Apache Spark - A unified analytics engine for large-scale data processing
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SaurabhChawla 6be8b935a4 [SPARK-32234][SQL] Spark sql commands are failing on selecting the orc tables
### What changes were proposed in this pull request?
Spark sql commands are failing on selecting the orc tables
Steps to reproduce
Example 1 -
Prerequisite -  This is the location(/Users/test/tpcds_scale5data/date_dim) for orc data which is generated by the hive.
```
val table = """CREATE TABLE `date_dim` (
  `d_date_sk` INT,
  `d_date_id` STRING,
  `d_date` TIMESTAMP,
  `d_month_seq` INT,
  `d_week_seq` INT,
  `d_quarter_seq` INT,
  `d_year` INT,
  `d_dow` INT,
  `d_moy` INT,
  `d_dom` INT,
  `d_qoy` INT,
  `d_fy_year` INT,
  `d_fy_quarter_seq` INT,
  `d_fy_week_seq` INT,
  `d_day_name` STRING,
  `d_quarter_name` STRING,
  `d_holiday` STRING,
  `d_weekend` STRING,
  `d_following_holiday` STRING,
  `d_first_dom` INT,
  `d_last_dom` INT,
  `d_same_day_ly` INT,
  `d_same_day_lq` INT,
  `d_current_day` STRING,
  `d_current_week` STRING,
  `d_current_month` STRING,
  `d_current_quarter` STRING,
  `d_current_year` STRING)
USING orc
LOCATION '/Users/test/tpcds_scale5data/date_dim'"""

spark.sql(table).collect

val u = """select date_dim.d_date_id from date_dim limit 5"""

spark.sql(u).collect
```
Example 2

```
  val table = """CREATE TABLE `test_orc_data` (
  `_col1` INT,
  `_col2` STRING,
  `_col3` INT)
  USING orc"""

spark.sql(table).collect

spark.sql("insert into test_orc_data values(13, '155', 2020)").collect

val df = """select _col2 from test_orc_data limit 5"""
spark.sql(df).collect

```

Its Failing with below error
```
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 2.0 failed 1 times, most recent failure: Lost task 0.0 in stage 2.0 (TID 2, 192.168.0.103, executor driver): java.lang.ArrayIndexOutOfBoundsException: 1
    at org.apache.spark.sql.execution.datasources.orc.OrcColumnarBatchReader.initBatch(OrcColumnarBatchReader.java:156)
    at org.apache.spark.sql.execution.datasources.orc.OrcFileFormat.$anonfun$buildReaderWithPartitionValues$7(OrcFileFormat.scala:258)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.org$apache$spark$sql$execution$datasources$FileScanRDD$$anon$$readCurrentFile(FileScanRDD.scala:141)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:203)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:116)
    at org.apache.spark.sql.execution.FileSourceScanExec$$anon$1.hasNext(DataSourceScanExec.scala:620)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.columnartorow_nextBatch_0$(Unknown Source)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source)
    at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
    at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729)
    at org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:343)
    at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:895)
    at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:895)
    at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
    at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:372)
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:336)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
    at org.apache.spark.scheduler.Task.run(Task.scala:133)
    at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:445)
    at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1489)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:448)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)`
```

The reason behind this initBatch is not getting the schema that is needed to find out the column value in OrcFileFormat.scala
```
batchReader.initBatch(
 TypeDescription.fromString(resultSchemaString)
```

### Why are the changes needed?
Spark sql queries for orc tables are failing

### Does this PR introduce _any_ user-facing change?
No

### How was this patch tested?
Unit test is added for this .Also Tested through spark shell and spark submit the failing queries

Closes #29045 from SaurabhChawla100/SPARK-32234.

