with master spark://172.17.0.3:7077
```

After slave starts, master will show
```
18/01/11 06:51:54 INFO Master: Registering worker 172.17.0.4:8888 with 4 cores, 1024.0 MB RAM
```

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #20230 from dongjoon-hyun/SPARK-23038.
2018-01-13 23:26:12 -08:00
Sameer Agarwal 55dbfbca37 Revert "[SPARK-22908] Add kafka source and sink for continuous processing."
This reverts commit 6f7aaed805.
2018-01-12 15:00:00 -08:00
gatorsmile 651f76153f [SPARK-23028] Bump master branch version to 2.4.0-SNAPSHOT
## What changes were proposed in this pull request?
This patch bumps the master branch version to `2.4.0-SNAPSHOT`.

## How was this patch tested?
N/A

Author: gatorsmile <gatorsmile@gmail.com>

Closes #20222 from gatorsmile/bump24.
2018-01-13 00:37:59 +08:00
Jose Torres 6f7aaed805 [SPARK-22908] Add kafka source and sink for continuous processing.
## What changes were proposed in this pull request?

Add kafka source and sink for continuous processing. This involves two small changes to the execution engine:

* Bring data reader close() into the normal data reader thread to avoid thread safety issues.
* Fix up the semantics of the RECONFIGURING StreamExecution state. State updates are now atomic, and we don't have to deal with swallowing an exception.

## How was this patch tested?

new unit tests

Author: Jose Torres <jose@databricks.com>

Closes #20096 from jose-torres/continuous-kafka.
2018-01-11 10:52:12 -08:00
Sean Owen c284c4e1f6 [MINOR] Fix a bunch of typos 2018-01-02 07:10:19 +09:00
Dongjoon Hyun 5536f3181c [MINOR][BUILD] Fix Java linter errors
## What changes were proposed in this pull request?

This PR cleans up a few Java linter errors for Apache Spark 2.3 release.

## How was this patch tested?

```bash
$ dev/lint-java
Using `mvn` from path: /usr/local/bin/mvn
Checkstyle checks passed.
```

We can see the result from [Travis CI](https://travis-ci.org/dongjoon-hyun/spark/builds/322470787), too.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #20101 from dongjoon-hyun/fix-java-lint.
2017-12-28 09:43:50 -06:00
Yash Sharma 0e6833006d [SPARK-20168][DSTREAM] Add changes to use kinesis fetches from specific timestamp
## What changes were proposed in this pull request?

Kinesis client can resume from a specified timestamp while creating a stream. We should have option to pass a timestamp in config to allow kinesis to resume from the given timestamp.

The patch introduces a new `KinesisInitialPositionInStream` that takes the `InitialPositionInStream` with the `timestamp` information that can be used to resume kinesis fetches from the provided timestamp.

## How was this patch tested?

Unit Tests

cc : budde brkyvz

Author: Yash Sharma <ysharma@atlassian.com>

Closes #18029 from yssharma/ysharma/kcl_resume.
2017-12-26 09:50:39 +02:00
Jose Torres 7798c9e6ef [SPARK-22824] Restore old offset for binary compatibility
## What changes were proposed in this pull request?

Some users depend on source compatibility with the org.apache.spark.sql.execution.streaming.Offset class. Although this is not a stable interface, we can keep it in place for now to simplify upgrades to 2.3.

Author: Jose Torres <jose@databricks.com>

Closes #20012 from joseph-torres/binary-compat.
2017-12-20 10:43:10 -08:00
Jose Torres f8c7c1f21a [SPARK-22732] Add Structured Streaming APIs to DataSourceV2
## What changes were proposed in this pull request?

This PR provides DataSourceV2 API support for structured streaming, including new pieces needed to support continuous processing [SPARK-20928]. High level summary:

- DataSourceV2 includes new mixins to support micro-batch and continuous reads and writes. For reads, we accept an optional user specified schema rather than using the ReadSupportWithSchema model, because doing so would severely complicate the interface.

- DataSourceV2Reader includes new interfaces to read a specific microbatch or read continuously from a given offset. These follow the same setter pattern as the existing Supports* mixins so that they can work with SupportsScanUnsafeRow.

- DataReader (the per-partition reader) has a new subinterface ContinuousDataReader only for continuous processing. This reader has a special method to check progress, and next() blocks for new input rather than returning false.

- Offset, an abstract representation of position in a streaming query, is ported to the public API. (Each type of reader will define its own Offset implementation.)

- DataSourceV2Writer has a new subinterface ContinuousWriter only for continuous processing. Commits to this interface come tagged with an epoch number, as the execution engine will continue to produce new epoch commits as the task continues indefinitely.

Note that this PR does not propose to change the existing DataSourceV2 batch API, or deprecate the existing streaming source/sink internal APIs in spark.sql.execution.streaming.

## How was this patch tested?

Toy implementations of the new interfaces with unit tests.

Author: Jose Torres <jose@databricks.com>

Closes #19925 from joseph-torres/continuous-api.
2017-12-13 22:31:39 -08:00
gatorsmile a4002651a3 [SPARK-20557][SQL] Only support TIMESTAMP WITH TIME ZONE for Oracle Dialect
## What changes were proposed in this pull request?
In the previous PRs, https://github.com/apache/spark/pull/17832 and https://github.com/apache/spark/pull/17835 , we convert `TIMESTAMP WITH TIME ZONE` and `TIME WITH TIME ZONE` to `TIMESTAMP` for all the JDBC sources. However, this conversion could be risky since it does not respect our SQL configuration `spark.sql.session.timeZone`.

In addition, each vendor might have different semantics for these two types. For example, Postgres simply returns `TIMESTAMP` types for `TIMESTAMP WITH TIME ZONE`. For such supports, we should do it case by case. This PR reverts the general support of `TIMESTAMP WITH TIME ZONE` and `TIME WITH TIME ZONE` for JDBC sources, except ORACLE Dialect.

When supporting the ORACLE's `TIMESTAMP WITH TIME ZONE`, we only support it when the JVM default timezone is the same as the user-specified configuration `spark.sql.session.timeZone` (whose default is the JVM default timezone). Now, we still treat `TIMESTAMP WITH TIME ZONE` as `TIMESTAMP` when fetching the values via the Oracle JDBC connector, whose client converts the timestamp values with time zone to the timestamp values using the local JVM default timezone (a test case is added to `OracleIntegrationSuite.scala` in this PR for showing the behavior). Thus, to avoid any future behavior change, we will not support it if JVM default timezone is different from `spark.sql.session.timeZone`

No regression because the previous two PRs were just merged to be unreleased master branch.

## How was this patch tested?
Added the test cases

Author: gatorsmile <gatorsmile@gmail.com>

Closes #19939 from gatorsmile/timezoneUpdate.
2017-12-11 16:33:06 -08:00
kellyzly f41c0a93fd [SPARK-22660][BUILD] Use position() and limit() to fix ambiguity issue in scala-2.12
…a-2.12 and JDK9

## What changes were proposed in this pull request?
Some compile error after upgrading to scala-2.12
```javascript
spark_source/core/src/main/scala/org/apache/spark/executor/Executor.scala:455: ambiguous reference to overloaded definition, method limit in class ByteBuffer of type (x$1: Int)java.nio.ByteBuffer
method limit in class Buffer of type ()Int
match expected type ?
     val resultSize = serializedDirectResult.limit
error
```
The limit method was moved from ByteBuffer to the superclass Buffer and it can no longer be called without (). The same reason for position method.

```javascript
/home/zly/prj/oss/jdk9_HOS_SOURCE/spark_source/sql/hive/src/main/scala/org/apache/spark/sql/hive/execution/ScriptTransformationExec.scala:427: ambiguous reference to overloaded definition, [error] both method putAll in class Properties of type (x$1: java.util.Map[_, _])Unit [error] and  method putAll in class Hashtable of type (x$1: java.util.Map[_ <: Object, _ <: Object])Unit [error] match argument types (java.util.Map[String,String])
 [error]       props.putAll(outputSerdeProps.toMap.asJava)
 [error]             ^
 ```
This is because the key type is Object instead of String which is unsafe.

## How was this patch tested?

running tests

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: kellyzly <kellyzly@126.com>

Closes #19854 from kellyzly/SPARK-22660.
2017-12-07 10:04:04 -06:00
Jen-Ming Chung bc7ca9786e [SPARK-22291][SQL] Conversion error when transforming array types of uuid, inet and cidr to StingType in PostgreSQL
## What changes were proposed in this pull request?

This PR fixes the conversion error when reads data from a PostgreSQL table that contains columns of `uuid[]`, `inet[]` and `cidr[]` data types.

For example, create a table with the uuid[] data type, and insert the test data.
```SQL
CREATE TABLE users
(
    id smallint NOT NULL,
    name character varying(50),
    user_ids uuid[],
    PRIMARY KEY (id)
)

INSERT INTO users ("id", "name","user_ids")
VALUES (1, 'foo', ARRAY
    ['7be8aaf8-650e-4dbb-8186-0a749840ecf2'
    ,'205f9bfc-018c-4452-a605-609c0cfad228']::UUID[]
)
```
Then it will throw the following exceptions when trying to load the data.
```
java.lang.ClassCastException: [Ljava.util.UUID; cannot be cast to [Ljava.lang.String;
    at org.apache.spark.sql.execution.datasources.jdbc.JdbcUtils$$anonfun$14.apply(JdbcUtils.scala:459)
    at org.apache.spark.sql.execution.datasources.jdbc.JdbcUtils$$anonfun$14.apply(JdbcUtils.scala:458)
...
```

## How was this patch tested?

Added test in `PostgresIntegrationSuite`.

Author: Jen-Ming Chung <jenmingisme@gmail.com>

Closes #19567 from jmchung/SPARK-22291.
2017-10-29 18:11:48 +01:00
Kohki Nishio 5a5b6b7851 [SPARK-22303][SQL] Handle Oracle specific jdbc types in OracleDialect
TIMESTAMP (-101), BINARY_DOUBLE (101) and BINARY_FLOAT (100) are handled in OracleDialect

## What changes were proposed in this pull request?

When a oracle table contains columns whose type is BINARY_FLOAT or BINARY_DOUBLE, spark sql fails to load a table with SQLException

```
java.sql.SQLException: Unsupported type 101
 at org.apache.spark.sql.execution.datasources.jdbc.JdbcUtils$.org$apache$spark$sql$execution$datasources$jdbc$JdbcUtils$$getCatalystType(JdbcUtils.scala:235)
 at org.apache.spark.sql.execution.datasources.jdbc.JdbcUtils$$anonfun$8.apply(JdbcUtils.scala:292)
 at org.apache.spark.sql.execution.datasources.jdbc.JdbcUtils$$anonfun$8.apply(JdbcUtils.scala:292)
 at scala.Option.getOrElse(Option.scala:121)
 at org.apache.spark.sql.execution.datasources.jdbc.JdbcUtils$.getSchema(JdbcUtils.scala:291)
 at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.resolveTable(JDBCRDD.scala:64)
 at org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation.<init>(JDBCRelation.scala:113)
 at org.apache.spark.sql.execution.datasources.jdbc.JdbcRelationProvider.createRelation(JdbcRelationProvider.scala:47)
 at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:306)
 at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:178)
 at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:146)
```

## How was this patch tested?

I updated a UT which covers type conversion test for types (-101, 100, 101), on top of that I tested this change against actual table with those columns and it was able to read and write to the table.

Author: Kohki Nishio <taroplus@me.com>

Closes #19548 from taroplus/oracle_sql_types_101.
2017-10-23 09:55:46 -07:00
Sean Owen 0c03297bf0 [SPARK-22142][BUILD][STREAMING] Move Flume support behind a profile, take 2
## What changes were proposed in this pull request?

Move flume behind a profile, take 2. See https://github.com/apache/spark/pull/19365 for most of the back-story.

This change should fix the problem by removing the examples module dependency and moving Flume examples to the module itself. It also adds deprecation messages, per a discussion on dev about deprecating for 2.3.0.

## How was this patch tested?

Existing tests, which still enable flume integration.

Author: Sean Owen <sowen@cloudera.com>

Closes #19412 from srowen/SPARK-22142.2.
2017-10-06 15:08:28 +01:00
Sean Owen 576c43fb42 [SPARK-22087][SPARK-14650][WIP][BUILD][REPL][CORE] Compile Spark REPL for Scala 2.12 + other 2.12 fixes
## What changes were proposed in this pull request?

Enable Scala 2.12 REPL. Fix most remaining issues with 2.12 compilation and warnings, including:

- Selecting Kafka 0.10.1+ for Scala 2.12 and patching over a minor API difference
- Fixing lots of "eta expansion of zero arg method deprecated" warnings
- Resolving the SparkContext.sequenceFile implicits compile problem
- Fixing an odd but valid jetty-server missing dependency in hive-thriftserver

## How was this patch tested?

Existing tests

Author: Sean Owen <sowen@cloudera.com>

Closes #19307 from srowen/Scala212.
2017-09-24 09:40:13 +01:00
Yuming Wang 17edfec59d [SPARK-20427][SQL] Read JDBC table use custom schema
## What changes were proposed in this pull request?

Auto generated Oracle schema some times not we expect:

- `number(1)` auto mapped to BooleanType, some times it's not we expect, per [SPARK-20921](https://issues.apache.org/jira/browse/SPARK-20921).
-  `number` auto mapped to Decimal(38,10), It can't read big data, per [SPARK-20427](https://issues.apache.org/jira/browse/SPARK-20427).

This PR fix this issue by custom schema as follows:
```scala
val props = new Properties()
props.put("customSchema", "ID decimal(38, 0), N1 int, N2 boolean")
val dfRead = spark.read.schema(schema).jdbc(jdbcUrl, "tableWithCustomSchema", props)
dfRead.show()
```
or
```sql
CREATE TEMPORARY VIEW tableWithCustomSchema
USING org.apache.spark.sql.jdbc
OPTIONS (url '$jdbcUrl', dbTable 'tableWithCustomSchema', customSchema'ID decimal(38, 0), N1 int, N2 boolean')
```

## How was this patch tested?

unit tests

Author: Yuming Wang <wgyumg@gmail.com>

Closes #18266 from wangyum/SPARK-20427.
2017-09-13 16:34:17 -07:00
Sean Owen 4fbf748bf8 [SPARK-21893][BUILD][STREAMING][WIP] Put Kafka 0.8 behind a profile
## What changes were proposed in this pull request?

Put Kafka 0.8 support behind a kafka-0-8 profile.

## How was this patch tested?

Existing tests, but, until PR builder and Jenkins configs are updated the effect here is to not build or test Kafka 0.8 support at all.

Author: Sean Owen <sowen@cloudera.com>

Closes #19134 from srowen/SPARK-21893.
2017-09-13 10:10:40 +01:00
caoxuewen dc74c0e67d [MINOR][SQL] remove unuse import class
## What changes were proposed in this pull request?

this PR describe remove the import class that are unused.

## How was this patch tested?

N/A

Author: caoxuewen <cao.xuewen@zte.com.cn>

Closes #19131 from heary-cao/unuse_import.
2017-09-11 10:09:20 +01:00
Sean Owen 12ab7f7e89 [SPARK-14280][BUILD][WIP] Update change-version.sh and pom.xml to add Scala 2.12 profiles and enable 2.12 compilation
…build; fix some things that will be warnings or errors in 2.12; restore Scala 2.12 profile infrastructure

## What changes were proposed in this pull request?

This change adds back the infrastructure for a Scala 2.12 build, but does not enable it in the release or Python test scripts.

In order to make that meaningful, it also resolves compile errors that the code hits in 2.12 only, in a way that still works with 2.11.

It also updates dependencies to the earliest minor release of dependencies whose current version does not yet support Scala 2.12. This is in a sense covered by other JIRAs under the main umbrella, but implemented here. The versions below still work with 2.11, and are the _latest_ maintenance release in the _earliest_ viable minor release.

- Scalatest 2.x -> 3.0.3
- Chill 0.8.0 -> 0.8.4
- Clapper 1.0.x -> 1.1.2
- json4s 3.2.x -> 3.4.2
- Jackson 2.6.x -> 2.7.9 (required by json4s)

This change does _not_ fully enable a Scala 2.12 build:

- It will also require dropping support for Kafka before 0.10. Easy enough, just didn't do it yet here
- It will require recreating `SparkILoop` and `Main` for REPL 2.12, which is SPARK-14650. Possible to do here too.

What it does do is make changes that resolve much of the remaining gap without affecting the current 2.11 build.

## How was this patch tested?

Existing tests and build. Manually tested with `./dev/change-scala-version.sh 2.12` to verify it compiles, modulo the exceptions above.

Author: Sean Owen <sowen@cloudera.com>

Closes #18645 from srowen/SPARK-14280.
2017-09-01 19:21:21 +01:00
Yuval Itzchakov 8f0df6bc10 [SPARK-21873][SS] - Avoid using return inside CachedKafkaConsumer.get
During profiling of a structured streaming application with Kafka as the source, I came across this exception:

![Structured Streaming Kafka Exceptions](https://user-images.githubusercontent.com/3448320/29743366-4149ef78-8a99-11e7-94d6-f0cbb691134a.png)

This is a 1 minute sample, which caused 106K `NonLocalReturnControl` exceptions to be thrown.
This happens because `CachedKafkaConsumer.get` is ran inside:

`private def runUninterruptiblyIfPossible[T](body: => T): T`

Where `body: => T` is the `get` method. Turning the method into a function means that in order to escape the `while` loop defined in `get` the runtime has to do dirty tricks which involve throwing the above exception.

## What changes were proposed in this pull request?

Instead of using `return` (which is generally not recommended in Scala), we place the result of the `fetchData` method inside a local variable and use a boolean flag to indicate the status of fetching data, which we monitor as our predicate to the `while` loop.

## How was this patch tested?

I've ran the `KafkaSourceSuite` to make sure regression passes. Since the exception isn't visible from user code, there is no way (at least that I could think of) to add this as a test to the existing suite.

Author: Yuval Itzchakov <yuval.itzchakov@clicktale.com>

Closes #19059 from YuvalItzchakov/master.
2017-08-30 10:33:23 +01:00
Jose Torres 3c0c2d09ca [SPARK-21765] Set isStreaming on leaf nodes for streaming plans.
## What changes were proposed in this pull request?
All streaming logical plans will now have isStreaming set. This involved adding isStreaming as a case class arg in a few cases, since a node might be logically streaming depending on where it came from.

## How was this patch tested?

Existing unit tests - no functional change is intended in this PR.

Author: Jose Torres <joseph-torres@databricks.com>
Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #18973 from joseph-torres/SPARK-21765.
2017-08-22 19:07:43 -07:00
Yuming Wang ba843292e3 [SPARK-21790][TESTS][FOLLOW-UP] Add filter pushdown verification back.
## What changes were proposed in this pull request?

The previous PR(https://github.com/apache/spark/pull/19000) removed filter pushdown verification, This PR add them back.

## How was this patch tested?
manual tests

Author: Yuming Wang <wgyumg@gmail.com>

Closes #19002 from wangyum/SPARK-21790-follow-up.
2017-08-21 10:16:56 -07:00
Yuming Wang 72b738d8dc [SPARK-21790][TESTS] Fix Docker-based Integration Test errors.
## What changes were proposed in this pull request?
[SPARK-17701](https://github.com/apache/spark/pull/18600/files#diff-b9f96d092fb3fea76bcf75e016799678L77) removed `metadata` function, this PR removed the Docker-based Integration module that has been relevant to `SparkPlan.metadata`.

## How was this patch tested?
manual tests

Author: Yuming Wang <wgyumg@gmail.com>

Closes #19000 from wangyum/SPARK-21709.
2017-08-19 11:41:32 -07:00
Marcelo Vanzin 3f958a9992 [SPARK-21731][BUILD] Upgrade scalastyle to 0.9.
This version fixes a few issues in the import order checker; it provides
better error messages, and detects more improper ordering (thus the need
to change a lot of files in this patch). The main fix is that it correctly
complains about the order of packages vs. classes.

As part of the above, I moved some "SparkSession" import in ML examples
inside the "$example on$" blocks; that didn't seem consistent across
different source files to start with, and avoids having to add more on/off blocks
around specific imports.

The new scalastyle also seems to have a better header detector, so a few
license headers had to be updated to match the expected indentation.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #18943 from vanzin/SPARK-21731.
2017-08-15 13:59:00 -07:00
Takeshi Yamamuro b78cf13bf0 [SPARK-21276][CORE] Update lz4-java to the latest (v1.4.0)
## What changes were proposed in this pull request?
This pr updated `lz4-java` to the latest (v1.4.0) and removed custom `LZ4BlockInputStream`. We currently use custom `LZ4BlockInputStream` to read concatenated byte stream in shuffle. But, this functionality has been implemented in the latest lz4-java (https://github.com/lz4/lz4-java/pull/105). So, we might update the latest to remove the custom `LZ4BlockInputStream`.

Major diffs between the latest release and v1.3.0 in the master are as follows (62f7547abb...6d4693f562);
- fixed NPE in XXHashFactory similarly
- Don't place resources in default package to support shading
- Fixes ByteBuffer methods failing to apply arrayOffset() for array-backed
- Try to load lz4-java from java.library.path, then fallback to bundled
- Add ppc64le binary
- Add s390x JNI binding
- Add basic LZ4 Frame v1.5.0 support
- enable aarch64 support for lz4-java
- Allow unsafeInstance() for ppc64le archiecture
- Add unsafeInstance support for AArch64
- Support 64-bit JNI build on Solaris
- Avoid over-allocating a buffer
- Allow EndMark to be incompressible for LZ4FrameInputStream.
- Concat byte stream

## How was this patch tested?
Existing tests.

Author: Takeshi Yamamuro <yamamuro@apache.org>

Closes #18883 from maropu/SPARK-21276.
2017-08-09 17:31:52 +02:00
Yash Sharma 4f77c06238 [SPARK-20855][Docs][DStream] Update the Spark kinesis docs to use the KinesisInputDStream builder instead of deprecated KinesisUtils
## What changes were proposed in this pull request?

The examples and docs for Spark-Kinesis integrations use the deprecated KinesisUtils. We should update the docs to use the KinesisInputDStream builder to create DStreams.

## How was this patch tested?

The patch primarily updates the documents. The patch will also need to make changes to the Spark-Kinesis examples. The examples need to be tested.

Author: Yash Sharma <ysharma@atlassian.com>

Closes #18071 from yssharma/ysharma/kinesis_docs.
2017-07-25 08:27:03 +01:00
Tim Van Wassenhove 03367d7aa3 [SPARK-21142][SS] spark-streaming-kafka-0-10 should depend on kafka-clients instead of full blown kafka library
## What changes were proposed in this pull request?

Currently spark-streaming-kafka-0-10 has a dependency on the full kafka distribution (but only uses and requires the kafka-clients library).

The PR fixes that (the library only depends on kafka-clients), and the tests depend on the full kafka.

## How was this patch tested?

All existing tests still pass.

Author: Tim Van Wassenhove <github@timvw.be>

Closes #18353 from timvw/master.
2017-07-20 18:19:14 +01:00
Sean Owen e26dac5feb [SPARK-21415] Triage scapegoat warnings, part 1
## What changes were proposed in this pull request?

Address scapegoat warnings for:
- BigDecimal double constructor
- Catching NPE
- Finalizer without super
- List.size is O(n)
- Prefer Seq.empty
- Prefer Set.empty
- reverse.map instead of reverseMap
- Type shadowing
- Unnecessary if condition.
- Use .log1p
- Var could be val

In some instances like Seq.empty, I avoided making the change even where valid in test code to keep the scope of the change smaller. Those issues are concerned with performance and it won't matter for tests.

## How was this patch tested?

Existing tests

Author: Sean Owen <sowen@cloudera.com>

Closes #18635 from srowen/Scapegoat1.
2017-07-18 08:47:17 +01:00
Sean Owen 425c4ada4c [SPARK-19810][BUILD][CORE] Remove support for Scala 2.10
## What changes were proposed in this pull request?

- Remove Scala 2.10 build profiles and support
- Replace some 2.10 support in scripts with commented placeholders for 2.12 later
- Remove deprecated API calls from 2.10 support
- Remove usages of deprecated context bounds where possible
- Remove Scala 2.10 workarounds like ScalaReflectionLock
- Other minor Scala warning fixes

## How was this patch tested?

Existing tests

Author: Sean Owen <sowen@cloudera.com>

Closes #17150 from srowen/SPARK-19810.
2017-07-13 17:06:24 +08:00
Rui Zha d4107196d5 [SPARK-18004][SQL] Make sure the date or timestamp related predicate can be pushed down to Oracle correctly
## What changes were proposed in this pull request?

Move `compileValue` method in JDBCRDD to JdbcDialect, and override the `compileValue` method in OracleDialect to rewrite the Oracle-specific timestamp and date literals in where clause.

## How was this patch tested?

An integration test has been added.

Author: Rui Zha <zrdt713@gmail.com>
Author: Zharui <zrdt713@gmail.com>

Closes #18451 from SharpRay/extend-compileValue-to-dialects.
2017-07-02 17:37:47 -07:00
Gabor Feher b837bf9ae9 [SPARK-20555][SQL] Fix mapping of Oracle DECIMAL types to Spark types in read path
## What changes were proposed in this pull request?

This PR is to revert some code changes in the read path of https://github.com/apache/spark/pull/14377. The original fix is https://github.com/apache/spark/pull/17830

When merging this PR, please give the credit to gaborfeher

## How was this patch tested?

Added a test case to OracleIntegrationSuite.scala

Author: Gabor Feher <gabor.feher@lynxanalytics.com>
Author: gatorsmile <gatorsmile@gmail.com>

Closes #18408 from gatorsmile/OracleType.
2017-06-23 21:53:38 -07:00
sureshthalamati 9ce714dca2 [SPARK-10655][SQL] Adding additional data type mappings to jdbc DB2dialect.
This patch adds DB2 specific data type mappings for decfloat, real, xml , and timestamp with time zone (DB2Z specific type)  types on read and for byte, short data types  on write to the to jdbc data source DB2 dialect. Default mapping does not work for these types when reading/writing from DB2 database.

Added docker test, and a JDBC unit test case.

Author: sureshthalamati <suresh.thalamati@gmail.com>

Closes #9162 from sureshthalamati/db2dialect_enhancements-spark-10655.
2017-06-20 22:35:42 -07:00
Mark Grover 55b8cfe6e6 [SPARK-19185][DSTREAM] Make Kafka consumer cache configurable
## What changes were proposed in this pull request?

Add a new property `spark.streaming.kafka.consumer.cache.enabled` that allows users to enable or disable the cache for Kafka consumers. This property can be especially handy in cases where issues like SPARK-19185 get hit, for which there isn't a solution committed yet. By default, the cache is still on, so this change doesn't change any out-of-box behavior.

## How was this patch tested?
Running unit tests

Author: Mark Grover <mark@apache.org>
Author: Mark Grover <grover.markgrover@gmail.com>

Closes #18234 from markgrover/spark-19185.
2017-06-08 09:55:43 -07:00
Wenchen Fan 10e526e7e6 [SPARK-20213][SQL] Fix DataFrameWriter operations in SQL UI tab
## What changes were proposed in this pull request?

Currently the `DataFrameWriter` operations have several problems:

1. non-file-format data source writing action doesn't show up in the SQL tab in Spark UI
2. file-format data source writing action shows a scan node in the SQL tab, without saying anything about writing. (streaming also have this issue, but not fixed in this PR)
3. Spark SQL CLI actions don't show up in the SQL tab.

This PR fixes all of them, by refactoring the `ExecuteCommandExec` to make it have children.

 close https://github.com/apache/spark/pull/17540

## How was this patch tested?

existing tests.

Also test the UI manually. For a simple command: `Seq(1 -> "a").toDF("i", "j").write.parquet("/tmp/qwe")`

before this PR:
<img width="266" alt="qq20170523-035840 2x" src="https://cloud.githubusercontent.com/assets/3182036/26326050/24e18ba2-3f6c-11e7-8817-6dd275bf6ac5.png">
after this PR:
<img width="287" alt="qq20170523-035708 2x" src="https://cloud.githubusercontent.com/assets/3182036/26326054/2ad7f460-3f6c-11e7-8053-d68325beb28f.png">

Author: Wenchen Fan <wenchen@databricks.com>

Closes #18064 from cloud-fan/execution.
2017-05-30 20:12:32 -07:00
Prashant Sharma 96a4d1d082 [SPARK-19968][SS] Use a cached instance of KafkaProducer instead of creating one every batch.
## What changes were proposed in this pull request?

In summary, cost of recreating a KafkaProducer for writing every batch is high as it starts a lot threads and make connections and then closes them. A KafkaProducer instance is promised to be thread safe in Kafka docs. Reuse of KafkaProducer instance while writing via multiple threads is encouraged.

Furthermore, I have performance improvement of 10x in latency, with this patch.

### These are times that addBatch took in ms. Without applying this patch
![with-out_patch](https://cloud.githubusercontent.com/assets/992952/23994612/a9de4a42-0a6b-11e7-9d5b-7ae18775bee4.png)
### These are times that addBatch took in ms. After applying this patch
![with_patch](https://cloud.githubusercontent.com/assets/992952/23994616/ad8c11ec-0a6b-11e7-8634-2266ebb5033f.png)

## How was this patch tested?
Running distributed benchmarks comparing runs with this patch and without it.
Added relevant unit tests.

Author: Prashant Sharma <prashsh1@in.ibm.com>

Closes #17308 from ScrapCodes/cached-kafka-producer.
2017-05-29 18:12:01 -07:00
liuzhaokun dba2ca2c12 [SPARK-20759] SCALA_VERSION in _config.yml should be consistent with pom.xml
[https://issues.apache.org/jira/browse/SPARK-20759](https://issues.apache.org/jira/browse/SPARK-20759)
SCALA_VERSION in _config.yml is 2.11.7, but 2.11.8 in pom.xml. So I think SCALA_VERSION in _config.yml should be consistent with pom.xml.

Author: liuzhaokun <liu.zhaokun@zte.com.cn>

Closes #17992 from liu-zhaokun/new.
2017-05-19 15:26:39 +01:00
Shixiong Zhu 324a904d8e [SPARK-13747][CORE] Add ThreadUtils.awaitReady and disallow Await.ready
## What changes were proposed in this pull request?

Add `ThreadUtils.awaitReady` similar to `ThreadUtils.awaitResult` and disallow `Await.ready`.

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #17763 from zsxwing/awaitready.
2017-05-17 17:21:46 -07:00
Yash Sharma 38f4e8692c [SPARK-20140][DSTREAM] Remove hardcoded kinesis retry wait and max retries
## What changes were proposed in this pull request?

The pull requests proposes to remove the hardcoded values for Amazon Kinesis - MIN_RETRY_WAIT_TIME_MS, MAX_RETRIES.

This change is critical for kinesis checkpoint recovery when the kinesis backed rdd is huge.
Following happens in a typical kinesis recovery :
- kinesis throttles large number of requests while recovering
- retries in case of throttling are not able to recover due to the small wait period
- kinesis throttles per second, the wait period should be configurable for recovery

The patch picks the spark kinesis configs from:
- spark.streaming.kinesis.retry.wait.time
- spark.streaming.kinesis.retry.max.attempts

Jira : https://issues.apache.org/jira/browse/SPARK-20140

## How was this patch tested?

Modified the KinesisBackedBlockRDDSuite.scala to run kinesis tests with the modified configurations. Wasn't able to test the patch with actual throttling.

Author: Yash Sharma <ysharma@atlassian.com>

Closes #17467 from yssharma/ysharma/spark-kinesis-retries.
2017-05-16 15:08:05 -07:00
Jacek Laskowski 7144b51809 [SPARK-20600][SS] KafkaRelation should be pretty printed in web UI
## What changes were proposed in this pull request?

User-friendly name of `KafkaRelation` in web UI (under Details for Query).

### Before

<img width="516" alt="spark-20600-before" src="https://cloud.githubusercontent.com/assets/62313/25841955/74479ac6-34a2-11e7-87fb-d9f62a1356a7.png">

### After

<img width="439" alt="spark-20600-after" src="https://cloud.githubusercontent.com/assets/62313/25841829/f5335630-34a1-11e7-85a4-afe9b66d73c8.png">

## How was this patch tested?

Local build

