spark-instrumented-optimizer/python
Davies Liu d39f2e9c68 [SPARK-4477] [PySpark] remove numpy from RDDSampler
In RDDSampler, it try use numpy to gain better performance for possion(), but the number of call of random() is only (1+faction) * N in the pure python implementation of possion(), so there is no much performance gain from numpy.

numpy is not a dependent of pyspark, so it maybe introduce some problem, such as there is no numpy installed in slaves, but only installed master, as reported in SPARK-927.

It also complicate the code a lot, so we may should remove numpy from RDDSampler.

I also did some benchmark to verify that:
```
>>> from pyspark.mllib.random import RandomRDDs
>>> rdd = RandomRDDs.uniformRDD(sc, 1 << 20, 1).cache()
>>> rdd.count()  # cache it
>>> rdd.sample(True, 0.9).count()    # measure this line
```
the results:

|withReplacement      |  random  | numpy.random |
 ------- | ------------ |  -------
|True | 1.5 s|  1.4 s|
|False|  0.6 s | 0.8 s|

closes #2313

Note: this patch including some commits that not mirrored to github, it will be OK after it catches up.

Author: Davies Liu <davies@databricks.com>
Author: Xiangrui Meng <meng@databricks.com>

Closes #3351 from davies/numpy and squashes the following commits:

5c438d7 [Davies Liu] fix comment
c5b9252 [Davies Liu] Merge pull request #1 from mengxr/SPARK-4477
98eb31b [Xiangrui Meng] make poisson sampling slightly faster
ee17d78 [Davies Liu] remove = for float
13f7b05 [Davies Liu] Merge branch 'master' of http://git-wip-us.apache.org/repos/asf/spark into numpy
f583023 [Davies Liu] fix tests
51649f5 [Davies Liu] remove numpy in RDDSampler
78bf997 [Davies Liu] fix tests, do not use numpy in randomSplit, no performance gain
f5fdf63 [Davies Liu] fix bug with int in weights
4dfa2cd [Davies Liu] refactor
f866bcf [Davies Liu] remove unneeded change
c7a2007 [Davies Liu] switch to python implementation
95a48ac [Davies Liu] Merge branch 'master' of github.com:apache/spark into randomSplit
0d9b256 [Davies Liu] refactor
1715ee3 [Davies Liu] address comments
41fce54 [Davies Liu] randomSplit()
2014-11-20 16:40:25 -08:00
..
docs [SPARK-4439] [MLlib] add python api for random forest 2014-11-20 15:31:28 -08:00
lib [SPARK-2305] [PySpark] Update Py4J to version 0.8.2.1 2014-07-29 19:02:06 -07:00
pyspark [SPARK-4477] [PySpark] remove numpy from RDDSampler 2014-11-20 16:40:25 -08:00
test_support [SPARK-3634] [PySpark] User's module should take precedence over system modules 2014-09-24 12:10:09 -07:00
.gitignore [SPARK-3946] gitignore in /python includes wrong directory 2014-10-14 14:09:39 -07:00
run-tests [SPARK-3721] [PySpark] broadcast objects larger than 2G 2014-11-18 16:17:51 -08:00