Lead-authored-by: SaurabhChawla <saurabhc@qubole.com>
Co-authored-by: SaurabhChawla <s.saurabhtim@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-07-16 13:11:47 +00:00
.github [SPARK-32316][TESTS][INFRA] Test PySpark with Python 3.8 in Github Actions 2020-07-14 20:44:09 -07:00
assembly [SPARK-30950][BUILD] Setting version to 3.1.0-SNAPSHOT 2020-02-25 19:44:31 -08:00
bin [SPARK-31934][BUILD] Remove set -x from docker image tool 2020-06-08 16:03:13 -07:00
build [SPARK-31041][BUILD] Show Maven errors from within make-distribution.sh 2020-03-11 08:22:02 -05:00
common [SPARK-32036] Replace references to blacklist/whitelist language with more appropriate terminology, excluding the blacklisting feature 2020-07-15 11:40:55 -05:00
conf [SPARK-32004][ALL] Drop references to slave 2020-07-13 14:05:33 -07:00
core [SPARK-32125][UI] Support get taskList by status in Web UI and SHS Rest API 2020-07-16 11:31:24 +08:00
data [SPARK-22666][ML][SQL] Spark datasource for image format 2018-09-05 11:59:00 -07:00
dev [SPARK-32036] Replace references to blacklist/whitelist language with more appropriate terminology, excluding the blacklisting feature 2020-07-15 11:40:55 -05:00
docs [SPARK-32272][SQL] Add SQL standard command SET TIME ZONE 2020-07-16 13:01:53 +00:00
examples [SPARK-29292][SQL][ML] Update rest of default modules (Hive, ML, etc) for Scala 2.13 compilation 2020-07-15 13:26:28 -07:00
external [SPARK-29292][SQL][ML] Update rest of default modules (Hive, ML, etc) for Scala 2.13 compilation 2020-07-15 13:26:28 -07:00
graphx [SPARK-30950][BUILD] Setting version to 3.1.0-SNAPSHOT 2020-02-25 19:44:31 -08:00
hadoop-cloud [SPARK-30950][BUILD] Setting version to 3.1.0-SNAPSHOT 2020-02-25 19:44:31 -08:00
launcher [SPARK-30950][BUILD] Setting version to 3.1.0-SNAPSHOT 2020-02-25 19:44:31 -08:00
licenses [SPARK-31967][UI] Downgrade to vis.js 4.21.0 to fix Jobs UI loading time regression 2020-06-12 17:22:41 -07:00
licenses-binary [SPARK-31967][UI] Downgrade to vis.js 4.21.0 to fix Jobs UI loading time regression 2020-06-12 17:22:41 -07:00
mllib [SPARK-29292][SQL][ML] Update rest of default modules (Hive, ML, etc) for Scala 2.13 compilation 2020-07-15 13:26:28 -07:00
mllib-local [SPARK-30699][ML][PYSPARK] GMM blockify input vectors 2020-05-12 12:54:03 +08:00
project [SPARK-32036] Replace references to blacklist/whitelist language with more appropriate terminology, excluding the blacklisting feature 2020-07-15 11:40:55 -05:00
python [SPARK-32140][ML][PYSPARK] Add training summary to FMClassificationModel 2020-07-15 10:13:03 -07:00
R [SPARK-32036] Replace references to blacklist/whitelist language with more appropriate terminology, excluding the blacklisting feature 2020-07-15 11:40:55 -05:00
repl [SPARK-31399][CORE][TEST-HADOOP3.2][TEST-JAVA11] Support indylambda Scala closure in ClosureCleaner 2020-05-18 05:32:57 +00:00
resource-managers [SPARK-32036] Replace references to blacklist/whitelist language with more appropriate terminology, excluding the blacklisting feature 2020-07-15 11:40:55 -05:00
sbin [SPARK-32004][ALL] Drop references to slave 2020-07-13 14:05:33 -07:00
sql [SPARK-32234][SQL] Spark sql commands are failing on selecting the orc tables 2020-07-16 13:11:47 +00:00
streaming [SPARK-32036] Replace references to blacklist/whitelist language with more appropriate terminology, excluding the blacklisting feature 2020-07-15 11:40:55 -05:00
tools [SPARK-30950][BUILD] Setting version to 3.1.0-SNAPSHOT 2020-02-25 19:44:31 -08:00
.asf.yaml [SPARK-31352] Add .asf.yaml to control Github settings 2020-04-06 09:06:01 -05:00
.gitattributes [SPARK-30653][INFRA][SQL] EOL character enforcement for java/scala/xml/py/R files 2020-01-27 10:20:51 -08:00
.gitignore Revert "[SPARK-30879][DOCS] Refine workflow for building docs" 2020-03-31 16:11:59 +09:00
appveyor.yml [MINOR][INFRA][R] Show the installed packages in R in a prettier way 2020-07-08 07:50:07 -07:00
CONTRIBUTING.md [MINOR][DOCS] Tighten up some key links to the project and download pages to use HTTPS 2019-05-21 10:56:42 -07:00
LICENSE [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
LICENSE-binary [SPARK-30695][BUILD] Upgrade Apache ORC to 1.5.9 2020-01-31 17:41:27 -08:00
NOTICE [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
NOTICE-binary [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
pom.xml [SPARK-32305][BUILD] Make mvn clean remove metastore_db and spark-warehouse 2020-07-14 12:40:47 -07:00
README.md [MINOR][DOCS] Fix Jenkins build image and link in README.md 2020-01-20 23:08:24 -08:00
scalastyle-config.xml [SPARK-30030][INFRA] Use RegexChecker instead of TokenChecker to check org.apache.commons.lang. 2019-11-25 12:03:15 -08:00

Apache Spark

Spark is a unified analytics engine for large-scale data processing. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing.

https://spark.apache.org/

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Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

./build/mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.)

More detailed documentation is available from the project site, at "Building Spark".

For general development tips, including info on developing Spark using an IDE, see "Useful Developer Tools".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1,000,000,000:

scala> spark.range(1000 * 1000 * 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1,000,000,000:

>>> spark.range(1000 * 1000 * 1000).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

There is also a Kubernetes integration test, see resource-managers/kubernetes/integration-tests/README.md

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version and Enabling YARN" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions.

Configuration

Please refer to the Configuration Guide in the online documentation for an overview on how to configure Spark.

Contributing

Please review the Contribution to Spark guide for information on how to get started contributing to the project.