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@string{sigmod1 = "Proceedings of ACM SIGMOD"}
@string{sigmod = "SIGMOD"}
@string{scishort = "SCI Institute--Univ. of Utah"}
@string{vis = "Proceedings of IEEE Visualization"}
@string{www = "Proceedings of the International Conference on World Wide Web (WWW)"}
@string{icde = "IEEE International Conference on Data Engineering (ICDE)"}
@string{sbbd = "Proceedings of the Brazilian Symposium on Databases (SBBD)"}
@article{freire@deb2014,
author = {Juliana Freire and
Cl{\'{a}}udio T. Silva and
Huy T. Vo and
Harish Doraiswamy and
Nivan Ferreira and
Jorge Poco},
title = {{*}{Riding from Urban Data to Insight Using New York City Taxis}},
journal = {{IEEE} Data Eng. Bull.},
volume = {37},
number = {4},
pages = {43--55},
year = {2014},
OPTurl = {http://sites.computer.org/debull/A14dec/p43.pdf},
OPTtimestamp = {Fri, 24 Jul 2015 14:48:13 +0200},
OPTbiburl = {http://dblp.uni-trier.de/rec/bib/journals/debu/FreireSVDFP14},
OPTbibsource = {dblp computer science bibliography, http://dblp.org}
}
@inproceedings{urbanprofiler@www2105,
author = {Castellani Ribeiro, Daniel and Vo, Huy T. and Freire, Juliana and Silva, Cl\'{a}udio T.},
title = {{*}{An Urban Data Profiler}},
booktitle = {Proceedings of the 24th International Conference on World Wide Web},
series = {WWW '15 Companion},
year = {2015},
OPTisbn = {978-1-4503-3473-0},
OPTlocation = {Florence, Italy},
pages = {1389--1394},
numpages = {6},
OPTurl = {http://doi.acm.org/10.1145/2740908.2742135},
OPTdoi = {10.1145/2740908.2742135},
OPTacmid = {2742135},
publisher = {ACM},
OPTaddress = {New York, NY, USA},
OPTkeywords = {automatic type detection, dataset analysis, metadata extraction, urban data},
}
@inproceedings{ota@ieeebigdata2015,
author = {Masayo Ota and
Huy T. Vo and
Cl{\'{a}}udio T. Silva and
Juliana Freire},
title = {{*}{A} scalable approach for data-driven taxi ride-sharing simulation},
booktitle = {{IEEE} International Conference on Big Data},
pages = {888--897},
year = {2015},
OPTcrossref = {DBLP:conf/bigdataconf/2015},
OPTurl = {http://dx.doi.org/10.1109/BigData.2015.7363837},
OPTdoi = {10.1109/BigData.2015.7363837},
OPTtimestamp = {Fri, 08 Jan 2016 13:52:01 +0100},
biburl = {http://dblp.uni-trier.de/rec/bib/conf/bigdataconf/OtaVSF15},
bibsource = {dblp computer science bibliography, http://dblp.org}
}
@article{palomo@tvcg2016,
author = {Cesar Palomo and
Zhan Guo and
Cl{\'{a}}udio T. Silva and
Juliana Freire},
title = {{*}{Visually Exploring Transportation Schedules}},
journal = {{IEEE} Trans. Vis. Comput. Graph.},
volume = {22},
number = {1},
pages = {170--179},
year = {2016},
OPTurl = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2015.2467592},
OPTdoi = {10.1109/TVCG.2015.2467592},
OPTtimestamp = {Wed, 04 Nov 2015 13:15:40 +0100},
biburl = {http://dblp.uni-trier.de/rec/bib/journals/tvcg/PalomoGSF16},
bibsource = {dblp computer science bibliography, http://dblp.org}
}
@article{poco@cgf2015,
title={{*}{Exploring Traffic Dynamics in Urban Environments Using Vector-Valued Functions}},
author={Poco, Jorge and Doraiswamy, Harish and Vo, Huy and Comba, Jo{\~a}o LD and Freire, Juliana and Silva, Cl{\'a}udio and others},
journal={Computer Graphics Forum},
volume={34},
number={3},
pages={161--170},
year={2015},
OPTorganization={Wiley Online Library}
}
@inproceedings{bessa@visds2015,
author = {Aline Bessa and
Fernando de Mesentier Silva and
Rodrigo Frassetto Nogueira and
Enrico Bertini and
Juliana Freire},
title = {{*}{RioBusData: Outlier Detection in Bus Routes of Rio de Janeiro}},
booktitle = {IEEE Symposium on Visualization in Data Science},
OPTvolume = {abs/1601.06128},
year = {2015},
OPTurl = {http://arxiv.org/abs/1601.06128},
timestamp = {Mon, 01 Feb 2016 15:36:05 +0100},
biburl = {http://dblp.uni-trier.de/rec/bib/journals/corr/BessaSNBF16},
bibsource = {dblp computer science bibliography, http://dblp.org}
}
@inproceedings{doraiswamy@icde2016,
author = {Doraiswamy, H. and Vo, H. and Silva, C.T. and Freire, J.},
title = {{*}{A GPU-Based Index to Support Interactive
Spatio-Temporal Queries over Historical Data}},
booktitle = {ICDE},
year = {2016},
OPTpages = {1498-1500},
note = {To appear},
}
@Misc{taxivis,
key = {taxivis},
title = {{TaxiVis}},
howpublished = {\url{https://github.com/ViDA-NYU/TaxiVis}},
}
@Misc{ache,
key = {ache},
