Apache Spark - A unified analytics engine for large-scale data processing
Go to file
zhengruifeng 0a4080ec3b [SPARK-30736][ML] One-Pass ChiSquareTest
### What changes were proposed in this pull request?
1, distributedly gather matrix `contingency` of each feature
2, distributedly compute the results and then collect them back to the driver

### Why are the changes needed?
existing impl is not efficient:
1, it directly collect matrix `contingency` of partial featues to driver and compute the corresponding result on one pass;
2, a matrix  `contingency` of a featues is of size numDistinctValues X numDistinctLabels, so only 1000 matrices can be collected at a time;

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
existing testsuites

Closes #27461 from zhengruifeng/chisq_opt.

Authored-by: zhengruifeng <ruifengz@foxmail.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-02-17 09:41:38 -06:00
.github [MINOR] Update the PR template for adding a link to the configuration naming guideline 2020-02-17 16:05:08 +09:00
assembly [SPARK-30489][BUILD] Make build delete pyspark.zip file properly 2020-01-10 16:59:51 -08:00
bin [SPARK-28525][DEPLOY] Allow Launcher to be applied Java options 2019-07-30 12:45:32 -07:00
build [SPARK-30121][BUILD] Fix memory usage in sbt build script 2019-12-05 11:50:55 -06:00
common [SPARK-30690][DOCS][BUILD] Add CalendarInterval into API documentation 2020-01-31 22:50:01 +09:00
conf [SPARK-29032][CORE] Add PrometheusServlet to monitor Master/Worker/Driver 2019-09-13 21:31:21 +00:00
core [SPARK-30346][CORE] Improve logging when events dropped 2020-02-17 20:16:31 +08:00
data [SPARK-22666][ML][SQL] Spark datasource for image format 2018-09-05 11:59:00 -07:00
dev [SPARK-30722][PYTHON][DOCS] Update documentation for Pandas UDF with Python type hints 2020-02-12 10:49:46 +09:00
docs [SPARK-25829][SQL] Add config spark.sql.legacy.allowDuplicatedMapKeys and change the default behavior 2020-02-17 22:06:58 +08:00
examples [SPARK-30722][PYTHON][DOCS] Update documentation for Pandas UDF with Python type hints 2020-02-12 10:49:46 +09:00
external [SPARK-30669][SS] Introduce AdmissionControl APIs for StructuredStreaming 2020-01-30 22:02:48 -08:00
graphx [GRAPHX][MINOR] Fix typo setRest => setDest 2020-02-16 09:51:02 -06:00
hadoop-cloud [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
launcher [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
licenses [SPARK-27557][DOC] Add copy button to Python API docs for easier copying of code-blocks 2019-05-01 11:26:18 -05:00
licenses-binary [SPARK-29308][BUILD] Update deps in dev/deps/spark-deps-hadoop-3.2 for hadoop-3.2 2019-10-13 12:53:12 -05:00
mllib [SPARK-30736][ML] One-Pass ChiSquareTest 2020-02-17 09:41:38 -06:00
mllib-local [SPARK-30772][ML][SQL] avoid tuple assignment because it will circumvent the transient tag 2020-02-16 10:01:49 -06:00
project [SPARK-30756][SQL] Fix ThriftServerWithSparkContextSuite on spark-branch-3.0-test-sbt-hadoop-2.7-hive-2.3 2020-02-11 15:50:16 +09:00
python [SPARK-25829][SQL] Add config spark.sql.legacy.allowDuplicatedMapKeys and change the default behavior 2020-02-17 22:06:58 +08:00
R [SPARK-30737][SPARK-27262][R][BUILD] Reenable CRAN check with UTF-8 encoding to DESCRIPTION 2020-02-06 13:01:08 +09:00
repl [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
resource-managers [SPARK-20628][CORE][K8S] Start to improve Spark decommissioning & preemption support 2020-02-14 12:36:52 -08:00
sbin [SPARK-20628][CORE][K8S] Start to improve Spark decommissioning & preemption support 2020-02-14 12:36:52 -08:00
sql [SPARK-29089][SQL] Parallelize blocking FileSystem calls in DataSource#checkAndGlobPathIfNecessary 2020-02-17 09:30:35 -06:00
streaming [SPARK-29148][CORE] Add stage level scheduling dynamic allocation and scheduler backend changes 2020-02-12 16:45:42 -06:00
tools [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
.gitattributes [SPARK-30653][INFRA][SQL] EOL character enforcement for java/scala/xml/py/R files 2020-01-27 10:20:51 -08:00
.gitignore [SPARK-30084][DOCS] Document how to trigger Jekyll build on Python API doc changes 2019-12-04 17:31:23 -06:00
appveyor.yml [SPARK-23435][SPARKR][TESTS] Update testthat to >= 2.0.0 2020-01-29 10:37:08 +09:00
CONTRIBUTING.md [MINOR][DOCS] Tighten up some key links to the project and download pages to use HTTPS 2019-05-21 10:56:42 -07:00
LICENSE [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
LICENSE-binary [SPARK-30695][BUILD] Upgrade Apache ORC to 1.5.9 2020-01-31 17:41:27 -08:00
NOTICE [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
NOTICE-binary [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
pom.xml [SPARK-30783] Exclude hive-service-rpc 2020-02-12 00:12:45 +08:00
README.md [MINOR][DOCS] Fix Jenkins build image and link in README.md 2020-01-20 23:08:24 -08:00
scalastyle-config.xml [SPARK-30030][INFRA] Use RegexChecker instead of TokenChecker to check org.apache.commons.lang. 2019-11-25 12:03:15 -08:00

Apache Spark

Spark is a unified analytics engine for large-scale data processing. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing.

https://spark.apache.org/

Jenkins Build AppVeyor Build PySpark Coverage

Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

./build/mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.)

More detailed documentation is available from the project site, at "Building Spark".

For general development tips, including info on developing Spark using an IDE, see "Useful Developer Tools".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1,000,000,000:

scala> spark.range(1000 * 1000 * 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1,000,000,000:

>>> spark.range(1000 * 1000 * 1000).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

There is also a Kubernetes integration test, see resource-managers/kubernetes/integration-tests/README.md

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version and Enabling YARN" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions.

Configuration

Please refer to the Configuration Guide in the online documentation for an overview on how to configure Spark.

Contributing

Please review the Contribution to Spark guide for information on how to get started contributing to the project.