Apache Spark - A unified analytics engine for large-scale data processing
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HyukjinKwon 1a042cc414 [SPARK-33530][CORE] Support --archives and spark.archives option natively
### What changes were proposed in this pull request?

TL;DR:
- This PR completes the support of archives in Spark itself instead of Yarn-only
  - It makes `--archives` option work in other cluster modes too and adds `spark.archives` configuration.
-  After this PR, PySpark users can leverage Conda to ship Python packages together as below:
    ```python
    conda create -y -n pyspark_env -c conda-forge pyarrow==2.0.0 pandas==1.1.4 conda-pack==0.5.0
    conda activate pyspark_env
    conda pack -f -o pyspark_env.tar.gz
    PYSPARK_DRIVER_PYTHON=python PYSPARK_PYTHON=./environment/bin/python pyspark --archives pyspark_env.tar.gz#environment
   ```
- Issue a warning that undocumented and hidden behavior of partial archive handling in `spark.files` / `SparkContext.addFile` will be deprecated, and users can use `spark.archives` and `SparkContext.addArchive`.

This PR proposes to add Spark's native `--archives` in Spark submit, and `spark.archives` configuration. Currently, both are supported only in Yarn mode:

```bash
./bin/spark-submit --help
```

```
Options:
...
 Spark on YARN only:
  --queue QUEUE_NAME          The YARN queue to submit to (Default: "default").
  --archives ARCHIVES         Comma separated list of archives to be extracted into the
                              working directory of each executor.
```

This `archives` feature is useful often when you have to ship a directory and unpack into executors. One example is native libraries to use e.g. JNI. Another example is to ship Python packages together by Conda environment.

Especially for Conda, PySpark currently does not have a nice way to ship a package that works in general, please see also https://hyukjin-spark.readthedocs.io/en/stable/user_guide/python_packaging.html#using-zipped-virtual-environment (PySpark new documentation demo for 3.1.0).

The neatest way is arguably to use Conda environment by shipping zipped Conda environment but this is currently dependent on this archive feature. NOTE that we are able to use `spark.files` by relying on its undocumented behaviour that untars `tar.gz` but I don't think we should document such ways and promote people to more rely on it.

Also, note that this PR does not target to add the feature parity of `spark.files.overwrite`, `spark.files.useFetchCache`, etc. yet. I documented that this is an experimental feature as well.

### Why are the changes needed?

To complete the feature parity, and to provide a better support of shipping Python libraries together with Conda env.

### Does this PR introduce _any_ user-facing change?

Yes, this makes `--archives` works in Spark instead of Yarn-only, and adds a new configuration `spark.archives`.

### How was this patch tested?

I added unittests. Also, manually tested in standalone cluster, local-cluster, and local modes.

Closes #30486 from HyukjinKwon/native-archive.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-12-01 13:43:02 +09:00
.github [SPARK-33464][INFRA] Add/remove (un)necessary cache and restructure GitHub Actions yaml 2020-11-18 15:13:43 -08:00
assembly [SPARK-30950][BUILD] Setting version to 3.1.0-SNAPSHOT 2020-02-25 19:44:31 -08:00
bin [MINOR] Spelling bin core docs external mllib repl 2020-11-30 13:59:51 +09:00
binder [SPARK-32204][SPARK-32182][DOCS] Add a quickstart page with Binder integration in PySpark documentation 2020-08-26 12:23:24 +09:00
build [SPARK-32998][BUILD] Add ability to override default remote repos with internal one 2020-10-22 16:35:55 -07:00
common Spelling r common dev mlib external project streaming resource managers python 2020-11-27 10:22:45 -06:00
conf [SPARK-32004][ALL] Drop references to slave 2020-07-13 14:05:33 -07:00
core [SPARK-33530][CORE] Support --archives and spark.archives option natively 2020-12-01 13:43:02 +09:00
data [SPARK-22666][ML][SQL] Spark datasource for image format 2018-09-05 11:59:00 -07:00
dev [SPARK-33592] Fix: Pyspark ML Validator params in estimatorParamMaps may be lost after saving and reloading 2020-12-01 09:36:42 +08:00
docs [SPARK-33530][CORE] Support --archives and spark.archives option natively 2020-12-01 13:43:02 +09:00
examples [SPARK-31962][SQL] Provide modifiedAfter and modifiedBefore options when filtering from a batch-based file data source 2020-11-23 08:30:41 +09:00