title = {{ACHE}},
howpublished = {\url{https://github.com/ViDA-NYU/ache}},
}
@article{doraiswamy@tvcg2014,
author = {Harish Doraiswamy and
Nivan Ferreira and
Theodoros Damoulas and
Juliana Freire and
Cl{\'{a}}udio T. Silva},
title = {{*}{Using Topological Analysis to Support Event-Guided Exploration in
Urban Data}},
journal = {{IEEE} Trans. Vis. Comput. Graph.{TVCG}},
volume = {20},
number = {12},
pages = {2634--2643},
year = {2014},
OPTurl = {http://dx.doi.org/10.1109/TVCG.2014.2346449},
OPTdoi = {10.1109/TVCG.2014.2346449},
OPTtimestamp = {Tue, 08 Mar 2016 09:04:37 +0100},
OPTbiburl = {http://dblp.uni-trier.de/rec/bib/journals/tvcg/DoraiswamyFDFS14},
OPTbibsource = {dblp computer science bibliography, http://dblp.org}
}
@Article{barbosa@bigdata2014,
title = {{*}{Structured Open Urban Data: Understanding the Landscape}},
author = {Luciano Barbosa and Kien Pham and Cl\'audio Silva and Marcos Vieira and Juliana Freire},
journal = {Big Data},
year = {2014},
OPTissn = {2157-6904},
volume = {2},
number = {3},
OPTissue_date = {September 2014},
OPTissue_description = {Special Section on Urban Computing},
OPTpublisher = {ACM},
OPTaddress = {New York, NY, USA},
}
@Misc{reprozip,
key = {reprozip},
title = {{ReproZip}},
howpublished = {https://github.com/ViDA-NYU/reprozip},
}
@inproceedings{murta@ipaw2014,
author = {Leonardo Murta and Vanessa Braganholo and Fernando
Seabra Chirigati and David Koop and Juliana Freire},
title = {noWorkflow: Capturing and Analyzing Provenance of Scripts},
booktitle = {IPAW},
year = {2014},
optnote = {To appear},
OPTpages = {11-23},
OPTee = {http://dx.doi.org/10.1007/978-3-642-34222-6_2},
OPTcrossref = {DBLP:conf/ipaw/2012},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{koop@tapp2014,
author = {David Koop and
Juliana Freire},
title = {{*}{Reorganizing Workflow Evolution Provenance}},
booktitle = {USENIX Workshop on the Theory and Practice of Provenance (TaPP)},
year = {2014},
note = {To appear},
OPTpages = {977-980},
OPTee = {http://doi.acm.org/10.1145/2463676.2465269},
OPTcrossref = {DBLP:conf/sigmod/2013},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@InProceedings{vu@dsmm2014,
author = {Tuan-Anh Hoang-Vu and Vicki Been and Ingrid Gould Ellen and Max Weselcouch and Juliana Freire},
title = {Towards Understanding Real-Estate Ownership in New
York City: Opportunities and Challenges},
OPTcrossref = {},
OPTkey = {},
booktitle = {Proceedings of the Workshop on Data Science for Macro-Modeling},
OPTpages = {},
year = {2014},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
OPTnote = {To appear},
OPTannote = {}
}
@article{chirigati@ieeedeb2013,
author = {Fernando Seabra Chirigati and
Matthias Troyer and
Dennis Shasha and
Juliana Freire},
title = {{*}{A Computational Reproducibility Benchmark}},
journal = {IEEE Data Eng. Bull.},
volume = {36},
number = {4},
year = {2013},
pages = {54-59},
ee = {http://sites.computer.org/debull/A13dec/p54.pdf},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@misc{birdvis,
key = {birdvis},
title = {{The BirdVis System}},
OPTyear = {2002},
OPTaccessed-date= {26/02/2011},
howpublished = {\url{http://www.birdvis.org}}
}
@article{taxivis@tvcg2013,
author = {Nivan Ferreira and Jorge Poco and Huy T. Vo and Juliana Freire and Claudio T. Silva},
title = {{*}{Visual Exploration of Big Spatio-Temporal Urban Data: A Study of New York City Taxi Trips}},
journal ={IEEE Transactions on Visualization and Computer Graphics},
volume = {19},
number = {12},
issn = {1077-2626},
year = {2013},
pages = {2149-2158},
doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2013.226},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
@Misc{vtanalogy@patent2011,
OPTkey = {},
author = {Freire, Juliana and Silva, Claudio and Koop,
David and Scheidegger, Carlos E. and Vo, Huy T.},
title = {Analogy based workflow identification},
howpublished = {U.S. Patent 8,060,39},
OPTmonth = {},
year = {2011},
OPTnote = {},
OPTannote = {}
}
@Misc{vtplugin@patent2012,
OPTkey = {},
author = {Freire, Juliana and Silva, Claudio and Callahan,
Steven P. and Scheidegger, Carlos E. and Vo, Huy T.},
title = {Enabling Provenance Management for Pre-Existing
Applications},
howpublished = {U.S. Patent 8,190,633},
OPTmonth = {},
year = {2012},
OPTnote = {},
OPTannote = {}
}
@inproceedings{chirigati@ipaw2012,
