spark-instrumented-optimizer/python/pyspark/mllib/common.py

#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements.  See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License.  You may obtain a copy of the License at
#
#    http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#

import py4j.protocol
from py4j.protocol import Py4JJavaError
from py4j.java_gateway import JavaObject
from py4j.java_collections import JavaArray, JavaList

from pyspark import RDD, SparkContext
from pyspark.serializers import PickleSerializer, AutoBatchedSerializer
from pyspark.sql import DataFrame, SQLContext

# Hack for support float('inf') in Py4j
_old_smart_decode = py4j.protocol.smart_decode

_float_str_mapping = {
    'nan': 'NaN',
    'inf': 'Infinity',
    '-inf': '-Infinity',
}


def _new_smart_decode(obj):
    if isinstance(obj, float):
        s = str(obj)
        return _float_str_mapping.get(s, s)
    return _old_smart_decode(obj)

py4j.protocol.smart_decode = _new_smart_decode


_picklable_classes = [
    'LinkedList',
    'SparseVector',
    'DenseVector',
    'DenseMatrix',
    'Rating',
    'LabeledPoint',
]


# this will call the MLlib version of pythonToJava()
def _to_java_object_rdd(rdd):
    """ Return a JavaRDD of Object by unpickling

    It will convert each Python object into Java object by Pyrolite, whenever the
    RDD is serialized in batch or not.
    """
    rdd = rdd._reserialize(AutoBatchedSerializer(PickleSerializer()))
    return rdd.ctx._jvm.org.apache.spark.mllib.api.python.SerDe.pythonToJava(rdd._jrdd, True)


def _py2java(sc, obj):
    """ Convert Python object into Java """
    if isinstance(obj, RDD):
        obj = _to_java_object_rdd(obj)
    elif isinstance(obj, DataFrame):
        obj = obj._jdf
    elif isinstance(obj, SparkContext):
        obj = obj._jsc
    elif isinstance(obj, list):
        obj = [_py2java(sc, x) for x in obj]
    elif isinstance(obj, JavaObject):
        pass
    elif isinstance(obj, (int, float, bool, bytes, str)):
        pass
    else:
        data = bytearray(PickleSerializer().dumps(obj))
        obj = sc._jvm.org.apache.spark.mllib.api.python.SerDe.loads(data)
    return obj


def _java2py(sc, r, encoding="bytes"):
    if isinstance(r, JavaObject):
        clsName = r.getClass().getSimpleName()
        # convert RDD into JavaRDD
        if clsName != 'JavaRDD' and clsName.endswith("RDD"):
            r = r.toJavaRDD()
            clsName = 'JavaRDD'

        if clsName == 'JavaRDD':
            jrdd = sc._jvm.org.apache.spark.mllib.api.python.SerDe.javaToPython(r)
            return RDD(jrdd, sc)

        if clsName == 'Dataset':
            return DataFrame(r, SQLContext.getOrCreate(sc))

        if clsName in _picklable_classes:
            r = sc._jvm.org.apache.spark.mllib.api.python.SerDe.dumps(r)
        elif isinstance(r, (JavaArray, JavaList)):
            try:
                r = sc._jvm.org.apache.spark.mllib.api.python.SerDe.dumps(r)
            except Py4JJavaError:
                pass  # not pickable

    if isinstance(r, (bytearray, bytes)):
        r = PickleSerializer().loads(bytes(r), encoding=encoding)
    return r


def callJavaFunc(sc, func, *args):
    """ Call Java Function """
    args = [_py2java(sc, a) for a in args]
    return _java2py(sc, func(*args))


def callMLlibFunc(name, *args):
    """ Call API in PythonMLLibAPI """
    sc = SparkContext.getOrCreate()
    api = getattr(sc._jvm.PythonMLLibAPI(), name)
    return callJavaFunc(sc, api, *args)


class JavaModelWrapper(object):
    """
    Wrapper for the model in JVM
    """
    def __init__(self, java_model):
        self._sc = SparkContext.getOrCreate()
        self._java_model = java_model

    def __del__(self):
        self._sc._gateway.detach(self._java_model)

    def call(self, name, *a):
        """Call method of java_model"""
        return callJavaFunc(self._sc, getattr(self._java_model, name), *a)


def inherit_doc(cls):
    """
    A decorator that makes a class inherit documentation from its parents.
    """
    for name, func in vars(cls).items():
        # only inherit docstring for public functions
        if name.startswith("_"):
            continue
        if not func.__doc__:
            for parent in cls.__bases__:
                parent_func = getattr(parent, name, None)
                if parent_func and getattr(parent_func, "__doc__", None):
                    func.__doc__ = parent_func.__doc__
                    break
    return cls