```
./bin/spark-shell --jars ~/.m2/repository/org/apache/spark/spark-sql-kafka-0-10_2.11/2.3.0-SNAPSHOT/spark-sql-kafka-0-10_2.11-2.3.0-SNAPSHOT.jar --packages org.apache.kafka:kafka-clients:0.10.0.1
```

Author: Jacek Laskowski <jacek@japila.pl>

Closes #17917 from jaceklaskowski/SPARK-20600-KafkaRelation-webUI.
2017-05-11 10:55:11 -07:00
Xianyang Liu fcb88f9211 [MINOR][BUILD] Fix lint-java breaks.
## What changes were proposed in this pull request?

This PR proposes to fix the lint-breaks as below:
```
[ERROR] src/main/java/org/apache/spark/unsafe/Platform.java:[51] (regexp) RegexpSingleline: No trailing whitespace allowed.
[ERROR] src/main/scala/org/apache/spark/sql/streaming/Trigger.java:[45,25] (naming) MethodName: Method name 'ProcessingTime' must match pattern '^[a-z][a-z0-9][a-zA-Z0-9_]*$'.
[ERROR] src/main/scala/org/apache/spark/sql/streaming/Trigger.java:[62,25] (naming) MethodName: Method name 'ProcessingTime' must match pattern '^[a-z][a-z0-9][a-zA-Z0-9_]*$'.
[ERROR] src/main/scala/org/apache/spark/sql/streaming/Trigger.java:[78,25] (naming) MethodName: Method name 'ProcessingTime' must match pattern '^[a-z][a-z0-9][a-zA-Z0-9_]*$'.
[ERROR] src/main/scala/org/apache/spark/sql/streaming/Trigger.java:[92,25] (naming) MethodName: Method name 'ProcessingTime' must match pattern '^[a-z][a-z0-9][a-zA-Z0-9_]*$'.
[ERROR] src/main/scala/org/apache/spark/sql/streaming/Trigger.java:[102,25] (naming) MethodName: Method name 'Once' must match pattern '^[a-z][a-z0-9][a-zA-Z0-9_]*$'.
[ERROR] src/test/java/org/apache/spark/streaming/kinesis/JavaKinesisInputDStreamBuilderSuite.java:[28,8] (imports) UnusedImports: Unused import - org.apache.spark.streaming.api.java.JavaDStream.
```

after:
```
dev/lint-java
Checkstyle checks passed.
```
[Test Result](https://travis-ci.org/ConeyLiu/spark/jobs/229666169)

## How was this patch tested?

Travis CI

Author: Xianyang Liu <xianyang.liu@intel.com>

Closes #17890 from ConeyLiu/codestyle.
2017-05-10 13:56:34 +01:00
Xiao Li cafca54c0e [SPARK-20557][SQL] Support JDBC data type Time with Time Zone
### What changes were proposed in this pull request?

This PR is to support JDBC data type TIME WITH TIME ZONE. It can be converted to TIMESTAMP

In addition, before this PR, for unsupported data types, we simply output the type number instead of the type name.

```
java.sql.SQLException: Unsupported type 2014
```
After this PR, the message is like
```
java.sql.SQLException: Unsupported type TIMESTAMP_WITH_TIMEZONE
```

- Also upgrade the H2 version to `1.4.195` which has the type fix for "TIMESTAMP WITH TIMEZONE". However, it is not fully supported. Thus, we capture the exception, but we still need it to partially test the support of "TIMESTAMP WITH TIMEZONE", because Docker tests are not regularly run.

### How was this patch tested?
Added test cases.

Author: Xiao Li <gatorsmile@gmail.com>

Closes #17835 from gatorsmile/h2.
2017-05-06 22:21:19 -07:00
Jannik Arndt b31648c081 [SPARK-20557][SQL] Support for db column type TIMESTAMP WITH TIME ZONE
## What changes were proposed in this pull request?

SparkSQL can now read from a database table with column type [TIMESTAMP WITH TIME ZONE](https://docs.oracle.com/javase/8/docs/api/java/sql/Types.html#TIMESTAMP_WITH_TIMEZONE).

## How was this patch tested?

Tested against Oracle database.

JoshRosen, you seem to know the class, would you look at this? Thanks!

Author: Jannik Arndt <jannik@jannikarndt.de>

Closes #17832 from JannikArndt/spark-20557-timestamp-with-timezone.
2017-05-05 11:42:55 -07:00
Shixiong Zhu bd57882879 [SPARK-20603][SS][TEST] Set default number of topic partitions to 1 to reduce the load
## What changes were proposed in this pull request?

I checked the logs of https://amplab.cs.berkeley.edu/jenkins/job/spark-branch-2.2-test-maven-hadoop-2.7/47/ and found it took several seconds to create Kafka internal topic `__consumer_offsets`. As Kafka creates this topic lazily, the topic creation happens in the first test `deserialization of initial offset with Spark 2.1.0` and causes it timeout.

This PR changes `offsets.topic.num.partitions` from the default value 50 to 1 to make creating `__consumer_offsets` (50 partitions -> 1 partition) much faster.

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #17863 from zsxwing/fix-kafka-flaky-test.
2017-05-05 11:08:26 -07:00
Bill Chambers 733b81b835 [SPARK-20496][SS] Bug in KafkaWriter Looks at Unanalyzed Plans
## What changes were proposed in this pull request?

We didn't enforce analyzed plans in Spark 2.1 when writing out to Kafka.

## How was this patch tested?

New unit test.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Bill Chambers <bill@databricks.com>

Closes #17804 from anabranch/SPARK-20496-2.
2017-04-28 10:18:31 -07:00
Shixiong Zhu 823baca2cb [SPARK-20452][SS][KAFKA] Fix a potential ConcurrentModificationException for batch Kafka DataFrame
## What changes were proposed in this pull request?

Cancel a batch Kafka query but one of task cannot be cancelled, and rerun the same DataFrame may cause ConcurrentModificationException because it may launch two tasks sharing the same group id.

This PR always create a new consumer when `reuseKafkaConsumer = false` to avoid ConcurrentModificationException. It also contains other minor fixes.

## How was this patch tested?

Jenkins.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #17752 from zsxwing/kafka-fix.
2017-04-27 13:58:44 -07:00
Shixiong Zhu 01c999e7f9 [SPARK-20461][CORE][SS] Use UninterruptibleThread for Executor and fix the potential hang in CachedKafkaConsumer
## What changes were proposed in this pull request?

This PR changes Executor's threads to `UninterruptibleThread` so that we can use `runUninterruptibly` in `CachedKafkaConsumer`. However, this is just best effort to avoid hanging forever. If the user uses`CachedKafkaConsumer` in another thread (e.g., create a new thread or Future), the potential hang may still happen.

## How was this patch tested?

The new added test.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #17761 from zsxwing/int.
2017-04-27 13:55:03 -07:00
Josh Rosen f44c8a843c [SPARK-20453] Bump master branch version to 2.3.0-SNAPSHOT
This patch bumps the master branch version to `2.3.0-SNAPSHOT`.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #17753 from JoshRosen/SPARK-20453.
2017-04-24 21:48:04 -07:00
Yash Sharma ec68d8f8cf [SPARK-20189][DSTREAM] Fix spark kinesis testcases to remove deprecated createStream and use Builders
## What changes were proposed in this pull request?

The spark-kinesis testcases use the KinesisUtils.createStream which are deprecated now. Modify the testcases to use the recommended KinesisInputDStream.builder instead.
This change will also enable the testcases to automatically use the session tokens automatically.

## How was this patch tested?

All the existing testcases work fine as expected with the changes.

https://issues.apache.org/jira/browse/SPARK-20189

Author: Yash Sharma <ysharma@atlassian.com>

Closes #17506 from yssharma/ysharma/cleanup_kinesis_testcases.
2017-04-13 08:49:19 +01:00
Sean Owen a26e3ed5e4 [SPARK-20156][CORE][SQL][STREAMING][MLLIB] Java String toLowerCase "Turkish locale bug" causes Spark problems
## What changes were proposed in this pull request?

Add Locale.ROOT to internal calls to String `toLowerCase`, `toUpperCase`, to avoid inadvertent locale-sensitive variation in behavior (aka the "Turkish locale problem").

The change looks large but it is just adding `Locale.ROOT` (the locale with no country or language specified) to every call to these methods.

## How was this patch tested?

Existing tests.

Author: Sean Owen <sowen@cloudera.com>

Closes #17527 from srowen/SPARK-20156.
2017-04-10 20:11:56 +01:00
Tathagata Das dad499f324 [SPARK-20209][SS] Execute next trigger immediately if previous batch took longer than trigger interval
## What changes were proposed in this pull request?

For large trigger intervals (e.g. 10 minutes), if a batch takes 11 minutes, then it will wait for 9 mins before starting the next batch. This does not make sense. The processing time based trigger policy should be to do process batches as fast as possible, but no faster than 1 in every trigger interval. If batches are taking longer than trigger interval anyways, then no point waiting extra trigger interval.

In this PR, I modified the ProcessingTimeExecutor to do so. Another minor change I did was to extract our StreamManualClock into a separate class so that it can be used outside subclasses of StreamTest. For example, ProcessingTimeExecutorSuite does not need to create any context for testing, just needs the StreamManualClock.

## How was this patch tested?
Added new unit tests to comprehensively test this behavior.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #17525 from tdas/SPARK-20209.
2017-04-04 23:20:17 -07:00
Adam Budde 707e501832 [SPARK-19911][STREAMING] Add builder interface for Kinesis DStreams
## What changes were proposed in this pull request?

- Add new KinesisDStream.scala containing KinesisDStream.Builder class
- Add KinesisDStreamBuilderSuite test suite
- Make KinesisInputDStream ctor args package private for testing
- Add JavaKinesisDStreamBuilderSuite test suite
- Add args to KinesisInputDStream and KinesisReceiver for optional
  service-specific auth (Kinesis, DynamoDB and CloudWatch)
## How was this patch tested?

Added ```KinesisDStreamBuilderSuite``` to verify builder class works as expected

Author: Adam Budde <budde@amazon.com>

Closes #17250 from budde/KinesisStreamBuilder.
2017-03-24 12:40:29 -07:00
Tyson Condie 746a558de2 [SPARK-19876][SS][WIP] OneTime Trigger Executor
## What changes were proposed in this pull request?

An additional trigger and trigger executor that will execute a single trigger only. One can use this OneTime trigger to have more control over the scheduling of triggers.

In addition, this patch requires an optimization to StreamExecution that logs a commit record at the end of successfully processing a batch. This new commit log will be used to determine the next batch (offsets) to process after a restart, instead of using the offset log itself to determine what batch to process next after restart; using the offset log to determine this would process the previously logged batch, always, thus not permitting a OneTime trigger feature.

## How was this patch tested?

A number of existing tests have been revised. These tests all assumed that when restarting a stream, the last batch in the offset log is to be re-processed. Given that we now have a commit log that will tell us if that last batch was processed successfully, the results/assumptions of those tests needed to be revised accordingly.

In addition, a OneTime trigger test was added to StreamingQuerySuite, which tests:
- The semantics of OneTime trigger (i.e., on start, execute a single batch, then stop).
- The case when the commit log was not able to successfully log the completion of a batch before restart, which would mean that we should fall back to what's in the offset log.
- A OneTime trigger execution that results in an exception being thrown.

marmbrus tdas zsxwing

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Tyson Condie <tcondie@gmail.com>
Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #17219 from tcondie/stream-commit.
2017-03-23 14:32:05 -07:00
Liwei Lin 2ea214dd05 [SPARK-19721][SS] Good error message for version mismatch in log files
## Problem

There are several places where we write out version identifiers in various logs for structured streaming (usually `v1`). However, in the places where we check for this, we throw a confusing error message.

## What changes were proposed in this pull request?

This patch made two major changes:
1. added a `parseVersion(...)` method, and based on this method, fixed the following places the way they did version checking (no other place needed to do this checking):
```
HDFSMetadataLog
  - CompactibleFileStreamLog  ------------> fixed with this patch
    - FileStreamSourceLog  ---------------> inherited the fix of `CompactibleFileStreamLog`
    - FileStreamSinkLog  -----------------> inherited the fix of `CompactibleFileStreamLog`
  - OffsetSeqLog  ------------------------> fixed with this patch
  - anonymous subclass in KafkaSource  ---> fixed with this patch
```

2. changed the type of `FileStreamSinkLog.VERSION`, `FileStreamSourceLog.VERSION` etc. from `String` to `Int`, so that we can identify newer versions via `version > 1` instead of `version != "v1"`
    - note this didn't break any backwards compatibility -- we are still writing out `"v1"` and reading back `"v1"`

## Exception message with this patch
```
java.lang.IllegalStateException: Failed to read log file /private/var/folders/nn/82rmvkk568sd8p3p8tb33trw0000gn/T/spark-86867b65-0069-4ef1-b0eb-d8bd258ff5b8/0. UnsupportedLogVersion: maximum supported log version is v1, but encountered v99. The log file was produced by a newer version of Spark and cannot be read by this version. Please upgrade.
	at org.apache.spark.sql.execution.streaming.HDFSMetadataLog.get(HDFSMetadataLog.scala:202)
	at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3$$anonfun$apply$mcV$sp$2.apply(OffsetSeqLogSuite.scala:78)
	at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3$$anonfun$apply$mcV$sp$2.apply(OffsetSeqLogSuite.scala:75)
	at org.apache.spark.sql.test.SQLTestUtils$class.withTempDir(SQLTestUtils.scala:133)
	at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite.withTempDir(OffsetSeqLogSuite.scala:26)
	at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3.apply$mcV$sp(OffsetSeqLogSuite.scala:75)
	at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3.apply(OffsetSeqLogSuite.scala:75)
	at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3.apply(OffsetSeqLogSuite.scala:75)
	at org.scalatest.Transformer$$anonfun$apply$1.apply$mcV$sp(Transformer.scala:22)
	at org.scalatest.OutcomeOf$class.outcomeOf(OutcomeOf.scala:85)
```

## How was this patch tested?

unit tests

Author: Liwei Lin <lwlin7@gmail.com>

Closes #17070 from lw-lin/better-msg.
2017-03-16 13:05:36 -07:00
uncleGen 0a4d06a7c3 [SPARK-19853][SS] uppercase kafka topics fail when startingOffsets are SpecificOffsets
When using the KafkaSource with Structured Streaming, consumer assignments are not what the user expects if startingOffsets is set to an explicit set of topics/partitions in JSON where the topic(s) happen to have uppercase characters. When StartingOffsets is constructed, the original string value from options is transformed toLowerCase to make matching on "earliest" and "latest" case insensitive. However, the toLowerCase JSON is passed to SpecificOffsets for the terminal condition, so topic names may not be what the user intended by the time assignments are made with the underlying KafkaConsumer.

KafkaSourceProvider.scala:
```
val startingOffsets = caseInsensitiveParams.get(STARTING_OFFSETS_OPTION_KEY).map(_.trim.toLowerCase) match {
    case Some("latest") => LatestOffsets
    case Some("earliest") => EarliestOffsets
    case Some(json) => SpecificOffsets(JsonUtils.partitionOffsets(json))
    case None => LatestOffsets
  }
```

Thank cbowden for reporting.

Jenkins

Author: uncleGen <hustyugm@gmail.com>

Closes #17209 from uncleGen/SPARK-19853.
2017-03-12 17:52:20 -07:00
Burak Yavuz 82138e09b9 [SPARK-19886] Fix reportDataLoss if statement in SS KafkaSource
## What changes were proposed in this pull request?

Fix the `throw new IllegalStateException` if statement part.

## How is this patch tested

Regression test

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #17228 from brkyvz/kafka-cause-fix.
2017-03-09 17:42:10 -08:00
Tyson Condie b0a5cd8909 [SPARK-19719][SS] Kafka writer for both structured streaming and batch queires
## What changes were proposed in this pull request?

Add a new Kafka Sink and Kafka Relation for writing streaming and batch queries, respectively, to Apache Kafka.
### Streaming Kafka Sink
- When addBatch is called
-- If batchId is great than the last written batch
--- Write batch to Kafka
---- Topic will be taken from the record, if present, or from a topic option, which overrides topic in record.
-- Else ignore

### Batch Kafka Sink
- KafkaSourceProvider will implement CreatableRelationProvider
- CreatableRelationProvider#createRelation will write the passed in Dataframe to a Kafka
- Topic will be taken from the record, if present, or from topic option, which overrides topic in record.
- Save modes Append and ErrorIfExist supported under identical semantics. Other save modes result in an AnalysisException

tdas zsxwing

## How was this patch tested?

### The following unit tests will be included
- write to stream with topic field: valid stream write with data that includes an existing topic in the schema
- write structured streaming aggregation w/o topic field, with default topic: valid stream write with data that does not include a topic field, but the configuration includes a default topic
- write data with bad schema: various cases of writing data that does not conform to a proper schema e.g., 1. no topic field or default topic, and 2. no value field
- write data with valid schema but wrong types: data with a complete schema but wrong types e.g., key and value types are integers.
- write to non-existing topic: write a stream to a topic that does not exist in Kafka, which has been configured to not auto-create topics.
- write batch to kafka: simple write batch to Kafka, which goes through the same code path as streaming scenario, so validity checks will not be redone here.

### Examples
```scala
// Structured Streaming
val writer = inputStringStream.map(s => s.get(0).toString.getBytes()).toDF("value")
 .selectExpr("value as key", "value as value")
 .writeStream
 .format("kafka")
 .option("checkpointLocation", checkpointDir)
 .outputMode(OutputMode.Append)
 .option("kafka.bootstrap.servers", brokerAddress)
 .option("topic", topic)
 .queryName("kafkaStream")
 .start()

// Batch
val df = spark
 .sparkContext
 .parallelize(Seq("1", "2", "3", "4", "5"))
 .map(v => (topic, v))
 .toDF("topic", "value")

df.write
 .format("kafka")
 .option("kafka.bootstrap.servers",brokerAddress)
 .option("topic", topic)
 .save()
```
Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Tyson Condie <tcondie@gmail.com>

Closes #17043 from tcondie/kafka-writer.
2017-03-06 16:39:05 -08:00
Gaurav 46a64d1e0a [SPARK-19304][STREAMING][KINESIS] fix kinesis slow checkpoint recovery
## What changes were proposed in this pull request?
added a limit to getRecords api call call in KinesisBackedBlockRdd. This helps reduce the amount of data returned by kinesis api call making the recovery considerably faster

As we are storing the `fromSeqNum` & `toSeqNum` in checkpoint metadata, we can also store the number of records. Which can later be used for api call.

## How was this patch tested?
The patch was manually tested

Apologies for any silly mistakes, opening first pull request

Author: Gaurav <gaurav@techtinium.com>

Closes #16842 from Gauravshah/kinesis_checkpoint_recovery_fix_2_1_0.
2017-03-06 10:41:49 -08:00
hyukjinkwon 4ba9c6c453 [MINOR][BUILD] Fix lint-java breaks in Java
## What changes were proposed in this pull request?

This PR proposes to fix the lint-breaks as below:

```
[ERROR] src/test/java/org/apache/spark/network/TransportResponseHandlerSuite.java:[29,8] (imports) UnusedImports: Unused import - org.apache.spark.network.buffer.ManagedBuffer.
[ERROR] src/main/java/org/apache/spark/unsafe/types/UTF8String.java:[156,10] (modifier) ModifierOrder: 'Nonnull' annotation modifier does not precede non-annotation modifiers.
[ERROR] src/main/java/org/apache/spark/SparkFirehoseListener.java:[122] (sizes) LineLength: Line is longer than 100 characters (found 105).
[ERROR] src/main/java/org/apache/spark/util/collection/unsafe/sort/UnsafeExternalSorter.java:[164,78] (coding) OneStatementPerLine: Only one statement per line allowed.
[ERROR] src/test/java/test/org/apache/spark/JavaAPISuite.java:[1157] (sizes) LineLength: Line is longer than 100 characters (found 121).
[ERROR] src/test/java/org/apache/spark/streaming/JavaMapWithStateSuite.java:[149] (sizes) LineLength: Line is longer than 100 characters (found 113).
[ERROR] src/test/java/test/org/apache/spark/streaming/Java8APISuite.java:[146] (sizes) LineLength: Line is longer than 100 characters (found 122).
[ERROR] src/test/java/test/org/apache/spark/streaming/JavaAPISuite.java:[32,8] (imports) UnusedImports: Unused import - org.apache.spark.streaming.Time.
[ERROR] src/test/java/test/org/apache/spark/streaming/JavaAPISuite.java:[611] (sizes) LineLength: Line is longer than 100 characters (found 101).
[ERROR] src/test/java/test/org/apache/spark/streaming/JavaAPISuite.java:[1317] (sizes) LineLength: Line is longer than 100 characters (found 102).
[ERROR] src/test/java/test/org/apache/spark/sql/JavaDatasetAggregatorSuite.java:[91] (sizes) LineLength: Line is longer than 100 characters (found 102).
[ERROR] src/test/java/test/org/apache/spark/sql/JavaDatasetSuite.java:[113] (sizes) LineLength: Line is longer than 100 characters (found 101).
[ERROR] src/test/java/test/org/apache/spark/sql/JavaDatasetSuite.java:[164] (sizes) LineLength: Line is longer than 100 characters (found 110).
[ERROR] src/test/java/test/org/apache/spark/sql/JavaDatasetSuite.java:[212] (sizes) LineLength: Line is longer than 100 characters (found 114).
[ERROR] src/test/java/org/apache/spark/mllib/tree/JavaDecisionTreeSuite.java:[36] (sizes) LineLength: Line is longer than 100 characters (found 101).
[ERROR] src/main/java/org/apache/spark/examples/streaming/JavaKinesisWordCountASL.java:[26,8] (imports) UnusedImports: Unused import - com.amazonaws.regions.RegionUtils.
[ERROR] src/test/java/org/apache/spark/streaming/kinesis/JavaKinesisStreamSuite.java:[20,8] (imports) UnusedImports: Unused import - com.amazonaws.regions.RegionUtils.
[ERROR] src/test/java/org/apache/spark/streaming/kinesis/JavaKinesisStreamSuite.java:[94] (sizes) LineLength: Line is longer than 100 characters (found 103).
[ERROR] src/main/java/org/apache/spark/examples/ml/JavaTokenizerExample.java:[30,8] (imports) UnusedImports: Unused import - org.apache.spark.sql.api.java.UDF1.
[ERROR] src/main/java/org/apache/spark/examples/ml/JavaTokenizerExample.java:[72] (sizes) LineLength: Line is longer than 100 characters (found 104).
[ERROR] src/main/java/org/apache/spark/examples/mllib/JavaRankingMetricsExample.java:[121] (sizes) LineLength: Line is longer than 100 characters (found 101).
[ERROR] src/main/java/org/apache/spark/examples/sql/JavaSQLDataSourceExample.java:[28,8] (imports) UnusedImports: Unused import - org.apache.spark.api.java.JavaRDD.
[ERROR] src/main/java/org/apache/spark/examples/sql/JavaSQLDataSourceExample.java:[29,8] (imports) UnusedImports: Unused import - org.apache.spark.api.java.JavaSparkContext.
```

## How was this patch tested?

Manually via

```bash
./dev/lint-java
```

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #17072 from HyukjinKwon/java-lint.
2017-02-27 08:44:26 +00:00
Adam Budde e4065376d2 [SPARK-19405][STREAMING] Support for cross-account Kinesis reads via STS
- Add dependency on aws-java-sdk-sts
- Replace SerializableAWSCredentials with new SerializableCredentialsProvider interface
- Make KinesisReceiver take SerializableCredentialsProvider as argument and
  pass credential provider to KCL
- Add new implementations of KinesisUtils.createStream() that take STS
  arguments
- Make JavaKinesisStreamSuite test the entire KinesisUtils Java API
- Update KCL/AWS SDK dependencies to 1.7.x/1.11.x

## What changes were proposed in this pull request?

[JIRA link with detailed description.](https://issues.apache.org/jira/browse/SPARK-19405)

* Replace SerializableAWSCredentials with new SerializableKCLAuthProvider class that takes 5 optional config params for configuring AWS auth and returns the appropriate credential provider object
* Add new public createStream() APIs for specifying these parameters in KinesisUtils

## How was this patch tested?

* Manually tested using explicit keypair and instance profile to read data from Kinesis stream in separate account (difficult to write a test orchestrating creation and assumption of IAM roles across separate accounts)
* Expanded JavaKinesisStreamSuite to test the entire Java API in KinesisUtils

## License acknowledgement
This contribution is my original work and that I license the work to the project under the project’s open source license.

Author: Budde <budde@amazon.com>

Closes #16744 from budde/master.
2017-02-22 11:32:36 -05:00
hyukjinkwon 17b93b5feb
[SPARK-18922][TESTS] Fix new test failures on Windows due to path and resource not closed
## What changes were proposed in this pull request?

This PR proposes to fix new test failures on WIndows as below:

**Before**

```
KafkaRelationSuite:
 - test late binding start offsets *** FAILED *** (7 seconds, 679 milliseconds)
   Cause: java.nio.file.FileSystemException: C:\projects\spark\target\tmp\spark-4c4b0cd1-4cb7-4908-949d-1b0cc8addb50\topic-4-0\00000000000000000000.log -> C:\projects\spark\target\tmp\spark-4c4b0cd1-4cb7-4908-949d-1b0cc8addb50\topic-4-0\00000000000000000000.log.deleted: The process cannot access the file because it is being used by another process.

