spark-instrumented-optimizer/python/pyspark/streaming/context.py
freeman 242b4f02df [SPARK-4969][STREAMING][PYTHON] Add binaryRecords to streaming
In Spark 1.2 we added a `binaryRecords` input method for loading flat binary data. This format is useful for numerical array data, e.g. in scientific computing applications. This PR adds support for the same format in Streaming applications, where it is similarly useful, especially for streaming time series or sensor data.

Summary of additions
- adding `binaryRecordsStream` to Spark Streaming
- exposing `binaryRecordsStream` in the new PySpark Streaming
- new unit tests in Scala and Python

This required adding an optional Hadoop configuration param to `fileStream` and `FileInputStream`, but was otherwise straightforward.

tdas davies

Author: freeman <the.freeman.lab@gmail.com>

Closes #3803 from freeman-lab/streaming-binary-records and squashes the following commits:

b676534 [freeman] Clarify note
5ff1b75 [freeman] Add note to java streaming context
eba925c [freeman] Simplify notes
c4237b8 [freeman] Add experimental tag
30eba67 [freeman] Add filter and newFilesOnly alongside conf
c2cfa6d [freeman] Expose new version of fileStream with conf in java
34d20ef [freeman] Add experimental tag
14bca9a [freeman] Add experimental tag
b85bffc [freeman] Formatting
47560f4 [freeman] Space formatting
9a3715a [freeman] Refactor to reflect changes to FileInputSuite
7373f73 [freeman] Add note and defensive assertion for byte length
3ceb684 [freeman] Merge remote-tracking branch 'upstream/master' into streaming-binary-records
317b6d1 [freeman] Make test inline
fcb915c [freeman] Formatting
becb344 [freeman] Formatting
d3e75b2 [freeman] Add tests in python
a4324a3 [freeman] Line length
029d49c [freeman] Formatting
1c739aa [freeman] Simpler default arg handling
94d90d0 [freeman] Spelling
2843e9d [freeman] Add params to docstring
8b70fbc [freeman] Reorganization
28bff9b [freeman] Fix missing arg
9398bcb [freeman] Expose optional hadoop configuration
23dd69f [freeman] Tests for binaryRecordsStream
36cb0fd [freeman] Add binaryRecordsStream to scala
fe4e803 [freeman] Add binaryRecordStream to Java API
ecef0eb [freeman] Add binaryRecordsStream to python
8550c26 [freeman] Expose additional argument combination
2015-02-03 22:24:30 -08:00