author = {Fernando Seabra Chirigati and
Juliana Freire},
title = {Towards Integrating Workflow and Database Provenance},
booktitle = {IPAW},
year = {2012},
pages = {11-23},
ee = {http://dx.doi.org/10.1007/978-3-642-34222-6_2},
OPTcrossref = {DBLP:conf/ipaw/2012},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{chirigati@sigmod2013,
author = {Fernando Seabra Chirigati and
Dennis Shasha and
Juliana Freire},
title = {Packing experiments for sharing and publication},
booktitle = {SIGMOD Conference},
year = {2013},
pages = {977-980},
ee = {http://doi.acm.org/10.1145/2463676.2465269},
OPTcrossref = {DBLP:conf/sigmod/2013},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{chirigati@tapp2013,
author = {Fernando Seabra Chirigati and
Dennis Shasha and
Juliana Freire},
title = {{*}{ReproZip: Using Provenance to Support Computational Reproducibility}},
booktitle = {USENIX Workshop on the Theory and Practice of Provenance (TaPP)},
year = {2013},
OPTpages = {977-980},
OPTee = {http://doi.acm.org/10.1145/2463676.2465269},
OPTcrossref = {DBLP:conf/sigmod/2013},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{chirigati@edbt2013,
author = {Fernando Seabra Chirigati and
Juliana Freire and
David Koop and
Cl{\'a}udio T. Silva},
title = {{*}{VisTrails provenance traces for benchmarking}},
booktitle = {EDBT/ICDT Workshops},
year = {2013},
pages = {323-324},
ee = {http://doi.acm.org/10.1145/2457317.2457373},
OPTcrossref = {DBLP:conf/edbt/2013w},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@INPROCEEDINGS{koop@pacvis2013,
author={Koop, D. and Freire, J. and Silva, C.T.},
booktitle={Visualization Symposium (PacificVis), 2013 IEEE Pacific},
title={Visual summaries for graph collections},
year={2013},
pages={57-64},
keywords={biology computing;data analysis;data structures;data visualisation;graph theory;biological pathways;computational workflows;data analysis;data representation;domain-specific comparison functions;graph collection;graph collections;highlight individual graphs;information representation;molecular structures;single summary graph;summary graph display;visual summaries;Color;Compounds;Data visualization;Heuristic algorithms;Layout;Matrices;Visualization},
doi={10.1109/PacificVis.2013.6596128},
ISSN={2165-8765},}
@InProceedings{chirigati@sbbd2009,
author = {Fernando Seabra Chirigati and Rafael Dahis and Sergio Manuel Serra da Cruz and Juliana Freire and Claudio Silva and Marta Mattoso},
title = {Desenvolvimento de Estruturas de Controle Expl\'icito para o SGWfC {VisTrails}},
OPTcrossref = {},
OPTkey = {},
booktitle = {Brazilian Symposium on Databases (SBBD)},
OPTpages = {},
year = {2009},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
note = {Best poster award},
OPTannote = {}
}
@inproceedings{uvcdat@ipaw2012,
author = {Emanuele Santos and David Koop and Thomas Maxwell and Charles Doutriaux and Tommy Ellqvist and Gerald Potter and Juliana Freire and Dean Williams and Claudio Silva},
title = {Designing a Provenance-Based Climate Data Analysis Application},
booktitle = {IPAW},
year = {2012},
pages = {214-219},
}
@article{alonso-letter@vldb2012,
author = {Gustavo Alonso and
Juliana Freire},
title = {Letter from the the Associate Editors},
journal = {PVLDB},
volume = {5},
number = {7},
year = {2012},
pages = {i-vii},
ee = {http://vldb.org/pvldb/vol5/frontmatterVol5No7.pdf},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@proceedings{amw2012,
editor = {Juliana Freire and
Dan Suciu},
title = {Proceedings of the 6th Alberto Mendelzon International Workshop
on Foundations of Data Management, Ouro Preto, Brazil, June
27-30, 2012},
booktitle = {AMW},
publisher = {CEUR-WS.org},
series = {CEUR Workshop Proceedings},
volume = {866},
year = {2012},
ee = {http://ceur-ws.org/Vol-866},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{freire@sigmod2012,
author = {Juliana Freire and
Philippe Bonnet and
Dennis Shasha},
title = {{*}{Computational reproducibility: state-of-the-art, challenges,
and database research opportunities}},
booktitle = {SIGMOD Conference},
year = {2012},
pages = {593-596},
OPTee = {http://doi.acm.org/10.1145/2213836.2213908},
OPTcrossref = {DBLP:conf/sigmod/2012},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{freire@cise2012,
author = {Juliana Freire and Cl\'audio T. Silva},
