spark-instrumented-optimizer/python/pyspark/sql/group.py
HyukjinKwon ee8d661058 [SPARK-30434][PYTHON][SQL] Move pandas related functionalities into 'pandas' sub-package
### What changes were proposed in this pull request?

This PR proposes to move pandas related functionalities into pandas package. Namely:

```bash
pyspark/sql/pandas
├── __init__.py
├── conversion.py  # Conversion between pandas <> PySpark DataFrames
├── functions.py   # pandas_udf
├── group_ops.py   # Grouped UDF / Cogrouped UDF + groupby.apply, groupby.cogroup.apply
├── map_ops.py     # Map Iter UDF + mapInPandas
├── serializers.py # pandas <> PyArrow serializers
├── types.py       # Type utils between pandas <> PyArrow
└── utils.py       # Version requirement checks
```

In order to separately locate `groupby.apply`, `groupby.cogroup.apply`, `mapInPandas`, `toPandas`, and `createDataFrame(pdf)` under `pandas` sub-package, I had to use a mix-in approach which Scala side uses often by `trait`, and also pandas itself uses this approach (see `IndexOpsMixin` as an example) to group related functionalities. Currently, you can think it's like Scala's self typed trait. See the structure below:

```python
class PandasMapOpsMixin(object):
    def mapInPandas(self, ...):
        ...
        return ...

    # other Pandas <> PySpark APIs
```

```python
class DataFrame(PandasMapOpsMixin):

    # other DataFrame APIs equivalent to Scala side.

```

Yes, This is a big PR but they are mostly just moving around except one case `createDataFrame` which I had to split the methods.

### Why are the changes needed?

There are pandas functionalities here and there and I myself gets lost where it was. Also, when you have to make a change commonly for all of pandas related features, it's almost impossible now.

Also, after this change, `DataFrame` and `SparkSession` become more consistent with Scala side since pandas is specific to Python, and this change separates pandas-specific APIs away from `DataFrame` or `SparkSession`.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Existing tests should cover. Also, I manually built the PySpark API documentation and checked.

Closes #27109 from HyukjinKwon/pandas-refactoring.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-01-09 10:22:50 +09:00

