Apache Spark - A unified analytics engine for large-scale data processing
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Liang-Chi Hsieh 0c2aee69b0 [SPARK-22410][SQL] Remove unnecessary output from BatchEvalPython's children plans
## What changes were proposed in this pull request?

When we insert `BatchEvalPython` for Python UDFs into a query plan, if its child has some outputs that are not used by the original parent node, `BatchEvalPython` will still take those outputs and save into the queue. When the data for those outputs are big, it is easily to generate big spill on disk.

For example, the following reproducible code is from the JIRA ticket.

```python
from pyspark.sql.functions import *
from pyspark.sql.types import *

lines_of_file = [ "this is a line" for x in xrange(10000) ]
file_obj = [ "this_is_a_foldername/this_is_a_filename", lines_of_file ]
data = [ file_obj for x in xrange(5) ]

small_df = spark.sparkContext.parallelize(data).map(lambda x : (x[0], x[1])).toDF(["file", "lines"])
exploded = small_df.select("file", explode("lines"))

def split_key(s):
    return s.split("/")[1]

split_key_udf = udf(split_key, StringType())

with_filename = exploded.withColumn("filename", split_key_udf("file"))
with_filename.explain(True)
```

The physical plan before/after this change:

Before:

```
*Project [file#0, col#5, pythonUDF0#14 AS filename#9]
+- BatchEvalPython [split_key(file#0)], [file#0, lines#1, col#5, pythonUDF0#14]
   +- Generate explode(lines#1), true, false, [col#5]
      +- Scan ExistingRDD[file#0,lines#1]

```

After:

```
*Project [file#0, col#5, pythonUDF0#14 AS filename#9]
+- BatchEvalPython [split_key(file#0)], [col#5, file#0, pythonUDF0#14]
   +- *Project [col#5, file#0]
      +- Generate explode(lines#1), true, false, [col#5]
         +- Scan ExistingRDD[file#0,lines#1]
```

Before this change, `lines#1` is a redundant input to `BatchEvalPython`. This patch removes it by adding a Project.

## How was this patch tested?

Manually test.