external [SPARK-33570][SQL][TESTS] Set the proper version of gssapi plugin automatically for MariaDBKrbIntegrationSuite 2020-11-28 23:38:11 +09:00
graphx [MINOR][GRAPHX] Correct typos in the sub-modules: graphx, external, and examples 2020-11-12 08:29:22 +09:00
hadoop-cloud [SPARK-33212][BUILD] Move to shaded clients for Hadoop 3.x profile 2020-10-22 03:21:34 +00:00
launcher [SPARK-33212][BUILD] Move to shaded clients for Hadoop 3.x profile 2020-10-22 03:21:34 +00:00
licenses [SPARK-32435][PYTHON] Remove heapq3 port from Python 3 2020-07-27 20:10:13 +09:00
licenses-binary [SPARK-32435][PYTHON] Remove heapq3 port from Python 3 2020-07-27 20:10:13 +09:00
mllib [SPARK-33556][ML] Add array_to_vector function for dataframe column 2020-12-01 09:52:19 +09:00
mllib-local [SPARK-33513][BUILD] Upgrade to Scala 2.13.4 to improve exhaustivity 2020-11-23 16:28:43 -08:00
project [SPARK-33530][CORE] Support --archives and spark.archives option natively 2020-12-01 13:43:02 +09:00
python [SPARK-33530][CORE] Support --archives and spark.archives option natively 2020-12-01 13:43:02 +09:00
R Spelling r common dev mlib external project streaming resource managers python 2020-11-27 10:22:45 -06:00
repl [MINOR] Spelling bin core docs external mllib repl 2020-11-30 13:59:51 +09:00
resource-managers [SPARK-33530][CORE] Support --archives and spark.archives option natively 2020-12-01 13:43:02 +09:00
sbin [MINOR][DOCS] fix typo for docs,log message and comments 2020-08-22 06:45:35 +09:00
sql [SPARK-30900][SS] FileStreamSource: Avoid reading compact metadata log twice if the query restarts from compact batch 2020-12-01 13:11:14 +09:00
streaming Spelling r common dev mlib external project streaming resource managers python 2020-11-27 10:22:45 -06:00
tools [SPARK-21708][BUILD] Migrate build to sbt 1.x 2020-10-07 15:28:00 -07:00
.asf.yaml [SPARK-31352] Add .asf.yaml to control Github settings 2020-04-06 09:06:01 -05:00
.gitattributes [SPARK-30653][INFRA][SQL] EOL character enforcement for java/scala/xml/py/R files 2020-01-27 10:20:51 -08:00
.gitignore [SPARK-33269][INFRA] Ignore ".bsp/" directory in Git 2020-10-28 21:32:09 +09:00
.sbtopts [SPARK-21708][BUILD] Migrate build to sbt 1.x 2020-10-07 15:28:00 -07:00
appveyor.yml [SPARK-32647][INFRA] Report SparkR test results with JUnit reporter 2020-08-18 19:35:15 +09:00
CONTRIBUTING.md [MINOR][DOCS] Tighten up some key links to the project and download pages to use HTTPS 2019-05-21 10:56:42 -07:00
LICENSE [SPARK-32435][PYTHON] Remove heapq3 port from Python 3 2020-07-27 20:10:13 +09:00
LICENSE-binary [SPARK-32435][PYTHON] Remove heapq3 port from Python 3 2020-07-27 20:10:13 +09:00
NOTICE [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
NOTICE-binary [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
pom.xml [MINOR] Spelling bin core docs external mllib repl 2020-11-30 13:59:51 +09:00
README.md [MINOR][DOCS] Fix Jenkins build image and link in README.md 2020-01-20 23:08:24 -08:00
scalastyle-config.xml [SPARK-32539][INFRA] Disallow FileSystem.get(Configuration conf) in style check by default 2020-08-06 05:56:59 +00:00

Apache Spark

Spark is a unified analytics engine for large-scale data processing. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing.

https://spark.apache.org/

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Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

./build/mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.)

More detailed documentation is available from the project site, at "Building Spark".

For general development tips, including info on developing Spark using an IDE, see "Useful Developer Tools".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1,000,000,000:

scala> spark.range(1000 * 1000 * 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1,000,000,000:

>>> spark.range(1000 * 1000 * 1000).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

There is also a Kubernetes integration test, see resource-managers/kubernetes/integration-tests/README.md

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version and Enabling YARN" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions.

Configuration

Please refer to the Configuration Guide in the online documentation for an overview on how to configure Spark.

Contributing

Please review the Contribution to Spark guide for information on how to get started contributing to the project.