title = {{*}{Making Computations and Publications Reproducible with VisTrails}},
journal ={Computing in Science and Engineering},
volume = {14},
number = {4},
issn = {1521-9615},
year = {2012},
pages = {18-25},
doi = {http://doi.ieeecomputersociety.org/10.1109/MCSE.2012.76},
publisher = {IEEE Computer Society},
OPTaddress = {Los Alamitos, CA, USA},
}
@article{nguyen@vldb2012,
author = {Thanh Nguyen and
Viviane Moreira and
Huong Nguyen and Hoa Nguyen and Juliana Freire},
title = {{*}{Multilingual Schema Matching for Wikipedia Infoboxes}},
journal = {PVLDB},
OPTvolume = {4},
OPTnumber = {7},
year = {2012},
note = {Conditionally accepted},
OPTpages = {409-418},
OPTee = {http://www.vldb.org/pvldb/vol4/p409-nguyen.pdf},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{bonnet@sigrec2011,
author = {Philippe Bonnet and
Stefan Manegold and
Matias Bj{\o}rling and
Wei Cao and
Javier Gonzalez and
Joel Granados and
Nancy Hall and
Stratos Idreos and
Milena Ivanova and
Ryan Johnson and
David Koop and
Tim Kraska and
Ren{\'e} M{\"u}ller and
Dan Olteanu and
Paolo Papotti and
Christine Reilly and
Dimitris Tsirogiannis and
Cong Yu and
Juliana Freire and
Dennis Shasha},
title = {Repeatability and workability evaluation of SIGMOD 2011},
journal = {SIGMOD Record},
volume = {40},
number = {2},
year = {2011},
pages = {45-48},
ee = {http://doi.acm.org/10.1145/2034863.2034873},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@article {silva@CGF2011,
author = {Silva, Cláudio T. and Anderson, Erik and Santos, Emanuele and Freire, Juliana},
title = {{*}{Using VisTrails and Provenance for Teaching Scientific Visualization}},
journal = {Computer Graphics Forum},
publisher = {Blackwell Publishing Ltd},
OPTissn = {1467-8659},
OPTurl = {http://dx.doi.org/10.1111/j.1467-8659.2010.01830.x},
OPTdoi = {10.1111/j.1467-8659.2010.01830.x},
volume = {30},
number = {1},
pages = {75-84},
keywords = {provenance, scientific visualization, education},
keywords = {K.3 [Computer and Education]: General},
year = {2011},
}
@InProceedings{vo@ldav2011,
author = {H. T. Vo and J. Bronson and B. Summa and J. Comba and J. Freire and B. Howe and V. Pascucci and and C. Silva},
title = {{*}{Parallel Visualization on Large Clusters using MapReduce}},
OPTcrossref = {},
OPTkey = {},
booktitle = {Proceedings of IEEE Symposium on Large-Scale Data Analysis and Visualization (LDAV)},
pages = {81-88},
year = {2011},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
OPTannote = {}
}
@article{birdvis@tvcg2011,
author = {Nivan Ferreira and Lauro Lins and Daniel Fink and Steve Kelling and Chris Wood and Juliana Freire and Cl\'audio Silva},
title = {{*}{BirdVis: Visualizing and Understanding Bird Populations}},
journal = {IEEE Transactions on Visualization and Computer Graphics},
volume = {17},
issn = {1077-2626},
year = {2011},
pages = {2374-2383},
OPTpages = {1539-1546}}
@Misc{freire@career-report2011,
author = {Juliana Freire},
title = {CAREER: Storing, Querying and Re-Using Provenance of Computational Tasks},
year = {2011},
note = {Project annual report}
}
@Misc{koop@submitted2011,
OPTkey = {},
author = {D. Koop and J. Freire and C. Silva},
title = {Visual Summaries for Graph Collections},
howpublished = {Submitted},
OPTmonth = {},
year = {2011},
OPTnote = {},
OPTannote = {}
}
@InBook{freire@aosa2011,
author = {J. Freire and D. Koop and E. Santos and C. Scheidegger and C. Silva and H. T. Vo},
OPTeditor = {Amy Brown and Greg Wilson},
title = {{*}{The Architecture of Open Source Applications}},
chapter = {VisTrails},
publisher = {Lulu.com},
year = {2011},
OPTkey = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTtype = {},
OPTaddress = {},
OPTedition = {},
OPTmonth = {},
OPTpages = {},
OPTnote = {},
OPTannote = {}
}
@TechReport{lins@sci2011,
author = {L. Lins and D. Koop and J. Freire and C. Silva},
title = {DEFOG: A System for Data-Backed Visual Composition},
institution = {SCI Institute, University of Utah},
year = {2011},
OPTkey = {},
OPTtype = {},
number = {2011-003},
OPTaddress = {},
OPTmonth = {},
OPTnote = {},
OPTannote = {}
}
@article{freire@vldb2011,
author = {Juliana Freire and
Philippe Bonnet and
Dennis Shasha},
title = {{*}{Exploring the Coming Repositories of Reproducible Experiments:
Challenges and Opportunities}},
journal = {PVLDB},
volume = {4},
number = {12},
year = {2011},
pages = {1494-1497},
