spark-instrumented-optimizer/python/pyspark/sql/avro/functions.py
Dongjoon Hyun a0d807d5ab [SPARK-26856][PYSPARK][FOLLOWUP] Fix UT failure due to wrong patterns for Kinesis assembly
## What changes were proposed in this pull request?

After [SPARK-26856](https://github.com/apache/spark/pull/23797), `Kinesis` Python UT fails with `Found multiple JARs` exception due to a wrong pattern.

- https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/104171/console
```
Exception: Found multiple JARs:
.../spark-streaming-kinesis-asl-assembly-3.0.0-SNAPSHOT.jar,
.../spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT.jar;
please remove all but one
```

It's because the pattern was changed in a wrong way.

**Original**
```python
kinesis_asl_assembly_dir, "target/scala-*/%s-*.jar" % name_prefix))
kinesis_asl_assembly_dir, "target/%s_*.jar" % name_prefix))
```
**After SPARK-26856**
```python
project_full_path, "target/scala-*/%s*.jar" % jar_name_prefix))
project_full_path, "target/%s*.jar" % jar_name_prefix))
```

The actual kinesis assembly jar files look like the followings.

**SBT Build**
```
-rw-r--r--  1 dongjoon  staff  87459461 Apr  1 19:01 spark-streaming-kinesis-asl-assembly-3.0.0-SNAPSHOT.jar
-rw-r--r--  1 dongjoon  staff       309 Apr  1 18:58 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT-tests.jar
-rw-r--r--  1 dongjoon  staff       309 Apr  1 18:58 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT.jar
```

**MAVEN Build**
```
-rw-r--r--   1 dongjoon  staff   8.6K Apr  1 18:55 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT-sources.jar
-rw-r--r--   1 dongjoon  staff   8.6K Apr  1 18:55 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT-test-sources.jar
-rw-r--r--   1 dongjoon  staff   8.7K Apr  1 18:55 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT-tests.jar
-rw-r--r--   1 dongjoon  staff    21M Apr  1 18:55 spark-streaming-kinesis-asl-assembly_2.12-3.0.0-SNAPSHOT.jar
```

In addition, after SPARK-26856, the utility function `search_jar` is shared to find `avro` jar files which are identical for both `sbt` and `mvn`. To sum up, The current jar pattern parameter cannot handle both `kinesis` and `avro` jars. This PR splits the single pattern into two patterns.

## How was this patch tested?

Manual. Please note that this will remove only `Found multiple JARs` exception. Kinesis tests need more configurations to run locally.
```
$ build/sbt -Pkinesis-asl test:package streaming-kinesis-asl-assembly/assembly
$ export ENABLE_KINESIS_TESTS=1
$ python/run-tests.py --python-executables python2.7 --module pyspark-streaming
```

Closes #24268 from dongjoon-hyun/SPARK-26856.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-04-02 14:52:56 +09:00

135 lines
5 KiB
Python

#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
"""
A collections of builtin avro functions
"""
from pyspark import since, SparkContext
from pyspark.rdd import ignore_unicode_prefix
from pyspark.sql.column import Column, _to_java_column
from pyspark.util import _print_missing_jar
@ignore_unicode_prefix
@since(3.0)
def from_avro(data, jsonFormatSchema, options={}):
"""
Converts a binary column of avro format into its corresponding catalyst value. The specified
schema must match the read data, otherwise the behavior is undefined: it may fail or return
arbitrary result.
Note: Avro is built-in but external data source module since Spark 2.4. Please deploy the
application as per the deployment section of "Apache Avro Data Source Guide".
:param data: the binary column.
:param jsonFormatSchema: the avro schema in JSON string format.
:param options: options to control how the Avro record is parsed.
>>> from pyspark.sql import Row
>>> from pyspark.sql.avro.functions import from_avro, to_avro
>>> data = [(1, Row(name='Alice', age=2))]
>>> df = spark.createDataFrame(data, ("key", "value"))
>>> avroDf = df.select(to_avro(df.value).alias("avro"))
>>> avroDf.collect()
[Row(avro=bytearray(b'\\x00\\x00\\x04\\x00\\nAlice'))]
>>> jsonFormatSchema = '''{"type":"record","name":"topLevelRecord","fields":
... [{"name":"avro","type":[{"type":"record","name":"value","namespace":"topLevelRecord",
... "fields":[{"name":"age","type":["long","null"]},
... {"name":"name","type":["string","null"]}]},"null"]}]}'''
>>> avroDf.select(from_avro(avroDf.avro, jsonFormatSchema).alias("value")).collect()
[Row(value=Row(avro=Row(age=2, name=u'Alice')))]
"""
sc = SparkContext._active_spark_context
try:
jc = sc._jvm.org.apache.spark.sql.avro.functions.from_avro(
_to_java_column(data), jsonFormatSchema, options)
except TypeError as e:
if str(e) == "'JavaPackage' object is not callable":
_print_missing_jar("Avro", "avro", "avro", sc.version)
raise
return Column(jc)
@ignore_unicode_prefix
@since(3.0)
def to_avro(data):
"""
Converts a column into binary of avro format.
Note: Avro is built-in but external data source module since Spark 2.4. Please deploy the
application as per the deployment section of "Apache Avro Data Source Guide".
:param data: the data column.
>>> from pyspark.sql import Row
>>> from pyspark.sql.avro.functions import to_avro
>>> data = [(1, Row(name='Alice', age=2))]
>>> df = spark.createDataFrame(data, ("key", "value"))
>>> df.select(to_avro(df.value).alias("avro")).collect()
[Row(avro=bytearray(b'\\x00\\x00\\x04\\x00\\nAlice'))]
"""
sc = SparkContext._active_spark_context
try:
jc = sc._jvm.org.apache.spark.sql.avro.functions.to_avro(_to_java_column(data))
except TypeError as e:
if str(e) == "'JavaPackage' object is not callable":
_print_missing_jar("Avro", "avro", "avro", sc.version)
raise
return Column(jc)
def _test():
import os
import sys
from pyspark.testing.utils import search_jar
avro_jar = search_jar("external/avro", "spark-avro", "spark-avro")
if avro_jar is None:
print(
"Skipping all Avro Python tests as the optional Avro project was "
"not compiled into a JAR. To run these tests, "
"you need to build Spark with 'build/sbt -Pavro package' or "
"'build/mvn -Pavro package' before running this test.")
sys.exit(0)
else:
existing_args = os.environ.get("PYSPARK_SUBMIT_ARGS", "pyspark-shell")
jars_args = "--jars %s" % avro_jar
os.environ["PYSPARK_SUBMIT_ARGS"] = " ".join([jars_args, existing_args])
import doctest
from pyspark.sql import Row, SparkSession
import pyspark.sql.avro.functions
globs = pyspark.sql.avro.functions.__dict__.copy()
spark = SparkSession.builder\
.master("local[4]")\
.appName("sql.avro.functions tests")\
.getOrCreate()
globs['spark'] = spark
(failure_count, test_count) = doctest.testmod(
pyspark.sql.avro.functions, globs=globs,
optionflags=doctest.ELLIPSIS | doctest.NORMALIZE_WHITESPACE)
spark.stop()
if failure_count:
sys.exit(-1)
if __name__ == "__main__":
_test()