spark-instrumented-optimizer/R/check-cran.sh
Shivaram Venkataraman c33e4b0d96 [SPARK-16507][SPARKR] Add a CRAN checker, fix Rd aliases
## What changes were proposed in this pull request?

Add a check-cran.sh script that runs `R CMD check` as CRAN. Also fixes a number of issues pointed out by the check. These include
- Updating `DESCRIPTION` to be appropriate
- Adding a .Rbuildignore to ignore lintr, src-native, html that are non-standard files / dirs
- Adding aliases to all S4 methods in DataFrame, Column, GroupedData etc.  This is required as stated in https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Documenting-S4-classes-and-methods
- Other minor fixes

## How was this patch tested?

SparkR unit tests, running the above mentioned script

Author: Shivaram Venkataraman <shivaram@cs.berkeley.edu>

Closes #14173 from shivaram/sparkr-cran-changes.
2016-07-16 17:06:44 -07:00

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#!/bin/bash
#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
set -o pipefail
set -e
FWDIR="$(cd `dirname $0`; pwd)"
pushd $FWDIR > /dev/null
if [ ! -z "$R_HOME" ]
then
R_SCRIPT_PATH="$R_HOME/bin"
else
# if system wide R_HOME is not found, then exit
if [ ! `command -v R` ]; then
echo "Cannot find 'R_HOME'. Please specify 'R_HOME' or make sure R is properly installed."
exit 1
fi
R_SCRIPT_PATH="$(dirname $(which R))"
fi
echo "USING R_HOME = $R_HOME"
# Build the latest docs
$FWDIR/create-docs.sh
# Build a zip file containing the source package
"$R_SCRIPT_PATH/"R CMD build $FWDIR/pkg
# Run check as-cran.
# TODO(shivaram): Remove the skip tests once we figure out the install mechanism
VERSION=`grep Version $FWDIR/pkg/DESCRIPTION | awk '{print $NF}'`
"$R_SCRIPT_PATH/"R CMD check --as-cran --no-tests SparkR_"$VERSION".tar.gz
popd > /dev/null