Apache Spark - A unified analytics engine for large-scale data processing
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Bruce Robbins 8cc591c91a [SPARK-25164][SQL] Avoid rebuilding column and path list for each column in parquet reader
## What changes were proposed in this pull request?

VectorizedParquetRecordReader::initializeInternal rebuilds the column list and path list once for each column. Therefore, it indirectly iterates 2\*colCount\*colCount times for each parquet file.

This inefficiency impacts jobs that read parquet-backed tables with many columns and many files. Jobs that read tables with few columns or few files are not impacted.

This PR changes initializeInternal so that it builds each list only once.

I ran benchmarks on my laptop with 1 worker thread, running this query:
<pre>
sql("select * from parquet_backed_table where id1 = 1").collect
</pre>
There are roughly one matching row for every 425 rows, and the matching rows are sprinkled pretty evenly throughout the table (that is, every page for column <code>id1</code> has at least one matching row).

6000 columns, 1 million rows, 67 32M files:

master | branch | improvement
-------|---------|-----------
10.87 min | 6.09 min | 44%

6000 columns, 1 million rows, 23 98m files:

master | branch | improvement
-------|---------|-----------
7.39 min | 5.80 min | 21%

600 columns 10 million rows, 67 32M files:

master | branch | improvement
-------|---------|-----------
1.95 min | 1.96 min | -0.5%

60 columns, 100 million rows, 67 32M files:

master | branch | improvement
-------|---------|-----------
0.55 min | 0.55 min | 0%

## How was this patch tested?

- sql unit tests
- pyspark-sql tests

Closes #22188 from bersprockets/SPARK-25164.