KafkaSourceSuite:
 - deserialization of initial offset with Spark 2.1.0 *** FAILED *** (3 seconds, 542 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-97ef64fc-ae61-4ce3-ac59-287fd38bd824

 - deserialization of initial offset written by Spark 2.1.0 *** FAILED *** (60 milliseconds)
   java.nio.file.InvalidPathException: Illegal char <:> at index 2: /C:/projects/spark/external/kafka-0-10-sql/target/scala-2.11/test-classes/kafka-source-initial-offset-version-2.1.0.b

HiveDDLSuite:
 - partitioned table should always put partition columns at the end of table schema *** FAILED *** (657 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-f1b83d09-850a-4bba-8e43-a2a28dfaa757;

DDLSuite:
 - create a data source table without schema *** FAILED *** (94 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-a3f3c161-afae-4d6f-9182-e8642f77062b;

 - SET LOCATION for managed table *** FAILED *** (219 milliseconds)
   org.apache.spark.sql.catalyst.errors.package$TreeNodeException: execute, tree:
 Exchange SinglePartit
 +- *HashAggregate(keys=[], functions=[partial_count(1)], output=[count#99367L])
    +- *FileScan parquet default.tbl[] Batched: true, Format: Parquet, Location: InMemoryFileIndex[file:/C:projectsspark	arget	mpspark-15be2f2f-4ea9-4c47-bfee-1b7b49363033], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<>

 - insert data to a data source table which has a not existed location should succeed *** FAILED *** (16 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-34987671-e8d1-4624-ba5b-db1012e1246b;

 - insert into a data source table with no existed partition location should succeed *** FAILED *** (16 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-4c6ccfbf-4091-4032-9fbc-3d40c58267d5;

 - read data from a data source table which has a not existed location should succeed *** FAILED *** (0 milliseconds)

 - read data from a data source table with no existed partition location should succeed *** FAILED *** (0 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-6af39e37-abd1-44e8-ac68-e2dfcf67a2f3;

InputOutputMetricsSuite:
 - output metrics on records written *** FAILED *** (0 milliseconds)
   java.lang.IllegalArgumentException: Wrong FS: file://C:\projects\spark\target\tmp\spark-cd69ee77-88f2-4202-bed6-19c0ee05ef55\InputOutputMetricsSuite, expected: file:///

 - output metrics on records written - new Hadoop API *** FAILED *** (16 milliseconds)
   java.lang.IllegalArgumentException: Wrong FS: file://C:\projects\spark\target\tmp\spark-b69e8fcb-047b-4de8-9cdf-5f026efb6762\InputOutputMetricsSuite, expected: file:///
```

**After**

```
KafkaRelationSuite:
 - test late binding start offsets !!! CANCELED !!! (62 milliseconds)

KafkaSourceSuite:
 - deserialization of initial offset with Spark 2.1.0 (5 seconds, 341 milliseconds)
 - deserialization of initial offset written by Spark 2.1.0 (910 milliseconds)

HiveDDLSuite:
 - partitioned table should always put partition columns at the end of table schema (2 seconds)

DDLSuite:
 - create a data source table without schema (828 milliseconds)
 - SET LOCATION for managed table (406 milliseconds)
 - insert data to a data source table which has a not existed location should succeed (406 milliseconds)
 - insert into a data source table with no existed partition location should succeed (453 milliseconds)
 - read data from a data source table which has a not existed location should succeed (94 milliseconds)
 - read data from a data source table with no existed partition location should succeed (265 milliseconds)

InputOutputMetricsSuite:
 - output metrics on records written (172 milliseconds)
 - output metrics on records written - new Hadoop API (297 milliseconds)
```

## How was this patch tested?

Fixed tests in `InputOutputMetricsSuite`, `KafkaRelationSuite`,  `KafkaSourceSuite`, `DDLSuite.scala` and `HiveDDLSuite`.

Manually tested via AppVeyor as below:

`InputOutputMetricsSuite`: https://ci.appveyor.com/project/spark-test/spark/build/633-20170219-windows-test/job/ex8nvwa6tsh7rmto
`KafkaRelationSuite`: https://ci.appveyor.com/project/spark-test/spark/build/633-20170219-windows-test/job/h8dlcowew52y8ncw
`KafkaSourceSuite`: https://ci.appveyor.com/project/spark-test/spark/build/634-20170219-windows-test/job/9ybgjl7yeubxcre4
`DDLSuite`: https://ci.appveyor.com/project/spark-test/spark/build/635-20170219-windows-test
`HiveDDLSuite`: https://ci.appveyor.com/project/spark-test/spark/build/633-20170219-windows-test/job/up6o9n47er087ltb

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16999 from HyukjinKwon/windows-fix.
2017-02-20 21:26:54 -08:00
Sean Owen 1487c9af20
[SPARK-19534][TESTS] Convert Java tests to use lambdas, Java 8 features
## What changes were proposed in this pull request?

Convert tests to use Java 8 lambdas, and modest related fixes to surrounding code.

## How was this patch tested?

Jenkins tests

Author: Sean Owen <sowen@cloudera.com>

Closes #16964 from srowen/SPARK-19534.
2017-02-19 09:42:50 -08:00
Shixiong Zhu 15b144d2bf [SPARK-19617][SS] Fix the race condition when starting and stopping a query quickly
## What changes were proposed in this pull request?

The streaming thread in StreamExecution uses the following ways to check if it should exit:
- Catch an InterruptException.
- `StreamExecution.state` is TERMINATED.

When starting and stopping a query quickly, the above two checks may both fail:
- Hit [HADOOP-14084](https://issues.apache.org/jira/browse/HADOOP-14084) and swallow InterruptException
- StreamExecution.stop is called before `state` becomes `ACTIVE`. Then [runBatches](dcc2d540a5/sql/core/src/main/scala/org/apache/spark/sql/execution/streaming/StreamExecution.scala (L252)) changes the state from `TERMINATED` to `ACTIVE`.

If the above cases both happen, the query will hang forever.

This PR changes `state` to `AtomicReference` and uses`compareAndSet` to make sure we only change the state from `INITIALIZING` to `ACTIVE`. It also removes the `runUninterruptibly` hack from ``HDFSMetadata`, because HADOOP-14084 won't cause any problem after we fix the race condition.

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16947 from zsxwing/SPARK-19617.
2017-02-17 19:04:45 -08:00
Roberto Agostino Vitillo 1a3f5f8c55 [SPARK-19517][SS] KafkaSource fails to initialize partition offsets
## What changes were proposed in this pull request?

This patch fixes a bug in `KafkaSource` with the (de)serialization of the length of the JSON string that contains the initial partition offsets.

## How was this patch tested?

I ran the test suite for spark-sql-kafka-0-10.

Author: Roberto Agostino Vitillo <ra.vitillo@gmail.com>

Closes #16857 from vitillo/kafka_source_fix.
2017-02-17 11:44:18 -08:00
Sean Owen 0e2405490f
[SPARK-19550][BUILD][CORE][WIP] Remove Java 7 support
- Move external/java8-tests tests into core, streaming, sql and remove
- Remove MaxPermGen and related options
- Fix some reflection / TODOs around Java 8+ methods
- Update doc references to 1.7/1.8 differences
- Remove Java 7/8 related build profiles
- Update some plugins for better Java 8 compatibility
- Fix a few Java-related warnings

For the future:

- Update Java 8 examples to fully use Java 8
- Update Java tests to use lambdas for simplicity
- Update Java internal implementations to use lambdas

## How was this patch tested?

Existing tests

Author: Sean Owen <sowen@cloudera.com>

Closes #16871 from srowen/SPARK-19493.
2017-02-16 12:32:45 +00:00
sureshthalamati f48c5a57d6 [SPARK-19318][SQL] Fix to treat JDBC connection properties specified by the user in case-sensitive manner.
## What changes were proposed in this pull request?
The reason for test failure is that the property “oracle.jdbc.mapDateToTimestamp” set by the test was getting converted into all lower case. Oracle database expects this property in case-sensitive manner.

This test was passing in previous releases because connection properties were sent as user specified for the test case scenario. Fixes to handle all option uniformly in case-insensitive manner, converted the JDBC connection properties also to lower case.

This PR  enhances CaseInsensitiveMap to keep track of input case-sensitive keys , and uses those when creating connection properties that are passed to the JDBC connection.

Alternative approach PR https://github.com/apache/spark/pull/16847  is to pass original input keys to JDBC data source by adding check in the  Data source class and handle case-insensitivity in the JDBC source code.

## How was this patch tested?
Added new test cases to JdbcSuite , and OracleIntegrationSuite. Ran docker integration tests passed on my laptop, all tests passed successfully.

Author: sureshthalamati <suresh.thalamati@gmail.com>

Closes #16891 from sureshthalamati/jdbc_case_senstivity_props_fix-SPARK-19318.
2017-02-14 15:34:12 -08:00
Liwei Lin 2bdbc87052 [SPARK-19564][SPARK-19559][SS][KAFKA] KafkaOffsetReader's consumers should not be in the same group
## What changes were proposed in this pull request?

In `KafkaOffsetReader`, when error occurs, we abort the existing consumer and create a new consumer. In our current implementation, the first consumer and the second consumer would be in the same group (which leads to SPARK-19559), **_violating our intention of the two consumers not being in the same group._**

The cause is that, in our current implementation, the first consumer is created before `groupId` and `nextId` are initialized in the constructor. Then even if `groupId` and `nextId` are increased during the creation of that first consumer, `groupId` and `nextId` would still be initialized to default values in the constructor for the second consumer.

We should make sure that `groupId` and `nextId` are initialized before any consumer is created.

## How was this patch tested?

Ran 100 times of `KafkaSourceSuite`; all passed

Author: Liwei Lin <lwlin7@gmail.com>

Closes #16902 from lw-lin/SPARK-19564-.
2017-02-12 23:00:22 -08:00
Tyson Condie 8df4444034 [SPARK-18682][SS] Batch Source for Kafka
## What changes were proposed in this pull request?

Today, you can start a stream that reads from kafka. However, given kafka's configurable retention period, it seems like sometimes you might just want to read all of the data that is available now. As such we should add a version that works with spark.read as well.
The options should be the same as the streaming kafka source, with the following differences:
startingOffsets should default to earliest, and should not allow latest (which would always be empty).
endingOffsets should also be allowed and should default to latest. the same assign json format as startingOffsets should also be accepted.
It would be really good, if things like .limit(n) were enough to prevent all the data from being read (this might just work).

## How was this patch tested?

KafkaRelationSuite was added for testing batch queries via KafkaUtils.

Author: Tyson Condie <tcondie@gmail.com>

Closes #16686 from tcondie/SPARK-18682.
2017-02-07 14:31:23 -08:00
Takeshi YAMAMURO 256a3a8013 [SPARK-18020][STREAMING][KINESIS] Checkpoint SHARD_END to finish reading closed shards
## What changes were proposed in this pull request?
This pr is to fix an issue occurred when resharding Kinesis streams; the resharding makes the KCL throw an exception because Spark does not checkpoint `SHARD_END` when finishing reading closed shards in `KinesisRecordProcessor#shutdown`. This bug finally leads to stopping subscribing new split (or merged) shards.

## How was this patch tested?
Added a test in `KinesisStreamSuite` to check if it works well when splitting/merging shards.

Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>

Closes #16213 from maropu/SPARK-18020.
2017-01-25 17:38:48 -08:00
sureshthalamati f174cdc747 [SPARK-14536][SQL] fix to handle null value in array type column for postgres.
## What changes were proposed in this pull request?

JDBC  read  is failing with  NPE due to missing null value check for array data type if the source table has null values in the array type column.  For null values Resultset.getArray()  returns null.
This PR adds null safe check to the Resultset.getArray() value before invoking method on the Array object.
## How was this patch tested?

Updated the PostgresIntegration test suite to test null values. Ran docker integration tests on my laptop.

Author: sureshthalamati <suresh.thalamati@gmail.com>

Closes #15192 from sureshthalamati/jdbc_array_null_fix-SPARK-14536.
2017-01-20 19:23:20 -08:00
uncleGen eefdf9f9dd
[SPARK-19227][SPARK-19251] remove unused imports and outdated comments
## What changes were proposed in this pull request?
remove ununsed imports and outdated comments, and fix some minor code style issue.

## How was this patch tested?
existing ut

Author: uncleGen <hustyugm@gmail.com>

Closes #16591 from uncleGen/SPARK-19227.
2017-01-18 09:44:32 +00:00
uncleGen a5e651f4c6
[SPARK-19206][DOC][DSTREAM] Fix outdated parameter descriptions in kafka010
## What changes were proposed in this pull request?

Fix outdated parameter descriptions in kafka010

## How was this patch tested?

cc koeninger  zsxwing

Author: uncleGen <hustyugm@gmail.com>

Closes #16569 from uncleGen/SPARK-19206.
2017-01-15 11:16:49 +00:00
hyukjinkwon 4e27578faa
[SPARK-18922][SQL][CORE][STREAMING][TESTS] Fix all identified tests failed due to path and resource-not-closed problems on Windows
## What changes were proposed in this pull request?

This PR proposes to fix all the test failures identified by testing with AppVeyor.

**Scala - aborted tests**

```
WindowQuerySuite:
  Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.execution.WindowQuerySuite *** ABORTED *** (156 milliseconds)
   org.apache.spark.sql.AnalysisException: LOAD DATA input path does not exist: C:projectssparksqlhive   argetscala-2.11   est-classesdatafilespart_tiny.txt;

OrcSourceSuite:
 Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.orc.OrcSourceSuite *** ABORTED *** (62 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

ParquetMetastoreSuite:
 Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.ParquetMetastoreSuite *** ABORTED *** (4 seconds, 703 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

ParquetSourceSuite:
 Exception encountered when attempting to run a suite with class name: org.apache.spark.sql.hive.ParquetSourceSuite *** ABORTED *** (3 seconds, 907 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark  arget mpspark-581a6575-454f-4f21-a516-a07f95266143;

KafkaRDDSuite:
 Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.KafkaRDDSuite *** ABORTED *** (5 seconds, 212 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-4722304d-213e-4296-b556-951df1a46807

DirectKafkaStreamSuite:
 Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.DirectKafkaStreamSuite *** ABORTED *** (7 seconds, 127 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-d0d3eba7-4215-4e10-b40e-bb797e89338e
   at org.apache.spark.util.Utils$.deleteRecursively(Utils.scala:1010)

ReliableKafkaStreamSuite
 Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.ReliableKafkaStreamSuite *** ABORTED *** (5 seconds, 498 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-d33e45a0-287e-4bed-acae-ca809a89d888

KafkaStreamSuite:
 Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.KafkaStreamSuite *** ABORTED *** (2 seconds, 892 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-59c9d169-5a56-4519-9ef0-cefdbd3f2e6c

KafkaClusterSuite:
 Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka.KafkaClusterSuite *** ABORTED *** (1 second, 690 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-3ef402b0-8689-4a60-85ae-e41e274f179d

DirectKafkaStreamSuite:
 Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka010.DirectKafkaStreamSuite *** ABORTED *** (59 seconds, 626 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-426107da-68cf-4d94-b0d6-1f428f1c53f6

KafkaRDDSuite:
Exception encountered when attempting to run a suite with class name: org.apache.spark.streaming.kafka010.KafkaRDDSuite *** ABORTED *** (2 minutes, 6 seconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-b9ce7929-5dae-46ab-a0c4-9ef6f58fbc2
```

**Java - failed tests**

```
Test org.apache.spark.streaming.kafka.JavaKafkaRDDSuite.testKafkaRDD failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-1cee32f4-4390-4321-82c9-e8616b3f0fb0, took 9.61 sec

Test org.apache.spark.streaming.kafka.JavaKafkaStreamSuite.testKafkaStream failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-f42695dd-242e-4b07-847c-f299b8e4676e, took 11.797 sec

Test org.apache.spark.streaming.kafka.JavaDirectKafkaStreamSuite.testKafkaStream failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-85c0d062-78cf-459c-a2dd-7973572101ce, took 1.581 sec

Test org.apache.spark.streaming.kafka010.JavaKafkaRDDSuite.testKafkaRDD failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-49eb6b5c-8366-47a6-83f2-80c443c48280, took 17.895 sec

org.apache.spark.streaming.kafka010.JavaDirectKafkaStreamSuite.testKafkaStream failed: java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-898cf826-d636-4b1c-a61a-c12a364c02e7, took 8.858 sec
```

**Scala - failed tests**

```
PartitionProviderCompatibilitySuite:
 - insert overwrite partition of new datasource table overwrites just partition *** FAILED *** (828 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-bb6337b9-4f99-45ab-ad2c-a787ab965c09

 - SPARK-18635 special chars in partition values - partition management true *** FAILED *** (5 seconds, 360 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - SPARK-18635 special chars in partition values - partition management false *** FAILED *** (141 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```

```
UtilsSuite:
 - reading offset bytes of a file (compressed) *** FAILED *** (0 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-ecb2b7d5-db8b-43a7-b268-1bf242b5a491

 - reading offset bytes across multiple files (compressed) *** FAILED *** (0 milliseconds)
   java.io.IOException: Failed to delete: C:\projects\spark\target\tmp\spark-25cc47a8-1faa-4da5-8862-cf174df63ce0
```

```
StatisticsSuite:
 - MetastoreRelations fallback to HDFS for size estimation *** FAILED *** (110 milliseconds)
   org.apache.spark.sql.catalyst.analysis.NoSuchTableException: Table or view 'csv_table' not found in database 'default';
```

```
SQLQuerySuite:
 - permanent UDTF *** FAILED *** (125 milliseconds)
   org.apache.spark.sql.AnalysisException: Undefined function: 'udtf_count_temp'. This function is neither a registered temporary function nor a permanent function registered in the database 'default'.; line 1 pos 24

 - describe functions - user defined functions *** FAILED *** (125 milliseconds)
   org.apache.spark.sql.AnalysisException: Undefined function: 'udtf_count'. This function is neither a registered temporary function nor a permanent function registered in the database 'default'.; line 1 pos 7

 - CTAS without serde with location *** FAILED *** (16 milliseconds)
   java.lang.IllegalArgumentException: java.net.URISyntaxException: Relative path in absolute URI: file:C:projectsspark%09arget%09mpspark-ed673d73-edfc-404e-829e-2e2b9725d94e/c1

 - derived from Hive query file: drop_database_removes_partition_dirs.q *** FAILED *** (47 milliseconds)
   java.lang.IllegalArgumentException: java.net.URISyntaxException: Relative path in absolute URI: file:C:projectsspark%09arget%09mpspark-d2ddf08e-699e-45be-9ebd-3dfe619680fe/drop_database_removes_partition_dirs_table

 - derived from Hive query file: drop_table_removes_partition_dirs.q *** FAILED *** (0 milliseconds)
   java.lang.IllegalArgumentException: java.net.URISyntaxException: Relative path in absolute URI: file:C:projectsspark%09arget%09mpspark-d2ddf08e-699e-45be-9ebd-3dfe619680fe/drop_table_removes_partition_dirs_table2

 - SPARK-17796 Support wildcard character in filename for LOAD DATA LOCAL INPATH *** FAILED *** (109 milliseconds)
   java.nio.file.InvalidPathException: Illegal char <:> at index 2: /C:/projects/spark/sql/hive/projectsspark	arget	mpspark-1a122f8c-dfb3-46c4-bab1-f30764baee0e/*part-r*
```

```
HiveDDLSuite:
 - drop external tables in default database *** FAILED *** (16 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - add/drop partitions - external table *** FAILED *** (16 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - create/drop database - location without pre-created directory *** FAILED *** (16 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - create/drop database - location with pre-created directory *** FAILED *** (32 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - drop database containing tables - CASCADE *** FAILED *** (94 milliseconds)
   CatalogDatabase(db1,,file:/C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be/db1.db,Map()) did not equal CatalogDatabase(db1,,file:C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be\db1.db,Map()) (HiveDDLSuite.scala:675)

 - drop an empty database - CASCADE *** FAILED *** (63 milliseconds)
   CatalogDatabase(db1,,file:/C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be/db1.db,Map()) did not equal CatalogDatabase(db1,,file:C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be\db1.db,Map()) (HiveDDLSuite.scala:675)

 - drop database containing tables - RESTRICT *** FAILED *** (47 milliseconds)
   CatalogDatabase(db1,,file:/C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be/db1.db,Map()) did not equal CatalogDatabase(db1,,file:C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be\db1.db,Map()) (HiveDDLSuite.scala:675)

 - drop an empty database - RESTRICT *** FAILED *** (47 milliseconds)
   CatalogDatabase(db1,,file:/C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be/db1.db,Map()) did not equal CatalogDatabase(db1,,file:C:/projects/spark/target/tmp/warehouse-d0665ee0-1e39-4805-b471-0b764f7838be\db1.db,Map()) (HiveDDLSuite.scala:675)

 - CREATE TABLE LIKE an external data source table *** FAILED *** (140 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-c5eba16d-07ae-4186-95bb-21c5811cf888;

 - CREATE TABLE LIKE an external Hive serde table *** FAILED *** (16 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - desc table for data source table - no user-defined schema *** FAILED *** (125 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-e8bf5bf5-721a-4cbe-9d6	at scala.collection.immutable.List.foreach(List.scala:381)d-5543a8301c1d;
```

```
MetastoreDataSourcesSuite
 - CTAS: persisted bucketed data source table *** FAILED *** (16 milliseconds)
   java.lang.IllegalArgumentException: Can not create a Path from an empty string
```

```
ShowCreateTableSuite:
 - simple external hive table *** FAILED *** (0 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```

```
PartitionedTablePerfStatsSuite:
 - hive table: partitioned pruned table reports only selected files *** FAILED *** (313 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - datasource table: partitioned pruned table reports only selected files *** FAILED *** (219 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-311f45f8-d064-4023-a4bb-e28235bff64d;

 - hive table: lazy partition pruning reads only necessary partition data *** FAILED *** (203 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - datasource table: lazy partition pruning reads only necessary partition data *** FAILED *** (187 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-fde874ca-66bd-4d0b-a40f-a043b65bf957;

 - hive table: lazy partition pruning with file status caching enabled *** FAILED *** (188 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - datasource table: lazy partition pruning with file status caching enabled *** FAILED *** (187 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-e6d20183-dd68-4145-acbe-4a509849accd;

 - hive table: file status caching respects refresh table and refreshByPath *** FAILED *** (172 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - datasource table: file status caching respects refresh table and refreshByPath *** FAILED *** (203 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-8b2c9651-2adf-4d58-874f-659007e21463;

 - hive table: file status cache respects size limit *** FAILED *** (219 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - datasource table: file status cache respects size limit *** FAILED *** (171 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-7835ab57-cb48-4d2c-bb1d-b46d5a4c47e4;

 - datasource table: table setup does not scan filesystem *** FAILED *** (266 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-20598d76-c004-42a7-8061-6c56f0eda5e2;

 - hive table: table setup does not scan filesystem *** FAILED *** (266 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - hive table: num hive client calls does not scale with partition count *** FAILED *** (2 seconds, 281 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - datasource table: num hive client calls does not scale with partition count *** FAILED *** (2 seconds, 422 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-4cfed321-4d1d-4b48-8d34-5c169afff383;

 - hive table: files read and cached when filesource partition management is off *** FAILED *** (234 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);

 - datasource table: all partition data cached in memory when partition management is off *** FAILED *** (203 milliseconds)
   org.apache.spark.sql.AnalysisException: Path does not exist: file:/C:projectsspark	arget	mpspark-4bcc0398-15c9-4f6a-811e-12d40f3eec12;

 - SPARK-18700: table loaded only once even when resolved concurrently *** FAILED *** (1 second, 266 milliseconds)
   org.apache.spark.sql.AnalysisException: org.apache.hadoop.hive.ql.metadata.HiveException: MetaException(message:java.lang.IllegalArgumentException: Can not create a Path from an empty string);
```

```
HiveSparkSubmitSuite:
 - temporary Hive UDF: define a UDF and use it *** FAILED *** (2 seconds, 94 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - permanent Hive UDF: define a UDF and use it *** FAILED *** (281 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - permanent Hive UDF: use a already defined permanent function *** FAILED *** (718 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - SPARK-8368: includes jars passed in through --jars *** FAILED *** (3 seconds, 521 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - SPARK-8020: set sql conf in spark conf *** FAILED *** (0 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - SPARK-8489: MissingRequirementError during reflection *** FAILED *** (94 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - SPARK-9757 Persist Parquet relation with decimal column *** FAILED *** (16 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - SPARK-11009 fix wrong result of Window function in cluster mode *** FAILED *** (16 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - SPARK-14244 fix window partition size attribute binding failure *** FAILED *** (78 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - set spark.sql.warehouse.dir *** FAILED *** (16 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - set hive.metastore.warehouse.dir *** FAILED *** (15 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - SPARK-16901: set javax.jdo.option.ConnectionURL *** FAILED *** (16 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified

 - SPARK-18360: default table path of tables in default database should depend on the location of default database *** FAILED *** (15 milliseconds)
   java.io.IOException: Cannot run program "./bin/spark-submit" (in directory "C:\projects\spark"): CreateProcess error=2, The system cannot find the file specified
```

```
UtilsSuite:
 - resolveURIs with multiple paths *** FAILED *** (0 milliseconds)
   ".../jar3,file:/C:/pi.py[%23]py.pi,file:/C:/path%..." did not equal ".../jar3,file:/C:/pi.py[#]py.pi,file:/C:/path%..." (UtilsSuite.scala:468)
```

```
CheckpointSuite:
 - recovery with file input stream *** FAILED *** (10 seconds, 205 milliseconds)
   The code passed to eventually never returned normally. Attempted 660 times over 10.014272499999999 seconds. Last failure message: Unexpected internal error near index 1
   \
    ^. (CheckpointSuite.scala:680)
```

## How was this patch tested?

Manually via AppVeyor as below:

**Scala - aborted tests**

```
WindowQuerySuite - all passed
OrcSourceSuite:
- SPARK-18220: read Hive orc table with varchar column *** FAILED *** (4 seconds, 417 milliseconds)
  org.apache.spark.sql.execution.QueryExecutionException: FAILED: Execution Error, return code -101 from org.apache.hadoop.hive.ql.exec.mr.MapRedTask. org.apache.hadoop.io.nativeio.NativeIO$Windows.access0(Ljava/lang/String;I)Z
  at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$runHive$1.apply(HiveClientImpl.scala:625)
ParquetMetastoreSuite - all passed
ParquetSourceSuite - all passed
KafkaRDDSuite - all passed
DirectKafkaStreamSuite - all passed
ReliableKafkaStreamSuite - all passed
KafkaStreamSuite - all passed
KafkaClusterSuite - all passed
DirectKafkaStreamSuite - all passed
KafkaRDDSuite - all passed
```

**Java - failed tests**

```
org.apache.spark.streaming.kafka.JavaKafkaRDDSuite - all passed
org.apache.spark.streaming.kafka.JavaDirectKafkaStreamSuite - all passed
org.apache.spark.streaming.kafka.JavaKafkaStreamSuite - all passed
org.apache.spark.streaming.kafka010.JavaDirectKafkaStreamSuite - all passed
org.apache.spark.streaming.kafka010.JavaKafkaRDDSuite - all passed
```

**Scala - failed tests**

```
PartitionProviderCompatibilitySuite:
- insert overwrite partition of new datasource table overwrites just partition (1 second, 953 milliseconds)
- SPARK-18635 special chars in partition values - partition management true (6 seconds, 31 milliseconds)
- SPARK-18635 special chars in partition values - partition management false (4 seconds, 578 milliseconds)
```

```
UtilsSuite:
- reading offset bytes of a file (compressed) (203 milliseconds)
- reading offset bytes across multiple files (compressed) (0 milliseconds)
```

```
StatisticsSuite:
- MetastoreRelations fallback to HDFS for size estimation (94 milliseconds)
```

```
SQLQuerySuite:
 - permanent UDTF (407 milliseconds)
 - describe functions - user defined functions (441 milliseconds)
 - CTAS without serde with location (2 seconds, 831 milliseconds)
 - derived from Hive query file: drop_database_removes_partition_dirs.q (734 milliseconds)
 - derived from Hive query file: drop_table_removes_partition_dirs.q (563 milliseconds)
 - SPARK-17796 Support wildcard character in filename for LOAD DATA LOCAL INPATH (453 milliseconds)
```

```
HiveDDLSuite:
 - drop external tables in default database (3 seconds, 5 milliseconds)
 - add/drop partitions - external table (2 seconds, 750 milliseconds)
 - create/drop database - location without pre-created directory (500 milliseconds)
 - create/drop database - location with pre-created directory (407 milliseconds)
 - drop database containing tables - CASCADE (453 milliseconds)
 - drop an empty database - CASCADE (375 milliseconds)
 - drop database containing tables - RESTRICT (328 milliseconds)
 - drop an empty database - RESTRICT (391 milliseconds)
 - CREATE TABLE LIKE an external data source table (953 milliseconds)
 - CREATE TABLE LIKE an external Hive serde table (3 seconds, 782 milliseconds)
 - desc table for data source table - no user-defined schema (1 second, 150 milliseconds)
```

```
MetastoreDataSourcesSuite
 - CTAS: persisted bucketed data source table (875 milliseconds)
```

```
ShowCreateTableSuite:
 - simple external hive table (78 milliseconds)
```

```
PartitionedTablePerfStatsSuite:
 - hive table: partitioned pruned table reports only selected files (1 second, 109 milliseconds)
- datasource table: partitioned pruned table reports only selected files (860 milliseconds)
 - hive table: lazy partition pruning reads only necessary partition data (859 milliseconds)
 - datasource table: lazy partition pruning reads only necessary partition data (1 second, 219 milliseconds)
 - hive table: lazy partition pruning with file status caching enabled (875 milliseconds)
 - datasource table: lazy partition pruning with file status caching enabled (890 milliseconds)
 - hive table: file status caching respects refresh table and refreshByPath (922 milliseconds)
 - datasource table: file status caching respects refresh table and refreshByPath (640 milliseconds)
 - hive table: file status cache respects size limit (469 milliseconds)
 - datasource table: file status cache respects size limit (453 milliseconds)
 - datasource table: table setup does not scan filesystem (328 milliseconds)
 - hive table: table setup does not scan filesystem (313 milliseconds)
 - hive table: num hive client calls does not scale with partition count (5 seconds, 431 milliseconds)
 - datasource table: num hive client calls does not scale with partition count (4 seconds, 79 milliseconds)
 - hive table: files read and cached when filesource partition management is off (656 milliseconds)
 - datasource table: all partition data cached in memory when partition management is off (484 milliseconds)
 - SPARK-18700: table loaded only once even when resolved concurrently (2 seconds, 578 milliseconds)
```

```
HiveSparkSubmitSuite:
 - temporary Hive UDF: define a UDF and use it (1 second, 745 milliseconds)
 - permanent Hive UDF: define a UDF and use it (406 milliseconds)
 - permanent Hive UDF: use a already defined permanent function (375 milliseconds)
 - SPARK-8368: includes jars passed in through --jars (391 milliseconds)
 - SPARK-8020: set sql conf in spark conf (156 milliseconds)
 - SPARK-8489: MissingRequirementError during reflection (187 milliseconds)
 - SPARK-9757 Persist Parquet relation with decimal column (157 milliseconds)
 - SPARK-11009 fix wrong result of Window function in cluster mode (156 milliseconds)
 - SPARK-14244 fix window partition size attribute binding failure (156 milliseconds)
 - set spark.sql.warehouse.dir (172 milliseconds)
 - set hive.metastore.warehouse.dir (156 milliseconds)
 - SPARK-16901: set javax.jdo.option.ConnectionURL (157 milliseconds)
 - SPARK-18360: default table path of tables in default database should depend on the location of default database (172 milliseconds)
```

```
UtilsSuite:
 - resolveURIs with multiple paths (0 milliseconds)
```

```
CheckpointSuite:
 - recovery with file input stream (4 seconds, 452 milliseconds)
```

Note: after resolving the aborted tests, there is a test failure identified as below:

```
OrcSourceSuite:
- SPARK-18220: read Hive orc table with varchar column *** FAILED *** (4 seconds, 417 milliseconds)
  org.apache.spark.sql.execution.QueryExecutionException: FAILED: Execution Error, return code -101 from org.apache.hadoop.hive.ql.exec.mr.MapRedTask. org.apache.hadoop.io.nativeio.NativeIO$Windows.access0(Ljava/lang/String;I)Z
  at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$runHive$1.apply(HiveClientImpl.scala:625)
```

This does not look due to this problem so this PR does not fix it here.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16451 from HyukjinKwon/all-path-resource-fixes.
2017-01-10 13:19:21 +00:00
Niranjan Padmanabhan a1e40b1f5d
[MINOR][DOCS] Remove consecutive duplicated words/typo in Spark Repo
## What changes were proposed in this pull request?
There are many locations in the Spark repo where the same word occurs consecutively. Sometimes they are appropriately placed, but many times they are not. This PR removes the inappropriately duplicated words.

## How was this patch tested?
N/A since only docs or comments were updated.

Author: Niranjan Padmanabhan <niranjan.padmanabhan@gmail.com>

Closes #16455 from neurons/np.structure_streaming_doc.
2017-01-04 15:07:29 +00:00
Ryan Williams afd9bc1d8a [SPARK-17807][CORE] split test-tags into test-JAR
Remove spark-tag's compile-scope dependency (and, indirectly, spark-core's compile-scope transitive-dependency) on scalatest by splitting test-oriented tags into spark-tags' test JAR.

Alternative to #16303.

Author: Ryan Williams <ryan.blake.williams@gmail.com>

Closes #16311 from ryan-williams/tt.
2016-12-21 16:37:20 -08:00
Shixiong Zhu 95efc895e9 [SPARK-18588][SS][KAFKA] Create a new KafkaConsumer when error happens to fix the flaky test
## What changes were proposed in this pull request?

When KafkaSource fails on Kafka errors, we should create a new consumer to retry rather than using the existing broken one because it's possible that the broken one will fail again.

This PR also assigns a new group id to the new created consumer for a possible race condition:  the broken consumer cannot talk with the Kafka cluster in `close` but the new consumer can talk to Kafka cluster. I'm not sure if this will happen or not. Just for safety to avoid that the Kafka cluster thinks there are two consumers with the same group id in a short time window. (Note: CachedKafkaConsumer doesn't need this fix since `assign` never uses the group id.)

## How was this patch tested?

In https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/70370/console , it ran this flaky test 120 times and all passed.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16282 from zsxwing/kafka-fix.
2016-12-21 15:39:36 -08:00
Shixiong Zhu e104e55c16 [SPARK-18588][TESTS] Ignore KafkaSourceStressForDontFailOnDataLossSuite
## What changes were proposed in this pull request?

Disable KafkaSourceStressForDontFailOnDataLossSuite for now.

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16275 from zsxwing/ignore-flaky-test.
2016-12-13 18:36:36 -08:00
Takeshi YAMAMURO b08b500456
[SPARK-18620][STREAMING][KINESIS] Flatten input rates in timeline for streaming + kinesis
## What changes were proposed in this pull request?
This pr is to make input rates in timeline more flat for spark streaming + kinesis.
Since kinesis workers fetch records and push them into block generators in bulk, timeline in web UI has many spikes when `maxRates` applied (See a Figure.1 below). This fix splits fetched input records into multiple `adRecords` calls.

Figure.1 Apply `maxRates=500` in vanilla Spark
<img width="1084" alt="apply_limit in_vanilla_spark" src="https://cloud.githubusercontent.com/assets/692303/20823861/4602f300-b89b-11e6-95f3-164a37061305.png">

Figure.2 Apply `maxRates=500` in Spark with my patch
<img width="1056" alt="apply_limit in_spark_with_my_patch" src="https://cloud.githubusercontent.com/assets/692303/20823882/6c46352c-b89b-11e6-81ab-afd8abfe0cfe.png">

## How was this patch tested?
Add tests to check to split input records into multiple `addRecords` calls.

Author: Takeshi YAMAMURO <linguin.m.s@gmail.com>

Closes #16114 from maropu/SPARK-18620.
2016-12-10 05:32:04 +08:00
Tathagata Das 458fa3325e [SPARK-18776][SS] Make Offset for FileStreamSource corrected formatted in json
## What changes were proposed in this pull request?

- Changed FileStreamSource to use new FileStreamSourceOffset rather than LongOffset. The field is named as `logOffset` to make it more clear that this is a offset in the file stream log.
- Fixed bug in FileStreamSourceLog, the field endId in the FileStreamSourceLog.get(startId, endId) was not being used at all. No test caught it earlier. Only my updated tests caught it.

Other minor changes
- Dont use batchId in the FileStreamSource, as calling it batch id is extremely miss leading. With multiple sources, it may happen that a new batch has no new data from a file source. So offset of FileStreamSource != batchId after that batch.

## How was this patch tested?

Updated unit test.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #16205 from tdas/SPARK-18776.
2016-12-08 17:53:34 -08:00
Michael Armbrust 70b2bf717d [SPARK-18754][SS] Rename recentProgresses to recentProgress
Based on an informal survey, users find this option easier to understand / remember.

Author: Michael Armbrust <michael@databricks.com>

Closes #16182 from marmbrus/renameRecentProgress.
2016-12-07 15:36:29 -08:00
Shixiong Zhu edc87e1892 [SPARK-18588][TESTS] Fix flaky test: KafkaSourceStressForDontFailOnDataLossSuite
## What changes were proposed in this pull request?

Fixed the following failures:

```
org.scalatest.exceptions.TestFailedDueToTimeoutException: The code passed to eventually never returned normally. Attempted 3745 times over 1.0000790851666665 minutes. Last failure message: assertion failed: failOnDataLoss-0 not deleted after timeout.
```

```
sbt.ForkMain$ForkError: org.apache.spark.sql.streaming.StreamingQueryException: Query query-66 terminated with exception: null
	at org.apache.spark.sql.execution.streaming.StreamExecution.org$apache$spark$sql$execution$streaming$StreamExecution$$runBatches(StreamExecution.scala:252)
	at org.apache.spark.sql.execution.streaming.StreamExecution$$anon$1.run(StreamExecution.scala:146)
Caused by: sbt.ForkMain$ForkError: java.lang.NullPointerException: null
	at java.util.ArrayList.addAll(ArrayList.java:577)
	at org.apache.kafka.clients.Metadata.getClusterForCurrentTopics(Metadata.java:257)
	at org.apache.kafka.clients.Metadata.update(Metadata.java:177)
	at org.apache.kafka.clients.NetworkClient$DefaultMetadataUpdater.handleResponse(NetworkClient.java:605)
	at org.apache.kafka.clients.NetworkClient$DefaultMetadataUpdater.maybeHandleCompletedReceive(NetworkClient.java:582)
	at org.apache.kafka.clients.NetworkClient.handleCompletedReceives(NetworkClient.java:450)
	at org.apache.kafka.clients.NetworkClient.poll(NetworkClient.java:269)
	at org.apache.kafka.clients.consumer.internals.ConsumerNetworkClient.clientPoll(ConsumerNetworkClient.java:360)
	at org.apache.kafka.clients.consumer.internals.ConsumerNetworkClient.poll(ConsumerNetworkClient.java:224)
	at org.apache.kafka.clients.consumer.internals.ConsumerNetworkClient.poll(ConsumerNetworkClient.java:192)
	at org.apache.kafka.clients.consumer.internals.ConsumerNetworkClient.awaitPendingRequests(ConsumerNetworkClient.java:260)
	at org.apache.kafka.clients.consumer.internals.AbstractCoordinator.ensureActiveGroup(AbstractCoordinator.java:222)
	at org.apache.kafka.clients.consumer.internals.ConsumerCoordinator.ensurePartitionAssignment(ConsumerCoordinator.java:366)
	at org.apache.kafka.clients.consumer.KafkaConsumer.pollOnce(KafkaConsumer.java:978)
	at org.apache.kafka.clients.consumer.KafkaConsumer.poll(KafkaConsumer.java:938)
	at
...
```

## How was this patch tested?

Tested in #16048 by running many times.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16109 from zsxwing/fix-kafka-flaky-test.
2016-12-07 13:47:44 -08:00
Tathagata Das 5c6bcdbda4 [SPARK-18671][SS][TEST-MAVEN] Follow up PR to fix test for Maven
## What changes were proposed in this pull request?

Maven compilation seem to not allow resource is sql/test to be easily referred to in kafka-0-10-sql tests. So moved the kafka-source-offset-version-2.1.0 from sql test resources to kafka-0-10-sql test resources.

## How was this patch tested?

Manually ran maven test

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #16183 from tdas/SPARK-18671-1.
2016-12-06 21:51:38 -08:00
Tathagata Das 1ef6b296d7 [SPARK-18671][SS][TEST] Added tests to ensure stability of that all Structured Streaming log formats
## What changes were proposed in this pull request?

To be able to restart StreamingQueries across Spark version, we have already made the logs (offset log, file source log, file sink log) use json. We should added tests with actual json files in the Spark such that any incompatible changes in reading the logs is immediately caught. This PR add tests for FileStreamSourceLog, FileStreamSinkLog, and OffsetSeqLog.

## How was this patch tested?
new unit tests

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #16128 from tdas/SPARK-18671.
2016-12-06 13:05:22 -08:00
Reynold Xin c7c7265950 [SPARK-18695] Bump master branch version to 2.2.0-SNAPSHOT
## What changes were proposed in this pull request?
This patch bumps master branch version to 2.2.0-SNAPSHOT.

## How was this patch tested?
N/A

Author: Reynold Xin <rxin@databricks.com>

Closes #16126 from rxin/SPARK-18695.
2016-12-02 21:09:37 -08:00
Tathagata Das c3d08e2f29 [SPARK-18516][SQL] Split state and progress in streaming
This PR separates the status of a `StreamingQuery` into two separate APIs:
 - `status` - describes the status of a `StreamingQuery` at this moment, including what phase of processing is currently happening and if data is available.
 - `recentProgress` - an array of statistics about the most recent microbatches that have executed.

A recent progress contains the following information:
```
{
  "id" : "2be8670a-fce1-4859-a530-748f29553bb6",
  "name" : "query-29",
  "timestamp" : 1479705392724,
  "inputRowsPerSecond" : 230.76923076923077,
  "processedRowsPerSecond" : 10.869565217391303,
  "durationMs" : {
    "triggerExecution" : 276,
    "queryPlanning" : 3,
    "getBatch" : 5,
    "getOffset" : 3,
    "addBatch" : 234,
    "walCommit" : 30
  },
  "currentWatermark" : 0,
  "stateOperators" : [ ],
  "sources" : [ {
    "description" : "KafkaSource[Subscribe[topic-14]]",
    "startOffset" : {
      "topic-14" : {
        "2" : 0,
        "4" : 1,
        "1" : 0,
        "3" : 0,
        "0" : 0
      }
    },
    "endOffset" : {
      "topic-14" : {
        "2" : 1,
        "4" : 2,
        "1" : 0,
        "3" : 0,
        "0" : 1
      }
    },
    "numRecords" : 3,
    "inputRowsPerSecond" : 230.76923076923077,
    "processedRowsPerSecond" : 10.869565217391303
  } ]
}
```

Additionally, in order to make it possible to correlate progress updates across restarts, we change the `id` field from an integer that is unique with in the JVM to a `UUID` that is globally unique.

Author: Tathagata Das <tathagata.das1565@gmail.com>
Author: Michael Armbrust <michael@databricks.com>

Closes #15954 from marmbrus/queryProgress.
2016-11-29 17:24:17 -08:00
hyukjinkwon f830bb9170
[SPARK-3359][DOCS] Make javadoc8 working for unidoc/genjavadoc compatibility in Java API documentation
## What changes were proposed in this pull request?

This PR make `sbt unidoc` complete with Java 8.

This PR roughly includes several fixes as below:

- Fix unrecognisable class and method links in javadoc by changing it from `[[..]]` to `` `...` ``

  ```diff
  - * A column that will be computed based on the data in a [[DataFrame]].
  + * A column that will be computed based on the data in a `DataFrame`.
  ```

- Fix throws annotations so that they are recognisable in javadoc

- Fix URL links to `<a href="http..."></a>`.

  ```diff
  - * [[http://en.wikipedia.org/wiki/Decision_tree_learning Decision tree]] model for regression.
  + * <a href="http://en.wikipedia.org/wiki/Decision_tree_learning">
  + * Decision tree (Wikipedia)</a> model for regression.
  ```

  ```diff
  -   * see http://en.wikipedia.org/wiki/Receiver_operating_characteristic
  +   * see <a href="http://en.wikipedia.org/wiki/Receiver_operating_characteristic">
  +   * Receiver operating characteristic (Wikipedia)</a>
  ```

- Fix < to > to

  - `greater than`/`greater than or equal to` or `less than`/`less than or equal to` where applicable.

  - Wrap it with `{{{...}}}` to print them in javadoc or use `{code ...}` or `{literal ..}`. Please refer https://github.com/apache/spark/pull/16013#discussion_r89665558

- Fix `</p>` complaint

## How was this patch tested?

Manually tested by `jekyll build` with Java 7 and 8

```
java version "1.7.0_80"
Java(TM) SE Runtime Environment (build 1.7.0_80-b15)
Java HotSpot(TM) 64-Bit Server VM (build 24.80-b11, mixed mode)
```

```
java version "1.8.0_45"
Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
```

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #16013 from HyukjinKwon/SPARK-3359-errors-more.
2016-11-29 09:41:32 +00:00
Shixiong Zhu 1633ff3b6c [SPARK-18588][SS][KAFKA] Ignore the flaky kafka test
## What changes were proposed in this pull request?

Ignore the flaky test to unblock other PRs while I'm debugging it.

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #16051 from zsxwing/ignore-flaky-kafka-test.
2016-11-28 21:04:20 -08:00
Shixiong Zhu d0212eb0f2 [SPARK-18530][SS][KAFKA] Change Kafka timestamp column type to TimestampType
## What changes were proposed in this pull request?

Changed Kafka timestamp column type to TimestampType.

## How was this patch tested?

`test("Kafka column types")`.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #15969 from zsxwing/SPARK-18530.
2016-11-22 16:49:15 -08:00
Shixiong Zhu 2fd101b2f0 [SPARK-18373][SPARK-18529][SS][KAFKA] Make failOnDataLoss=false work with Spark jobs
## What changes were proposed in this pull request?

This PR adds `CachedKafkaConsumer.getAndIgnoreLostData` to handle corner cases of `failOnDataLoss=false`.

It also resolves [SPARK-18529](https://issues.apache.org/jira/browse/SPARK-18529) after refactoring codes: Timeout will throw a TimeoutException.

## How was this patch tested?

Because I cannot find any way to manually control the Kafka server to clean up logs, it's impossible to write unit tests for each corner case. Therefore, I just created `test("stress test for failOnDataLoss=false")` which should cover most of corner cases.

I also modified some existing tests to test for both `failOnDataLoss=false` and `failOnDataLoss=true` to make sure it doesn't break existing logic.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #15820 from zsxwing/failOnDataLoss.
2016-11-22 14:15:57 -08:00
hyukjinkwon d5b1d5fc80
[SPARK-18445][BUILD][DOCS] Fix the markdown for Note:/NOTE:/Note that/'''Note:''' across Scala/Java API documentation
## What changes were proposed in this pull request?

It seems in Scala/Java,

- `Note:`
- `NOTE:`
- `Note that`
- `'''Note:'''`
- `note`

This PR proposes to fix those to `note` to be consistent.

**Before**

- Scala
  ![2016-11-17 6 16 39](https://cloud.githubusercontent.com/assets/6477701/20383180/1a7aed8c-acf2-11e6-9611-5eaf6d52c2e0.png)

- Java
  ![2016-11-17 6 14 41](https://cloud.githubusercontent.com/assets/6477701/20383096/c8ffc680-acf1-11e6-914a-33460bf1401d.png)

**After**

- Scala
  ![2016-11-17 6 16 44](https://cloud.githubusercontent.com/assets/6477701/20383167/09940490-acf2-11e6-937a-0d5e1dc2cadf.png)

- Java
  ![2016-11-17 6 13 39](https://cloud.githubusercontent.com/assets/6477701/20383132/e7c2a57e-acf1-11e6-9c47-b849674d4d88.png)

## How was this patch tested?

The notes were found via

```bash
grep -r "NOTE: " . | \ # Note:|NOTE:|Note that|'''Note:'''
grep -v "// NOTE: " | \  # starting with // does not appear in API documentation.
grep -E '.scala|.java' | \ # java/scala files
grep -v Suite | \ # exclude tests
grep -v Test | \ # exclude tests
grep -e 'org.apache.spark.api.java' \ # packages appear in API documenation
-e 'org.apache.spark.api.java.function' \ # note that this is a regular expression. So actual matches were mostly `org/apache/spark/api/java/functions ...`
-e 'org.apache.spark.api.r' \
...
```

```bash
grep -r "Note that " . | \ # Note:|NOTE:|Note that|'''Note:'''
grep -v "// Note that " | \  # starting with // does not appear in API documentation.
grep -E '.scala|.java' | \ # java/scala files
grep -v Suite | \ # exclude tests
grep -v Test | \ # exclude tests
grep -e 'org.apache.spark.api.java' \ # packages appear in API documenation
-e 'org.apache.spark.api.java.function' \
-e 'org.apache.spark.api.r' \
...
```

```bash
grep -r "Note: " . | \ # Note:|NOTE:|Note that|'''Note:'''
grep -v "// Note: " | \  # starting with // does not appear in API documentation.
grep -E '.scala|.java' | \ # java/scala files
grep -v Suite | \ # exclude tests
grep -v Test | \ # exclude tests
grep -e 'org.apache.spark.api.java' \ # packages appear in API documenation
-e 'org.apache.spark.api.java.function' \
-e 'org.apache.spark.api.r' \
...
```