ee = {http://www.vldb.org/pvldb/vol4/p1494-freire.pdf},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{nguyen@vldb2011,
author = {Hoa Nguyen and
Ariel Fuxman and
Stelios Paparizos and
Juliana Freire and
Rakesh Agrawal},
title = {Synthesizing Products for Online Catalogs},
journal = {PVLDB},
volume = {4},
number = {7},
year = {2011},
pages = {409-418},
OPTee = {http://www.vldb.org/pvldb/vol4/p409-nguyen.pdf},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{opm@fgcs2011,
title = "The Open Provenance Model core specification (v1.1)",
journal = "Future Generation Computer Systems",
volume = "In Press, Corrected Proof",
number = "27",
pages = "6",
year = "2011",
note = "",
OPTissn = "0167-739X",
OPTdoi = "DOI: 10.1016/j.future.2010.07.005",
OPTurl = "http://www.sciencedirect.com/science/article/B6V06-50J9GPP-3/2/09d841ac888ed813ccc3cce84383ce27",
author = "Luc Moreau and Ben Clifford and Juliana Freire and Joe Futrelle and Yolanda Gil and Paul Groth and Natalia Kwasnikowska and Simon Miles and Paolo Missier and Jim Myers and Beth Plale and Yogesh Simmhan and Eric Stephan and Jan Van den Bussche",
keywords = "Provenance",
keywords = "Representation",
keywords = "Inter-operability"
}
@InProceedings{mates@ssdbm2011,
author = {Phillip Mates and
Emanuele Santos and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{CrowdLabs: Social Analysis and Visualization for the Sciences}},
booktitle = {SSDBM},
year = {2011},
pages = {555-564},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{koop@iccs2011,
title = "{*}{A Provenance-Based Infrastructure to Support the Life Cycle of Executable Papers}",
journal = "Procedia Computer Science",
volume = "4",
OPTnumber = "",
pages = "648-657",
year = "2011",
note = "Proceedings of the International Conference on Computational Science, ICCS 2011",
issn = "1877-0509",
doi = "DOI: 10.1016/j.procs.2011.04.068",
OPTurl = "http://www.sciencedirect.com/science/article/pii/S1877050911001268",
author = "David Koop and Emanuele Santos and Phillip Mates and Huy T. Vo and Philippe Bonnet and Bela Bauer and Brigitte Surer and Matthias Troyer and Dean N. Williams and Joel E. Tohline and Juliana Freire and Cláudio T. Silva",
keywords = "executable paper",
keywords = "reproducibility",
keywords = "provenance",
keywords = "scientific workflows"
}
@article{bauer@jstat2011,
OPTauthor={B Bauer and L D Carr and H G Evertz and A Feiguin and J Freire and S Fuchs and L Gamper and J Gukelberger and E Gull and S Guertler and A
Hehn and R Igarashi and S V Isakov and D Koop and P N Ma and P Mates and H Matsuo and O Parcollet and G Pawłowski and J D Picon and L
Pollet and E Santos and V W Scarola and U Schollwöck and C Silva and B Surer and S Todo and S Trebst and M Troyer and M L Wall and P
Werner and S Wessel},
author={B. Bauer and others},
title={The ALPS project release 2.0: open source software for strongly correlated systems},
journal={Journal of Statistical Mechanics: Theory and Experiment},
volume={2011},
number={05},
pages={P05001},
url={http://stacks.iop.org/1742-5468/2011/i=05/a=P05001},
year={2011},
abstract={We present release 2.0 of the ALPS (Algorithms and Libraries for Physics Simulations) project, an open source software project to develop libraries and application programs for the simulation of strongly correlated quantum lattice models such as quantum magnets, lattice bosons, and strongly correlated fermion systems. The code development is centered on common XML and HDF5 data formats, libraries to simplify and speed up code development, common evaluation and plotting tools, and simulation programs. The programs enable non-experts to start carrying out serial or parallel numerical simulations by providing basic implementations of the important algorithms for quantum lattice models: classical and quantum Monte Carlo (QMC) using non-local updates, extended ensemble simulations, exact and full diagonalization (ED), the density matrix renormalization group (DMRG) both in a static version and a dynamic time-evolving block decimation (TEBD) code, and quantum Monte Carlo solvers for dynamical mean field theory (DMFT). The ALPS libraries provide a powerful framework for programmers to develop their own applications, which, for instance, greatly simplify the steps of porting a serial code onto a parallel, distributed memory machine. Major changes in release 2.0 include the use of HDF5 for binary data, evaluation tools in Python, support for the Windows operating system, the use of CMake as build system and binary installation packages for Mac OS X and Windows, and integration with the VisTrails workflow provenance tool. The software is available from our web server at http://alps.comp-phys.org/ [http://alps.comp-phys.org/] .}
