spark-instrumented-optimizer/python/pyspark/mllib/clustering.pyi
zero323 665817bd4f [SPARK-33457][PYTHON] Adjust mypy configuration
### What changes were proposed in this pull request?

This pull request:

- Adds following flags to the main mypy configuration:
  - [`strict_optional`](https://mypy.readthedocs.io/en/stable/config_file.html#confval-strict_optional)
  - [`no_implicit_optional`](https://mypy.readthedocs.io/en/stable/config_file.html#confval-no_implicit_optional)
  - [`disallow_untyped_defs`](https://mypy.readthedocs.io/en/stable/config_file.html#confval-disallow_untyped_calls)

These flags are enabled only for public API and disabled for tests and internal modules.

Additionally, these PR fixes missing annotations.

### Why are the changes needed?

Primary reason to propose this changes is to use standard configuration as used by typeshed project. This will allow us to be more strict, especially when interacting with JVM code. See for example https://github.com/apache/spark/pull/29122#pullrequestreview-513112882

Additionally, it will allow us to detect cases where annotations have unintentionally omitted.

### Does this PR introduce _any_ user-facing change?

Annotations only.

### How was this patch tested?

`dev/lint-python`.

Closes #30382 from zero323/SPARK-33457.

Authored-by: zero323 <mszymkiewicz@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-11-25 09:27:04 +09:00

199 lines
6.6 KiB
Python

#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
from typing import overload
from typing import List, NamedTuple, Optional, Tuple, TypeVar
import array
from numpy import float64, int64, ndarray # type: ignore[import]
from py4j.java_gateway import JavaObject # type: ignore[import]
from pyspark.mllib._typing import VectorLike
from pyspark.context import SparkContext
from pyspark.rdd import RDD
from pyspark.mllib.common import JavaModelWrapper
from pyspark.mllib.stat.distribution import MultivariateGaussian
from pyspark.mllib.util import Saveable, Loader, JavaLoader, JavaSaveable
from pyspark.streaming.dstream import DStream
T = TypeVar("T")
class BisectingKMeansModel(JavaModelWrapper):
centers: List[ndarray]
def __init__(self, java_model: JavaObject) -> None: ...
@property
def clusterCenters(self) -> List[ndarray]: ...
@property
def k(self) -> int: ...
@overload
def predict(self, x: VectorLike) -> int: ...
@overload
def predict(self, x: RDD[VectorLike]) -> RDD[int]: ...
@overload
def computeCost(self, x: VectorLike) -> float: ...
@overload
def computeCost(self, x: RDD[VectorLike]) -> float: ...
class BisectingKMeans:
@classmethod
def train(
self,
rdd: RDD[VectorLike],
k: int = ...,
maxIterations: int = ...,
minDivisibleClusterSize: float = ...,
seed: int = ...,
) -> BisectingKMeansModel: ...
class KMeansModel(Saveable, Loader[KMeansModel]):
centers: List[ndarray]
def __init__(self, centers: List[VectorLike]) -> None: ...
@property
def clusterCenters(self) -> List[ndarray]: ...
@property
def k(self) -> int: ...
@overload
def predict(self, x: VectorLike) -> int: ...
@overload
def predict(self, x: RDD[VectorLike]) -> RDD[int]: ...
def computeCost(self, rdd: RDD[VectorLike]) -> float: ...
def save(self, sc: SparkContext, path: str) -> None: ...
@classmethod
def load(cls, sc: SparkContext, path: str) -> KMeansModel: ...
class KMeans:
@classmethod
def train(
cls,
rdd: RDD[VectorLike],
k: int,
maxIterations: int = ...,
initializationMode: str = ...,
seed: Optional[int] = ...,
initializationSteps: int = ...,
epsilon: float = ...,
initialModel: Optional[KMeansModel] = ...,
) -> KMeansModel: ...
class GaussianMixtureModel(
JavaModelWrapper, JavaSaveable, JavaLoader[GaussianMixtureModel]
):
@property
def weights(self) -> ndarray: ...
@property
def gaussians(self) -> List[MultivariateGaussian]: ...
@property
def k(self) -> int: ...
@overload
def predict(self, x: VectorLike) -> int64: ...
@overload
def predict(self, x: RDD[VectorLike]) -> RDD[int]: ...
@overload
def predictSoft(self, x: VectorLike) -> ndarray: ...
@overload
def predictSoft(self, x: RDD[VectorLike]) -> RDD[array.array]: ...
@classmethod
def load(cls, sc: SparkContext, path: str) -> GaussianMixtureModel: ...
class GaussianMixture:
@classmethod
def train(
cls,
rdd: RDD[VectorLike],
k: int,
convergenceTol: float = ...,
maxIterations: int = ...,
seed: Optional[int] = ...,
initialModel: Optional[GaussianMixtureModel] = ...,
) -> GaussianMixtureModel: ...
class PowerIterationClusteringModel(
JavaModelWrapper, JavaSaveable, JavaLoader[PowerIterationClusteringModel]
):
@property
def k(self) -> int: ...
def assignments(self) -> RDD[PowerIterationClustering.Assignment]: ...
@classmethod
def load(cls, sc: SparkContext, path: str) -> PowerIterationClusteringModel: ...
class PowerIterationClustering:
@classmethod
def train(
cls,
rdd: RDD[Tuple[int, int, float]],
k: int,
maxIterations: int = ...,
initMode: str = ...,
) -> PowerIterationClusteringModel: ...
class Assignment(NamedTuple("Assignment", [("id", int), ("cluster", int)])): ...
class StreamingKMeansModel(KMeansModel):
def __init__(
self, clusterCenters: List[VectorLike], clusterWeights: VectorLike
) -> None: ...
@property
def clusterWeights(self) -> List[float64]: ...
centers: ndarray
def update(
self, data: RDD[VectorLike], decayFactor: float, timeUnit: str
) -> StreamingKMeansModel: ...
class StreamingKMeans:
def __init__(
self, k: int = ..., decayFactor: float = ..., timeUnit: str = ...
) -> None: ...
def latestModel(self) -> StreamingKMeansModel: ...
def setK(self, k: int) -> StreamingKMeans: ...
def setDecayFactor(self, decayFactor: float) -> StreamingKMeans: ...
def setHalfLife(self, halfLife: float, timeUnit: str) -> StreamingKMeans: ...
def setInitialCenters(
self, centers: List[VectorLike], weights: List[float]
) -> StreamingKMeans: ...
def setRandomCenters(
self, dim: int, weight: float, seed: int
) -> StreamingKMeans: ...
def trainOn(self, dstream: DStream[VectorLike]) -> None: ...
def predictOn(self, dstream: DStream[VectorLike]) -> DStream[int]: ...
def predictOnValues(
self, dstream: DStream[Tuple[T, VectorLike]]
) -> DStream[Tuple[T, int]]: ...
class LDAModel(JavaModelWrapper, JavaSaveable, Loader[LDAModel]):
def topicsMatrix(self) -> ndarray: ...
def vocabSize(self) -> int: ...
def describeTopics(
self, maxTermsPerTopic: Optional[int] = ...
) -> List[Tuple[List[int], List[float]]]: ...
@classmethod
def load(cls, sc: SparkContext, path: str) -> LDAModel: ...
class LDA:
@classmethod
def train(
cls,
rdd: RDD[Tuple[int, VectorLike]],
k: int = ...,
maxIterations: int = ...,
docConcentration: float = ...,
topicConcentration: float = ...,
seed: Optional[int] = ...,
checkpointInterval: int = ...,
optimizer: str = ...,
) -> LDAModel: ...