Apache Spark - A unified analytics engine for large-scale data processing
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HyukjinKwon ee8d661058 [SPARK-30434][PYTHON][SQL] Move pandas related functionalities into 'pandas' sub-package
### What changes were proposed in this pull request?

This PR proposes to move pandas related functionalities into pandas package. Namely:

```bash
pyspark/sql/pandas
├── __init__.py
├── conversion.py  # Conversion between pandas <> PySpark DataFrames
├── functions.py   # pandas_udf
├── group_ops.py   # Grouped UDF / Cogrouped UDF + groupby.apply, groupby.cogroup.apply
├── map_ops.py     # Map Iter UDF + mapInPandas
├── serializers.py # pandas <> PyArrow serializers
├── types.py       # Type utils between pandas <> PyArrow
└── utils.py       # Version requirement checks
```

In order to separately locate `groupby.apply`, `groupby.cogroup.apply`, `mapInPandas`, `toPandas`, and `createDataFrame(pdf)` under `pandas` sub-package, I had to use a mix-in approach which Scala side uses often by `trait`, and also pandas itself uses this approach (see `IndexOpsMixin` as an example) to group related functionalities. Currently, you can think it's like Scala's self typed trait. See the structure below:

```python
class PandasMapOpsMixin(object):
    def mapInPandas(self, ...):
        ...
        return ...

    # other Pandas <> PySpark APIs
```

```python
class DataFrame(PandasMapOpsMixin):

    # other DataFrame APIs equivalent to Scala side.

```

Yes, This is a big PR but they are mostly just moving around except one case `createDataFrame` which I had to split the methods.

### Why are the changes needed?

There are pandas functionalities here and there and I myself gets lost where it was. Also, when you have to make a change commonly for all of pandas related features, it's almost impossible now.

Also, after this change, `DataFrame` and `SparkSession` become more consistent with Scala side since pandas is specific to Python, and this change separates pandas-specific APIs away from `DataFrame` or `SparkSession`.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Existing tests should cover. Also, I manually built the PySpark API documentation and checked.

Closes #27109 from HyukjinKwon/pandas-refactoring.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-01-09 10:22:50 +09:00
.github [SPARK-30173] Tweak stale PR message 2020-01-07 08:34:59 -06:00
assembly Revert [SPARK-27300][GRAPH] Add Spark Graph modules and dependencies 2019-12-17 09:06:23 -08:00
bin [SPARK-28525][DEPLOY] Allow Launcher to be applied Java options 2019-07-30 12:45:32 -07:00
build [SPARK-30121][BUILD] Fix memory usage in sbt build script 2019-12-05 11:50:55 -06:00
common [SPARK-30406] OneForOneStreamManager ensure that compound operations on shared variables are atomic 2020-01-03 11:41:45 -06:00
conf [SPARK-29032][CORE] Add PrometheusServlet to monitor Master/Worker/Driver 2019-09-13 21:31:21 +00:00
core [SPARK-30440][CORE][TESTS] Avoid race condition in TaskSetManagerSuite by not using resourceOffer 2020-01-08 16:28:19 -08:00
data [SPARK-22666][ML][SQL] Spark datasource for image format 2018-09-05 11:59:00 -07:00
dev [SPARK-30434][PYTHON][SQL] Move pandas related functionalities into 'pandas' sub-package 2020-01-09 10:22:50 +09:00
docs [SPARK-30417][CORE] Task speculation numTaskThreshold should be greater than 0 even EXECUTOR_CORES is not set under Standalone mode 2020-01-08 11:30:32 -08:00
examples [SPARK-30434][PYTHON][SQL] Move pandas related functionalities into 'pandas' sub-package 2020-01-09 10:22:50 +09:00
external [SPARK-30267][SQL][FOLLOWUP] Use while loop in Avro Array Deserializer 2020-01-07 22:39:25 -08:00
graphx [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
hadoop-cloud [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
launcher [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
licenses [SPARK-27557][DOC] Add copy button to Python API docs for easier copying of code-blocks 2019-05-01 11:26:18 -05:00
licenses-binary [SPARK-29308][BUILD] Update deps in dev/deps/spark-deps-hadoop-3.2 for hadoop-3.2 2019-10-13 12:53:12 -05:00
mllib [MINOR][ML][INT] Array.fill(0) -> Array.ofDim; Array.empty -> Array.emptyIntArray 2020-01-09 00:07:42 +09:00
mllib-local [SPARK-30329][ML] add iterator/foreach methods for Vectors 2019-12-31 15:52:17 +08:00
project [SPARK-30144][ML][PYSPARK] Make MultilayerPerceptronClassificationModel extend MultilayerPerceptronParams 2020-01-03 12:01:11 -06:00
python [SPARK-30434][PYTHON][SQL] Move pandas related functionalities into 'pandas' sub-package 2020-01-09 10:22:50 +09:00
R [SPARK-30335][SQL][DOCS] Add a note first, last, collect_list and collect_set can be non-deterministic in SQL function docs as well 2020-01-07 14:31:59 +09:00
repl [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
resource-managers [SPARK-30359][CORE] Don't clear executorsPendingToRemove at the beginning of CoarseGrainedSchedulerBackend.reset 2020-01-03 22:54:05 +08:00
sbin [SPARK-28164] Fix usage description of start-slave.sh 2019-06-26 12:42:33 -05:00
sql [SPARK-30434][PYTHON][SQL] Move pandas related functionalities into 'pandas' sub-package 2020-01-09 10:22:50 +09:00
streaming [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
tools [INFRA] Reverts commit 56dcd79 and c216ef1 2019-12-16 19:57:44 -07:00
.gitattributes [SPARK-3870] EOL character enforcement 2014-10-31 12:39:52 -07:00
.gitignore [SPARK-30084][DOCS] Document how to trigger Jekyll build on Python API doc changes 2019-12-04 17:31:23 -06:00
appveyor.yml [SPARK-29991][INFRA] Support Hive 1.2 and Hive 2.3 (default) in PR builder 2019-11-30 12:48:15 +09:00
CONTRIBUTING.md [MINOR][DOCS] Tighten up some key links to the project and download pages to use HTTPS 2019-05-21 10:56:42 -07:00
LICENSE [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
LICENSE-binary Revert [SPARK-27300][GRAPH] Add Spark Graph modules and dependencies 2019-12-17 09:06:23 -08:00
NOTICE [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
NOTICE-binary [SPARK-29674][CORE] Update dropwizard metrics to 4.1.x for JDK 9+ 2019-11-03 15:13:06 -08:00
pom.xml [SPARK-28144][SPARK-29294][SS] Upgrade Kafka to 2.4.0 2019-12-21 14:01:25 -08:00
README.md [SPARK-28473][DOC] Stylistic consistency of build command in README 2019-07-23 16:29:46 -07:00
scalastyle-config.xml [SPARK-30030][INFRA] Use RegexChecker instead of TokenChecker to check org.apache.commons.lang. 2019-11-25 12:03:15 -08:00

