Apache Spark - A unified analytics engine for large-scale data processing
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Andrew Or 5030923ea8 [SPARK-12155][SPARK-12253] Fix executor OOM in unified memory management
**Problem.** In unified memory management, acquiring execution memory may lead to eviction of storage memory. However, the space freed from evicting cached blocks is distributed among all active tasks. Thus, an incorrect upper bound on the execution memory per task can cause the acquisition to fail, leading to OOM's and premature spills.

**Example.** Suppose total memory is 1000B, cached blocks occupy 900B, `spark.memory.storageFraction` is 0.4, and there are two active tasks. In this case, the cap on task execution memory is 100B / 2 = 50B. If task A tries to acquire 200B, it will evict 100B of storage but can only acquire 50B because of the incorrect cap. For another example, see this [regression test](https://github.com/andrewor14/spark/blob/fix-oom/core/src/test/scala/org/apache/spark/memory/UnifiedMemoryManagerSuite.scala#L233) that I stole from JoshRosen.

**Solution.** Fix the cap on task execution memory. It should take into account the space that could have been freed by storage in addition to the current amount of memory available to execution. In the example above, the correct cap should have been 600B / 2 = 300B.

This patch also guards against the race condition (SPARK-12253):
(1) Existing tasks collectively occupy all execution memory
(2) New task comes in and blocks while existing tasks spill
(3) After tasks finish spilling, another task jumps in and puts in a large block, stealing the freed memory
(4) New task still cannot acquire memory and goes back to sleep