Authored-by: Bruce Robbins <bersprockets@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-08-23 14:52:23 +08:00
.github [SPARK-18073][DOCS][WIP] Migrate wiki to spark.apache.org web site 2016-11-23 11:25:47 +00:00
assembly [SPARK-25015][BUILD] Update Hadoop 2.7 to 2.7.7 2018-08-04 14:59:13 -05:00
bin [SPARK-24433][K8S] Initial R Bindings for SparkR on K8s 2018-08-17 16:04:02 -07:00
build [SPARK-24533] Typesafe rebranded to lightbend. Changing the build downloads path 2018-06-27 14:37:24 -07:00
common [SPARK-24296][CORE] Replicate large blocks as a stream. 2018-08-21 11:26:41 -07:00
conf [SPARK-22466][SPARK SUBMIT] export SPARK_CONF_DIR while conf is default 2017-11-09 14:33:08 +09:00
core [SPARK-25163][SQL] Fix flaky test: o.a.s.util.collection.ExternalAppendOnlyMapSuiteCheck 2018-08-22 14:17:05 -07:00
data [SPARK-23205][ML] Update ImageSchema.readImages to correctly set alpha values for four-channel images 2018-01-25 18:15:29 -06:00
dev [SPARK-23698][PYTHON] Resolve undefined names in Python 3 2018-08-22 10:06:59 -07:00
docs [SPARK-25133][SQL][DOC] Avro data source guide 2018-08-23 13:45:49 +08:00
examples Fix typos detected by github.com/client9/misspell 2018-08-11 21:23:36 -05:00
external [SPARK-23034][SQL] Show RDD/relation names in RDD/Hive table scan nodes 2018-08-23 14:26:10 +08:00
graphx [SPARK-25149][GRAPHX] Update Parallel Personalized Page Rank to test with large vertexIds 2018-08-21 15:21:55 -07:00
hadoop-cloud [SPARK-23807][BUILD] Add Hadoop 3.1 profile with relevant POM fix ups 2018-04-24 09:57:09 -07:00
launcher [SPARK-25001][BUILD] Fix miscellaneous build warnings 2018-08-04 11:52:49 -05:00
licenses [SPARK-24654][BUILD] Update, fix LICENSE and NOTICE, and specialize for source vs binary 2018-06-30 19:27:16 -05:00
licenses-binary [SPARK-23654][BUILD] remove jets3t as a dependency of spark 2018-08-16 12:34:23 -07:00
mllib [SPARK-25093][SQL] Avoid recompiling regexp for comments multiple times 2018-08-22 14:31:51 +08:00
mllib-local [SPARK-23085][ML] API parity for mllib.linalg.Vectors.sparse 2018-01-19 09:28:35 -06:00
project [SPARK-24296][CORE] Replicate large blocks as a stream. 2018-08-21 11:26:41 -07:00
python [SPARK-25105][PYSPARK][SQL] Include PandasUDFType in the import all of pyspark.sql.functions 2018-08-22 10:16:47 -07:00
R [SPARK-25167][SPARKR][TEST][MINOR] Minor fixes for R sql tests 2018-08-23 10:56:17 +08:00
repl [SPARK-24785][SHELL] Making sure REPL prints Spark UI info and then Welcome message 2018-08-22 23:14:56 +00:00
resource-managers [SPARK-24433][K8S] Initial R Bindings for SparkR on K8s 2018-08-17 16:04:02 -07:00
sbin [PYSPARK] Update py4j to version 0.10.7. 2018-05-09 10:47:35 -07:00
sql [SPARK-25164][SQL] Avoid rebuilding column and path list for each column in parquet reader 2018-08-23 14:52:23 +08:00
streaming [SPARK-25093][SQL] Avoid recompiling regexp for comments multiple times 2018-08-22 14:31:51 +08:00
tools [SPARK-23028] Bump master branch version to 2.4.0-SNAPSHOT 2018-01-13 00:37:59 +08:00
.gitattributes [SPARK-3870] EOL character enforcement 2014-10-31 12:39:52 -07:00
.gitignore [MINOR] Add .crc files to .gitignore 2018-08-22 01:00:06 +08:00
.travis.yml [SPARK-18278][SCHEDULER] Spark on Kubernetes - Basic Scheduler Backend 2017-11-28 23:02:09 -08:00
appveyor.yml [MINOR][BUILD] Remove -Phive-thriftserver profile within appveyor.yml 2018-07-30 10:01:18 +08:00
CONTRIBUTING.md [SPARK-18073][DOCS][WIP] Migrate wiki to spark.apache.org web site 2016-11-23 11:25:47 +00:00
LICENSE [SPARK-24654][BUILD] Update, fix LICENSE and NOTICE, and specialize for source vs binary 2018-06-30 19:27:16 -05:00
LICENSE-binary [SPARK-23654][BUILD] remove jets3t as a dependency of spark 2018-08-16 12:34:23 -07:00
NOTICE [SPARK-23654][BUILD] remove jets3t as a dependency of spark 2018-08-16 12:34:23 -07:00
NOTICE-binary [SPARK-23654][BUILD] remove jets3t as a dependency of spark 2018-08-16 12:34:23 -07:00
pom.xml [SPARK-25137][SPARK SHELL] NumberFormatException` when starting spark-shell from Mac terminal 2018-08-18 17:19:29 +08:00
README.md [SPARK-23010][K8S] Initial checkin of k8s integration tests. 2018-06-08 15:15:24 -07:00
scalastyle-config.xml [SPARK-24919][BUILD] New linter rule for sparkContext.hadoopConfiguration 2018-07-26 16:50:59 -07:00

Apache Spark

Spark is a fast and general cluster computing system for Big Data. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Spark Streaming for stream processing.

http://spark.apache.org/

Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

build/mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.)

You can build Spark using more than one thread by using the -T option with Maven, see "Parallel builds in Maven 3". More detailed documentation is available from the project site, at "Building Spark".

For general development tips, including info on developing Spark using an IDE, see "Useful Developer Tools".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1000:

scala> sc.parallelize(1 to 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1000:

>>> sc.parallelize(range(1000)).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

There is also a Kubernetes integration test, see resource-managers/kubernetes/integration-tests/README.md

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions.

Configuration

Please refer to the Configuration Guide in the online documentation for an overview on how to configure Spark.

Contributing

Please review the Contribution to Spark guide for information on how to get started contributing to the project.