Apache Spark - A unified analytics engine for large-scale data processing
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Xiangrui Meng 23af00f9e0 Merge pull request #528 from mengxr/sample. Closes #528.
Refactor RDD sampling and add randomSplit to RDD (update)

Replace SampledRDD by PartitionwiseSampledRDD, which accepts a RandomSampler instance as input. The current sample with/without replacement can be easily integrated via BernoulliSampler and PoissonSampler. The benefits are:

1) RDD.randomSplit is implemented in the same way, related to https://github.com/apache/incubator-spark/pull/513
2) Stratified sampling and importance sampling can be implemented in the same manner as well.

Unit tests are included for samplers and RDD.randomSplit.

This should performance better than my previous request where the BernoulliSampler creates many Iterator instances:
https://github.com/apache/incubator-spark/pull/513

Author: Xiangrui Meng <meng@databricks.com>

== Merge branch commits ==

commit e8ce957e5f0a600f2dec057924f4a2ca6adba373
Author: Xiangrui Meng <meng@databricks.com>
Date:   Mon Feb 3 12:21:08 2014 -0800

    more docs to PartitionwiseSampledRDD

commit fbb4586d0478ff638b24bce95f75ff06f713d43b
Author: Xiangrui Meng <meng@databricks.com>
Date:   Mon Feb 3 00:44:23 2014 -0800

    move XORShiftRandom to util.random and use it in BernoulliSampler

commit 987456b0ee8612fd4f73cb8c40967112dc3c4c2d
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sat Feb 1 11:06:59 2014 -0800

    relax assertions in SortingSuite because the RangePartitioner has large variance in this case

commit 3690aae416b2dc9b2f9ba32efa465ba7948477f4
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sat Feb 1 09:56:28 2014 -0800

    test split ratio of RDD.randomSplit

commit 8a410bc933a60c4d63852606f8bbc812e416d6ae
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sat Feb 1 09:25:22 2014 -0800

    add a test to ensure seed distribution and minor style update

commit ce7e866f674c30ab48a9ceb09da846d5362ab4b6
Author: Xiangrui Meng <meng@databricks.com>
Date:   Fri Jan 31 18:06:22 2014 -0800

    minor style change

commit 750912b4d77596ed807d361347bd2b7e3b9b7a74
Author: Xiangrui Meng <meng@databricks.com>
Date:   Fri Jan 31 18:04:54 2014 -0800

    fix some long lines

commit c446a25c38d81db02821f7f194b0ce5ab4ed7ff5
Author: Xiangrui Meng <meng@databricks.com>
Date:   Fri Jan 31 17:59:59 2014 -0800

    add complement to BernoulliSampler and minor style changes

commit dbe2bc2bd888a7bdccb127ee6595840274499403
Author: Xiangrui Meng <meng@databricks.com>
Date:   Fri Jan 31 17:45:08 2014 -0800

    switch to partition-wise sampling for better performance

commit a1fca5232308feb369339eac67864c787455bb23
Merge: ac712e4 cf6128f
Author: Xiangrui Meng <meng@databricks.com>
Date:   Fri Jan 31 16:33:09 2014 -0800

    Merge branch 'sample' of github.com:mengxr/incubator-spark into sample

commit cf6128fb672e8c589615adbd3eaa3cbdb72bd461
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sun Jan 26 14:40:07 2014 -0800

    set SampledRDD deprecated in 1.0

commit f430f847c3df91a3894687c513f23f823f77c255
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sun Jan 26 14:38:59 2014 -0800

    update code style

commit a8b5e2021a9204e318c80a44d00c5c495f1befb6
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sun Jan 26 12:56:27 2014 -0800

    move package random to util.random

commit ab0fa2c4965033737a9e3a9bf0a59cbb0df6a6f5
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sun Jan 26 12:50:35 2014 -0800

    add Apache headers and update code style

commit 985609fe1a55655ad11966e05a93c18c138a403d
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sun Jan 26 11:49:25 2014 -0800

    add new lines

commit b21bddf29850a2c006a868869b8f91960a029322
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sun Jan 26 11:46:35 2014 -0800

    move samplers to random.IndependentRandomSampler and add tests

commit c02dacb4a941618e434cefc129c002915db08be6
Author: Xiangrui Meng <meng@databricks.com>
Date:   Sat Jan 25 15:20:24 2014 -0800

    add RandomSampler

commit 8ff7ba3c5cf1fc338c29ae8b5fa06c222640e89c
Author: Xiangrui Meng <meng@databricks.com>
Date:   Fri Jan 24 13:23:22 2014 -0800

