Apache Spark - A unified analytics engine for large-scale data processing
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edorigatti 3e5b4ae63a [SPARK-23754][PYTHON][FOLLOWUP] Move UDF stop iteration wrapping from driver to executor
## What changes were proposed in this pull request?
SPARK-23754 was fixed in #21383 by changing the UDF code to wrap the user function, but this required a hack to save its argspec. This PR reverts this change and fixes the `StopIteration` bug in the worker

## How does this work?

The root of the problem is that when an user-supplied function raises a `StopIteration`, pyspark might stop processing data, if this function is used in a for-loop. The solution is to catch `StopIteration`s exceptions and re-raise them as `RuntimeError`s, so that the execution fails and the error is reported to the user. This is done using the `fail_on_stopiteration` wrapper, in different ways depending on where the function is used:
 - In RDDs, the user function is wrapped in the driver, because this function is also called in the driver itself.
 - In SQL UDFs, the function is wrapped in the worker, since all processing happens there. Moreover, the worker needs the signature of the user function, which is lost when wrapping it, but passing this signature to the worker requires a not so nice hack.

## How was this patch tested?

Same tests, plus tests for pandas UDFs

Author: edorigatti <emilio.dorigatti@gmail.com>

Closes #21467 from e-dorigatti/fix_udf_hack.
2018-06-11 10:15:42 +08:00
.github [SPARK-18073][DOCS][WIP] Migrate wiki to spark.apache.org web site 2016-11-23 11:25:47 +00:00
assembly [SPARK-23807][BUILD] Add Hadoop 3.1 profile with relevant POM fix ups 2018-04-24 09:57:09 -07:00
bin [SPARK-23984][K8S] Initial Python Bindings for PySpark on K8s 2018-06-08 11:18:34 -07:00
build [SPARK-19810][BUILD][CORE] Remove support for Scala 2.10 2017-07-13 17:06:24 +08:00
common [SPARK-24356][CORE] Duplicate strings in File.path managed by FileSegmentManagedBuffer 2018-06-02 23:07:39 -05:00
conf [SPARK-22466][SPARK SUBMIT] export SPARK_CONF_DIR while conf is default 2017-11-09 14:33:08 +09:00
core [SPARK-23984][K8S] Initial Python Bindings for PySpark on K8s 2018-06-08 11:18:34 -07:00
data [SPARK-23205][ML] Update ImageSchema.readImages to correctly set alpha values for four-channel images 2018-01-25 18:15:29 -06:00
dev [SPARK-23010][K8S] Initial checkin of k8s integration tests. 2018-06-08 15:15:24 -07:00
docs [SPARK-23984][K8S] Initial Python Bindings for PySpark on K8s 2018-06-08 11:18:34 -07:00
examples [SPARK-23984][K8S] Initial Python Bindings for PySpark on K8s 2018-06-08 11:18:34 -07:00
external [SPARK-24332][SS][MESOS] Fix places reading 'spark.network.timeout' as milliseconds 2018-05-24 13:00:24 -07:00
graphx [SPARK-23028] Bump master branch version to 2.4.0-SNAPSHOT 2018-01-13 00:37:59 +08:00
hadoop-cloud [SPARK-23807][BUILD] Add Hadoop 3.1 profile with relevant POM fix ups 2018-04-24 09:57:09 -07:00
launcher [SPARK-22941][CORE] Do not exit JVM when submit fails with in-process launcher. 2018-04-11 10:13:44 -05:00
licenses [SPARK-19112][CORE] Support for ZStandard codec 2017-11-01 14:54:08 +01:00
mllib [SPARK-15784] Add Power Iteration Clustering to spark.ml 2018-06-04 21:24:35 -07:00
mllib-local [SPARK-23085][ML] API parity for mllib.linalg.Vectors.sparse 2018-01-19 09:28:35 -06:00
project [SPARK-24419][BUILD] Upgrade SBT to 0.13.17 with Scala 2.10.7 for JDK9+ 2018-05-30 05:18:18 -07:00
python [SPARK-23754][PYTHON][FOLLOWUP] Move UDF stop iteration wrapping from driver to executor 2018-06-11 10:15:42 +08:00
R [SPARK-24187][R][SQL] Add array_join function to SparkR 2018-06-06 08:31:35 +07:00
repl [SPARK-16451][REPL] Fail shell if SparkSession fails to start. 2018-06-05 08:29:29 +07:00
resource-managers [SPARK-23010][K8S] Initial checkin of k8s integration tests. 2018-06-08 15:15:24 -07:00
sbin [PYSPARK] Update py4j to version 0.10.7. 2018-05-09 10:47:35 -07:00
sql [SPARK-24468][SQL] Handle negative scale when adjusting precision for decimal operations 2018-06-08 18:51:56 -07:00
streaming [SPARK-23991][DSTREAMS] Fix data loss when WAL write fails in allocateBlocksToBatch 2018-05-29 20:10:59 +08:00
tools [SPARK-23028] Bump master branch version to 2.4.0-SNAPSHOT 2018-01-13 00:37:59 +08:00
.gitattributes [SPARK-3870] EOL character enforcement 2014-10-31 12:39:52 -07:00
.gitignore [SPARK-23572][DOCS] Bring "security.md" up to date. 2018-03-26 12:45:45 -07:00
.travis.yml [SPARK-18278][SCHEDULER] Spark on Kubernetes - Basic Scheduler Backend 2017-11-28 23:02:09 -08:00
appveyor.yml [SPARK-22817][R] Use fixed testthat version for SparkR tests in AppVeyor 2017-12-17 14:40:41 +09:00
CONTRIBUTING.md [SPARK-18073][DOCS][WIP] Migrate wiki to spark.apache.org web site 2016-11-23 11:25:47 +00:00
LICENSE [PYSPARK] Update py4j to version 0.10.7. 2018-05-09 10:47:35 -07:00
NOTICE [SPARK-18278][SCHEDULER] Spark on Kubernetes - Basic Scheduler Backend 2017-11-28 23:02:09 -08:00
pom.xml [SPARK-23010][K8S] Initial checkin of k8s integration tests. 2018-06-08 15:15:24 -07:00
README.md [SPARK-23010][K8S] Initial checkin of k8s integration tests. 2018-06-08 15:15:24 -07:00
scalastyle-config.xml [SPARK-23550][CORE] Cleanup Utils. 2018-03-07 13:42:06 -08:00

Apache Spark

Spark is a fast and general cluster computing system for Big Data. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Spark Streaming for stream processing.

http://spark.apache.org/

Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

build/mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.)

You can build Spark using more than one thread by using the -T option with Maven, see "Parallel builds in Maven 3". More detailed documentation is available from the project site, at "Building Spark".

For general development tips, including info on developing Spark using an IDE, see "Useful Developer Tools".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1000:

scala> sc.parallelize(1 to 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1000:

>>> sc.parallelize(range(1000)).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

There is also a Kubernetes integration test, see resource-managers/kubernetes/integration-tests/README.md

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions.

Configuration

Please refer to the Configuration Guide in the online documentation for an overview on how to configure Spark.

Contributing

Please review the Contribution to Spark guide for information on how to get started contributing to the project.