}
@Manual{OLDvt-users-guide,
title = {VisTrails Users' Guide},
key = {vistrails},
OPTauthor = {},
OPTorganization = {},
OPTaddress = {},
OPTedition = {},
OPTmonth = {},
OPTyear = {},
note = {\url{http://downloads.sourceforge.net/project/vistrails/vistrails/v1.6/vistrails-usersguide-1.6-rev215.pdf}},
OPTannote = {}
}
@PhdThesis{koop2011,
author = {David Koop},
title = {Managing Provenance for Knowledge Discovery and Re-use},
school = {University of Utah},
year = {2011},
}
@PhdThesis{santos2010,
author = {Emanuele Santos},
title = {Simplifying the Creation and Deployment of Collaborative Data Analysis and Visualization Tools},
school = {University of Utah},
year = {2010},
}
@PhdThesis{scheidegger2009,
author = {Carlos Scheidegger},
title = {Digital Provenance in Scientific Visualization Systems},
school = {University of Utah},
year = {2009},
}
@misc{opm2007,
month = {December},
title = {The Open Provenance Model (v1.00)},
author = {Luc Moreau and Juliana Freire and Joe Futrelle and Robert McGrath and Jim Myers and Patrick Paulson},
year = {2007},
note = {\url{http://eprints.ecs.soton.ac.uk/14979}}
}
@misc{opm2008,
month = {July},
title = {The Open Provenance Model (v1.01)},
author = {Luc Moreau and Beth Plale and Simon Miles and
Carole Goble and Paolo Missier and Roger Barga and
Yogesh Simmhan and Joe Futrelle and Robert McGrath
and Jim Myers and Patrick Paulson and Shawn Bowers
and Bertram Ludaescher and Natalia Kwasnikowska and
Jan Van den Bussche and Tommy Ellkvist and Juliana
Freire,and Paul Groth},
year = {2008},
note = {\url{http://eprints.ecs.soton.ac.uk/16148}}
}
@inproceedings{nguyen@cikm2010,
author = {Thanh Hoang Nguyen and
Hoa Nguyen and
Juliana Freire},
title = {PruSM: a prudent schema matching approach for web forms},
booktitle = {CIKM},
year = {2010},
pages = {1385-1388},
OPTee = {http://doi.acm.org/10.1145/1871437.1871627},
OPTcrossref = {DBLP:conf/cikm/2010},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@Misc{santos@cscw2010,
OPTkey = {},
author = { Emanuele Santos and Phillip Mates and Erik Anderson and Brad Grimm and Juliana Freire and Claudio Silva },
title = {Towards Supporting Collaborative Data Analysis and Visualization in a Coastal Margin Observatories},
howpublished = {ACM CSCW Workshop on The Changing Dynamics of Scientific Collaborations},
OPTmonth = {},
year = {2010},
OPTnote = {Submitted},
OPTannote = {}
}
@Misc{santos@submitted2010,
OPTkey = {},
author = {Emanuele Santos and Phillip Mates and Juliana Freire and Cl\'audio Silva},
title = {CrowdLabs: Social Analysis and Visualization for the Sciences},
OPThowpublished = {},
OPTmonth = {},
OPTyear = {},
note = {Submitted},
OPTannote = {}
}
@Misc{koop@submitted2010,
OPTkey = {},
author = {David Koop and Juliana Freire and Cl\'audio Silva},
title = {Efficient Evaluation of Exploratory Queries over Provenance Collections},
OPThowpublished = {},
OPTmonth = {},
OPTyear = {},
note = {Submitted},
OPTannote = {}
}
@InProceedings{barbosa@webdb2010,
author = {Luciano Barbosa and Juliana Freire},
title = {{{*}Using Latent-Structure to Detect Objects on the Web}},
booktitle = {Proceedings of WebDB},
OPTpages = {1-6},
year = {2010},
OPTnote = {}
}
@InProceedings{nguyen@webdb2010,
author = {Huong Nguyen and Thanh Nguyen and Hoa Nguyen and Juliana Freire},
title = {{{*}Querying Wikipedia Documents and Relationships}},
booktitle = {Proceedings of WebDB},
OPTpages = {1-6},
year = {2010},
OPTnote = {}
}
@inproceedings{deeppeep@sigmod2010,
author = {Luciano Barbosa and
Hoa Nguyen and
Thanh Nguyen and
Ramesh Pinnamaneni and
Juliana Freire},
title = {{*}{Creating and exploring web form repositories}},
booktitle = {SIGMOD Conference},
year = {2010},
pages = {1175-1178},
OPTee = {http://doi.acm.org/10.1145/1807167.1807311},
OPTcrossref = {DBLP:conf/sigmod/2010},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{barbosa@jidm2010,
author = {Luciano Barbosa and
