spark-instrumented-optimizer/python/pyspark/rddsampler.py
Nicholas Chammas d614967b0b [SPARK-2627] [PySpark] have the build enforce PEP 8 automatically
As described in [SPARK-2627](https://issues.apache.org/jira/browse/SPARK-2627), we'd like Python code to automatically be checked for PEP 8 compliance by Jenkins. This pull request aims to do that.

Notes:
* We may need to install [`pep8`](https://pypi.python.org/pypi/pep8) on the build server.
* I'm expecting tests to fail now that PEP 8 compliance is being checked as part of the build. I'm fine with cleaning up any remaining PEP 8 violations as part of this pull request.
* I did not understand why the RAT and scalastyle reports are saved to text files. I did the same for the PEP 8 check, but only so that the console output style can match those for the RAT and scalastyle checks. The PEP 8 report is removed right after the check is complete.
* Updates to the ["Contributing to Spark"](https://cwiki.apache.org/confluence/display/SPARK/Contributing+to+Spark) guide will be submitted elsewhere, as I don't believe that text is part of the Spark repo.

Author: Nicholas Chammas <nicholas.chammas@gmail.com>
Author: nchammas <nicholas.chammas@gmail.com>

Closes #1744 from nchammas/master and squashes the following commits:

274b238 [Nicholas Chammas] [SPARK-2627] [PySpark] minor indentation changes
983d963 [nchammas] Merge pull request #5 from apache/master
1db5314 [nchammas] Merge pull request #4 from apache/master
0e0245f [Nicholas Chammas] [SPARK-2627] undo erroneous whitespace fixes
bf30942 [Nicholas Chammas] [SPARK-2627] PEP8: comment spacing
6db9a44 [nchammas] Merge pull request #3 from apache/master
7b4750e [Nicholas Chammas] merge upstream changes
91b7584 [Nicholas Chammas] [SPARK-2627] undo unnecessary line breaks
44e3e56 [Nicholas Chammas] [SPARK-2627] use tox.ini to exclude files
b09fae2 [Nicholas Chammas] don't wrap comments unnecessarily
bfb9f9f [Nicholas Chammas] [SPARK-2627] keep up with the PEP 8 fixes
9da347f [nchammas] Merge pull request #2 from apache/master
aa5b4b5 [Nicholas Chammas] [SPARK-2627] follow Spark bash style for if blocks
d0a83b9 [Nicholas Chammas] [SPARK-2627] check that pep8 downloaded fine
dffb5dd [Nicholas Chammas] [SPARK-2627] download pep8 at runtime
a1ce7ae [Nicholas Chammas] [SPARK-2627] space out test report sections
21da538 [Nicholas Chammas] [SPARK-2627] it's PEP 8, not PEP8
6f4900b [Nicholas Chammas] [SPARK-2627] more misc PEP 8 fixes
fe57ed0 [Nicholas Chammas] removing merge conflict backups
9c01d4c [nchammas] Merge pull request #1 from apache/master
9a66cb0 [Nicholas Chammas] resolving merge conflicts
a31ccc4 [Nicholas Chammas] [SPARK-2627] miscellaneous PEP 8 fixes
beaa9ac [Nicholas Chammas] [SPARK-2627] fail check on non-zero status
723ed39 [Nicholas Chammas] always delete the report file
0541ebb [Nicholas Chammas] [SPARK-2627] call Python linter from run-tests
12440fa [Nicholas Chammas] [SPARK-2627] add Scala linter
61c07b9 [Nicholas Chammas] [SPARK-2627] add Python linter
75ad552 [Nicholas Chammas] make check output style consistent
2014-08-06 12:58:24 -07:00

138 lines
4.8 KiB
Python

#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
import sys
import random
class RDDSamplerBase(object):
def __init__(self, withReplacement, seed=None):
try:
import numpy
self._use_numpy = True
except ImportError:
print >> sys.stderr, (
"NumPy does not appear to be installed. "
"Falling back to default random generator for sampling.")
self._use_numpy = False
self._seed = seed if seed is not None else random.randint(0, sys.maxint)
self._withReplacement = withReplacement
self._random = None
self._split = None
self._rand_initialized = False
def initRandomGenerator(self, split):
if self._use_numpy:
import numpy
self._random = numpy.random.RandomState(self._seed)
else:
self._random = random.Random(self._seed)
for _ in range(0, split):
# discard the next few values in the sequence to have a
# different seed for the different splits
self._random.randint(0, sys.maxint)
self._split = split
self._rand_initialized = True
def getUniformSample(self, split):
if not self._rand_initialized or split != self._split:
self.initRandomGenerator(split)
if self._use_numpy:
return self._random.random_sample()
else:
return self._random.uniform(0.0, 1.0)
def getPoissonSample(self, split, mean):
if not self._rand_initialized or split != self._split:
self.initRandomGenerator(split)
if self._use_numpy:
return self._random.poisson(mean)
else:
# here we simulate drawing numbers n_i ~ Poisson(lambda = 1/mean) by
# drawing a sequence of numbers delta_j ~ Exp(mean)
num_arrivals = 1
cur_time = 0.0
cur_time += self._random.expovariate(mean)
if cur_time > 1.0:
return 0
while(cur_time <= 1.0):
cur_time += self._random.expovariate(mean)
num_arrivals += 1
return (num_arrivals - 1)
def shuffle(self, vals):
if self._random is None:
self.initRandomGenerator(0) # this should only ever called on the master so
# the split does not matter
if self._use_numpy:
self._random.shuffle(vals)
else:
self._random.shuffle(vals, self._random.random)
class RDDSampler(RDDSamplerBase):
def __init__(self, withReplacement, fraction, seed=None):
RDDSamplerBase.__init__(self, withReplacement, seed)
self._fraction = fraction
def func(self, split, iterator):
if self._withReplacement:
for obj in iterator:
# For large datasets, the expected number of occurrences of each element in
# a sample with replacement is Poisson(frac). We use that to get a count for
# each element.
count = self.getPoissonSample(split, mean=self._fraction)
for _ in range(0, count):
yield obj
else:
for obj in iterator:
if self.getUniformSample(split) <= self._fraction:
yield obj
class RDDStratifiedSampler(RDDSamplerBase):
def __init__(self, withReplacement, fractions, seed=None):
RDDSamplerBase.__init__(self, withReplacement, seed)
self._fractions = fractions
def func(self, split, iterator):
if self._withReplacement:
for key, val in iterator:
# For large datasets, the expected number of occurrences of each element in
# a sample with replacement is Poisson(frac). We use that to get a count for
# each element.
count = self.getPoissonSample(split, mean=self._fractions[key])
for _ in range(0, count):
yield key, val
else:
for key, val in iterator:
if self.getUniformSample(split) <= self._fractions[key]:
yield key, val