Apache Spark

Spark is a unified analytics engine for large-scale data processing. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing.

https://spark.apache.org/

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Online Documentation

You can find the latest Spark documentation, including a programming guide, on the project web page. This README file only contains basic setup instructions.

Building Spark

Spark is built using Apache Maven. To build Spark and its example programs, run:

./build/mvn -DskipTests clean package

(You do not need to do this if you downloaded a pre-built package.)

You can build Spark using more than one thread by using the -T option with Maven, see "Parallel builds in Maven 3". More detailed documentation is available from the project site, at "Building Spark".

For general development tips, including info on developing Spark using an IDE, see "Useful Developer Tools".

Interactive Scala Shell

The easiest way to start using Spark is through the Scala shell:

./bin/spark-shell

Try the following command, which should return 1,000,000,000:

scala> spark.range(1000 * 1000 * 1000).count()

Interactive Python Shell

Alternatively, if you prefer Python, you can use the Python shell:

./bin/pyspark

And run the following command, which should also return 1,000,000,000:

>>> spark.range(1000 * 1000 * 1000).count()

Example Programs

Spark also comes with several sample programs in the examples directory. To run one of them, use ./bin/run-example <class> [params]. For example:

./bin/run-example SparkPi

will run the Pi example locally.

You can set the MASTER environment variable when running examples to submit examples to a cluster. This can be a mesos:// or spark:// URL, "yarn" to run on YARN, and "local" to run locally with one thread, or "local[N]" to run locally with N threads. You can also use an abbreviated class name if the class is in the examples package. For instance:

MASTER=spark://host:7077 ./bin/run-example SparkPi

Many of the example programs print usage help if no params are given.

Running Tests

Testing first requires building Spark. Once Spark is built, tests can be run using:

./dev/run-tests

Please see the guidance on how to run tests for a module, or individual tests.

There is also a Kubernetes integration test, see resource-managers/kubernetes/integration-tests/README.md

A Note About Hadoop Versions

Spark uses the Hadoop core library to talk to HDFS and other Hadoop-supported storage systems. Because the protocols have changed in different versions of Hadoop, you must build Spark against the same version that your cluster runs.

Please refer to the build documentation at "Specifying the Hadoop Version and Enabling YARN" for detailed guidance on building for a particular distribution of Hadoop, including building for particular Hive and Hive Thriftserver distributions.

Configuration

Please refer to the Configuration Guide in the online documentation for an overview on how to configure Spark.

Contributing

Please review the Contribution to Spark guide for information on how to get started contributing to the project.