262 lines
9.9 KiB
Python

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import sys
from pyspark import since
from pyspark.rdd import ignore_unicode_prefix
from pyspark.sql.column import Column, _to_seq
from pyspark.sql.dataframe import DataFrame
from pyspark.sql.pandas.group_ops import PandasGroupedOpsMixin
from pyspark.sql.types import *
__all__ = ["GroupedData"]
def dfapi(f):
def _api(self):
name = f.__name__
jdf = getattr(self._jgd, name)()
return DataFrame(jdf, self.sql_ctx)
_api.__name__ = f.__name__
_api.__doc__ = f.__doc__
return _api
def df_varargs_api(f):
def _api(self, *cols):
name = f.__name__
jdf = getattr(self._jgd, name)(_to_seq(self.sql_ctx._sc, cols))
return DataFrame(jdf, self.sql_ctx)
_api.__name__ = f.__name__
_api.__doc__ = f.__doc__
return _api
class GroupedData(PandasGroupedOpsMixin):
"""
A set of methods for aggregations on a :class:`DataFrame`,
created by :func:`DataFrame.groupBy`.
.. versionadded:: 1.3
"""
def __init__(self, jgd, df):
self._jgd = jgd
self._df = df
self.sql_ctx = df.sql_ctx
@ignore_unicode_prefix
@since(1.3)
def agg(self, *exprs):
"""Compute aggregates and returns the result as a :class:`DataFrame`.
The available aggregate functions can be:
1. built-in aggregation functions, such as `avg`, `max`, `min`, `sum`, `count`
2. group aggregate pandas UDFs, created with :func:`pyspark.sql.functions.pandas_udf`
.. note:: There is no partial aggregation with group aggregate UDFs, i.e.,
a full shuffle is required. Also, all the data of a group will be loaded into
memory, so the user should be aware of the potential OOM risk if data is skewed
and certain groups are too large to fit in memory.
.. seealso:: :func:`pyspark.sql.functions.pandas_udf`
If ``exprs`` is a single :class:`dict` mapping from string to string, then the key
is the column to perform aggregation on, and the value is the aggregate function.
Alternatively, ``exprs`` can also be a list of aggregate :class:`Column` expressions.
.. note:: Built-in aggregation functions and group aggregate pandas UDFs cannot be mixed
in a single call to this function.
:param exprs: a dict mapping from column name (string) to aggregate functions (string),
or a list of :class:`Column`.
>>> gdf = df.groupBy(df.name)
>>> sorted(gdf.agg({"*": "count"}).collect())
[Row(name=u'Alice', count(1)=1), Row(name=u'Bob', count(1)=1)]
>>> from pyspark.sql import functions as F
>>> sorted(gdf.agg(F.min(df.age)).collect())
[Row(name=u'Alice', min(age)=2), Row(name=u'Bob', min(age)=5)]
>>> from pyspark.sql.functions import pandas_udf, PandasUDFType
>>> @pandas_udf('int', PandasUDFType.GROUPED_AGG) # doctest: +SKIP
... def min_udf(v):
... return v.min()
>>> sorted(gdf.agg(min_udf(df.age)).collect()) # doctest: +SKIP
[Row(name=u'Alice', min_udf(age)=2), Row(name=u'Bob', min_udf(age)=5)]
"""
assert exprs, "exprs should not be empty"
if len(exprs) == 1 and isinstance(exprs[0], dict):
jdf = self._jgd.agg(exprs[0])
else:
# Columns
assert all(isinstance(c, Column) for c in exprs), "all exprs should be Column"
jdf = self._jgd.agg(exprs[0]._jc,
_to_seq(self.sql_ctx._sc, [c._jc for c in exprs[1:]]))
return DataFrame(jdf, self.sql_ctx)
@dfapi
@since(1.3)
def count(self):
"""Counts the number of records for each group.
>>> sorted(df.groupBy(df.age).count().collect())
[Row(age=2, count=1), Row(age=5, count=1)]
"""
@df_varargs_api
@since(1.3)
def mean(self, *cols):
"""Computes average values for each numeric columns for each group.
:func:`mean` is an alias for :func:`avg`.
:param cols: list of column names (string). Non-numeric columns are ignored.
>>> df.groupBy().mean('age').collect()
[Row(avg(age)=3.5)]
>>> df3.groupBy().mean('age', 'height').collect()
[Row(avg(age)=3.5, avg(height)=82.5)]
"""
@df_varargs_api
@since(1.3)
def avg(self, *cols):
"""Computes average values for each numeric columns for each group.
:func:`mean` is an alias for :func:`avg`.
:param cols: list of column names (string). Non-numeric columns are ignored.
>>> df.groupBy().avg('age').collect()
[Row(avg(age)=3.5)]
>>> df3.groupBy().avg('age', 'height').collect()
[Row(avg(age)=3.5, avg(height)=82.5)]
"""
@df_varargs_api
@since(1.3)
def max(self, *cols):
"""Computes the max value for each numeric columns for each group.
>>> df.groupBy().max('age').collect()
[Row(max(age)=5)]
>>> df3.groupBy().max('age', 'height').collect()
[Row(max(age)=5, max(height)=85)]
"""
@df_varargs_api
@since(1.3)
def min(self, *cols):
"""Computes the min value for each numeric column for each group.
:param cols: list of column names (string). Non-numeric columns are ignored.
>>> df.groupBy().min('age').collect()
[Row(min(age)=2)]
>>> df3.groupBy().min('age', 'height').collect()
[Row(min(age)=2, min(height)=80)]
"""
@df_varargs_api
@since(1.3)
def sum(self, *cols):
"""Compute the sum for each numeric columns for each group.
:param cols: list of column names (string). Non-numeric columns are ignored.
>>> df.groupBy().sum('age').collect()
[Row(sum(age)=7)]
>>> df3.groupBy().sum('age', 'height').collect()
[Row(sum(age)=7, sum(height)=165)]
"""
@since(1.6)
def pivot(self, pivot_col, values=None):
"""
Pivots a column of the current :class:`DataFrame` and perform the specified aggregation.
There are two versions of pivot function: one that requires the caller to specify the list
of distinct values to pivot on, and one that does not. The latter is more concise but less
efficient, because Spark needs to first compute the list of distinct values internally.
:param pivot_col: Name of the column to pivot.
:param values: List of values that will be translated to columns in the output DataFrame.
# Compute the sum of earnings for each year by course with each course as a separate column
>>> df4.groupBy("year").pivot("course", ["dotNET", "Java"]).sum("earnings").collect()
[Row(year=2012, dotNET=15000, Java=20000), Row(year=2013, dotNET=48000, Java=30000)]
# Or without specifying column values (less efficient)
>>> df4.groupBy("year").pivot("course").sum("earnings").collect()
[Row(year=2012, Java=20000, dotNET=15000), Row(year=2013, Java=30000, dotNET=48000)]
>>> df5.groupBy("sales.year").pivot("sales.course").sum("sales.earnings").collect()
[Row(year=2012, Java=20000, dotNET=15000), Row(year=2013, Java=30000, dotNET=48000)]
"""
if values is None:
jgd = self._jgd.pivot(pivot_col)
else:
jgd = self._jgd.pivot(pivot_col, values)
return GroupedData(jgd, self._df)
def _test():
import doctest
from pyspark.sql import Row, SparkSession
import pyspark.sql.group
globs = pyspark.sql.group.__dict__.copy()
spark = SparkSession.builder\
.master("local[4]")\
.appName("sql.group tests")\
.getOrCreate()
sc = spark.sparkContext
globs['sc'] = sc
globs['spark'] = spark
globs['df'] = sc.parallelize([(2, 'Alice'), (5, 'Bob')]) \
.toDF(StructType([StructField('age', IntegerType()),
StructField('name', StringType())]))
globs['df3'] = sc.parallelize([Row(name='Alice', age=2, height=80),
Row(name='Bob', age=5, height=85)]).toDF()
globs['df4'] = sc.parallelize([Row(course="dotNET", year=2012, earnings=10000),
Row(course="Java", year=2012, earnings=20000),
Row(course="dotNET", year=2012, earnings=5000),
Row(course="dotNET", year=2013, earnings=48000),
Row(course="Java", year=2013, earnings=30000)]).toDF()
globs['df5'] = sc.parallelize([
Row(training="expert", sales=Row(course="dotNET", year=2012, earnings=10000)),
Row(training="junior", sales=Row(course="Java", year=2012, earnings=20000)),
Row(training="expert", sales=Row(course="dotNET", year=2012, earnings=5000)),
Row(training="junior", sales=Row(course="dotNET", year=2013, earnings=48000)),
Row(training="expert", sales=Row(course="Java", year=2013, earnings=30000))]).toDF()
(failure_count, test_count) = doctest.testmod(
pyspark.sql.group, globs=globs,
optionflags=doctest.ELLIPSIS | doctest.NORMALIZE_WHITESPACE | doctest.REPORT_NDIFF)
spark.stop()
if failure_count:
sys.exit(-1)
if __name__ == "__main__":
_test()