    init impl of IndependentlySampledRDD
2014-02-03 13:02:09 -08:00
assembly Merge pull request #527 from ankurdave/graphx-assembly-pom 2014-01-31 16:52:02 -08:00
bagel Removing mentions in tests 2014-01-12 16:53:58 -08:00
bin Merge pull request #484 from tdas/run-example-fix 2014-01-20 23:34:35 -08:00
conf Make DEBUG-level logs consummable. 2014-01-10 10:33:24 -08:00
core Merge pull request #528 from mengxr/sample. Closes #528. 2014-02-03 13:02:09 -08:00
data moved user scripts to bin folder 2013-09-23 12:46:48 +08:00
docker A little revise for the document 2013-10-29 00:28:56 +08:00
docs Merge pull request #524 from rxin/doc 2014-01-30 09:33:18 -08:00
ec2 Add i2 instance types to Spark EC2. 2014-01-10 12:44:55 -08:00
examples Merge pull request #529 from hsaputra/cleanup_right_arrowop_scala 2014-02-02 21:51:17 -08:00
external Merge pull request #529 from hsaputra/cleanup_right_arrowop_scala 2014-02-02 21:51:17 -08:00
graphx Add jblas dependency 2014-01-23 19:48:39 +08:00
mllib Merge pull request #528 from mengxr/sample. Closes #528. 2014-02-03 13:02:09 -08:00
project modified SparkPluginBuild.scala to use https protocol for accessing github. 2014-01-27 17:00:26 +09:00
python Switch from MUTF8 to UTF8 in PySpark serializers. 2014-01-28 20:20:08 -08:00
repl Add missing header files 2014-01-14 01:17:13 -08:00
sbin Update stop-slaves.sh 2014-01-07 11:11:59 +08:00
sbt Small typo fix 2014-01-09 00:12:34 -08:00
streaming Merge pull request #529 from hsaputra/cleanup_right_arrowop_scala 2014-02-02 21:51:17 -08:00
tools Fixed import formatting. 2014-01-12 22:27:07 -08:00
yarn Incorporate Tom's comments - update doc and code to reflect that core requests may not always be honored 2014-01-21 00:38:02 -08:00
.gitignore Restricting /lib to top level directory in .gitignore 2014-01-20 20:39:30 -08:00
LICENSE Updated LICENSE with third-party licenses 2013-09-02 16:43:06 -07:00
make-distribution.sh fix make-distribution.sh show version: command not found 2014-01-09 00:34:53 +08:00
NOTICE Add Apache license headers and LICENSE and NOTICE files 2013-07-16 17:21:33 -07:00
pom.xml Increase JUnit test verbosity under SBT. 2014-01-25 16:32:44 -08:00
README.md Update README.md 2014-01-08 11:36:26 +05:30

Apache Spark

Lightning-Fast Cluster Computing - http://spark.incubator.apache.org/

Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project webpage at http://spark.incubator.apache.org/documentation.html. This README file only contains basic setup instructions.

Building

Spark requires Scala 2.10. The project is built using Simple Build Tool (SBT), which can be obtained here. If SBT is installed we will use the system version of sbt otherwise we will attempt to download it automatically. To build Spark and its example programs, run:

./sbt/sbt assembly

Once you've built Spark, the easiest way to start using it is the shell:

./bin/spark-shell

Or, for the Python API, the Python shell (./bin/pyspark).

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> <params>. For example:

./bin/run-example org.apache.spark.examples.SparkLR local[2]

will run the Logistic Regression example locally on 2 CPUs.

Each of the example programs prints usage help if no params are given.

All of the Spark samples take a <master> parameter that is the cluster URL to connect to. This can be a mesos:// or spark:// URL, or "local" to run locally with one thread, or "local[N]" to run locally with N threads.

Running tests

Testing first requires Building Spark. Once Spark is built, tests can be run using:

./sbt/sbt test

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs. You can change the version by setting the SPARK_HADOOP_VERSION environment when building Spark.

For Apache Hadoop versions 1.x, Cloudera CDH MRv1, and other Hadoop versions without YARN, use:

# Apache Hadoop 1.2.1
$ SPARK_HADOOP_VERSION=1.2.1 sbt/sbt assembly

# Cloudera CDH 4.2.0 with MapReduce v1
$ SPARK_HADOOP_VERSION=2.0.0-mr1-cdh4.2.0 sbt/sbt assembly

For Apache Hadoop 2.2.X, 2.1.X, 2.0.X, 0.23.x, Cloudera CDH MRv2, and other Hadoop versions with YARN, also set SPARK_YARN=true:

# Apache Hadoop 2.0.5-alpha
$ SPARK_HADOOP_VERSION=2.0.5-alpha SPARK_YARN=true sbt/sbt assembly

# Cloudera CDH 4.2.0 with MapReduce v2
$ SPARK_HADOOP_VERSION=2.0.0-cdh4.2.0 SPARK_YARN=true sbt/sbt assembly

# Apache Hadoop 2.2.X and newer
$ SPARK_HADOOP_VERSION=2.2.0 SPARK_YARN=true sbt/sbt assembly

When developing a Spark application, specify the Hadoop version by adding the "hadoop-client" artifact to your project's dependencies. For example, if you're using Hadoop 1.2.1 and build your application using SBT, add this entry to libraryDependencies:

"org.apache.hadoop" % "hadoop-client" % "1.2.1"

If your project is built with Maven, add this to your POM file's <dependencies> section:

<dependency>
  <groupId>org.apache.hadoop</groupId>
  <artifactId>hadoop-client</artifactId>
  <version>1.2.1</version>
</dependency>

Configuration

Please refer to the Configuration guide in the online documentation for an overview on how to configure Spark.

Apache Incubator Notice

Apache Spark is an effort undergoing incubation at The Apache Software Foundation (ASF), sponsored by the Apache Incubator. Incubation is required of all newly accepted projects until a further review indicates that the infrastructure, communications, and decision making process have stabilized in a manner consistent with other successful ASF projects. While incubation status is not necessarily a reflection of the completeness or stability of the code, it does indicate that the project has yet to be fully endorsed by the ASF.

Contributing to Spark

Contributions via GitHub pull requests are gladly accepted from their original author. Along with any pull requests, please state that the contribution is your original work and that you license the work to the project under the project's open source license. Whether or not you state this explicitly, by submitting any copyrighted material via pull request, email, or other means you agree to license the material under the project's open source license and warrant that you have the legal authority to do so.