```bash
grep -r "'''Note:'''" . | \ # Note:|NOTE:|Note that|'''Note:'''
grep -v "// '''Note:''' " | \  # starting with // does not appear in API documentation.
grep -E '.scala|.java' | \ # java/scala files
grep -v Suite | \ # exclude tests
grep -v Test | \ # exclude tests
grep -e 'org.apache.spark.api.java' \ # packages appear in API documenation
-e 'org.apache.spark.api.java.function' \
-e 'org.apache.spark.api.r' \
...
```

And then fixed one by one comparing with API documentation/access modifiers.

After that, manually tested via `jekyll build`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #15889 from HyukjinKwon/SPARK-18437.
2016-11-19 11:24:15 +00:00
Sean Owen 43a26899e5
[SPARK-18400][STREAMING] NPE when resharding Kinesis Stream
## What changes were proposed in this pull request?

Avoid NPE in KinesisRecordProcessor when shutdown happens without successful init

## How was this patch tested?

Existing tests

Author: Sean Owen <sowen@cloudera.com>

Closes #15882 from srowen/SPARK-18400.
2016-11-16 10:16:36 +00:00
cody koeninger 89d1fa58db [SPARK-17510][STREAMING][KAFKA] config max rate on a per-partition basis
## What changes were proposed in this pull request?

Allow configuration of max rate on a per-topicpartition basis.
## How was this patch tested?

Unit tests.

The reporter (Jeff Nadler) said he could test on his workload, so let's wait on that report.

Author: cody koeninger <cody@koeninger.org>

Closes #15132 from koeninger/SPARK-17510.
2016-11-14 11:10:37 -08:00
wm624@hotmail.com 22a9d064e9
[SPARK-14914][CORE] Fix Resource not closed after using, for unit tests and example
## What changes were proposed in this pull request?

This is a follow-up work of #15618.

Close file source;
For any newly created streaming context outside the withContext, explicitly close the context.

## How was this patch tested?

Existing unit tests.

Author: wm624@hotmail.com <wm624@hotmail.com>

Closes #15818 from wangmiao1981/rtest.
2016-11-10 10:54:36 +00:00
Tyson Condie 3f62e1b5d9 [SPARK-17829][SQL] Stable format for offset log
## What changes were proposed in this pull request?

Currently we use java serialization for the WAL that stores the offsets contained in each batch. This has two main issues:
It can break across spark releases (though this is not the only thing preventing us from upgrading a running query)
It is unnecessarily opaque to the user.
I'd propose we require offsets to provide a user readable serialization and use that instead. JSON is probably a good option.
## How was this patch tested?

Tests were added for KafkaSourceOffset in [KafkaSourceOffsetSuite](external/kafka-0-10-sql/src/test/scala/org/apache/spark/sql/kafka010/KafkaSourceOffsetSuite.scala) and for LongOffset in [OffsetSuite](sql/core/src/test/scala/org/apache/spark/sql/streaming/OffsetSuite.scala)

Please review https://cwiki.apache.org/confluence/display/SPARK/Contributing+to+Spark before opening a pull request.

zsxwing marmbrus

Author: Tyson Condie <tcondie@gmail.com>
Author: Tyson Condie <tcondie@clash.local>

Closes #15626 from tcondie/spark-8360.
2016-11-09 15:03:22 -08:00
Tathagata Das b06c23db9a [SPARK-18283][STRUCTURED STREAMING][KAFKA] Added test to check whether default starting offset in latest
## What changes were proposed in this pull request?

Added test to check whether default starting offset in latest

## How was this patch tested?
new unit test

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #15778 from tdas/SPARK-18283.
2016-11-07 10:43:36 -08:00
cody koeninger 67659c9afa [SPARK-18212][SS][KAFKA] increase executor poll timeout
## What changes were proposed in this pull request?

Increase poll timeout to try and address flaky test

## How was this patch tested?

Ran existing unit tests

Author: cody koeninger <cody@koeninger.org>

Closes #15737 from koeninger/SPARK-18212.
2016-11-03 14:43:25 -07:00
cody koeninger 1042325805 [SPARK-17813][SQL][KAFKA] Maximum data per trigger
## What changes were proposed in this pull request?

maxOffsetsPerTrigger option for rate limiting, proportionally based on volume of different topicpartitions.

## How was this patch tested?

Added unit test

Author: cody koeninger <cody@koeninger.org>

Closes #15527 from koeninger/SPARK-17813.
2016-10-27 10:30:59 -07:00
cody koeninger 268ccb9a48 [SPARK-17812][SQL][KAFKA] Assign and specific startingOffsets for structured stream
## What changes were proposed in this pull request?

startingOffsets takes specific per-topicpartition offsets as a json argument, usable with any consumer strategy

assign with specific topicpartitions as a consumer strategy

## How was this patch tested?

Unit tests

Author: cody koeninger <cody@koeninger.org>

Closes #15504 from koeninger/SPARK-17812.
2016-10-21 15:55:04 -07:00
jerryshao 947f4f2527 [SPARK-17999][KAFKA][SQL] Add getPreferredLocations for KafkaSourceRDD
## What changes were proposed in this pull request?

The newly implemented Structured Streaming `KafkaSource` did calculate the preferred locations for each topic partition, but didn't offer this information through RDD's `getPreferredLocations` method. So here propose to add this method in `KafkaSourceRDD`.

## How was this patch tested?

Manual verification.

Author: jerryshao <sshao@hortonworks.com>

Closes #15545 from jerryshao/SPARK-17999.
2016-10-20 10:50:34 -07:00
cody koeninger cd106b050f [SPARK-17841][STREAMING][KAFKA] drain commitQueue
## What changes were proposed in this pull request?

Actually drain commit queue rather than just iterating it.
iterator() on a concurrent linked queue won't remove items from the queue, poll() will.

## How was this patch tested?
Unit tests

Author: cody koeninger <cody@koeninger.org>

Closes #15407 from koeninger/SPARK-17841.
2016-10-18 14:01:49 -07:00
Tathagata Das 7106866c22 [SPARK-17731][SQL][STREAMING] Metrics for structured streaming
## What changes were proposed in this pull request?

Metrics are needed for monitoring structured streaming apps. Here is the design doc for implementing the necessary metrics.
https://docs.google.com/document/d/1NIdcGuR1B3WIe8t7VxLrt58TJB4DtipWEbj5I_mzJys/edit?usp=sharing

Specifically, this PR adds the following public APIs changes.

### New APIs
- `StreamingQuery.status` returns a `StreamingQueryStatus` object (renamed from `StreamingQueryInfo`, see later)

- `StreamingQueryStatus` has the following important fields
  - inputRate - Current rate (rows/sec) at which data is being generated by all the sources
  - processingRate - Current rate (rows/sec) at which the query is processing data from
                                  all the sources
  - ~~outputRate~~ - *Does not work with wholestage codegen*
  - latency - Current average latency between the data being available in source and the sink writing the corresponding output
  - sourceStatuses: Array[SourceStatus] - Current statuses of the sources
  - sinkStatus: SinkStatus - Current status of the sink
  - triggerStatus - Low-level detailed status of the last completed/currently active trigger
    - latencies - getOffset, getBatch, full trigger, wal writes
    - timestamps - trigger start, finish, after getOffset, after getBatch
    - numRows - input, output, state total/updated rows for aggregations

- `SourceStatus` has the following important fields
  - inputRate - Current rate (rows/sec) at which data is being generated by the source
  - processingRate - Current rate (rows/sec) at which the query is processing data from the source
  - triggerStatus - Low-level detailed status of the last completed/currently active trigger

- Python API for `StreamingQuery.status()`

### Breaking changes to existing APIs
**Existing direct public facing APIs**
- Deprecated direct public-facing APIs `StreamingQuery.sourceStatuses` and `StreamingQuery.sinkStatus` in favour of `StreamingQuery.status.sourceStatuses/sinkStatus`.
  - Branch 2.0 should have it deprecated, master should have it removed.

**Existing advanced listener APIs**
- `StreamingQueryInfo` renamed to `StreamingQueryStatus` for consistency with `SourceStatus`, `SinkStatus`
   - Earlier StreamingQueryInfo was used only in the advanced listener API, but now it is used in direct public-facing API (StreamingQuery.status)

- Field `queryInfo` in listener events `QueryStarted`, `QueryProgress`, `QueryTerminated` changed have name `queryStatus` and return type `StreamingQueryStatus`.

- Field `offsetDesc` in `SourceStatus` was Option[String], converted it to `String`.

- For `SourceStatus` and `SinkStatus` made constructor private instead of private[sql] to make them more java-safe. Instead added `private[sql] object SourceStatus/SinkStatus.apply()` which are harder to accidentally use in Java.

## How was this patch tested?

Old and new unit tests.
- Rate calculation and other internal logic of StreamMetrics tested by StreamMetricsSuite.
- New info in statuses returned through StreamingQueryListener is tested in StreamingQueryListenerSuite.
- New and old info returned through StreamingQuery.status is tested in StreamingQuerySuite.
- Source-specific tests for making sure input rows are counted are is source-specific test suites.
- Additional tests to test minor additions in LocalTableScanExec, StateStore, etc.

Metrics also manually tested using Ganglia sink

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #15307 from tdas/SPARK-17731.
2016-10-13 13:36:26 -07:00
Shixiong Zhu 08eac35609 [SPARK-17834][SQL] Fetch the earliest offsets manually in KafkaSource instead of counting on KafkaConsumer
## What changes were proposed in this pull request?

Because `KafkaConsumer.poll(0)` may update the partition offsets, this PR just calls `seekToBeginning` to manually set the earliest offsets for the KafkaSource initial offsets.

## How was this patch tested?

Existing tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #15397 from zsxwing/SPARK-17834.
2016-10-13 13:31:50 -07:00
cody koeninger f9a56a153e [SPARK-17782][STREAMING][KAFKA] alternative eliminate race condition of poll twice
## What changes were proposed in this pull request?

Alternative approach to https://github.com/apache/spark/pull/15387

Author: cody koeninger <cody@koeninger.org>

Closes #15401 from koeninger/SPARK-17782-alt.
2016-10-12 15:22:06 -07:00
Shixiong Zhu 75b9e35141 [SPARK-17346][SQL][TESTS] Fix the flaky topic deletion in KafkaSourceStressSuite
## What changes were proposed in this pull request?

A follow up Pr for SPARK-17346 to fix flaky `org.apache.spark.sql.kafka010.KafkaSourceStressSuite`.

Test log: https://amplab.cs.berkeley.edu/jenkins/job/spark-master-test-sbt-hadoop-2.4/1855/testReport/junit/org.apache.spark.sql.kafka010/KafkaSourceStressSuite/_It_is_not_a_test_/

Looks like deleting the Kafka internal topic `__consumer_offsets` is flaky. This PR just simply ignores internal topics.

## How was this patch tested?

Existing tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #15384 from zsxwing/SPARK-17346-flaky-test.
2016-10-11 10:53:07 -07:00
Christian Kadner 49d11d4998 [SPARK-17803][TESTS] Upgrade docker-client dependency
[SPARK-17803: Docker integration tests don't run with "Docker for Mac"](https://issues.apache.org/jira/browse/SPARK-17803)

## What changes were proposed in this pull request?

This PR upgrades the [docker-client](https://mvnrepository.com/artifact/com.spotify/docker-client) dependency from [3.6.6](https://mvnrepository.com/artifact/com.spotify/docker-client/3.6.6) to [5.0.2](https://mvnrepository.com/artifact/com.spotify/docker-client/5.0.2) to enable _Docker for Mac_ users to run the `docker-integration-tests` out of the box.

The very latest docker-client version is [6.0.0](https://mvnrepository.com/artifact/com.spotify/docker-client/6.0.0) but that has one additional dependency and no usage yet.

## How was this patch tested?

The code change was tested on Mac OS X Yosemite with both _Docker Toolbox_ as well as _Docker for Mac_ and on Linux Ubuntu 14.04.

```
$ build/mvn -Pyarn -Phadoop-2.6 -Dhadoop.version=2.6.0 -Phive -Phive-thriftserver -DskipTests clean package

$ build/mvn -Pdocker-integration-tests -Pscala-2.11 -pl :spark-docker-integration-tests_2.11 clean compile test
```

Author: Christian Kadner <ckadner@us.ibm.com>

Closes #15378 from ckadner/SPARK-17803_Docker_for_Mac.
2016-10-06 14:28:49 -07:00
Shixiong Zhu b678e465af [SPARK-17346][SQL][TEST-MAVEN] Generate the sql test jar to fix the maven build
## What changes were proposed in this pull request?

Generate the sql test jar to fix the maven build

## How was this patch tested?

Jenkins

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #15368 from zsxwing/sql-test-jar.
2016-10-05 18:11:31 -07:00
Shixiong Zhu 9293734d35 [SPARK-17346][SQL] Add Kafka source for Structured Streaming
## What changes were proposed in this pull request?

This PR adds a new project ` external/kafka-0-10-sql` for Structured Streaming Kafka source.

It's based on the design doc: https://docs.google.com/document/d/19t2rWe51x7tq2e5AOfrsM9qb8_m7BRuv9fel9i0PqR8/edit?usp=sharing

tdas did most of work and part of them was inspired by koeninger's work.

### Introduction

The Kafka source is a structured streaming data source to poll data from Kafka. The schema of reading data is as follows:

Column | Type
---- | ----
key | binary
value | binary
topic | string
partition | int
offset | long
timestamp | long
timestampType | int

The source can deal with deleting topics. However, the user should make sure there is no Spark job processing the data when deleting a topic.

### Configuration

The user can use `DataStreamReader.option` to set the following configurations.

Kafka Source's options | value | default | meaning
------ | ------- | ------ | -----
startingOffset | ["earliest", "latest"] | "latest" | The start point when a query is started, either "earliest" which is from the earliest offset, or "latest" which is just from the latest offset. Note: This only applies when a new Streaming query is started, and that resuming will always pick up from where the query left off.
failOnDataLost | [true, false] | true | Whether to fail the query when it's possible that data is lost (e.g., topics are deleted, or offsets are out of range). This may be a false alarm. You can disable it when it doesn't work as you expected.
subscribe | A comma-separated list of topics | (none) | The topic list to subscribe. Only one of "subscribe" and "subscribeParttern" options can be specified for Kafka source.
subscribePattern | Java regex string | (none) | The pattern used to subscribe the topic. Only one of "subscribe" and "subscribeParttern" options can be specified for Kafka source.
kafka.consumer.poll.timeoutMs | long | 512 | The timeout in milliseconds to poll data from Kafka in executors
fetchOffset.numRetries | int | 3 | Number of times to retry before giving up fatch Kafka latest offsets.
fetchOffset.retryIntervalMs | long | 10 | milliseconds to wait before retrying to fetch Kafka offsets

Kafka's own configurations can be set via `DataStreamReader.option` with `kafka.` prefix, e.g, `stream.option("kafka.bootstrap.servers", "host:port")`

### Usage

* Subscribe to 1 topic
```Scala
spark
  .readStream
  .format("kafka")
  .option("kafka.bootstrap.servers", "host:port")
  .option("subscribe", "topic1")
  .load()
```

* Subscribe to multiple topics
```Scala
spark
  .readStream
  .format("kafka")
  .option("kafka.bootstrap.servers", "host:port")
  .option("subscribe", "topic1,topic2")
  .load()
```

* Subscribe to a pattern
```Scala
spark
  .readStream
  .format("kafka")
  .option("kafka.bootstrap.servers", "host:port")
  .option("subscribePattern", "topic.*")
  .load()
```

## How was this patch tested?

The new unit tests.

Author: Shixiong Zhu <shixiong@databricks.com>
Author: Tathagata Das <tathagata.das1565@gmail.com>
Author: Shixiong Zhu <zsxwing@gmail.com>
Author: cody koeninger <cody@koeninger.org>

Closes #15102 from zsxwing/kafka-source.
2016-10-05 16:45:45 -07:00
Josh Rosen d7ee12211a [SPARK-17418] Prevent kinesis-asl-assembly artifacts from being published
This patch updates the `kinesis-asl-assembly` build to prevent that module from being published as part of Maven releases and snapshot builds.

The `kinesis-asl-assembly` includes classes from the Kinesis Client Library (KCL) and Kinesis Producer Library (KPL), both of which are licensed under the Amazon Software License and are therefore prohibited from being distributed in Apache releases.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #15167 from JoshRosen/stop-publishing-kinesis-assembly.
2016-09-21 11:38:10 -07:00
sureshthalamati cdea1d1343 [SPARK-17473][SQL] fixing docker integration tests error due to different versions of jars.
## What changes were proposed in this pull request?
Docker tests are using older version  of jersey jars (1.19),  which was used in older releases of spark.  In 2.0 releases Spark was upgraded to use 2.x verison of Jersey. After  upgrade to new versions, docker tests  are  failing with AbstractMethodError.  Now that spark is upgraded  to 2.x jersey version, using of  shaded docker jars  may not be required any more.  Removed the exclusions/overrides of jersey related classes from pom file, and changed the docker-client to use regular jar instead of shaded one.

## How was this patch tested?

Tested  using existing  docker-integration-tests

Author: sureshthalamati <suresh.thalamati@gmail.com>

Closes #15114 from sureshthalamati/docker_testfix-spark-17473.
2016-09-19 09:56:16 -07:00
Adam Roberts fc1efb720c [SPARK-17534][TESTS] Increase timeouts for DirectKafkaStreamSuite tests
**## What changes were proposed in this pull request?**
There are two tests in this suite that are particularly flaky on the following hardware:

2x Intel(R) Xeon(R) CPU E5-2697 v2  2.70GHz and 16 GB of RAM, 1 TB HDD

This simple PR increases the timeout times and batch duration so they can reliably pass

**## How was this patch tested?**
Existing unit tests with the two core box where I was seeing the failures often

Author: Adam Roberts <aroberts@uk.ibm.com>

Closes #15094 from a-roberts/patch-6.
2016-09-16 10:20:50 +01:00
Liwei Lin 3ce3a282c8 [SPARK-17359][SQL][MLLIB] Use ArrayBuffer.+=(A) instead of ArrayBuffer.append(A) in performance critical paths
## What changes were proposed in this pull request?

We should generally use `ArrayBuffer.+=(A)` rather than `ArrayBuffer.append(A)`, because `append(A)` would involve extra boxing / unboxing.

## How was this patch tested?

N/A

Author: Liwei Lin <lwlin7@gmail.com>

Closes #14914 from lw-lin/append_to_plus_eq_v2.
2016-09-07 10:04:00 +01:00
Josh Rosen a133057ce5 [SPARK-17229][SQL] PostgresDialect shouldn't widen float and short types during reads
## What changes were proposed in this pull request?

When reading float4 and smallint columns from PostgreSQL, Spark's `PostgresDialect` widens these types to Decimal and Integer rather than using the narrower Float and Short types. According to https://www.postgresql.org/docs/7.1/static/datatype.html#DATATYPE-TABLE, Postgres maps the `smallint` type to a signed two-byte integer and the `real` / `float4` types to single precision floating point numbers.

This patch fixes this by adding more special-cases to `getCatalystType`, similar to what was done for the Derby JDBC dialect. I also fixed a similar problem in the write path which causes Spark to create integer columns in Postgres for what should have been ShortType columns.

## How was this patch tested?

New test cases in `PostgresIntegrationSuite` (which I ran manually because Jenkins can't run it right now).

Author: Josh Rosen <joshrosen@databricks.com>

Closes #14796 from JoshRosen/postgres-jdbc-type-fixes.
2016-08-25 23:22:40 +02:00
Luciano Resende 67f025d90e [SPARK-17023][BUILD] Upgrade to Kafka 0.10.0.1 release
## What changes were proposed in this pull request?
Update Kafka streaming connector to use Kafka 0.10.0.1 release

## How was this patch tested?
Tested via Spark unit and integration tests

Author: Luciano Resende <lresende@apache.org>

Closes #14606 from lresende/kafka-upgrade.
2016-08-13 11:42:38 +01:00
Mariusz Strzelecki 29081b587f [SPARK-16950] [PYSPARK] fromOffsets parameter support in KafkaUtils.createDirectStream for python3
## What changes were proposed in this pull request?

Ability to use KafkaUtils.createDirectStream with starting offsets in python 3 by using java.lang.Number instead of Long during param mapping in scala helper. This allows py4j to pass Integer or Long to the map and resolves ClassCastException problems.

## How was this patch tested?

unit tests

jerryshao  - could you please look at this PR?

Author: Mariusz Strzelecki <mariusz.strzelecki@allegrogroup.com>

Closes #14540 from szczeles/kafka_pyspark.
2016-08-09 09:44:43 -07:00
Holden Karau 9216901d52 [SPARK-16779][TRIVIAL] Avoid using postfix operators where they do not add much and remove whitelisting
## What changes were proposed in this pull request?

Avoid using postfix operation for command execution in SQLQuerySuite where it wasn't whitelisted and audit existing whitelistings removing postfix operators from most places. Some notable places where postfix operation remains is in the XML parsing & time units (seconds, millis, etc.) where it arguably can improve readability.

## How was this patch tested?

Existing tests.

Author: Holden Karau <holden@us.ibm.com>

Closes #14407 from holdenk/SPARK-16779.
2016-08-08 15:54:03 -07:00
Ekasit Kijsipongse 1f96c97f23 [SPARK-13238][CORE] Add ganglia dmax parameter
The current ganglia reporter doesn't set metric expiration time (dmax). The metrics of all finished applications are indefinitely left displayed in ganglia web. The dmax parameter allows user to set the lifetime of the metrics. The default value is 0 for compatibility with previous versions.

Author: Ekasit Kijsipongse <ekasitk@gmail.com>

Closes #11127 from ekasitk/ganglia-dmax.
2016-08-05 13:07:52 -07:00
Yuming Wang 39a2b2ea74 [SPARK-16625][SQL] General data types to be mapped to Oracle
## What changes were proposed in this pull request?

Spark will convert **BooleanType** to **BIT(1)**, **LongType** to **BIGINT**, **ByteType**  to **BYTE** when saving DataFrame to Oracle, but Oracle does not support BIT, BIGINT and BYTE types.

This PR is convert following _Spark Types_ to _Oracle types_ refer to [Oracle Developer's Guide](https://docs.oracle.com/cd/E19501-01/819-3659/gcmaz/)

Spark Type | Oracle
----|----
BooleanType | NUMBER(1)
IntegerType | NUMBER(10)
LongType | NUMBER(19)
FloatType | NUMBER(19, 4)
DoubleType | NUMBER(19, 4)
ByteType | NUMBER(3)
ShortType | NUMBER(5)

## How was this patch tested?

Add new tests in [JDBCSuite.scala](22b0c2a422 (diff-dc4b58851b084b274df6fe6b189db84d)) and [OracleDialect.scala](22b0c2a422 (diff-5e0cadf526662f9281aa26315b3750ad))

Author: Yuming Wang <wgyumg@gmail.com>

Closes #14377 from wangyum/SPARK-16625.
2016-08-05 16:11:54 +01:00
hyukjinkwon f93ad4fe7c [SPARK-16776][STREAMING] Replace deprecated API in KafkaTestUtils for 0.10.0.
## What changes were proposed in this pull request?

This PR replaces the old Kafka API to 0.10.0 ones in `KafkaTestUtils`.

The change include:

 - `Producer` to `KafkaProducer`
 - Change configurations to equalvant ones. (I referred [here](http://kafka.apache.org/documentation.html#producerconfigs) for 0.10.0 and [here](http://kafka.apache.org/082/documentation.html#producerconfigs
) for old, 0.8.2).

This PR will remove the build warning as below:

```scala
[WARNING] .../spark/external/kafka-0-10/src/main/scala/org/apache/spark/streaming/kafka010/KafkaTestUtils.scala:71: class Producer in package producer is deprecated: This class has been deprecated and will be removed in a future release. Please use org.apache.kafka.clients.producer.KafkaProducer instead.
[WARNING]   private var producer: Producer[String, String] = _
[WARNING]                         ^
[WARNING] .../spark/external/kafka-0-10/src/main/scala/org/apache/spark/streaming/kafka010/KafkaTestUtils.scala:181: class Producer in package producer is deprecated: This class has been deprecated and will be removed in a future release. Please use org.apache.kafka.clients.producer.KafkaProducer instead.
[WARNING]     producer = new Producer[String, String](new ProducerConfig(producerConfiguration))
[WARNING]                    ^
[WARNING] .../spark/streaming/kafka010/KafkaTestUtils.scala:181: class ProducerConfig in package producer is deprecated: This class has been deprecated and will be removed in a future release. Please use org.apache.kafka.clients.producer.ProducerConfig instead.
[WARNING]     producer = new Producer[String, String](new ProducerConfig(producerConfiguration))
[WARNING]                                                 ^
[WARNING] .../spark/external/kafka-0-10/src/main/scala/org/apache/spark/streaming/kafka010/KafkaTestUtils.scala:182: class KeyedMessage in package producer is deprecated: This class has been deprecated and will be removed in a future release. Please use org.apache.kafka.clients.producer.ProducerRecord instead.
[WARNING]     producer.send(messages.map { new KeyedMessage[String, String](topic, _ ) }: _*)
[WARNING]                                      ^
[WARNING] four warnings found
[WARNING] warning: [options] bootstrap class path not set in conjunction with -source 1.7
[WARNING] 1 warning
```

## How was this patch tested?

Existing tests that use `KafkaTestUtils` should cover this.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #14416 from HyukjinKwon/SPARK-16776.
2016-08-01 06:56:52 -07:00
Tathagata Das 03c27435ae [TEST][STREAMING] Fix flaky Kafka rate controlling test
## What changes were proposed in this pull request?

The current test is incorrect, because
- The expected number of messages does not take into account that the topic has 2 partitions, and rate is set per partition.
- Also in some cases, the test ran out of data in Kafka while waiting for the right amount of data per batch.

The PR
- Reduces the number of partitions to 1
- Adds more data to Kafka
- Runs with 0.5 second so that batches are created slowly

## How was this patch tested?
Ran many times locally, going to run it many times in Jenkins

(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #14361 from tdas/kafka-rate-test-fix.
2016-07-26 00:41:46 -07:00
Xin Ren 21a6dd2aef [SPARK-16535][BUILD] In pom.xml, remove groupId which is redundant definition and inherited from the parent
https://issues.apache.org/jira/browse/SPARK-16535

## What changes were proposed in this pull request?

When I scan through the pom.xml of sub projects, I found this warning as below and attached screenshot
```
Definition of groupId is redundant, because it's inherited from the parent
```
![screen shot 2016-07-13 at 3 13 11 pm](https://cloud.githubusercontent.com/assets/3925641/16823121/744f893e-4916-11e6-8a52-042f83b9db4e.png)

I've tried to remove some of the lines with groupId definition, and the build on my local machine is still ok.
```
<groupId>org.apache.spark</groupId>
```
As I just find now `<maven.version>3.3.9</maven.version>` is being used in Spark 2.x, and Maven-3 supports versionless parent elements: Maven 3 will remove the need to specify the parent version in sub modules. THIS is great (in Maven 3.1).

ref: http://stackoverflow.com/questions/3157240/maven-3-worth-it/3166762#3166762

## How was this patch tested?

I've tested by re-building the project, and build succeeded.

Author: Xin Ren <iamshrek@126.com>

Closes #14189 from keypointt/SPARK-16535.
2016-07-19 11:59:46 +01:00
Reynold Xin ffcb6e055a [SPARK-16477] Bump master version to 2.1.0-SNAPSHOT
## What changes were proposed in this pull request?
After SPARK-16476 (committed earlier today as #14128), we can finally bump the version number.

## How was this patch tested?
N/A

Author: Reynold Xin <rxin@databricks.com>

Closes #14130 from rxin/SPARK-16477.
2016-07-11 09:42:56 -07:00
cody koeninger fd6e8f0e22 [SPARK-13569][STREAMING][KAFKA] pattern based topic subscription
## What changes were proposed in this pull request?
Allow for kafka topic subscriptions based on a regex pattern.

## How was this patch tested?
Unit tests, manual tests

Author: cody koeninger <cody@koeninger.org>

Closes #14026 from koeninger/SPARK-13569.
2016-07-08 17:47:58 -07:00
cody koeninger b8ebf63c1e [SPARK-16212][STREAMING][KAFKA] apply test tweaks from 0-10 to 0-8 as well
## What changes were proposed in this pull request?

Bring the kafka-0-8 subproject up to date with some test modifications from development on 0-10.

Main changes are
- eliminating waits on concurrent queue in favor of an assert on received results,
- atomics instead of volatile (although this probably doesn't matter)
- increasing uniqueness of topic names

## How was this patch tested?

Unit tests

Author: cody koeninger <cody@koeninger.org>

Closes #14073 from koeninger/kafka-0-8-test-direct-cleanup.
2016-07-06 16:21:41 -07:00
cody koeninger 1fca9da95d [SPARK-16212][STREAMING][KAFKA] use random port for embedded kafka
## What changes were proposed in this pull request?

Testing for 0.10 uncovered an issue with a fixed port number being used in KafkaTestUtils.  This is making a roughly equivalent fix for the 0.8 connector

## How was this patch tested?

Unit tests, manual tests

Author: cody koeninger <cody@koeninger.org>

Closes #14018 from koeninger/kafka-0-8-test-port.
2016-07-05 11:45:54 -07:00
cody koeninger fbfd0ab9d7 [SPARK-12177][STREAMING][KAFKA] limit api surface area
## What changes were proposed in this pull request?
This is an alternative to the refactoring proposed by https://github.com/apache/spark/pull/13996

## How was this patch tested?

unit tests
also tested under scala 2.10 via
mvn -Dscala-2.10

Author: cody koeninger <cody@koeninger.org>

Closes #13998 from koeninger/kafka-0-10-refactor.
2016-07-01 00:53:36 -07:00
cody koeninger c62263340e [SPARK-16212][STREAMING][KAFKA] code cleanup from review feedback
## What changes were proposed in this pull request?
code cleanup in kafka-0-8 to match suggested changes for kafka-0-10 branch

## How was this patch tested?
unit tests

Author: cody koeninger <cody@koeninger.org>

Closes #13908 from koeninger/kafka-0-8-cleanup.
2016-06-30 13:16:58 -07:00
Tathagata Das de8ab313e1 [SPARK-12177][TEST] Removed test to avoid compilation issue in scala 2.10
## What changes were proposed in this pull request?

The commented lines failed scala 2.10 build. This is because of change in behavior of case classes between 2.10 and 2.11. In scala 2.10, if companion object of a case class has explicitly defined apply(), then the implicit apply method is not generated. In scala 2.11 it is generated. Hence, the lines compile fine in 2.11 but not in 2.10.

This simply comments the tests to fix broken build. Correct solution is pending.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #13992 from tdas/SPARK-12177.
2016-06-30 18:06:04 +08:00
cody koeninger dedbceec1e [SPARK-12177][STREAMING][KAFKA] Update KafkaDStreams to new Kafka 0.10 Consumer API
## What changes were proposed in this pull request?

New Kafka consumer api for the released 0.10 version of Kafka

## How was this patch tested?

Unit tests, manual tests

Author: cody koeninger <cody@koeninger.org>

Closes #11863 from koeninger/kafka-0.9.
2016-06-29 23:21:03 -07:00
Sean Owen f51dfe616b [SPARK-15086][CORE][STREAMING] Deprecate old Java accumulator API
## What changes were proposed in this pull request?

- Deprecate old Java accumulator API; should use Scala now
- Update Java tests and examples
- Don't bother testing old accumulator API in Java 8 (too)
- (fix a misspelling too)

## How was this patch tested?

Jenkins tests

Author: Sean Owen <sowen@cloudera.com>

Closes #13606 from srowen/SPARK-15086.
2016-06-12 11:44:33 -07:00
Zheng RuiFeng fd8af39713 [MINOR] Fix Typos 'an -> a'
## What changes were proposed in this pull request?

`an -> a`

Use cmds like `find . -name '*.R' | xargs -i sh -c "grep -in ' an [^aeiou]' {} && echo {}"` to generate candidates, and review them one by one.

## How was this patch tested?
manual tests

Author: Zheng RuiFeng <ruifengz@foxmail.com>

Closes #13515 from zhengruifeng/an_a.
2016-06-06 09:35:47 +01:00
Marcelo Vanzin 57adb77e6b [SPARK-15451][BUILD] Use jdk7's rt.jar when available.
This helps with preventing jdk8-specific calls being checked in,
because PR builders are running the compiler with the wrong settings.

If the JAVA_7_HOME env variable is set, assume it points at
a jdk7 and use its rt.jar when invoking javac. For zinc, just run
it with jdk7, and disable it when building jdk8-specific code.

A big note for sbt usage: adding the bootstrap options forces sbt
to fork the compiler, and that disables incremental compilation.
That means that it's really not convenient to use for normal
development, but should be ok for automated builds.

Tested with JAVA_HOME=jdk8 and JAVA_7_HOME=jdk7:
- mvn + zinc
- mvn sans zinc
- sbt

Verified that in all cases, jdk8-specific library calls fail to
compile.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #13272 from vanzin/SPARK-15451.
2016-05-31 16:54:34 -07:00
Reynold Xin 73178c7556 [SPARK-15633][MINOR] Make package name for Java tests consistent
## What changes were proposed in this pull request?
This is a simple patch that makes package names for Java 8 test suites consistent. I moved everything to test.org.apache.spark to we can test package private APIs properly. Also added "java8" as the package name so we can easily run all the tests related to Java 8.

## How was this patch tested?
This is a test only change.

Author: Reynold Xin <rxin@databricks.com>

Closes #13364 from rxin/SPARK-15633.
2016-05-27 21:20:02 -07:00
Shixiong Zhu c9c1c0e54d [SPARK-15508][STREAMING][TESTS] Fix flaky test: JavaKafkaStreamSuite.testKafkaStream
## What changes were proposed in this pull request?

`JavaKafkaStreamSuite.testKafkaStream` assumes when `sent.size == result.size`, the contents of `sent` and `result` should be same. However, that's not true. The content of `result` may not be the final content.

This PR modified the test to always retry the assertions even if the contents of `sent` and `result` are not same.

Here is the failure in Jenkins: http://spark-tests.appspot.com/tests/org.apache.spark.streaming.kafka.JavaKafkaStreamSuite/testKafkaStream

## How was this patch tested?

Jenkins unit tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #13281 from zsxwing/flaky-kafka-test.
2016-05-24 22:01:40 -07:00
Sean Owen 122302cbf5 [SPARK-15290][BUILD] Move annotations, like @Since / @DeveloperApi, into spark-tags
## What changes were proposed in this pull request?

(See https://github.com/apache/spark/pull/12416 where most of this was already reviewed and committed; this is just the module structure and move part. This change does not move the annotations into test scope, which was the apparently problem last time.)

Rename `spark-test-tags` -> `spark-tags`; move common annotations like `Since` to `spark-tags`

## How was this patch tested?

Jenkins tests.

Author: Sean Owen <sowen@cloudera.com>

Closes #13074 from srowen/SPARK-15290.
2016-05-17 09:55:53 +01:00
Sean Owen f5576a052d [SPARK-12972][CORE] Update org.apache.httpcomponents.httpclient
## What changes were proposed in this pull request?

(Retry of https://github.com/apache/spark/pull/13049)

- update to httpclient 4.5 / httpcore 4.4
- remove some defunct exclusions
- manage httpmime version to match
- update selenium / httpunit to support 4.5 (possible now that Jetty 9 is used)

## How was this patch tested?

Jenkins tests. Also, locally running the same test command of one Jenkins profile that failed: `mvn -Phadoop-2.6 -Pyarn -Phive -Phive-thriftserver -Pkinesis-asl ...`

Author: Sean Owen <sowen@cloudera.com>

Closes #13117 from srowen/SPARK-12972.2.
2016-05-15 15:56:46 +01:00
Sean Owen 10a8389674 Revert "[SPARK-12972][CORE] Update org.apache.httpcomponents.httpclient"
This reverts commit c74a6c3f23.
2016-05-13 13:50:26 +01:00
Sean Owen c74a6c3f23 [SPARK-12972][CORE] Update org.apache.httpcomponents.httpclient
## What changes were proposed in this pull request?

- update httpcore/httpclient to latest
- centralize version management
- remove excludes that are no longer relevant according to SBT/Maven dep graphs
- also manage httpmime to match httpclient

## How was this patch tested?

Jenkins tests, plus review of dependency graphs from SBT/Maven, and review of test-dependencies.sh  output

Author: Sean Owen <sowen@cloudera.com>

Closes #13049 from srowen/SPARK-12972.
2016-05-13 09:00:50 +01:00
Brian O'Neill 81e3bfc16c [SPARK-14421] Upgrades protobuf dependency to 2.6.1 for the new version of KCL, and…
## What changes were proposed in this pull request?

When running with Kinesis Consumer Library (KCL), against a stream that contains aggregated data, the KCL needs access to protobuf to de-aggregate the records.   Without this patch, that results in the following error message:

```
   Caused by: java.lang.ClassNotFoundException: com.google.protobuf.ProtocolStringList
```

This PR upgrades the protobuf dependency within the kinesis-asl-assembly, and relocates that package (as not to conflict with Spark's use of 2.5.0), which fixes the above CNFE.

## How was this patch tested?

Used kinesis word count example against a stream containing aggregated data.

See: SPARK-14421

Author: Brian O'Neill <bone@alumni.brown.edu>

Closes #13054 from boneill42/protobuf-relocation-for-kcl.
2016-05-12 20:10:33 +01:00
cody koeninger 89e67d6667 [SPARK-15085][STREAMING][KAFKA] Rename streaming-kafka artifact
## What changes were proposed in this pull request?
Renaming the streaming-kafka artifact to include kafka version, in anticipation of needing a different artifact for later kafka versions

## How was this patch tested?
Unit tests

Author: cody koeninger <cody@koeninger.org>

Closes #12946 from koeninger/SPARK-15085.
2016-05-11 12:15:41 -07:00
Xin Ren 86475520f8 [SPARK-14936][BUILD][TESTS] FlumePollingStreamSuite is slow
https://issues.apache.org/jira/browse/SPARK-14936

## What changes were proposed in this pull request?

FlumePollingStreamSuite contains two tests which run for a minute each. This seems excessively slow and we should speed it up if possible.

In this PR, instead of creating `StreamingContext` directly from `conf`, here an underlying `SparkContext` is created before all and it is used to create  each`StreamingContext`.

Running time is reduced by avoiding multiple `SparkContext` creations and destroys.

## How was this patch tested?

Tested on my local machine running `testOnly *.FlumePollingStreamSuite`

Author: Xin Ren <iamshrek@126.com>

Closes #12845 from keypointt/SPARK-14936.
2016-05-10 15:12:47 -07:00
Shixiong Zhu 9533f5390a [SPARK-6005][TESTS] Fix flaky test: o.a.s.streaming.kafka.DirectKafkaStreamSuite.offset recovery
## What changes were proposed in this pull request?

Because this test extracts data from `DStream.generatedRDDs` before stopping, it may get data before checkpointing. Then after recovering from the checkpoint, `recoveredOffsetRanges` may contain something not in `offsetRangesBeforeStop`, which will fail the test. Adding `Thread.sleep(1000)` before `ssc.stop()` will reproduce this failure.

This PR just moves the logic of `offsetRangesBeforeStop` (also renamed to `offsetRangesAfterStop`) after `ssc.stop()` to fix the flaky test.

## How was this patch tested?

Jenkins unit tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #12903 from zsxwing/SPARK-6005.
2016-05-10 13:26:53 -07:00
Subhobrata Dey 89f73f6741 [SPARK-14642][SQL] import org.apache.spark.sql.expressions._ breaks udf under functions
## What changes were proposed in this pull request?

PR fixes the import issue which breaks udf functions.

The following code snippet throws an error

```
scala> import org.apache.spark.sql.functions._
import org.apache.spark.sql.functions._

scala> import org.apache.spark.sql.expressions._
import org.apache.spark.sql.expressions._

scala> udf((v: String) => v.stripSuffix("-abc"))
<console>:30: error: No TypeTag available for String
       udf((v: String) => v.stripSuffix("-abc"))
```

This PR resolves the issue.

## How was this patch tested?

patch tested with unit tests.

(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)

Author: Subhobrata Dey <sbcd90@gmail.com>

Closes #12458 from sbcd90/udfFuncBreak.
2016-05-10 12:32:56 -07:00
Luciano Resende a03c5e68ab [SPARK-14738][BUILD] Separate docker integration tests from main build
## What changes were proposed in this pull request?

Create a maven profile for executing the docker integration tests using maven
Remove docker integration tests from main sbt build
Update documentation on how to run docker integration tests from sbt

## How was this patch tested?

Manual test of the docker integration tests as in :
mvn -Pdocker-integration-tests -pl :spark-docker-integration-tests_2.11 compile test

## Other comments

Note that the the DB2 Docker Tests are still disabled as there is a kernel version issue on the AMPLab Jenkins slaves and we would need to get them on the right level before enabling those tests. They do run ok locally with the updates from PR #12348

Author: Luciano Resende <lresende@apache.org>

Closes #12508 from lresende/docker.
2016-05-06 12:25:45 +01:00
Luciano Resende 104430223e [SPARK-14589][SQL] Enhance DB2 JDBC Dialect docker tests
## What changes were proposed in this pull request?

Enhance the DB2 JDBC Dialect docker tests as they seemed to have had some issues on previous merge causing some tests to fail.

## How was this patch tested?

By running the integration tests locally.

Author: Luciano Resende <lresende@apache.org>

Closes #12348 from lresende/SPARK-14589.
2016-05-05 10:54:48 +01:00
mcheah b7fdc23ccc [SPARK-12154] Upgrade to Jersey 2
## What changes were proposed in this pull request?

Replace com.sun.jersey with org.glassfish.jersey. Changes to the Spark Web UI code were required to compile. The changes were relatively standard Jersey migration things.

## How was this patch tested?

I did a manual test for the standalone web APIs. Although I didn't test the functionality of the security filter itself, the code that changed non-trivially is how we actually register the filter. I attached a debugger to the Spark master and verified that the SecurityFilter code is indeed invoked upon hitting /api/v1/applications.

Author: mcheah <mcheah@palantir.com>

Closes #12715 from mccheah/feature/upgrade-jersey.
2016-05-05 10:51:03 +01:00
Yin Huai 9c7c42bc6a Revert "[SPARK-14613][ML] Add @Since into the matrix and vector classes in spark-mllib-local"
This reverts commit dae538a4d7.
2016-04-28 19:57:41 -07:00
Pravin Gadakh dae538a4d7 [SPARK-14613][ML] Add @Since into the matrix and vector classes in spark-mllib-local
## What changes were proposed in this pull request?

This PR adds `since` tag into the matrix and vector classes in spark-mllib-local.

## How was this patch tested?

Scala-style checks passed.

Author: Pravin Gadakh <prgadakh@in.ibm.com>

Closes #12416 from pravingadakh/SPARK-14613.
2016-04-28 15:59:18 -07:00
Dongjoon Hyun d34d650378 [SPARK-14868][BUILD] Enable NewLineAtEofChecker in checkstyle and fix lint-java errors
## What changes were proposed in this pull request?

Spark uses `NewLineAtEofChecker` rule in Scala by ScalaStyle. And, most Java code also comply with the rule. This PR aims to enforce the same rule `NewlineAtEndOfFile` by CheckStyle explicitly. Also, this fixes lint-java errors since SPARK-14465. The followings are the items.

- Adds a new line at the end of the files (19 files)
- Fixes 25 lint-java errors (12 RedundantModifier, 6 **ArrayTypeStyle**, 2 LineLength, 2 UnusedImports, 2 RegexpSingleline, 1 ModifierOrder)

## How was this patch tested?

After the Jenkins test succeeds, `dev/lint-java` should pass. (Currently, Jenkins dose not run lint-java.)
```bash
$ dev/lint-java
Using `mvn` from path: /usr/local/bin/mvn
Checkstyle checks passed.
```

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12632 from dongjoon-hyun/SPARK-14868.
2016-04-24 20:40:03 -07:00
Sean Owen 8bd05c9db2 [SPARK-8393][STREAMING] JavaStreamingContext#awaitTermination() throws non-declared InterruptedException
## What changes were proposed in this pull request?

`JavaStreamingContext.awaitTermination` methods should be declared as `throws[InterruptedException]` so that this exception can be handled in Java code. Note this is not just a doc change, but an API change, since now (in Java) the method has a checked exception to handle. All await-like methods in Java APIs behave this way, so seems worthwhile for 2.0.

## How was this patch tested?

Jenkins tests

Author: Sean Owen <sowen@cloudera.com>

Closes #12418 from srowen/SPARK-8393.
2016-04-21 11:03:16 +01:00
Josh Rosen 90933e2afa [HOTFIX] Ignore all Docker integration tests
The Docker integration tests are failing very often (https://spark-tests.appspot.com/failed-tests) so I think we should disable these suites for now until we have time to improve them.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #12549 from JoshRosen/ignore-all-docker-tests.
2016-04-20 20:30:43 -07:00
Luciano Resende 68450c8c6e [SPARK-14504][SQL] Enable Oracle docker tests
## What changes were proposed in this pull request?

Enable Oracle docker tests

## How was this patch tested?

Existing tests

Author: Luciano Resende <lresende@apache.org>

Closes #12270 from lresende/oracle.
2016-04-18 14:35:10 -07:00
hyukjinkwon 6fc3dc8839 [MINOR][SQL] Remove extra anonymous closure within functional transformations
## What changes were proposed in this pull request?

This PR removes extra anonymous closure within functional transformations.

For example,

```scala
.map(item => {
  ...
})
```

which can be just simply as below:

```scala
.map { item =>
  ...
}
```

## How was this patch tested?

Related unit tests and `sbt scalastyle`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #12382 from HyukjinKwon/minor-extra-closers.
2016-04-14 09:43:41 +01:00
Dongjoon Hyun b0f5497e95 [SPARK-14508][BUILD] Add a new ScalaStyle Rule OmitBracesInCase
## What changes were proposed in this pull request?

According to the [Spark Code Style Guide](https://cwiki.apache.org/confluence/display/SPARK/Spark+Code+Style+Guide) and [Scala Style Guide](http://docs.scala-lang.org/style/control-structures.html#curlybraces), we had better enforce the following rule.
  ```
  case: Always omit braces in case clauses.
  ```
This PR makes a new ScalaStyle rule, 'OmitBracesInCase', and enforces it to the code.

## How was this patch tested?

Pass the Jenkins tests (including Scala style checking)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12280 from dongjoon-hyun/SPARK-14508.
2016-04-12 00:43:28 -07:00
Luciano Resende 94de63053e [SPARK-10521][SQL] Utilize Docker for test DB2 JDBC Dialect support
Add integration tests based on docker to test DB2 JDBC dialect support

Author: Luciano Resende <lresende@apache.org>

Closes #9893 from lresende/SPARK-10521.
2016-04-11 16:40:45 -07:00
Dongjoon Hyun aea30a1a9b [SPARK-14465][BUILD] Checkstyle should check all Java files
## What changes were proposed in this pull request?

Currently, `checkstyle` is configured to check the files under `src/main/java`. However, Spark has Java files in `src/main/scala`, too. This PR fixes the following configuration in `pom.xml` and the unchecked-so-far violations on those files.
```xml
-<sourceDirectory>${basedir}/src/main/java</sourceDirectory>
+<sourceDirectories>${basedir}/src/main/java,${basedir}/src/main/scala</sourceDirectories>
```

## How was this patch tested?

After passing the Jenkins build and manually `dev/lint-java`. (Note that Jenkins does not run `lint-java`)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12242 from dongjoon-hyun/SPARK-14465.
2016-04-09 21:31:20 -07:00
Marcelo Vanzin 21d5ca128b [SPARK-14134][CORE] Change the package name used for shading classes.
The current package name uses a dash, which is a little weird but seemed
to work. That is, until a new test tried to mock a class that references
one of those shaded types, and then things started failing.

Most changes are just noise to fix the logging configs.

For reference, SPARK-8815 also raised this issue, although at the time it
did not cause any issues in Spark, so it was not addressed.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #11941 from vanzin/SPARK-14134.
2016-04-06 19:33:51 -07:00
Dongjoon Hyun d717ae1fd7 [SPARK-14444][BUILD] Add a new scalastyle NoScalaDoc to prevent ScalaDoc-style multiline comments
## What changes were proposed in this pull request?

According to the [Spark Code Style Guide](https://cwiki.apache.org/confluence/display/SPARK/Spark+Code+Style+Guide#SparkCodeStyleGuide-Indentation), this PR adds a new scalastyle rule to prevent the followings.
```
/** In Spark, we don't use the ScalaDoc style so this
  * is not correct.
  */
```

## How was this patch tested?

Pass the Jenkins tests (including `lint-scala`).

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12221 from dongjoon-hyun/SPARK-14444.
2016-04-06 16:02:55 -07:00
Eric Liang 7d29c72f64 [SPARK-14359] Unit tests for java 8 lambda syntax with typed aggregates
## What changes were proposed in this pull request?

Adds unit tests for java 8 lambda syntax with typed aggregates as a follow-up to #12168

## How was this patch tested?

Unit tests.

Author: Eric Liang <ekl@databricks.com>

Closes #12181 from ericl/sc-2794-2.
2016-04-05 21:22:20 -05:00
Dongjoon Hyun 3f749f7ed4 [SPARK-14355][BUILD] Fix typos in Exception/Testcase/Comments and static analysis results
## What changes were proposed in this pull request?

This PR contains the following 5 types of maintenance fix over 59 files (+94 lines, -93 lines).
- Fix typos(exception/log strings, testcase name, comments) in 44 lines.
- Fix lint-java errors (MaxLineLength) in 6 lines. (New codes after SPARK-14011)
- Use diamond operators in 40 lines. (New codes after SPARK-13702)
- Fix redundant semicolon in 5 lines.
- Rename class `InferSchemaSuite` to `CSVInferSchemaSuite` in CSVInferSchemaSuite.scala.

## How was this patch tested?

Manual and pass the Jenkins tests.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12139 from dongjoon-hyun/SPARK-14355.
2016-04-03 18:14:16 -07:00
Dongjoon Hyun 4a6e78abd9 [MINOR][DOCS] Use multi-line JavaDoc comments in Scala code.
## What changes were proposed in this pull request?

This PR aims to fix all Scala-Style multiline comments into Java-Style multiline comments in Scala codes.
(All comment-only changes over 77 files: +786 lines, −747 lines)

## How was this patch tested?

Manual.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12130 from dongjoon-hyun/use_multiine_javadoc_comments.
2016-04-02 17:50:40 -07:00
Josh Rosen a7af6cd2ea [SPARK-14281][TESTS] Fix java8-tests and simplify their build
This patch fixes a compilation / build break in Spark's `java8-tests` and refactors their POM to simplify the build. See individual commit messages for more details.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #12073 from JoshRosen/fix-java8-tests.
2016-03-31 13:52:59 -07:00
Shixiong Zhu 24587ce433 [SPARK-14073][STREAMING][TEST-MAVEN] Move flume back to Spark
## What changes were proposed in this pull request?

This PR moves flume back to Spark as per the discussion in the dev mail-list.

## How was this patch tested?

Existing Jenkins tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #11895 from zsxwing/move-flume-back.
2016-03-25 17:37:16 -07:00
proflin c35c60fa91 [SPARK-14028][STREAMING][KINESIS][TESTS] Remove deprecated methods; fix two other warnings
## What changes were proposed in this pull request?

- Removed two methods that has been deprecated since 1.4
- Fixed two other compilation warnings

## How was this patch tested?

existing test suits

Author: proflin <proflin.me@gmail.com>

Closes #11850 from lw-lin/streaming-kinesis-deprecates-warnings.
2016-03-21 08:02:06 +00:00
Dongjoon Hyun 20fd254101 [SPARK-14011][CORE][SQL] Enable LineLength Java checkstyle rule
## What changes were proposed in this pull request?

[Spark Coding Style Guide](https://cwiki.apache.org/confluence/display/SPARK/Spark+Code+Style+Guide) has 100-character limit on lines, but it's disabled for Java since 11/09/15. This PR enables **LineLength** checkstyle again. To help that, this also introduces **RedundantImport** and **RedundantModifier**, too. The following is the diff on `checkstyle.xml`.