Author: Andrew Or <andrew@databricks.com>

Closes #10240 from andrewor14/fix-oom.
2015-12-10 15:30:08 -08:00
assembly [SPARK-12023][BUILD] Fix warnings while packaging spark with maven. 2015-11-30 10:11:27 +00:00
bagel [SPARK-10300] [BUILD] [TESTS] Add support for test tags in run-tests.py. 2015-10-07 14:11:21 -07:00
bin [SPARK-12166][TEST] Unset hadoop related environment in testing 2015-12-08 11:05:06 +00:00
build [SPARK-11052] Spaces in the build dir causes failures in the build/mv… 2015-10-13 22:11:08 +01:00
conf [SPARK-11929][CORE] Make the repl log4j configuration override the root logger. 2015-11-24 15:08:02 -06:00
core [SPARK-12155][SPARK-12253] Fix executor OOM in unified memory management 2015-12-10 15:30:08 -08:00
data/mllib [MLLIB] [DOC] Seed fix in mllib naive bayes example 2015-07-18 10:12:48 -07:00
dev [SPARK-12152][PROJECT-INFRA] Speed up Scalastyle checks by only invoking SBT once 2015-12-06 17:35:01 -08:00
docker [SPARK-11491] Update build to use Scala 2.10.5 2015-11-04 16:58:38 -08:00
docker-integration-tests [SPARK-11796] Fix httpclient and httpcore depedency issues related to docker-client 2015-12-09 18:39:36 -08:00
docs [SPARK-12251] Document and improve off-heap memory configurations 2015-12-10 15:29:04 -08:00
ec2 [SPARK-12107][EC2] Update spark-ec2 versions 2015-12-03 11:59:10 -08:00
examples [SPARK-11713] [PYSPARK] [STREAMING] Initial RDD updateStateByKey for PySpark 2015-12-10 14:21:15 -08:00
external [SPARK-12103][STREAMING][KAFKA][DOC] document that K means Key and V … 2015-12-08 11:02:35 +00:00
extras [SPARK-12244][SPARK-12245][STREAMING] Rename trackStateByKey to mapWithState and change tracking function signature 2015-12-09 20:47:15 -08:00
graphx [SPARK-12112][BUILD] Upgrade to SBT 0.13.9 2015-12-05 08:15:30 +08:00
launcher [SPARK-11140][CORE] Transfer files using network lib when using NettyRpcEnv. 2015-11-23 13:54:19 -08:00
licenses [SPARK-10833] [BUILD] Inline, organize BSD/MIT licenses in LICENSE 2015-09-28 22:56:43 -04:00
mllib [SPARK-11602][MLLIB] Refine visibility for 1.6 scala API audit 2015-12-10 10:15:50 -08:00
network [SPARK-6990][BUILD] Add Java linting script; fix minor warnings 2015-12-04 12:03:45 -08:00
project [SPARK-11530][MLLIB] Return eigenvalues with PCA model 2015-12-10 14:05:45 +00:00
python [SPARK-11713] [PYSPARK] [STREAMING] Initial RDD updateStateByKey for PySpark 2015-12-10 14:21:15 -08:00
R [SPARK-12234][SPARKR] Fix ``subset` function error when only set `select`` argument 2015-12-10 10:18:58 -08:00
repl [SPARK-11563][CORE][REPL] Use RpcEnv to transfer REPL-generated classes. 2015-12-10 13:26:30 -08:00
sbin [SPARK-11218][CORE] show help messages for start-slave and start-master 2015-11-09 13:22:05 +01:00
sbt Adde LICENSE Header to build/mvn, build/sbt and sbt/sbt 2014-12-29 10:48:53 -08:00
sql [SPARK-12251] Document and improve off-heap memory configurations 2015-12-10 15:29:04 -08:00
streaming [SPARK-11713] [PYSPARK] [STREAMING] Initial RDD updateStateByKey for PySpark 2015-12-10 14:21:15 -08:00
tags [SPARK-6990][BUILD] Add Java linting script; fix minor warnings 2015-12-04 12:03:45 -08:00
tools [SPARK-11732] Removes some MiMa false positives 2015-11-17 20:51:20 +00:00
unsafe [SPARK-6990][BUILD] Add Java linting script; fix minor warnings 2015-12-04 12:03:45 -08:00
yarn [SPARK-12241][YARN] Improve failure reporting in Yarn client obtainTokenForHBase() 2015-12-09 10:25:38 -08:00
.gitattributes [SPARK-3870] EOL character enforcement 2014-10-31 12:39:52 -07:00
.gitignore [MINOR][BUILD] Ignore ensime cache 2015-11-18 11:35:41 -08:00
.rat-excludes [SPARK-11206] Support SQL UI on the history server (resubmit) 2015-12-03 16:39:12 -08:00
checkstyle-suppressions.xml [SPARK-6990][BUILD] Add Java linting script; fix minor warnings 2015-12-04 12:03:45 -08:00
checkstyle.xml [SPARK-6990][BUILD] Add Java linting script; fix minor warnings 2015-12-04 12:03:45 -08:00
CONTRIBUTING.md [SPARK-6889] [DOCS] CONTRIBUTING.md updates to accompany contribution doc updates 2015-04-21 22:34:31 -07:00
LICENSE [SPARK-11988][ML][MLLIB] Update JPMML to 1.2.7 2015-12-05 15:52:52 +00:00
make-distribution.sh [SPARK-12065] Upgrade Tachyon from 0.8.1 to 0.8.2 2015-12-01 11:49:20 -08:00
NOTICE [SPARK-10833] [BUILD] Inline, organize BSD/MIT licenses in LICENSE 2015-09-28 22:56:43 -04:00
pom.xml [SPARK-11796] Fix httpclient and httpcore depedency issues related to docker-client 2015-12-09 18:39:36 -08:00
pylintrc [SPARK-9116] [SQL] [PYSPARK] support Python only UDT in __main__ 2015-07-29 22:30:49 -07:00
README.md Add links howto to setup IDEs for developing spark 2015-12-04 14:43:16 +00:00
scalastyle-config.xml [SPARK-3873][BUILD] Add style checker to enforce import ordering. 2015-12-08 13:13:56 -08:00
tox.ini [SPARK-7427] [PYSPARK] Make sharedParams match in Scala, Python 2015-05-10 19:18:32 -07:00

Apache Spark

Spark is a fast and general cluster computing system for Big Data. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Spark Streaming for stream processing.

http://spark.apache.org/

Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page and project wiki. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

build/mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.) More detailed documentation is available from the project site, at "Building Spark". For developing Spark using an IDE, see Eclipse and IntelliJ.

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1000:

scala> sc.parallelize(1 to 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1000:

>>> sc.parallelize(range(1000)).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions.

Configuration

Please refer to the Configuration Guide in the online documentation for an overview on how to configure Spark.