Apache Spark - A unified analytics engine for large-scale data processing
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linweizhong 25b2f95fe3 [SPARK-7339] [PYSPARK] PySpark shuffle spill memory sometimes are not correct
In PySpark we get memory used before and after spill, then use the difference of these two value as memorySpilled, but if the before value is small than after value, then we will get a negative value, but this scenario 0 value may be more reasonable.

Below is the result in HistoryServer we have tested:
Index	ID	Attempt	Status	Locality Level	Executor ID / Host	Launch Time	Duration	GC Time	Input Size / Records	Write Time	Shuffle Write Size / Records	Shuffle Spill (Memory)	Shuffle Spill (Disk)	Errors
0	0	0	SUCCESS	NODE_LOCAL	3 / vm119	2015/05/04 17:31:06	21 s	0.1 s	128.1 MB (hadoop) / 3237	70 ms	10.1 MB / 2529	0.0 B	5.7 MB
2	2	0	SUCCESS	NODE_LOCAL	1 / vm118	2015/05/04 17:31:06	22 s	89 ms	128.1 MB (hadoop) / 3205	0.1 s	10.1 MB / 2529	-1048576.0 B	5.9 MB
1	1	0	SUCCESS	NODE_LOCAL	2 / vm117	2015/05/04 17:31:06	22 s	0.1 s	128.1 MB (hadoop) / 3271	68 ms	10.1 MB / 2529	-1048576.0 B	5.6 MB
4	4	0	SUCCESS	NODE_LOCAL	2 / vm117	2015/05/04 17:31:06	22 s	0.1 s	128.1 MB (hadoop) / 3192	51 ms	10.1 MB / 2529	-1048576.0 B	5.9 MB
3	3	0	SUCCESS	NODE_LOCAL	3 / vm119	2015/05/04 17:31:06	22 s	0.1 s	128.1 MB (hadoop) / 3262	51 ms	10.1 MB / 2529	1024.0 KB	5.8 MB
5	5	0	SUCCESS	NODE_LOCAL	1 / vm118	2015/05/04 17:31:06	22 s	89 ms	128.1 MB (hadoop) / 3256	93 ms	10.1 MB / 2529	-1048576.0 B	5.7 MB

/cc davies

Author: linweizhong <linweizhong@huawei.com>

Closes #5887 from Sephiroth-Lin/spark-7339 and squashes the following commits:

9186c81 [linweizhong] Use max function to get a nonnegative value
d41672b [linweizhong] Update MemoryBytesSpilled when memorySpilled > 0

(cherry picked from commit 8948ad3fb5)
Signed-off-by: Davies Liu <davies@databricks.com>
2015-05-26 08:36:08 -07:00
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build SPARK-5856: In Maven build script, launch Zinc with more memory 2015-02-17 10:10:01 -08:00
conf [SPARK-2691] [MESOS] Support for Mesos DockerInfo 2015-05-01 18:41:22 -07:00
core [CORE] [TEST] Fix SimpleDateParamTest 2015-05-26 08:43:36 -05:00
data/mllib [SPARK-7574] [ML] [DOC] User guide for OneVsRest 2015-05-22 13:18:16 -07:00
dev [SPARK-7832] [Build] Always run SQL tests in master build. 2015-05-25 18:24:07 -07:00
docker [SPARK-2691] [MESOS] Support for Mesos DockerInfo 2015-05-01 18:41:22 -07:00
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project [SPARK-7805] [SQL] Move SQLTestUtils.scala and ParquetTest.scala to src/test 2015-05-24 09:51:49 -07:00
python [SPARK-7339] [PYSPARK] PySpark shuffle spill memory sometimes are not correct 2015-05-26 08:36:08 -07:00
R [SPARK-6811] Copy SparkR lib in make-distribution.sh 2015-05-23 00:04:32 -07:00
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sbt Adde LICENSE Header to build/mvn, build/sbt and sbt/sbt 2014-12-29 10:48:53 -08:00
sql [SQL][minor] Removed unused Catalyst logical plan DSL. 2015-05-25 23:09:28 -07:00
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.gitattributes [SPARK-3870] EOL character enforcement 2014-10-31 12:39:52 -07:00
.gitignore [MINOR] Ignore python/lib/pyspark.zip 2015-05-08 14:06:08 -07:00
.rat-excludes [WEBUI] Remove debug feature for vis.js 2015-05-08 14:06:44 -07:00
CHANGES.txt CHANGES.txt updates 2015-05-19 02:32:53 -07:00
CONTRIBUTING.md [SPARK-6889] [DOCS] CONTRIBUTING.md updates to accompany contribution doc updates 2015-04-21 22:34:31 -07:00
LICENSE [BUILD] update jblas dependency version to 1.2.4 2015-05-16 18:17:59 +01:00
make-distribution.sh [HOTFIX] Copy SparkR lib if it exists in make-distribution 2015-05-23 12:28:24 -07:00
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scalastyle-config.xml [SPARK-6428] Turn on explicit type checking for public methods. 2015-04-03 01:25:02 -07:00
tox.ini [SPARK-7427] [PYSPARK] Make sharedParams match in Scala, Python 2015-05-10 19:18:48 -07:00

Apache Spark

Spark is a fast and general cluster computing system for Big Data. It provides high-level APIs in Scala, Java, and Python, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and structured data processing, MLlib for machine learning, GraphX for graph processing, and Spark Streaming for stream processing.

http://spark.apache.org/

Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page and project wiki. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.) More detailed documentation is available from the project site, at "Building Spark".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1000:

scala> sc.parallelize(1 to 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1000:

>>> sc.parallelize(range(1000)).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn-cluster" or "yarn-client" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run all automated tests.

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions. See also "Third Party Hadoop Distributions" for guidance on building a Spark application that works with a particular distribution.

Configuration

Please refer to the Configuration guide in the online documentation for an overview on how to configure Spark.