340 lines
14 KiB
Python

#
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# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License. You may obtain a copy of the License at
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# http://www.apache.org/licenses/LICENSE-2.0
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# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
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# See the License for the specific language governing permissions and
# limitations under the License.
#
import os
import sys
from py4j.java_collections import ListConverter
from py4j.java_gateway import java_import, JavaObject
from pyspark import RDD, SparkConf
from pyspark.serializers import NoOpSerializer, UTF8Deserializer, CloudPickleSerializer
from pyspark.context import SparkContext
from pyspark.storagelevel import StorageLevel
from pyspark.streaming.dstream import DStream
from pyspark.streaming.util import TransformFunction, TransformFunctionSerializer
__all__ = ["StreamingContext"]
def _daemonize_callback_server():
"""
Hack Py4J to daemonize callback server
The thread of callback server has daemon=False, it will block the driver
from exiting if it's not shutdown. The following code replace `start()`
of CallbackServer with a new version, which set daemon=True for this
thread.
Also, it will update the port number (0) with real port
"""
# TODO: create a patch for Py4J
import socket
import py4j.java_gateway
logger = py4j.java_gateway.logger
from py4j.java_gateway import Py4JNetworkError
from threading import Thread
def start(self):
"""Starts the CallbackServer. This method should be called by the
client instead of run()."""
self.server_socket = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
self.server_socket.setsockopt(socket.SOL_SOCKET, socket.SO_REUSEADDR,
1)
try:
self.server_socket.bind((self.address, self.port))
if not self.port:
# update port with real port
self.port = self.server_socket.getsockname()[1]
except Exception as e:
msg = 'An error occurred while trying to start the callback server: %s' % e
logger.exception(msg)
raise Py4JNetworkError(msg)
# Maybe thread needs to be cleanup up?
self.thread = Thread(target=self.run)
self.thread.daemon = True
self.thread.start()
py4j.java_gateway.CallbackServer.start = start
class StreamingContext(object):
"""
Main entry point for Spark Streaming functionality. A StreamingContext
represents the connection to a Spark cluster, and can be used to create
L{DStream} various input sources. It can be from an existing L{SparkContext}.
After creating and transforming DStreams, the streaming computation can
be started and stopped using `context.start()` and `context.stop()`,
respectively. `context.awaitTermination()` allows the current thread
to wait for the termination of the context by `stop()` or by an exception.
"""
_transformerSerializer = None
def __init__(self, sparkContext, batchDuration=None, jssc=None):
"""
Create a new StreamingContext.
@param sparkContext: L{SparkContext} object.
@param batchDuration: the time interval (in seconds) at which streaming
data will be divided into batches
"""
self._sc = sparkContext
self._jvm = self._sc._jvm
self._jssc = jssc or self._initialize_context(self._sc, batchDuration)
def _initialize_context(self, sc, duration):
self._ensure_initialized()
return self._jvm.JavaStreamingContext(sc._jsc, self._jduration(duration))
def _jduration(self, seconds):
"""
Create Duration object given number of seconds
"""
return self._jvm.Duration(int(seconds * 1000))
@classmethod
def _ensure_initialized(cls):
SparkContext._ensure_initialized()
gw = SparkContext._gateway
java_import(gw.jvm, "org.apache.spark.streaming.*")
java_import(gw.jvm, "org.apache.spark.streaming.api.java.*")
java_import(gw.jvm, "org.apache.spark.streaming.api.python.*")
# start callback server
# getattr will fallback to JVM, so we cannot test by hasattr()
if "_callback_server" not in gw.__dict__:
_daemonize_callback_server()
# use random port
gw._start_callback_server(0)
# gateway with real port
gw._python_proxy_port = gw._callback_server.port
# get the GatewayServer object in JVM by ID
jgws = JavaObject("GATEWAY_SERVER", gw._gateway_client)
# update the port of CallbackClient with real port
gw.jvm.PythonDStream.updatePythonGatewayPort(jgws, gw._python_proxy_port)
# register serializer for TransformFunction
# it happens before creating SparkContext when loading from checkpointing
cls._transformerSerializer = TransformFunctionSerializer(
SparkContext._active_spark_context, CloudPickleSerializer(), gw)
@classmethod
def getOrCreate(cls, checkpointPath, setupFunc):
"""
Either recreate a StreamingContext from checkpoint data or create a new StreamingContext.
If checkpoint data exists in the provided `checkpointPath`, then StreamingContext will be
recreated from the checkpoint data. If the data does not exist, then the provided setupFunc
will be used to create a JavaStreamingContext.
@param checkpointPath: Checkpoint directory used in an earlier JavaStreamingContext program
@param setupFunc: Function to create a new JavaStreamingContext and setup DStreams
"""
# TODO: support checkpoint in HDFS
if not os.path.exists(checkpointPath) or not os.listdir(checkpointPath):
ssc = setupFunc()
ssc.checkpoint(checkpointPath)
return ssc
cls._ensure_initialized()
gw = SparkContext._gateway
try:
jssc = gw.jvm.JavaStreamingContext(checkpointPath)
except Exception:
print >>sys.stderr, "failed to load StreamingContext from checkpoint"
raise
jsc = jssc.sparkContext()
conf = SparkConf(_jconf=jsc.getConf())
sc = SparkContext(conf=conf, gateway=gw, jsc=jsc)
# update ctx in serializer
SparkContext._active_spark_context = sc
cls._transformerSerializer.ctx = sc
return StreamingContext(sc, None, jssc)
@property
def sparkContext(self):
"""
Return SparkContext which is associated with this StreamingContext.
