a3dc618486
There is only a single `stat.py` file for the `mllib.stat` package. We recently added `MultivariateGaussian` under `mllib.stat.distribution` in Scala/Java. It would be nice to refactor `stat.py` and make it easy to expand. Note that `ChiSqTestResult` is moved from `mllib.stat` to `mllib.stat.test`. The latter is used in Scala/Java. It is only used in the return value of `Statistics.chiSqTest`, so this should be an okay change. davies Author: Xiangrui Meng <meng@databricks.com> Closes #4266 from mengxr/py-stat-refactor and squashes the following commits: 1a5e1db [Xiangrui Meng] refactor stat.py
135 lines
3.8 KiB
Bash
Executable file
135 lines
3.8 KiB
Bash
Executable file
#!/usr/bin/env bash
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#
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# Licensed to the Apache Software Foundation (ASF) under one or more
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# contributor license agreements. See the NOTICE file distributed with
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# this work for additional information regarding copyright ownership.
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# The ASF licenses this file to You under the Apache License, Version 2.0
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# (the "License"); you may not use this file except in compliance with
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# the License. You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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#
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# Figure out where the Spark framework is installed
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FWDIR="$(cd "`dirname "$0"`"; cd ../; pwd)"
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# CD into the python directory to find things on the right path
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cd "$FWDIR/python"
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FAILED=0
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LOG_FILE=unit-tests.log
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rm -f $LOG_FILE
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# Remove the metastore and warehouse directory created by the HiveContext tests in Spark SQL
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rm -rf metastore warehouse
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function run_test() {
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echo "Running test: $1" | tee -a $LOG_FILE
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SPARK_TESTING=1 time "$FWDIR"/bin/pyspark $1 2>&1 | tee -a $LOG_FILE
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FAILED=$((PIPESTATUS[0]||$FAILED))
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# Fail and exit on the first test failure.
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if [[ $FAILED != 0 ]]; then
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cat $LOG_FILE | grep -v "^[0-9][0-9]*" # filter all lines starting with a number.
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echo -en "\033[31m" # Red
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echo "Had test failures; see logs."
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echo -en "\033[0m" # No color
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exit -1
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fi
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}
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function run_core_tests() {
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echo "Run core tests ..."
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run_test "pyspark/rdd.py"
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run_test "pyspark/context.py"
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run_test "pyspark/conf.py"
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PYSPARK_DOC_TEST=1 run_test "pyspark/broadcast.py"
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PYSPARK_DOC_TEST=1 run_test "pyspark/accumulators.py"
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run_test "pyspark/serializers.py"
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run_test "pyspark/profiler.py"
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run_test "pyspark/shuffle.py"
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run_test "pyspark/tests.py"
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}
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function run_sql_tests() {
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echo "Run sql tests ..."
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run_test "pyspark/sql.py"
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}
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function run_mllib_tests() {
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echo "Run mllib tests ..."
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run_test "pyspark/mllib/classification.py"
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run_test "pyspark/mllib/clustering.py"
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run_test "pyspark/mllib/feature.py"
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run_test "pyspark/mllib/linalg.py"
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run_test "pyspark/mllib/rand.py"
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run_test "pyspark/mllib/recommendation.py"
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run_test "pyspark/mllib/regression.py"
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run_test "pyspark/mllib/stat/_statistics.py"
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run_test "pyspark/mllib/tree.py"
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run_test "pyspark/mllib/util.py"
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run_test "pyspark/mllib/tests.py"
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}
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function run_ml_tests() {
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echo "Run ml tests ..."
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run_test "pyspark/ml/feature.py"
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run_test "pyspark/ml/classification.py"
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run_test "pyspark/ml/tests.py"
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}
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function run_streaming_tests() {
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echo "Run streaming tests ..."
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run_test "pyspark/streaming/util.py"
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run_test "pyspark/streaming/tests.py"
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}
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echo "Running PySpark tests. Output is in python/$LOG_FILE."
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export PYSPARK_PYTHON="python"
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# Try to test with Python 2.6, since that's the minimum version that we support:
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if [ $(which python2.6) ]; then
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export PYSPARK_PYTHON="python2.6"
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fi
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echo "Testing with Python version:"
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$PYSPARK_PYTHON --version
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run_core_tests
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run_sql_tests
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run_mllib_tests
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run_ml_tests
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run_streaming_tests
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# Try to test with PyPy
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if [ $(which pypy) ]; then
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export PYSPARK_PYTHON="pypy"
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echo "Testing with PyPy version:"
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$PYSPARK_PYTHON --version
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run_core_tests
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run_sql_tests
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run_streaming_tests
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fi
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if [[ $FAILED == 0 ]]; then
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echo -en "\033[32m" # Green
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echo "Tests passed."
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echo -en "\033[0m" # No color
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fi
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# TODO: in the long-run, it would be nice to use a test runner like `nose`.
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# The doctest fixtures are the current barrier to doing this.
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