Juliana Freire},
title = {{*}{Siphoning Hidden-Web Data through Keyword-Based Interfaces}},
journal = {JIDM},
volume = {1},
number = {1},
year = {2010},
pages = {133-144},
ee = {http://seer.lcc.ufmg.br/index.php/jidm/article/view/18},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{barbosa-retro@jidm2010,
author = {Luciano Barbosa and
Juliana Freire},
title = {{*}{Siphoning Hidden-Web Data through Keyword-Based Interfaces:
Retrospective}},
journal = {JIDM},
volume = {1},
number = {1},
year = {2010},
pages = {145-146},
ee = {http://seer.lcc.ufmg.br/index.php/jidm/article/view/19},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{silva@eg2010,
author = {Cl{\'a}udio T. Silva and Erik Anderson and Emanuele Santos and
Juliana Freire},
title = {{*}{Using VisTrails and Provenance for Teaching Scientific Visualization}},
booktitle = {Proceedings of the Eurographics Education Program},
year = {2010},
OPTpages = {292-301},
note = {Best paper award},
}
@inproceedings{koop@ssdbm2010,
author = {David Koop and
Emanuele Santos and
Bela Bauer and Matthias Troyer and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {Bridging Workflow and Data Provenance using Strong Links},
booktitle = {SSDBM},
year = {2010},
pages = {397-415},
}
@inproceedings{koop@ipaw2010,
author = {David Koop and
Carlos Scheidegger and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{The Provenance of Workflow Upgrades}},
booktitle = {IPAW},
year = {2010},
pages = {2-16},
}
@InProceedings{santos@escience2009,
author = {Emanuele Santos and Juliana Freire and Claudio Silva and
Ayla Khan and Julien Tierny and Brad Grimm and Lauro Lins and Valerio
Pascucci and Scott A. Klasky" and Roselyne D. Barreto and Norbert
Podhorszki },
title = {Enabling Advanced Visualization Tools in a Simulation
Monitoring System},
booktitle = {Proceedings of the 5th IEEE International Conference
on e-Science},
pages = {358-365},
year = {2009},
month = {December},
organization = {IEEE},
}
@InCollection{ludascher@book2009,
author = {Bertram Lud\"ascher and Ilkay Altintas and Shawn
Bowers and Julian Cummings and Terence Critchlow and
Ewa Deelman and David De Roure and Juliana Freire
and Carole Goble and Matthew Jones and Scott Klasky
and Timothy McPhillips and Norbert Podhorszki and
Claudio Silva and Ian Taylor and Mladen Vouk},
title = {Scientific Process Automation and Workflow Management},
booktitle = {Scientific Data Management},
publisher = {Chapman \& Hall},
year = 2009,
editor = {Arie Shoshani and Doron Rotem},
series = {Computational Science Series},
chapter = 13}
@proceedings{freire@SWPM2009,
editor = {Juliana Freire and Paolo Missier and Satya Sanket Sahoo},
title = {Proceedings of the First International Workshop on the role of Semantic Web in Provenance Management (SWPM 2009)},
OPTbooktitle = {IPAW},
OPTpublisher = {Springer},
OPTseries = {Lecture Notes in Computer Science},
OPTvolume = {5272},
year = {2009}
}e
@InProceedings{escience2,
author = {Emanuele Santos and Juliana Freire and Claudio Silva and
Ayla Khan and Julien Tierny and Brad Grimm and Lauro Lins and Valerio
Pascucci and Scott A. Klasky" and Roselyne D. Barreto and Norbert
Podhorszki },
title = {Enabling Advanced Visualization Tools in a Simulation
Monitoring System},
booktitle = {Proceedings of the 5th IEEE International Conference
on e-Science},
pages = {358-365},
year = {2009},
month = {December},
organization = {IEEE},
}
@Misc{paraview-plugin@kitwaresource2009,
OPTkey = {},
author = {Cl\'audio Silva and Juliana Freire and John Schreiner},
title = {Introducing the VisTrails Provenance Explorer Plugin for ParaView},
howpublished = {Kitware Source},
month = {July},
year = {2009},
note = {http://www.kitware.com/products/archive/kitware\_quarterly0709.pdf},
OPTannote = {}
}
@misc{clue2009,
OPTmonth = {December},
title = {A Science Cloud on your Desktop: VisTrails + GridFields},
author = {Bill Howe and Claudio Silva and Juliana Freire},
year = {2009},
note = {\url{http://clue.cs.washington.edu}}
}
@article{anderson@cise2008,
author = {Erik W. Anderson and James P. Ahrens and Katrin Heitmann and Salman Habib and Cl\'audio T. Silva},
title = {Provenance in Comparative Analysis: A Study in Cosmology},
journal ={Computing in Science and Engineering},
volume = {10},
number = {3},
issn = {1521-9615},
year = {2008},
pages = {30-37},