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #19642 from viirya/SPARK-22410.
2017-11-04 13:11:09 +01:00
.github [SPARK-18073][DOCS][WIP] Migrate wiki to spark.apache.org web site 2016-11-23 11:25:47 +00:00
assembly [SPARK-22066][BUILD] Update checkstyle to 8.2, enable it, fix violations 2017-09-20 10:01:46 +01:00
bin [SPARK-21877][DEPLOY, WINDOWS] Handle quotes in Windows command scripts 2017-10-06 23:38:47 +09:00
build [SPARK-19810][BUILD][CORE] Remove support for Scala 2.10 2017-07-13 17:06:24 +08:00
common [SPARK-20643][CORE] Add listener implementation to collect app state. 2017-10-26 11:05:16 -05:00
conf [SPARK-11574][CORE] Add metrics StatsD sink 2017-08-31 08:57:15 +08:00
core [SPARK-22254][CORE] Fix the arrayMax in BufferHolder 2017-11-03 23:35:57 -07:00
data [SPARK-16421][EXAMPLES][ML] Improve ML Example Outputs 2016-08-05 20:57:46 +01:00
dev [SPARK-19112][CORE] Support for ZStandard codec 2017-11-01 14:54:08 +01:00
docs [MINOR][DOC] automatic type inference supports also Date and Timestamp 2017-11-02 09:30:03 +09:00
examples [SPARK-22399][ML] update the location of reference paper 2017-10-31 08:20:23 +00:00
external [SPARK-22291][SQL] Conversion error when transforming array types of uuid, inet and cidr to StingType in PostgreSQL 2017-10-29 18:11:48 +01:00
graphx [MINOR][DOC] Add missing call of update() in examples of PeriodicGraphCheckpointer & PeriodicRDDCheckpointer 2017-09-14 14:04:43 +08:00
hadoop-cloud [SPARK-7481][BUILD] Add spark-hadoop-cloud module to pull in object store access. 2017-05-07 10:15:31 +01:00
launcher [SPARK-21991][LAUNCHER][FOLLOWUP] Fix java lint 2017-10-25 14:41:02 -07:00
licenses [SPARK-19112][CORE] Support for ZStandard codec 2017-11-01 14:54:08 +01:00
mllib [SPARK-22423][SQL] Scala test source files like TestHiveSingleton.scala should be in scala source root 2017-11-04 11:51:10 +00:00
mllib-local [SPARK-14280][BUILD][WIP] Update change-version.sh and pom.xml to add Scala 2.12 profiles and enable 2.12 compilation 2017-09-01 19:21:21 +01:00
project [SPARK-21708][BUILD] update some sbt plugins 2017-10-31 08:16:54 +00:00
python [SPARK-22437][PYSPARK] default mode for jdbc is wrongly set to None 2017-11-04 16:59:58 +09:00
R [SPARK-22327][SPARKR][TEST] check for version warning 2017-10-30 21:44:24 -07:00
repl [SPARK-14650][REPL][BUILD] Compile Spark REPL for Scala 2.12 2017-11-02 09:45:34 +00:00
resource-managers [SPARK-22145][MESOS] fix supervise with checkpointing on mesos 2017-11-02 13:25:48 +00:00
sbin [SPARK-21278][PYSPARK] Upgrade to Py4J 0.10.6 2017-07-05 16:33:23 -07:00
sql [SPARK-22410][SQL] Remove unnecessary output from BatchEvalPython's children plans 2017-11-04 13:11:09 +01:00
streaming [SPARK-22423][SQL] Scala test source files like TestHiveSingleton.scala should be in scala source root 2017-11-04 11:51:10 +00:00
tools [SPARK-14280][BUILD][WIP] Update change-version.sh and pom.xml to add Scala 2.12 profiles and enable 2.12 compilation 2017-09-01 19:21:21 +01:00
.gitattributes [SPARK-3870] EOL character enforcement 2014-10-31 12:39:52 -07:00
.gitignore [SPARK-21485][SQL][DOCS] Spark SQL documentation generation for built-in functions 2017-07-26 09:38:51 -07:00
.travis.yml [SPARK-19801][BUILD] Remove JDK7 from Travis CI 2017-03-03 12:00:54 +01:00
appveyor.yml [BUILD][TEST][SPARKR] add sparksubmitsuite to appveyor tests 2017-09-11 09:32:25 +09:00
CONTRIBUTING.md [SPARK-18073][DOCS][WIP] Migrate wiki to spark.apache.org web site 2016-11-23 11:25:47 +00:00
LICENSE [SPARK-19112][CORE] Support for ZStandard codec 2017-11-01 14:54:08 +01:00
NOTICE [SPARK-18262][BUILD][SQL] JSON.org license is now CatX 2016-11-10 10:20:03 -08:00
pom.xml [SPARK-14650][REPL][BUILD] Compile Spark REPL for Scala 2.12 2017-11-02 09:45:34 +00:00
README.md [MINOR][DOCS] Replace non-breaking space to normal spaces that breaks rendering markdown 2017-04-03 10:09:11 +01:00
scalastyle-config.xml [SPARK-20642][CORE] Store FsHistoryProvider listing data in a KVStore. 2017-09-27 20:33:41 +08:00

Apache Spark

Spark is a fast and general cluster computing system for Big Data. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Spark Streaming for stream processing.

http://spark.apache.org/

Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

build/mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.)

You can build Spark using more than one thread by using the -T option with Maven, see "Parallel builds in Maven 3". More detailed documentation is available from the project site, at "Building Spark".

For general development tips, including info on developing Spark using an IDE, see "Useful Developer Tools".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1000:

scala> sc.parallelize(1 to 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1000:

>>> sc.parallelize(range(1000)).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions.

Configuration

Please refer to the Configuration Guide in the online documentation for an overview on how to configure Spark.

Contributing

Please review the Contribution to Spark guide for information on how to get started contributing to the project.