```xml
-        <!-- TODO: 11/09/15 disabled - the lengths are currently > 100 in many places -->
-        <!--
         <module name="LineLength">
             <property name="max" value="100"/>
             <property name="ignorePattern" value="^package.*|^import.*|a href|href|http://|https://|ftp://"/>
         </module>
-        -->
         <module name="NoLineWrap"/>
         <module name="EmptyBlock">
             <property name="option" value="TEXT"/>
 -167,5 +164,7
         </module>
         <module name="CommentsIndentation"/>
         <module name="UnusedImports"/>
+        <module name="RedundantImport"/>
+        <module name="RedundantModifier"/>
```

## How was this patch tested?

Currently, `lint-java` is disabled in Jenkins. It needs a manual test.
After passing the Jenkins tests, `dev/lint-java` should passes locally.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #11831 from dongjoon-hyun/SPARK-14011.
2016-03-21 07:58:57 +00:00
Wenchen Fan 8ef3399aff [SPARK-13928] Move org.apache.spark.Logging into org.apache.spark.internal.Logging
## What changes were proposed in this pull request?

Logging was made private in Spark 2.0. If we move it, then users would be able to create a Logging trait themselves to avoid changing their own code.

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #11764 from cloud-fan/logger.
2016-03-17 19:23:38 +08:00
Shixiong Zhu 06dec37455 [SPARK-13843][STREAMING] Remove streaming-flume, streaming-mqtt, streaming-zeromq, streaming-akka, streaming-twitter to Spark packages
## What changes were proposed in this pull request?

Currently there are a few sub-projects, each for integrating with different external sources for Streaming.  Now that we have better ability to include external libraries (spark packages) and with Spark 2.0 coming up, we can move the following projects out of Spark to https://github.com/spark-packages

- streaming-flume
- streaming-akka
- streaming-mqtt
- streaming-zeromq
- streaming-twitter

They are just some ancillary packages and considering the overhead of maintenance, running tests and PR failures, it's better to maintain them out of Spark. In addition, these projects can have their different release cycles and we can release them faster.

I have already copied these projects to https://github.com/spark-packages

## How was this patch tested?

Jenkins tests

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #11672 from zsxwing/remove-external-pkg.
2016-03-14 16:56:04 -07:00
Josh Rosen 07cb323e7a [SPARK-13848][SPARK-5185] Update to Py4J 0.9.2 in order to fix classloading issue
This patch upgrades Py4J from 0.9.1 to 0.9.2 in order to include a patch which modifies Py4J to use the current thread's ContextClassLoader when performing reflection / class loading. This is necessary in order to fix [SPARK-5185](https://issues.apache.org/jira/browse/SPARK-5185), a longstanding issue affecting the use of `--jars` and `--packages` in PySpark.

In order to demonstrate that the fix works, I removed the workarounds which were added as part of [SPARK-6027](https://issues.apache.org/jira/browse/SPARK-6027) / #4779 and other patches.

Py4J diff: https://github.com/bartdag/py4j/compare/0.9.1...0.9.2

/cc zsxwing tdas davies brkyvz

Author: Josh Rosen <joshrosen@databricks.com>

Closes #11687 from JoshRosen/py4j-0.9.2.
2016-03-14 12:22:02 -07:00
Wilson Wu 31d069d4c2 [SPARK-13746][TESTS] stop using deprecated SynchronizedSet
trait SynchronizedSet in package mutable is deprecated

Author: Wilson Wu <wilson888888888@gmail.com>

Closes #11580 from wilson888888888/spark-synchronizedset.
2016-03-14 09:13:29 +00:00
Dongjoon Hyun acdf219703 [MINOR][DOCS] Fix more typos in comments/strings.
## What changes were proposed in this pull request?

This PR fixes 135 typos over 107 files:
* 121 typos in comments
* 11 typos in testcase name
* 3 typos in log messages

## How was this patch tested?

Manual.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #11689 from dongjoon-hyun/fix_more_typos.
2016-03-14 09:07:39 +00:00
Sean Owen 1840852841 [SPARK-13823][CORE][STREAMING][SQL] Always specify Charset in String <-> byte[] conversions (and remaining Coverity items)
## What changes were proposed in this pull request?

- Fixes calls to `new String(byte[])` or `String.getBytes()` that rely on platform default encoding, to use UTF-8
- Same for `InputStreamReader` and `OutputStreamWriter` constructors
- Standardizes on UTF-8 everywhere
- Standardizes specifying the encoding with `StandardCharsets.UTF-8`, not the Guava constant or "UTF-8" (which means handling `UnuspportedEncodingException`)
- (also addresses the other remaining Coverity scan issues, which are pretty trivial; these are separated into commit 1deecd8d9c )

## How was this patch tested?

Jenkins tests

Author: Sean Owen <sowen@cloudera.com>

Closes #11657 from srowen/SPARK-13823.
2016-03-13 21:03:49 -07:00
Sean Owen 256704c771 [SPARK-13595][BUILD] Move docker, extras modules into external
## What changes were proposed in this pull request?

Move `docker` dirs out of top level into `external/`; move `extras/*` into `external/`

## How was this patch tested?

This is tested with Jenkins tests.

Author: Sean Owen <sowen@cloudera.com>

Closes #11523 from srowen/SPARK-13595.
2016-03-09 18:27:44 +00:00
Jason White f19228eed8 [SPARK-12073][STREAMING] backpressure rate controller consumes events preferentially from lagg…
…ing partitions

I'm pretty sure this is the reason we couldn't easily recover from an unbalanced Kafka partition under heavy load when using backpressure.

`maxMessagesPerPartition` calculates an appropriate limit for the message rate from all partitions, and then divides by the number of partitions to determine how many messages to retrieve per partition. The problem with this approach is that when one partition is behind by millions of records (due to random Kafka issues), but the rate estimator calculates only 100k total messages can be retrieved, each partition (out of say 32) only retrieves max 100k/32=3125 messages.

This PR (still needing a test) determines a per-partition desired message count by using the current lag for each partition to preferentially weight the total message limit among the partitions. In this situation, if each partition gets 1k messages, but 1 partition starts 1M behind, then the total number of messages to retrieve is (32 * 1k + 1M) = 1032000 messages, of which the one partition needs 1001000. So, it gets (1001000 / 1032000) = 97% of the 100k messages, and the other 31 partitions share the remaining 3%.

Assuming all of 100k the messages are retrieved and processed within the batch window, the rate calculator will increase the number of messages to retrieve in the next batch, until it reaches a new stable point or the backlog is finished processed.

We're going to try deploying this internally at Shopify to see if this resolves our issue.

tdas koeninger holdenk

Author: Jason White <jason.white@shopify.com>

Closes #10089 from JasonMWhite/rate_controller_offsets.
2016-03-04 16:04:56 -08:00
Dongjoon Hyun b5f02d6743 [SPARK-13583][CORE][STREAMING] Remove unused imports and add checkstyle rule
## What changes were proposed in this pull request?

After SPARK-6990, `dev/lint-java` keeps Java code healthy and helps PR review by saving much time.
This issue aims remove unused imports from Java/Scala code and add `UnusedImports` checkstyle rule to help developers.

## How was this patch tested?
```
./dev/lint-java
./build/sbt compile
```

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #11438 from dongjoon-hyun/SPARK-13583.
2016-03-03 10:12:32 +00:00
Sean Owen e97fc7f176 [SPARK-13423][WIP][CORE][SQL][STREAMING] Static analysis fixes for 2.x
## What changes were proposed in this pull request?

Make some cross-cutting code improvements according to static analysis. These are individually up for discussion since they exist in separate commits that can be reverted. The changes are broadly:

- Inner class should be static
- Mismatched hashCode/equals
- Overflow in compareTo
- Unchecked warnings
- Misuse of assert, vs junit.assert
- get(a) + getOrElse(b) -> getOrElse(a,b)
- Array/String .size -> .length (occasionally, -> .isEmpty / .nonEmpty) to avoid implicit conversions
- Dead code
- tailrec
- exists(_ == ) -> contains find + nonEmpty -> exists filter + size -> count
- reduce(_+_) -> sum map + flatten -> map

The most controversial may be .size -> .length simply because of its size. It is intended to avoid implicits that might be expensive in some places.

## How was the this patch tested?

Existing Jenkins unit tests.

Author: Sean Owen <sowen@cloudera.com>

Closes #11292 from srowen/SPARK-13423.
2016-03-03 09:54:09 +00:00
Lin Zhao fb8bb04766 [SPARK-13069][STREAMING] Add "ask" style store() to ActorReciever
Introduces a "ask" style ```store``` in ```ActorReceiver``` as a way to allow actor receiver blocked by back pressure or maxRate.

Author: Lin Zhao <lin@exabeam.com>

Closes #11176 from lin-zhao/SPARK-13069.
2016-02-25 12:32:24 -08:00
Huaxin Gao 8f35d3eac9 [SPARK-13186][STREAMING] migrate away from SynchronizedMap
trait SynchronizedMap in package mutable is deprecated: Synchronization via traits is deprecated as it is inherently unreliable. Change to java.util.concurrent.ConcurrentHashMap instead.

Author: Huaxin Gao <huaxing@us.ibm.com>

Closes #11250 from huaxingao/spark__13186.
2016-02-22 09:44:32 +00:00
Holden Karau 159198eff6 [SPARK-13165][STREAMING] Replace deprecated synchronizedBuffer in streaming
Building with Scala 2.11 results in the warning trait SynchronizedBuffer in package mutable is deprecated: Synchronization via traits is deprecated as it is inherently unreliable. Consider java.util.concurrent.ConcurrentLinkedQueue as an alternative - we already use ConcurrentLinkedQueue elsewhere so lets replace it.

Some notes about how behaviour is different for reviewers:
The Seq from a SynchronizedBuffer that was implicitly converted would continue to receive updates - however when we do the same conversion explicitly on the ConcurrentLinkedQueue this isn't the case. Hence changing some of the (internal & test) APIs to pass an Iterable. toSeq is safe to use if there are no more updates.

Author: Holden Karau <holden@us.ibm.com>
Author: tedyu <yuzhihong@gmail.com>

Closes #11067 from holdenk/SPARK-13165-replace-deprecated-synchronizedBuffer-in-streaming.
2016-02-09 08:44:56 +00:00
cody koeninger 140ddef373 [SPARK-10963][STREAMING][KAFKA] make KafkaCluster public
Author: cody koeninger <cody@koeninger.org>

Closes #9007 from koeninger/SPARK-10963.
2016-02-07 12:52:00 +00:00
Josh Rosen 289373b28c [SPARK-6363][BUILD] Make Scala 2.11 the default Scala version
This patch changes Spark's build to make Scala 2.11 the default Scala version. To be clear, this does not mean that Spark will stop supporting Scala 2.10: users will still be able to compile Spark for Scala 2.10 by following the instructions on the "Building Spark" page; however, it does mean that Scala 2.11 will be the default Scala version used by our CI builds (including pull request builds).

The Scala 2.11 compiler is faster than 2.10, so I think we'll be able to look forward to a slight speedup in our CI builds (it looks like it's about 2X faster for the Maven compile-only builds, for instance).

After this patch is merged, I'll update Jenkins to add new compile-only jobs to ensure that Scala 2.10 compilation doesn't break.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #10608 from JoshRosen/SPARK-6363.
2016-01-30 00:20:28 -08:00
Shixiong Zhu d8fefab4d8 [HOTFIX][BUILD][TEST-MAVEN] Remove duplicate dependency
Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10868 from zsxwing/hotfix-akka-pom.
2016-01-22 12:33:18 -08:00
Shixiong Zhu b7d74a602f [SPARK-7799][SPARK-12786][STREAMING] Add "streaming-akka" project
Include the following changes:

1. Add "streaming-akka" project and org.apache.spark.streaming.akka.AkkaUtils for creating an actorStream
2. Remove "StreamingContext.actorStream" and "JavaStreamingContext.actorStream"
3. Update the ActorWordCount example and add the JavaActorWordCount example
4. Make "streaming-zeromq" depend on "streaming-akka" and update the codes accordingly

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10744 from zsxwing/streaming-akka-2.
2016-01-20 13:55:41 -08:00
Kousuke Saruta 39ae04e6b7 [SPARK-12692][BUILD][STREAMING] Scala style: Fix the style violation (Space before "," or ":")
Fix the style violation (space before , and :).
This PR is a followup for #10643.

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #10685 from sarutak/SPARK-12692-followup-streaming.
2016-01-11 21:06:22 -08:00
Jacek Laskowski b313badaa0 [STREAMING][MINOR] Typo fixes
Author: Jacek Laskowski <jacek@japila.pl>

Closes #10698 from jaceklaskowski/streaming-kafka-typo-fixes.
2016-01-11 11:29:15 -08:00
Josh Rosen 090d691323 [SPARK-4628][BUILD] Remove all non-Maven-Central repositories from build
This patch removes all non-Maven-central repositories from Spark's build, thereby avoiding any risk of future build-breaks due to us accidentally depending on an artifact which is not present in an immutable public Maven repository.

I tested this by running

```
build/mvn \
        -Phive \
        -Phive-thriftserver \
        -Pkinesis-asl \
        -Pspark-ganglia-lgpl \
        -Pyarn \
        dependency:go-offline
```

inside of a fresh Ubuntu Docker container with no Ivy or Maven caches (I did a similar test for SBT).

Author: Josh Rosen <joshrosen@databricks.com>

Closes #10659 from JoshRosen/SPARK-4628.
2016-01-08 20:58:53 -08:00
Sean Owen b9c8353378 [SPARK-12618][CORE][STREAMING][SQL] Clean up build warnings: 2.0.0 edition
Fix most build warnings: mostly deprecated API usages. I'll annotate some of the changes below. CC rxin who is leading the charge to remove the deprecated APIs.

Author: Sean Owen <sowen@cloudera.com>

Closes #10570 from srowen/SPARK-12618.
2016-01-08 17:47:44 +00:00
Shixiong Zhu c0c397509b [SPARK-12510][STREAMING] Refactor ActorReceiver to support Java
This PR includes the following changes:

1. Rename `ActorReceiver` to `ActorReceiverSupervisor`
2. Remove `ActorHelper`
3. Add a new `ActorReceiver` for Scala and `JavaActorReceiver` for Java
4. Add `JavaActorWordCount` example

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10457 from zsxwing/java-actor-stream.
2016-01-07 15:26:55 -08:00
Marcelo Vanzin b3ba1be3b7 [SPARK-3873][TESTS] Import ordering fixes.
Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #10582 from vanzin/SPARK-3873-tests.
2016-01-05 19:07:39 -08:00
Marcelo Vanzin efb10cc9ad [SPARK-3873][STREAMING] Import order fixes for streaming.
Also included a few miscelaneous other modules that had very few violations.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #10532 from vanzin/SPARK-3873-streaming.
2015-12-31 01:34:13 -08:00
Reynold Xin f496031bd2 Bump master version to 2.0.0-SNAPSHOT.
Author: Reynold Xin <rxin@databricks.com>

Closes #10387 from rxin/version-bump.
2015-12-19 15:13:05 -08:00
cody koeninger 48a9804b2a [SPARK-12103][STREAMING][KAFKA][DOC] document that K means Key and V …
…means Value

Author: cody koeninger <cody@koeninger.org>

Closes #10132 from koeninger/SPARK-12103.
2015-12-08 11:02:35 +00:00
Shixiong Zhu 3af53e61fd [SPARK-12084][CORE] Fix codes that uses ByteBuffer.array incorrectly
`ByteBuffer` doesn't guarantee all contents in `ByteBuffer.array` are valid. E.g, a ByteBuffer returned by `ByteBuffer.slice`. We should not use the whole content of `ByteBuffer` unless we know that's correct.

This patch fixed all places that use `ByteBuffer.array` incorrectly.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #10083 from zsxwing/bytebuffer-array.
2015-12-04 17:02:04 -08:00
Josh Rosen b7204e1d41 [SPARK-12112][BUILD] Upgrade to SBT 0.13.9
We should upgrade to SBT 0.13.9, since this is a requirement in order to use SBT's new Maven-style resolution features (which will be done in a separate patch, because it's blocked by some binary compatibility issues in the POM reader plugin).

I also upgraded Scalastyle to version 0.8.0, which was necessary in order to fix a Scala 2.10.5 compatibility issue (see https://github.com/scalastyle/scalastyle/issues/156). The newer Scalastyle is slightly stricter about whitespace surrounding tokens, so I fixed the new style violations.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #10112 from JoshRosen/upgrade-to-sbt-0.13.9.
2015-12-05 08:15:30 +08:00
microwishing 95b3cf125b [DOCUMENTATION][KAFKA] fix typo in kafka/OffsetRange.scala
this is to fix some typo in external/kafka/src/main/scala/org/apache/spark/streaming/kafka/OffsetRange.scala

Author: microwishing <wei.zhu@kaiyuandao.com>

Closes #10121 from microwishing/master.
2015-12-03 16:09:05 +00:00
Prashant Sharma bf0e85a70a [SPARK-12023][BUILD] Fix warnings while packaging spark with maven.
this is a trivial fix, discussed [here](http://stackoverflow.com/questions/28500401/maven-assembly-plugin-warning-the-assembly-descriptor-contains-a-filesystem-roo/).

Author: Prashant Sharma <scrapcodes@gmail.com>

Closes #10014 from ScrapCodes/assembly-warning.
2015-11-30 10:11:27 +00:00
jerryshao 75a2922910 [SPARK-9065][STREAMING][PYSPARK] Add MessageHandler for Kafka Python API
Fixed the merge conflicts in #7410

Closes #7410

Author: Shixiong Zhu <shixiong@databricks.com>
Author: jerryshao <saisai.shao@intel.com>
Author: jerryshao <sshao@hortonworks.com>

Closes #9742 from zsxwing/pr7410.
2015-11-17 16:57:52 -08:00
Shixiong Zhu 3720b1480c [SPARK-11790][STREAMING][TESTS] Increase the connection timeout
Sometimes, EmbeddedZookeeper may need more than 6 seconds to setup up in a slow Jenkins worker. So just increase the timeout, it won't increase the test time if the test passes.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9778 from zsxwing/SPARK-11790.
2015-11-17 15:47:39 -08:00
Shixiong Zhu ec80c0c2fc [SPARK-11706][STREAMING] Fix the bug that Streaming Python tests cannot report failures
This PR just checks the test results and returns 1 if the test fails, so that `run-tests.py` can mark it fail.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #9669 from zsxwing/streaming-python-tests.
2015-11-13 00:30:27 -08:00
Tathagata Das 6600786ddd [SPARK-11361][STREAMING] Show scopes of RDD operations inside DStream.foreachRDD and DStream.transform in DAG viz
Currently, when a DStream sets the scope for RDD generated by it, that scope is not allowed to be overridden by the RDD operations. So in case of `DStream.foreachRDD`, all the RDDs generated inside the foreachRDD get the same scope - `foreachRDD  <time>`, as set by the `ForeachDStream`. So it is hard to debug generated RDDs in the RDD DAG viz in the Spark UI.

This patch allows the RDD operations inside `DStream.transform` and `DStream.foreachRDD` to append their own scopes to the earlier DStream scope.

I have also slightly tweaked how callsites are set such that the short callsite reflects the RDD operation name and line number. This tweak is necessary as callsites are not managed through scopes (which support nesting and overriding) and I didnt want to add another local property to control nesting and overriding of callsites.

## Before:
![image](https://cloud.githubusercontent.com/assets/663212/10808548/fa71c0c4-7da9-11e5-9af0-5737793a146f.png)

## After:
![image](https://cloud.githubusercontent.com/assets/663212/10808659/37bc45b6-7dab-11e5-8041-c20be6a9bc26.png)

The code that was used to generate this is:
```
    val lines = ssc.socketTextStream(args(0), args(1).toInt, StorageLevel.MEMORY_AND_DISK_SER)
    val words = lines.flatMap(_.split(" "))
    val wordCounts = words.map(x => (x, 1)).reduceByKey(_ + _)
    wordCounts.foreachRDD { rdd =>
      val temp = rdd.map { _ -> 1 }.reduceByKey( _ + _)
      val temp2 = temp.map { _ -> 1}.reduceByKey(_ + _)
      val count = temp2.count
      println(count)
    }
```

Note
- The inner scopes of the RDD operations map/reduceByKey inside foreachRDD is visible
- The short callsites of stages refers to the line number of the RDD ops rather than the same line number of foreachRDD in all three cases.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #9315 from tdas/SPARK-11361.
2015-11-10 16:54:06 -08:00
dima e5bc8c2757 [SPARK-11245] update twitter4j to 4.0.4 version
update twitter4j to 4.0.4 version
https://issues.apache.org/jira/browse/SPARK-11245

Author: dima <pronix.service@gmail.com>

Closes #9221 from pronix/twitter4j_update.
2015-10-24 18:16:45 +01:00
Hari Shreedharan fa3e4d8f52 [SPARK-11019] [STREAMING] [FLUME] Gracefully shutdown Flume receiver th…
…reads.

Wait for a minute for the receiver threads to shutdown before interrupting them.

Author: Hari Shreedharan <hshreedharan@apache.org>

Closes #9041 from harishreedharan/flume-graceful-shutdown.
2015-10-08 18:50:27 -07:00
Marcelo Vanzin 94fc57afdf [SPARK-10300] [BUILD] [TESTS] Add support for test tags in run-tests.py.
Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #8775 from vanzin/SPARK-10300.
2015-10-07 14:11:21 -07:00
Marcelo Vanzin b42059d2ef Revert "[SPARK-10300] [BUILD] [TESTS] Add support for test tags in run-tests.py."
This reverts commit 8abef21dac.
2015-09-15 13:03:38 -07:00
Marcelo Vanzin 8abef21dac [SPARK-10300] [BUILD] [TESTS] Add support for test tags in run-tests.py.
This change does two things:

- tag a few tests and adds the mechanism in the build to be able to disable those tags,
  both in maven and sbt, for both junit and scalatest suites.
- add some logic to run-tests.py to disable some tags depending on what files have
  changed; that's used to disable expensive tests when a module hasn't explicitly
  been changed, to speed up testing for changes that don't directly affect those
  modules.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #8437 from vanzin/test-tags.
2015-09-15 10:45:02 -07:00
Reynold Xin 09b7e7c198 Update version to 1.6.0-SNAPSHOT.
Author: Reynold Xin <rxin@databricks.com>

Closes #8350 from rxin/1.6.
2015-09-15 00:54:20 -07:00
Sean Owen 22730ad54d [SPARK-10547] [TEST] Streamline / improve style of Java API tests
Fix a few Java API test style issues: unused generic types, exceptions, wrong assert argument order

Author: Sean Owen <sowen@cloudera.com>

Closes #8706 from srowen/SPARK-10547.
2015-09-12 10:40:10 +01:00
Luc Bourlier c1bc4f439f [SPARK-10227] fatal warnings with sbt on Scala 2.11
The bulk of the changes are on `transient` annotation on class parameter. Often the compiler doesn't generate a field for this parameters, so the the transient annotation would be unnecessary.
But if the class parameter are used in methods, then fields are created. So it is safer to keep the annotations.

The remainder are some potential bugs, and deprecated syntax.

Author: Luc Bourlier <luc.bourlier@typesafe.com>

Closes #8433 from skyluc/issue/sbt-2.11.
2015-09-09 09:57:58 +01:00
Sean Owen 69c9c17716 [SPARK-9613] [CORE] Ban use of JavaConversions and migrate all existing uses to JavaConverters
Replace `JavaConversions` implicits with `JavaConverters`

Most occurrences I've seen so far are necessary conversions; a few have been avoidable. None are in critical code as far as I see, yet.

Author: Sean Owen <sowen@cloudera.com>

Closes #8033 from srowen/SPARK-9613.
2015-08-25 12:33:13 +01:00
cody koeninger d9c25dec87 [SPARK-9786] [STREAMING] [KAFKA] fix backpressure so it works with defa…
…ult maxRatePerPartition setting of 0

Author: cody koeninger <cody@koeninger.org>

Closes #8413 from koeninger/backpressure-testing-master.
2015-08-24 23:26:14 -07:00
Tathagata Das 7478c8b66d [SPARK-9791] [PACKAGE] Change private class to private class to prevent unnecessary classes from showing up in the docs
In addition, some random cleanup of import ordering

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #8387 from tdas/SPARK-9791 and squashes the following commits:

67f3ee9 [Tathagata Das] Change private class to private[package] class to prevent them from showing up in the docs
2015-08-24 12:40:09 -07:00
zsxwing 4e0395ddb7 [SPARK-10168] [STREAMING] Fix the issue that maven publishes wrong artifact jars
This PR removed the `outputFile` configuration from pom.xml and updated `tests.py` to search jars for both sbt build and maven build.

I ran ` mvn -Pkinesis-asl -DskipTests clean install` locally, and verified the jars in my local repository were correct. I also checked Python tests for maven build, and it passed all tests.

Author: zsxwing <zsxwing@gmail.com>

Closes #8373 from zsxwing/SPARK-10168 and squashes the following commits:

e0b5818 [zsxwing] Fix the sbt build
c697627 [zsxwing] Add the jar pathes to the exception message
be1d8a5 [zsxwing] Fix the issue that maven publishes wrong artifact jars
2015-08-24 12:38:01 -07:00
zsxwing bf1d6614dc [SPARK-9574] [STREAMING] Remove unnecessary contents of spark-streaming-XXX-assembly jars
Removed contents already included in Spark assembly jar from spark-streaming-XXX-assembly jars.

Author: zsxwing <zsxwing@gmail.com>

Closes #8069 from zsxwing/SPARK-9574.
2015-08-18 13:35:45 -07:00
cody koeninger 8ce60963cb [SPARK-9780] [STREAMING] [KAFKA] prevent NPE if KafkaRDD instantiation …
…fails

Author: cody koeninger <cody@koeninger.org>

Closes #8133 from koeninger/SPARK-9780 and squashes the following commits:

406259d [cody koeninger] [SPARK-9780][Streaming][Kafka] prevent NPE if KafkaRDD instantiation fails
2015-08-12 17:44:16 -07:00
Prabeesh K 853809e948 [SPARK-5155] [PYSPARK] [STREAMING] Mqtt streaming support in Python
This PR is based on #4229, thanks prabeesh.

Closes #4229

Author: Prabeesh K <prabsmails@gmail.com>
Author: zsxwing <zsxwing@gmail.com>
Author: prabs <prabsmails@gmail.com>
Author: Prabeesh K <prabeesh.k@namshi.com>

Closes #7833 from zsxwing/pr4229 and squashes the following commits:

9570bec [zsxwing] Fix the variable name and check null in finally
4a9c79e [zsxwing] Fix pom.xml indentation
abf5f18 [zsxwing] Merge branch 'master' into pr4229
935615c [zsxwing] Fix the flaky MQTT tests
47278c5 [zsxwing] Include the project class files
478f844 [zsxwing] Add unpack
5f8a1d4 [zsxwing] Make the maven build generate the test jar for Python MQTT tests
734db99 [zsxwing] Merge branch 'master' into pr4229
126608a [Prabeesh K] address the comments
b90b709 [Prabeesh K] Merge pull request #1 from zsxwing/pr4229
d07f454 [zsxwing] Register StreamingListerner before starting StreamingContext; Revert unncessary changes; fix the python unit test
a6747cb [Prabeesh K] wait for starting the receiver before publishing data
87fc677 [Prabeesh K] address the comments:
97244ec [zsxwing] Make sbt build the assembly test jar for streaming mqtt
80474d1 [Prabeesh K] fix
1f0cfe9 [Prabeesh K] python style fix
e1ee016 [Prabeesh K] scala style fix
a5a8f9f [Prabeesh K] added Python test
9767d82 [Prabeesh K] implemented Python-friendly class
a11968b [Prabeesh K] fixed python style
795ec27 [Prabeesh K] address comments
ee387ae [Prabeesh K] Fix assembly jar location of mqtt-assembly
3f4df12 [Prabeesh K] updated version
b34c3c1 [prabs] adress comments
3aa7fff [prabs] Added Python streaming mqtt word count example
b7d42ff [prabs] Mqtt streaming support in Python
2015-08-10 16:33:23 -07:00
cody koeninger 1723e34893 [DOCS] [STREAMING] make the existing parameter docs for OffsetRange ac…
…tually visible

Author: cody koeninger <cody@koeninger.org>

Closes #7995 from koeninger/doc-fixes and squashes the following commits:

87af9ea [cody koeninger] [Docs][Streaming] make the existing parameter docs for OffsetRange actually visible
2015-08-06 14:37:25 -07:00
Tathagata Das 0a078303d0 [SPARK-9556] [SPARK-9619] [SPARK-9624] [STREAMING] Make BlockGenerator more robust and make all BlockGenerators subscribe to rate limit updates
In some receivers, instead of using the default `BlockGenerator` in `ReceiverSupervisorImpl`, custom generator with their custom listeners are used for reliability (see [`ReliableKafkaReceiver`](https://github.com/apache/spark/blob/master/external/kafka/src/main/scala/org/apache/spark/streaming/kafka/ReliableKafkaReceiver.scala#L99) and [updated `KinesisReceiver`](https://github.com/apache/spark/pull/7825/files)). These custom generators do not receive rate updates. This PR modifies the code to allow custom `BlockGenerator`s to be created through the `ReceiverSupervisorImpl` so that they can be kept track and rate updates can be applied.

In the process, I did some simplification, and de-flaki-fication of some rate controller related tests. In particular.
- Renamed `Receiver.executor` to `Receiver.supervisor` (to match `ReceiverSupervisor`)
- Made `RateControllerSuite` faster (by increasing batch interval) and less flaky
- Changed a few internal API to return the current rate of block generators as Long instead of Option\[Long\] (was inconsistent at places).
- Updated existing `ReceiverTrackerSuite` to test that custom block generators get rate updates as well.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #7913 from tdas/SPARK-9556 and squashes the following commits:

41d4461 [Tathagata Das] fix scala style
eb9fd59 [Tathagata Das] Updated kinesis receiver
d24994d [Tathagata Das] Updated BlockGeneratorSuite to use manual clock in BlockGenerator
d70608b [Tathagata Das] Updated BlockGenerator with states and proper synchronization
f6bd47e [Tathagata Das] Merge remote-tracking branch 'apache-github/master' into SPARK-9556
31da173 [Tathagata Das] Fix bug
12116df [Tathagata Das] Add BlockGeneratorSuite
74bd069 [Tathagata Das] Fix style
989bb5c [Tathagata Das] Made BlockGenerator fail is used after stop, and added better unit tests for it
3ff618c [Tathagata Das] Fix test
b40eff8 [Tathagata Das] slight refactoring
f0df0f1 [Tathagata Das] Scala style fixes
51759cb [Tathagata Das] Refactored rate controller tests and added the ability to update rate of any custom block generator
2015-08-06 14:35:30 -07:00
Nilanjan Raychaudhuri a1bbf1bc5c [SPARK-8978] [STREAMING] Implements the DirectKafkaRateController
Author: Dean Wampler <dean@concurrentthought.com>
Author: Nilanjan Raychaudhuri <nraychaudhuri@gmail.com>
Author: François Garillot <francois@garillot.net>

Closes #7796 from dragos/topic/streaming-bp/kafka-direct and squashes the following commits:

50d1f21 [Nilanjan Raychaudhuri] Taking care of the remaining nits
648c8b1 [Dean Wampler] Refactored rate controller test to be more predictable and run faster.
e43f678 [Nilanjan Raychaudhuri] fixing doc and nits
ce19d2a [Dean Wampler] Removing an unreliable assertion.
9615320 [Dean Wampler] Give me a break...
6372478 [Dean Wampler] Found a few ways to make this test more robust...
9e69e37 [Dean Wampler] Attempt to fix flakey test that fails in CI, but not locally :(
d3db1ea [Dean Wampler] Fixing stylecheck errors.
d04a288 [Nilanjan Raychaudhuri] adding test to make sure rate controller is used to calculate maxMessagesPerPartition
b6ecb67 [Nilanjan Raychaudhuri] Fixed styling issue
3110267 [Nilanjan Raychaudhuri] [SPARK-8978][Streaming] Implements the DirectKafkaRateController
393c580 [François Garillot] [SPARK-8978][Streaming] Implements the DirectKafkaRateController
51e78c6 [Nilanjan Raychaudhuri] Rename and fix build failure
2795509 [Nilanjan Raychaudhuri] Added missing RateController
19200f5 [Dean Wampler] Removed usage of infix notation. Changed a private variable name to be more consistent with usage.
aa4a70b [François Garillot] [SPARK-8978][Streaming] Implements the DirectKafkaController
2015-08-06 12:50:08 -07:00
Sean Owen 76d74090d6 [SPARK-9534] [BUILD] Enable javac lint for scalac parity; fix a lot of build warnings, 1.5.0 edition
Enable most javac lint warnings; fix a lot of build warnings. In a few cases, touch up surrounding code in the process.

I'll explain several of the changes inline in comments.

Author: Sean Owen <sowen@cloudera.com>

Closes #7862 from srowen/SPARK-9534 and squashes the following commits:

ea51618 [Sean Owen] Enable most javac lint warnings; fix a lot of build warnings. In a few cases, touch up surrounding code in the process.
2015-08-04 12:02:26 +01:00
Josh Rosen b217230f2a [SPARK-9144] Remove DAGScheduler.runLocallyWithinThread and spark.localExecution.enabled
Spark has an option called spark.localExecution.enabled; according to the docs:

> Enables Spark to run certain jobs, such as first() or take() on the driver, without sending tasks to the cluster. This can make certain jobs execute very quickly, but may require shipping a whole partition of data to the driver.

This feature ends up adding quite a bit of complexity to DAGScheduler, especially in the runLocallyWithinThread method, but as far as I know nobody uses this feature (I searched the mailing list and haven't seen any recent mentions of the configuration nor stacktraces including the runLocally method). As a step towards scheduler complexity reduction, I propose that we remove this feature and all code related to it for Spark 1.5.

This pull request simply brings #7484 up to date.

Author: Josh Rosen <joshrosen@databricks.com>
Author: Reynold Xin <rxin@databricks.com>

Closes #7585 from rxin/remove-local-exec and squashes the following commits:

84bd10e [Reynold Xin] Python fix.
1d9739a [Reynold Xin] Merge pull request #7484 from JoshRosen/remove-localexecution
eec39fa [Josh Rosen] Remove allowLocal(); deprecate user-facing uses of it.
b0835dc [Josh Rosen] Remove local execution code in DAGScheduler
8975d96 [Josh Rosen] Remove local execution tests.
ffa8c9b [Josh Rosen] Remove documentation for configuration
2015-07-22 21:04:04 -07:00
Josh Rosen 11e5c37286 [SPARK-8962] Add Scalastyle rule to ban direct use of Class.forName; fix existing uses
This pull request adds a Scalastyle regex rule which fails the style check if `Class.forName` is used directly.  `Class.forName` always loads classes from the default / system classloader, but in a majority of cases, we should be using Spark's own `Utils.classForName` instead, which tries to load classes from the current thread's context classloader and falls back to the classloader which loaded Spark when the context classloader is not defined.

<!-- Reviewable:start -->
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Author: Josh Rosen <joshrosen@databricks.com>

Closes #7350 from JoshRosen/ban-Class.forName and squashes the following commits:

e3e96f7 [Josh Rosen] Merge remote-tracking branch 'origin/master' into ban-Class.forName
c0b7885 [Josh Rosen] Hopefully fix the last two cases
d707ba7 [Josh Rosen] Fix uses of Class.forName that I missed in my first cleanup pass
046470d [Josh Rosen] Merge remote-tracking branch 'origin/master' into ban-Class.forName
62882ee [Josh Rosen] Fix uses of Class.forName or add exclusion.
d9abade [Josh Rosen] Add stylechecker rule to ban uses of Class.forName
2015-07-14 16:08:17 -07:00
Jonathan Alter e14b545d2d [SPARK-7977] [BUILD] Disallowing println
Author: Jonathan Alter <jonalter@users.noreply.github.com>

Closes #7093 from jonalter/SPARK-7977 and squashes the following commits:

ccd44cc [Jonathan Alter] Changed println to log in ThreadingSuite
7fcac3e [Jonathan Alter] Reverting to println in ThreadingSuite
10724b6 [Jonathan Alter] Changing some printlns to logs in tests
eeec1e7 [Jonathan Alter] Merge branch 'master' of github.com:apache/spark into SPARK-7977
0b1dcb4 [Jonathan Alter] More println cleanup
aedaf80 [Jonathan Alter] Merge branch 'master' of github.com:apache/spark into SPARK-7977
925fd98 [Jonathan Alter] Merge branch 'master' of github.com:apache/spark into SPARK-7977
0c16fa3 [Jonathan Alter] Replacing some printlns with logs
45c7e05 [Jonathan Alter] Merge branch 'master' of github.com:apache/spark into SPARK-7977
5c8e283 [Jonathan Alter] Allowing println in audit-release examples
5b50da1 [Jonathan Alter] Allowing printlns in example files
ca4b477 [Jonathan Alter] Merge branch 'master' of github.com:apache/spark into SPARK-7977
83ab635 [Jonathan Alter] Fixing new printlns
54b131f [Jonathan Alter] Merge branch 'master' of github.com:apache/spark into SPARK-7977
1cd8a81 [Jonathan Alter] Removing some unnecessary comments and printlns
b837c3a [Jonathan Alter] Disallowing println
2015-07-10 11:34:01 +01:00
Marcelo Vanzin 0e78e40c0b [SPARK-8852] [FLUME] Trim dependencies in flume assembly.
Also, add support for the *-provided profiles. This avoids repackaging
things that are already in the Spark assembly, or, in the case of the
*-provided profiles, are provided by the distribution.

The flume-ng-auth dependency was also excluded since it's not really
used by Spark.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #7247 from vanzin/SPARK-8852 and squashes the following commits:

298a7d5 [Marcelo Vanzin] Feedback.
c962082 [Marcelo Vanzin] [SPARK-8852] [flume] Trim dependencies in flume assembly.
2015-07-09 18:23:06 -07:00
guowei2 897700369f [SPARK-8865] [STREAMING] FIX BUG: check key in kafka params
Author: guowei2 <guowei@growingio.com>

Closes #7254 from guowei2/spark-8865 and squashes the following commits:

48ca17a [guowei2] fix contains key
2015-07-09 15:01:53 -07:00
jerryshao 3ccebf36c5 [SPARK-8389] [STREAMING] [PYSPARK] Expose KafkaRDDs offsetRange in Python
This PR propose a simple way to expose OffsetRange in Python code, also the usage of offsetRanges is similar to Scala/Java way, here in Python we could get OffsetRange like:

```
dstream.foreachRDD(lambda r: KafkaUtils.offsetRanges(r))
```

Reason I didn't follow the way what SPARK-8389 suggested is that: Python Kafka API has one more step to decode the message compared to Scala/Java, Which makes Python API return a transformed RDD/DStream, not directly wrapped so-called JavaKafkaRDD, so it is hard to backtrack to the original RDD to get the offsetRange.

Author: jerryshao <saisai.shao@intel.com>

Closes #7185 from jerryshao/SPARK-8389 and squashes the following commits:

4c6d320 [jerryshao] Another way to fix subclass deserialization issue
e6a8011 [jerryshao] Address the comments
fd13937 [jerryshao] Fix serialization bug
7debf1c [jerryshao] bug fix
cff3893 [jerryshao] refactor the code according to the comments
2aabf9e [jerryshao] Style fix
848c708 [jerryshao] Add HasOffsetRanges for Python
2015-07-09 13:54:44 -07:00
zsxwing 1f6b0b1234 [SPARK-8701] [STREAMING] [WEBUI] Add input metadata in the batch page
This PR adds `metadata` to `InputInfo`. `InputDStream` can report its metadata for a batch and it will be shown in the batch page.

For example,

![screen shot](https://cloud.githubusercontent.com/assets/1000778/8403741/d6ffc7e2-1e79-11e5-9888-c78c1575123a.png)

FileInputDStream will display the new files for a batch, and DirectKafkaInputDStream will display its offset ranges.

Author: zsxwing <zsxwing@gmail.com>

Closes #7081 from zsxwing/input-metadata and squashes the following commits:

f7abd9b [zsxwing] Revert the space changes in project/MimaExcludes.scala
d906209 [zsxwing] Merge branch 'master' into input-metadata
74762da [zsxwing] Fix MiMa tests
7903e33 [zsxwing] Merge branch 'master' into input-metadata
450a46c [zsxwing] Address comments
1d94582 [zsxwing] Raname InputInfo to StreamInputInfo and change "metadata" to Map[String, Any]
d496ae9 [zsxwing] Add input metadata in the batch page
2015-07-09 13:48:29 -07:00
jerryshao 8a9d9cc156 [SPARK-7050] [BUILD] Fix Python Kafka test assembly jar not found issue under Maven build
To fix Spark Streaming unit test with maven build. Previously the name and path of maven generated jar is different from sbt, which will lead to following exception. This fix keep the same behavior with both Maven and sbt build.

```
Failed to find Spark Streaming Kafka assembly jar in /home/xyz/spark/external/kafka-assembly
You need to build Spark with  'build/sbt assembly/assembly streaming-kafka-assembly/assembly' or 'build/mvn package' before running this program
```

Author: jerryshao <saisai.shao@intel.com>

Closes #5632 from jerryshao/SPARK-7050 and squashes the following commits:

74b068d [jerryshao] Fix mvn build issue
2015-07-08 12:23:32 +01:00
zsxwing 75b9fe4c5f [SPARK-8378] [STREAMING] Add the Python API for Flume
Author: zsxwing <zsxwing@gmail.com>

Closes #6830 from zsxwing/flume-python and squashes the following commits:

78dfdac [zsxwing] Fix the compile error in the test code
f1bf3c0 [zsxwing] Address TD's comments
0449723 [zsxwing] Add sbt goal streaming-flume-assembly/assembly
e93736b [zsxwing] Fix the test case for determine_modules_to_test
9d5821e [zsxwing] Fix pyspark_core dependencies
f9ee681 [zsxwing] Merge branch 'master' into flume-python
7a55837 [zsxwing] Add streaming_flume_assembly to run-tests.py
b96b0de [zsxwing] Merge branch 'master' into flume-python
ce85e83 [zsxwing] Fix incompatible issues for Python 3
01cbb3d [zsxwing] Add import sys
152364c [zsxwing] Fix the issue that StringIO doesn't work in Python 3
14ba0ff [zsxwing] Add flume-assembly for sbt building
b8d5551 [zsxwing] Merge branch 'master' into flume-python
4762c34 [zsxwing] Fix the doc
0336579 [zsxwing] Refactor Flume unit tests and also add tests for Python API
9f33873 [zsxwing] Add the Python API for Flume
2015-07-01 11:59:24 -07:00
Hari Shreedharan 9b618fb0d2 [SPARK-8483] [STREAMING] Remove commons-lang3 dependency from Flume Si…
…nk. Also bump Flume version to 1.6.0

Author: Hari Shreedharan <hshreedharan@apache.org>

Closes #6910 from harishreedharan/remove-commons-lang3 and squashes the following commits:

9875f7d [Hari Shreedharan] Revert back to Flume 1.4.0
ca35eb0 [Hari Shreedharan] [SPARK-8483][Streaming] Remove commons-lang3 dependency from Flume Sink. Also bump Flume version to 1.6.0
2015-06-22 23:34:17 -07:00
cody koeninger 1b6fe9b1a7 [SPARK-8127] [STREAMING] [KAFKA] KafkaRDD optimize count() take() isEmpty()
…ed KafkaRDD methods.  Possible fix for [SPARK-7122], but probably a worthwhile optimization regardless.

Author: cody koeninger <cody@koeninger.org>

Closes #6632 from koeninger/kafka-rdd-count and squashes the following commits:

321340d [cody koeninger] [SPARK-8127][Streaming][Kafka] additional test of ordering of take()
5a05d0f [cody koeninger] [SPARK-8127][Streaming][Kafka] additional test of isEmpty
f68bd32 [cody koeninger] [Streaming][Kafka][SPARK-8127] code cleanup
9555b73 [cody koeninger] Merge branch 'master' into kafka-rdd-count
253031d [cody koeninger] [Streaming][Kafka][SPARK-8127] mima exclusion for change to private method
8974b9e [cody koeninger] [Streaming][Kafka][SPARK-8127] check offset ranges before constructing KafkaRDD
c3768c5 [cody koeninger] [Streaming][Kafka] Take advantage of offset range info for size-related KafkaRDD methods.  Possible fix for [SPARK-7122], but probably a worthwhile optimization regardless.
2015-06-19 18:54:07 -07:00
cody koeninger b305e377fb [SPARK-8390] [STREAMING] [KAFKA] fix docs related to HasOffsetRanges
Author: cody koeninger <cody@koeninger.org>

Closes #6863 from koeninger/SPARK-8390 and squashes the following commits:

26a06bd [cody koeninger] Merge branch 'master' into SPARK-8390
3744492 [cody koeninger] [Streaming][Kafka][SPARK-8390] doc changes per TD, test to make sure approach shown in docs actually compiles + runs
b108c9d [cody koeninger] [Streaming][Kafka][SPARK-8390] further doc fixes, clean up spacing
bb4336b [cody koeninger] [Streaming][Kafka][SPARK-8390] fix docs related to HasOffsetRanges, cleanup
3f3c57a [cody koeninger] [Streaming][Kafka][SPARK-8389] Example of getting offset ranges out of the existing java direct stream api
2015-06-19 17:18:31 -07:00
cody koeninger 47af7c1ebf [SPARK-8389] [STREAMING] [KAFKA] Example of getting offset ranges out o…
…f the existing java direct stream api

Author: cody koeninger <cody@koeninger.org>

Closes #6846 from koeninger/SPARK-8389 and squashes the following commits:

3f3c57a [cody koeninger] [Streaming][Kafka][SPARK-8389] Example of getting offset ranges out of the existing java direct stream api
2015-06-19 14:51:19 +02:00
zsxwing a06d9c8e76 [SPARK-8404] [STREAMING] [TESTS] Use thread-safe collections to make the tests more reliable
KafkaStreamSuite, DirectKafkaStreamSuite, JavaKafkaStreamSuite and JavaDirectKafkaStreamSuite use non-thread-safe collections to collect data in one thread and check it in another thread. It may fail the tests.

This PR changes them to thread-safe collections.

Note: I cannot reproduce the test failures in my environment. But at least, this PR should make the tests more reliable.

Author: zsxwing <zsxwing@gmail.com>

Closes #6852 from zsxwing/fix-KafkaStreamSuite and squashes the following commits:

d464211 [zsxwing] Use thread-safe collections to make the tests more reliable
2015-06-17 15:00:03 -07:00
cody koeninger b127ff8a0c [SPARK-2808] [STREAMING] [KAFKA] cleanup tests from
see if requiring producer acks eliminates the need for waitUntilLeaderOffset calls in tests

Author: cody koeninger <cody@koeninger.org>

Closes #5921 from koeninger/kafka-0.8.2-test-cleanup and squashes the following commits:

1e89dc8 [cody koeninger] Merge branch 'master' into kafka-0.8.2-test-cleanup
4662828 [cody koeninger] [Streaming][Kafka] filter mima issue for removal of method from private test class
af1e083 [cody koeninger] Merge branch 'master' into kafka-0.8.2-test-cleanup
4298ac2 [cody koeninger] [Streaming][Kafka] update comment to trigger jenkins attempt
1274afb [cody koeninger] [Streaming][Kafka] see if requiring producer acks eliminates the need for waitUntilLeaderOffset calls in tests
2015-06-07 21:42:45 +01:00
Patrick Wendell 2c4d550eda [SPARK-7801] [BUILD] Updating versions to SPARK 1.5.0
Author: Patrick Wendell <patrick@databricks.com>

Closes #6328 from pwendell/spark-1.5-update and squashes the following commits:

2f42d02 [Patrick Wendell] A few more excludes
4bebcf0 [Patrick Wendell] Update to RC4
61aaf46 [Patrick Wendell] Using new release candidate
55f1610 [Patrick Wendell] Another exclude
04b4f04 [Patrick Wendell] More issues with transient 1.4 changes
36f549b [Patrick Wendell] [SPARK-7801] [BUILD] Updating versions to SPARK 1.5.0
2015-06-03 10:11:27 -07:00
Marcelo Vanzin 0071bd8d31 [SPARK-8015] [FLUME] Remove Guava dependency from flume-sink.
The minimal change would be to disable shading of Guava in the module,
and rely on the transitive dependency from other libraries instead. But
since Guava's use is so localized, I think it's better to just not use
it instead, so I replaced that code and removed all traces of Guava from
the module's build.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #6555 from vanzin/SPARK-8015 and squashes the following commits:

c0ceea8 [Marcelo Vanzin] Add comments about dependency management.
c38228d [Marcelo Vanzin] Add guava dep in test scope.
b7a0349 [Marcelo Vanzin] Add libthrift exclusion.
6e0942d [Marcelo Vanzin] Add comment in pom.
2d79260 [Marcelo Vanzin] [SPARK-8015] [flume] Remove Guava dependency from flume-sink.
2015-06-02 11:20:33 -07:00
Reynold Xin 564bc11e98 [SPARK-3850] Trim trailing spaces for examples/streaming/yarn.
Author: Reynold Xin <rxin@databricks.com>

Closes #6530 from rxin/trim-whitespace-1 and squashes the following commits:

7b7b3a0 [Reynold Xin] Reset again.
dc14597 [Reynold Xin] Reset scalastyle.
cd556c4 [Reynold Xin] YARN, Kinesis, Flume.
4223fe1 [Reynold Xin] [SPARK-3850] Trim trailing spaces for examples/streaming.
2015-05-31 00:47:56 -07:00
Andrew Or 609c4923f9 [SPARK-7558] Guard against direct uses of FunSuite / FunSuiteLike
This is a follow-up patch to #6441.

Author: Andrew Or <andrew@databricks.com>

Closes #6510 from andrewor14/extends-funsuite-check and squashes the following commits:

6618b46 [Andrew Or] Exempt SparkSinkSuite from the FunSuite check
99d02ac [Andrew Or] Merge branch 'master' of github.com:apache/spark into extends-funsuite-check
48874dd [Andrew Or] Guard against direct uses of FunSuite / FunSuiteLike
2015-05-29 22:57:46 -07:00
Andrew Or a4f24123d8 [HOT FIX] [BUILD] Fix maven build failures
This patch fixes a build break in maven caused by #6441.

Note that this patch reverts the changes in flume-sink because
this module does not currently depend on Spark core, but the
tests require it. There is not an easy way to make this work
because mvn test dependencies are not transitive (MNG-1378).

For now, we will leave the one test suite in flume-sink out
until we figure out a better solution. This patch is mainly
intended to unbreak the maven build.

Author: Andrew Or <andrew@databricks.com>

Closes #6511 from andrewor14/fix-build-mvn and squashes the following commits:

3d53643 [Andrew Or] [HOT FIX #6441] Fix maven build failures
2015-05-29 17:19:46 -07:00
Andrew Or 9eb222c139 [SPARK-7558] Demarcate tests in unit-tests.log
Right now `unit-tests.log` are not of much value because we can't tell where the test boundaries are easily. This patch adds log statements before and after each test to outline the test boundaries, e.g.:

```
===== TEST OUTPUT FOR o.a.s.serializer.KryoSerializerSuite: 'kryo with parallelize for primitive arrays' =====

15/05/27 12:36:39.596 pool-1-thread-1-ScalaTest-running-KryoSerializerSuite INFO SparkContext: Starting job: count at KryoSerializerSuite.scala:230
15/05/27 12:36:39.596 dag-scheduler-event-loop INFO DAGScheduler: Got job 3 (count at KryoSerializerSuite.scala:230) with 4 output partitions (allowLocal=false)
15/05/27 12:36:39.596 dag-scheduler-event-loop INFO DAGScheduler: Final stage: ResultStage 3(count at KryoSerializerSuite.scala:230)
15/05/27 12:36:39.596 dag-scheduler-event-loop INFO DAGScheduler: Parents of final stage: List()
15/05/27 12:36:39.597 dag-scheduler-event-loop INFO DAGScheduler: Missing parents: List()
15/05/27 12:36:39.597 dag-scheduler-event-loop INFO DAGScheduler: Submitting ResultStage 3 (ParallelCollectionRDD[5] at parallelize at KryoSerializerSuite.scala:230), which has no missing parents

...

15/05/27 12:36:39.624 pool-1-thread-1-ScalaTest-running-KryoSerializerSuite INFO DAGScheduler: Job 3 finished: count at KryoSerializerSuite.scala:230, took 0.028563 s
15/05/27 12:36:39.625 pool-1-thread-1-ScalaTest-running-KryoSerializerSuite INFO KryoSerializerSuite:

***** FINISHED o.a.s.serializer.KryoSerializerSuite: 'kryo with parallelize for primitive arrays' *****

...
```

Author: Andrew Or <andrew@databricks.com>

Closes #6441 from andrewor14/demarcate-tests and squashes the following commits:

879b060 [Andrew Or] Fix compile after rebase
d622af7 [Andrew Or] Merge branch 'master' of github.com:apache/spark into demarcate-tests
017c8ba [Andrew Or] Merge branch 'master' of github.com:apache/spark into demarcate-tests
7790b6c [Andrew Or] Fix tests after logical merge conflict
c7460c0 [Andrew Or] Merge branch 'master' of github.com:apache/spark into demarcate-tests
c43ffc4 [Andrew Or] Fix tests?
8882581 [Andrew Or] Fix tests
ee22cda [Andrew Or] Fix log message
fa9450e [Andrew Or] Merge branch 'master' of github.com:apache/spark into demarcate-tests
12d1e1b [Andrew Or] Various whitespace changes (minor)
69cbb24 [Andrew Or] Make all test suites extend SparkFunSuite instead of FunSuite
bbce12e [Andrew Or] Fix manual things that cannot be covered through automation
da0b12f [Andrew Or] Add core tests as dependencies in all modules
f7d29ce [Andrew Or] Introduce base abstract class for all test suites
2015-05-29 14:03:12 -07:00
Reynold Xin 97a60cf75d [SPARK-7929] Turn whitespace checker on for more token types.
This is the last batch of changes to complete SPARK-7929.

Previous related PRs:
https://github.com/apache/spark/pull/6480
https://github.com/apache/spark/pull/6478
https://github.com/apache/spark/pull/6477
https://github.com/apache/spark/pull/6476
https://github.com/apache/spark/pull/6475
https://github.com/apache/spark/pull/6474
https://github.com/apache/spark/pull/6473

Author: Reynold Xin <rxin@databricks.com>

Closes #6487 from rxin/whitespace-lint and squashes the following commits:

b33d43d [Reynold Xin] [SPARK-7929] Turn whitespace checker on for more token types.
2015-05-28 23:00:02 -07:00
jerluc 0a7a94eab5 [SPARK-7621] [STREAMING] Report Kafka errors to StreamingListeners
PR per [SPARK-7621](https://issues.apache.org/jira/browse/SPARK-7621), which makes both `KafkaReceiver` and `ReliableKafkaReceiver` report its errors to the `ReceiverTracker`, which in turn will add the events to the bus to fire off any registered `StreamingListener`s.

Author: jerluc <jeremyalucas@gmail.com>

Closes #6204 from jerluc/master and squashes the following commits:

82439a5 [jerluc] [SPARK-7621] [STREAMING] Report Kafka errors to StreamingListeners
2015-05-18 18:13:29 -07:00
Andrew Or b93c97d79b [SPARK-7501] [STREAMING] DAG visualization: show DStream operations
This is similar to #5999, but for streaming. Roughly 200 lines are tests.

One thing to note here is that we already do some kind of scoping thing for call sites, so this patch adds the new RDD operation scoping logic in the same place. Also, this patch adds a `try finally` block to set the relevant variables in a safer way.

tdas zsxwing

------------------------
**Before**
<img src="https://cloud.githubusercontent.com/assets/2133137/7625996/d88211b8-f9b4-11e4-90b9-e11baa52d6d7.png" width="450px"/>

--------------------------
**After**
<img src="https://cloud.githubusercontent.com/assets/2133137/7625997/e0878f8c-f9b4-11e4-8df3-7dd611b13c87.png" width="650px"/>

Author: Andrew Or <andrew@databricks.com>

Closes #6034 from andrewor14/dag-viz-streaming and squashes the following commits:

932a64a [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-streaming
e685df9 [Andrew Or] Rename createRDDWith
84d0656 [Andrew Or] Review feedback
697c086 [Andrew Or] Fix tests
53b9936 [Andrew Or] Set scopes for foreachRDD properly
1881802 [Andrew Or] Refactor DStream scope names again
af4ba8d [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-streaming
fd07d22 [Andrew Or] Make MQTT lower case
f6de871 [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-streaming
0ca1801 [Andrew Or] Remove a few unnecessary withScopes on aliases
fa4e5fb [Andrew Or] Pass in input stream name rather than defining it from within
1af0b0e [Andrew Or] Fix style
074c00b [Andrew Or] Review comments
d25a324 [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-streaming
e4a93ac [Andrew Or] Fix tests?
25416dc [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-streaming
9113183 [Andrew Or] Add tests for DStream scopes
b3806ab [Andrew Or] Fix test
bb80bbb [Andrew Or] Fix MIMA?
5c30360 [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-streaming
5703939 [Andrew Or] Rename operations that create InputDStreams
7c4513d [Andrew Or] Group RDDs by DStream operations and batches
bf0ab6e [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-streaming
05c2676 [Andrew Or] Wrap many more methods in withScope
c121047 [Andrew Or] Merge branch 'master' of github.com:apache/spark into dag-viz-streaming
65ef3e9 [Andrew Or] Fix NPE
a0d3263 [Andrew Or] Scope streaming operations instead of RDD operations
2015-05-18 14:33:33 -07:00
Hari Shreedharan 61d1e87c0d [SPARK-7356] [STREAMING] Fix flakey tests in FlumePollingStreamSuite using SparkSink's batch CountDownLatch.
This is meant to make the FlumePollingStreamSuite deterministic. Now we basically count the number of batches that have been completed - and then verify the results rather than sleeping for random periods of time.

Author: Hari Shreedharan <hshreedharan@apache.org>

Closes #5918 from harishreedharan/flume-test-fix and squashes the following commits:

93f24f3 [Hari Shreedharan] Add an eventually block to ensure that all received data is processed. Refactor the dstream creation and remove redundant code.
1108804 [Hari Shreedharan] [SPARK-7356][STREAMING] Fix flakey tests in FlumePollingStreamSuite using SparkSink's batch CountDownLatch.
2015-05-13 16:43:30 -07:00
jerryshao 8436f7e98e [SPARK-7113] [STREAMING] Support input information reporting for Direct Kafka stream
Author: jerryshao <saisai.shao@intel.com>

Closes #5879 from jerryshao/SPARK-7113 and squashes the following commits:

b0b506c [jerryshao] Address the comments
0babe66 [jerryshao] Support input information reporting for Direct Kafka stream
2015-05-05 02:01:06 -07:00