"""
return self._sc
def start(self):
"""
Start the execution of the streams.
"""
self._jssc.start()
def awaitTermination(self, timeout=None):
"""
Wait for the execution to stop.
@param timeout: time to wait in seconds
"""
if timeout is None:
self._jssc.awaitTermination()
else:
self._jssc.awaitTermination(int(timeout * 1000))
def stop(self, stopSparkContext=True, stopGraceFully=False):
"""
Stop the execution of the streams, with option of ensuring all
received data has been processed.
@param stopSparkContext: Stop the associated SparkContext or not
@param stopGracefully: Stop gracefully by waiting for the processing
of all received data to be completed
"""
self._jssc.stop(stopSparkContext, stopGraceFully)
if stopSparkContext:
self._sc.stop()
def remember(self, duration):
"""
Set each DStreams in this context to remember RDDs it generated
in the last given duration. DStreams remember RDDs only for a
limited duration of time and releases them for garbage collection.
This method allows the developer to specify how to long to remember
the RDDs (if the developer wishes to query old data outside the
DStream computation).
@param duration: Minimum duration (in seconds) that each DStream
should remember its RDDs
"""
self._jssc.remember(self._jduration(duration))
def checkpoint(self, directory):
"""
Sets the context to periodically checkpoint the DStream operations for master
fault-tolerance. The graph will be checkpointed every batch interval.
@param directory: HDFS-compatible directory where the checkpoint data
will be reliably stored
"""
self._jssc.checkpoint(directory)
def socketTextStream(self, hostname, port, storageLevel=StorageLevel.MEMORY_AND_DISK_SER_2):
"""
Create an input from TCP source hostname:port. Data is received using
a TCP socket and receive byte is interpreted as UTF8 encoded ``\\n`` delimited
lines.
@param hostname: Hostname to connect to for receiving data
@param port: Port to connect to for receiving data
@param storageLevel: Storage level to use for storing the received objects
"""
jlevel = self._sc._getJavaStorageLevel(storageLevel)
return DStream(self._jssc.socketTextStream(hostname, port, jlevel), self,
UTF8Deserializer())
def textFileStream(self, directory):
"""
Create an input stream that monitors a Hadoop-compatible file system
for new files and reads them as text files. Files must be wrriten to the
monitored directory by "moving" them from another location within the same
file system. File names starting with . are ignored.
"""
return DStream(self._jssc.textFileStream(directory), self, UTF8Deserializer())
def binaryRecordsStream(self, directory, recordLength):
"""
Create an input stream that monitors a Hadoop-compatible file system
for new files and reads them as flat binary files with records of
fixed length. Files must be written to the monitored directory by "moving"
them from another location within the same file system.
File names starting with . are ignored.
@param directory: Directory to load data from
@param recordLength: Length of each record in bytes
"""
return DStream(self._jssc.binaryRecordsStream(directory, recordLength), self,
NoOpSerializer())
def _check_serializers(self, rdds):
# make sure they have same serializer
if len(set(rdd._jrdd_deserializer for rdd in rdds)) > 1:
for i in range(len(rdds)):
# reset them to sc.serializer
rdds[i] = rdds[i]._reserialize()
def queueStream(self, rdds, oneAtATime=True, default=None):
"""
Create an input stream from an queue of RDDs or list. In each batch,
it will process either one or all of the RDDs returned by the queue.
NOTE: changes to the queue after the stream is created will not be recognized.
@param rdds: Queue of RDDs
@param oneAtATime: pick one rdd each time or pick all of them once.
@param default: The default rdd if no more in rdds
"""
if default and not isinstance(default, RDD):
default = self._sc.parallelize(default)
if not rdds and default:
rdds = [rdds]
if rdds and not isinstance(rdds[0], RDD):
rdds = [self._sc.parallelize(input) for input in rdds]
self._check_serializers(rdds)
jrdds = ListConverter().convert([r._jrdd for r in rdds],
SparkContext._gateway._gateway_client)
queue = self._jvm.PythonDStream.toRDDQueue(jrdds)
if default:
default = default._reserialize(rdds[0]._jrdd_deserializer)
jdstream = self._jssc.queueStream(queue, oneAtATime, default._jrdd)
else:
jdstream = self._jssc.queueStream(queue, oneAtATime)
return DStream(jdstream, self, rdds[0]._jrdd_deserializer)
def transform(self, dstreams, transformFunc):
"""
Create a new DStream in which each RDD is generated by applying
a function on RDDs of the DStreams. The order of the JavaRDDs in
the transform function parameter will be the same as the order
of corresponding DStreams in the list.
"""
jdstreams = ListConverter().convert([d._jdstream for d in dstreams],
SparkContext._gateway._gateway_client)
# change the final serializer to sc.serializer
func = TransformFunction(self._sc,
lambda t, *rdds: transformFunc(rdds).map(lambda x: x),
*[d._jrdd_deserializer for d in dstreams])
jfunc = self._jvm.TransformFunction(func)
jdstream = self._jssc.transform(jdstreams, jfunc)
return DStream(jdstream, self, self._sc.serializer)
def union(self, *dstreams):
"""
Create a unified DStream from multiple DStreams of the same
type and same slide duration.
"""
if not dstreams:
raise ValueError("should have at least one DStream to union")
if len(dstreams) == 1:
return dstreams[0]
if len(set(s._jrdd_deserializer for s in dstreams)) > 1:
raise ValueError("All DStreams should have same serializer")
if len(set(s._slideDuration for s in dstreams)) > 1:
raise ValueError("All DStreams should have same slide duration")
first = dstreams[0]
jrest = ListConverter().convert([d._jdstream for d in dstreams[1:]],
SparkContext._gateway._gateway_client)
return DStream(self._jssc.union(first._jdstream, jrest), self, first._jrdd_deserializer)