Apache Spark - A unified analytics engine for large-scale data processing
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DB Tsai c1080b6fdd [SPARK-7568] [ML] ml.LogisticRegression doesn't output the right prediction
The difference is because we previously don't fit the intercept in Spark 1.3. Here, we change the input `String` so that the probability of instance 6 can be classified as `1.0` without any ambiguity.

with lambda = 0.001 in current LOR implementation, the prediction is
```
(4, spark i j k) --> prob=[0.1596407738787411,0.8403592261212589], prediction=1.0
(5, l m n) --> prob=[0.8378325685476612,0.16216743145233883], prediction=0.0
(6, spark hadoop spark) --> prob=[0.0692663313297627,0.9307336686702373], prediction=1.0
(7, apache hadoop) --> prob=[0.9821575333444208,0.01784246665557917], prediction=0.0
```
and the training accuracy is
```
(0, a b c d e spark) --> prob=[0.0021342419881406746,0.9978657580118594], prediction=1.0
(1, b d) --> prob=[0.9959176174854043,0.004082382514595685], prediction=0.0
(2, spark f g h) --> prob=[0.0014541569986711233,0.9985458430013289], prediction=1.0
(3, hadoop mapreduce) --> prob=[0.9982978367343561,0.0017021632656438518], prediction=0.0
```

Author: DB Tsai <dbt@netflix.com>

Closes #6109 from dbtsai/lor-example and squashes the following commits:

ac63ce4 [DB Tsai] first commit
2015-05-14 01:26:08 -07:00
assembly [SPARK-6869] [PYSPARK] Add pyspark archives path to PYTHONPATH 2015-05-08 08:44:46 -05:00
bagel [SPARK-6758]block the right jetty package in log 2015-04-09 17:44:08 -04:00
bin Limit help option regex 2015-05-01 19:26:55 +01:00
build SPARK-5856: In Maven build script, launch Zinc with more memory 2015-02-17 10:10:01 -08:00
conf [SPARK-2691] [MESOS] Support for Mesos DockerInfo 2015-05-01 18:41:22 -07:00
core [HOT FIX #6125] Do not wait for all stages to start rendering 2015-05-13 21:04:13 -07:00
data/mllib [SPARK-5939][MLLib] make FPGrowth example app take parameters 2015-02-23 08:47:28 -08:00
dev [HOTFIX] Bug in merge script 2015-05-13 17:55:06 -07:00
docker [SPARK-2691] [MESOS] Support for Mesos DockerInfo 2015-05-01 18:41:22 -07:00
docs [SPARK-7557] [ML] [DOC] User guide for spark.ml HashingTF, Tokenizer 2015-05-12 16:39:56 -07:00
ec2 updated ec2 instance types 2015-05-08 15:59:34 -07:00
examples [SPARK-7568] [ML] ml.LogisticRegression doesn't output the right prediction 2015-05-14 01:26:08 -07:00
external [SPARK-7356] [STREAMING] Fix flakey tests in FlumePollingStreamSuite using SparkSink's batch CountDownLatch. 2015-05-13 16:43:30 -07:00
extras [SPARK-6440][CORE]Handle IPv6 addresses properly when constructing URI 2015-04-13 12:55:25 +01:00
graphx [SPARK-5854] personalized page rank 2015-05-01 11:55:43 -07:00
launcher [MINOR] Avoid passing the PermGenSize option to IBM JVMs. 2015-05-13 21:00:12 +01:00
mllib [SPARK-7407] [MLLIB] use uid + name to identify parameters 2015-05-14 01:22:15 -07:00
network [SPARK-6955] Perform port retries at NettyBlockTransferService level 2015-05-08 17:13:55 -07:00
project [SPARK-7081] Faster sort-based shuffle path using binary processing cache-aware sort 2015-05-13 17:07:31 -07:00
python [SPARK-7382] [MLLIB] Feature Parity in PySpark for ml.classification 2015-05-13 15:13:09 -07:00
R [SPARK-7482] [SPARKR] Rename some DataFrame API methods in SparkR to match their counterparts in Scala. 2015-05-12 23:52:30 -07:00
repl [SPARK-6568] spark-shell.cmd --jars option does not accept the jar that has space in its path 2015-05-13 09:43:40 +01:00
sbin [SPARK-5338] [MESOS] Add cluster mode support for Mesos 2015-04-28 13:33:57 -07:00
sbt Adde LICENSE Header to build/mvn, build/sbt and sbt/sbt 2014-12-29 10:48:53 -08:00
sql [SPARK-7595] [SQL] Window will cause resolve failed with self join 2015-05-14 00:23:27 -07:00
streaming [SPARK-6752] [STREAMING] [REVISED] Allow StreamingContext to be recreated from checkpoint and existing SparkContext 2015-05-13 17:33:15 -07:00
tools [SPARK-4550] In sort-based shuffle, store map outputs in serialized form 2015-04-30 23:14:14 -07:00
unsafe [SPARK-7081] Faster sort-based shuffle path using binary processing cache-aware sort 2015-05-13 17:07:31 -07:00
yarn [SPARK-6470] [YARN] Add support for YARN node labels. 2015-05-11 12:09:39 -07:00
.gitattributes [SPARK-3870] EOL character enforcement 2014-10-31 12:39:52 -07:00
.gitignore [MINOR] Ignore python/lib/pyspark.zip 2015-05-08 14:06:02 -07:00
.rat-excludes [WEBUI] Remove debug feature for vis.js 2015-05-08 14:06:37 -07:00
CONTRIBUTING.md [SPARK-6889] [DOCS] CONTRIBUTING.md updates to accompany contribution doc updates 2015-04-21 22:34:31 -07:00
LICENSE [SPARK-7403] [WEBUI] Link URL in objects on Timeline View is wrong in case of running on YARN 2015-05-09 10:10:29 +01:00
make-distribution.sh [SPARK-7302] [DOCS] SPARK building documentation still mentions building for yarn 0.23 2015-05-03 21:22:31 +01:00
NOTICE SPARK-1827. LICENSE and NOTICE files need a refresh to contain transitive dependency info 2014-05-14 09:38:33 -07:00
pom.xml [SPARK-7081] Faster sort-based shuffle path using binary processing cache-aware sort 2015-05-13 17:07:31 -07:00
README.md [MINOR] [DOCS] Fix the link to test building info on the wiki 2015-05-12 00:25:43 +01:00
scalastyle-config.xml [SPARK-6428] Turn on explicit type checking for public methods. 2015-04-03 01:25:02 -07:00
tox.ini [SPARK-7427] [PYSPARK] Make sharedParams match in Scala, Python 2015-05-10 19:18:32 -07:00

Apache Spark

Spark is a fast and general cluster computing system for Big Data. It provides high-level APIs in Scala, Java, and Python, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and structured data processing, MLlib for machine learning, GraphX for graph processing, and Spark Streaming for stream processing.

http://spark.apache.org/

Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page and project wiki. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.) More detailed documentation is available from the project site, at "Building Spark".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1000:

scala> sc.parallelize(1 to 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1000:

>>> sc.parallelize(range(1000)).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn-cluster" or "yarn-client" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions. See also "Third Party Hadoop Distributions" for guidance on building a Spark application that works with a particular distribution.

Configuration

Please refer to the Configuration guide in the online documentation for an overview on how to configure Spark.