doi = {http://doi.ieeecomputersociety.org/10.1109/MCSE.2008.80},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
@InProceedings{santos@chi2009,
author = {Emanuele Santos and Juliana Freire and Claudio Silva},
title = {Information Sharing in Science 2.0: Challenges and
Opportunities},
booktitle = {ACM CHI Workshop on The Changing Face of Digital Science: New Practices in Scientific Collaborations},
OPTnote = {available at: https://acs.lbl.gov/chi09collab/index.php/Publications},
year = {2009},
}
@InProceedings{freire@scidac2009,
author = {Juliana Freire, Emanuele Santos and Cl\'audio Silva},
title = {Provenance-Enabled Data Exploration and Visualization with VisTrails},
OPTkey = {},
booktitle = {SciDAC},
OPTpages = {},
year = {2009},
OPTeditor = {},
volume = {125},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
OPTnote = {Refereed tutorial},
annote = {Supporting material available at http://www.vistrails.org/index.php/Tutorials/SciDAC}
}
@InProceedings{silva-tutorial@vis2009,
author = {Cl\'audio Silva and Juliana Freire and Emanuele Santos and Erik Anderson and David Koop},
title = {Provenance-Enabled Data Exploration and Visualization},
OPTkey = {},
booktitle = {IEEE Visualization Conference},
OPTpages = {},
year = {2009},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
note = {Refereed tutorial},
annote = {Supporting material available at http://www.vistrails.org/index.php/Tutorials/Vis2009}
}
@InProceedings{freire@escience2008,
author = {Juliana Freire and Cl\'audio Silva},
title = {Streamlining Data Exploration and Visualization through Scientific Workflows and Provenance},
OPTkey = {},
booktitle = {IEEE International Conference on e-Science},
OPTpages = {},
year = {2008},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
note = {Refereed tutorial},
OPTannote = {}
}
@Misc{spw@slc2008,
key = {Symposium},
author = {James Cheney and Juliana Freire and Bertram Ludaescher},
title = {Symposium on Provenance in Workflows},
OPThowpublished = {},
OPTmonth = {},
year = {2008},
note = {http://wiki.esi.ac.uk/ProvenanceInWorkflows}
}
@article{santos@tvcg2009,
author = {Emanuele Santos and Lauro Lins and James Ahrens and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{VisMashup: Streamlining the Creation of Custom Visualization
Applications}},
journal = {IEEE Transactions on Visualization and Computer Graphics},
volume = {15},
number = {6},
year = {2009},
pages = {1539-1546}}
@article{ellkvist@ieeesciflow2009,
author = {Tommy Ellqvist and David Koop and Juliana Freire and Claudio Silva and Lena Stromback},
title = {Using Mediation to Achieve Provenance Interoperability},
journal ={IEEE Congress on Services},
OPTvolume = {0},
OPTisbn = {978-0-7695-3708-5},
year = {2009},
pages = {291-298},
OPTdoi = {http://doi.ieeecomputersociety.org/10.1109/SERVICES-I.2009.68},
OPTxpublisher = {IEEE Computer Society},
OPTaddress = {Los Alamitos, CA, USA},
}
@inproceedings{ellkvist@keys2009,
author = {Ellkvist, Tommy and Str\"{o}mb\"{a}ck, Lena and Lins, Lauro Didier and Freire, Juliana},
title = {A first study on strategies for generating workflow snippets},
booktitle = {Proceedings of the ACM SIGMOD Intenational Workshop on Keyword Search on
Structured Data (KEYS)},
year = {2009},
OPTisbn = {978-1-60558-570-3},
pages = {15-20},
OPTlocation = {Providence, Rhode Island},
OPTdoi = {http://doi.acm.org/10.1145/1557670.1557678},
OPTpublisher = {ACM},
OPTaddress = {New York, NY, USA},
}
@inproceedings{freire@btw2009,
author = {Juliana Freire},
title = {Provenance Management: Challenges and Opportunities},
booktitle = {Datenbanksysteme in Business, Technologie
und Web (BTW)},
year = {2009},
pages = {4}
}
@inproceedings{santos@ssdbm2009,
author = {Emanuele Santos and
David Koop and
Huy T. Vo and
Erik W. Anderson and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{Using Workflow Medleys to Streamline Exploratory Tasks}},
booktitle = {SSDBM},
year = {2009},
pages = {292-301},
OPTee = {http://dx.doi.org/10.1007/978-3-642-02279-1_23},
OPTcrossref = {DBLP:conf/ssdbm/2009},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{koop@tvcg2008,
author = {David Koop and
Carlos Eduardo Scheidegger and
Steven P. Callahan and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{VisComplete: Automating Suggestions for Visualization Pipelines}},
journal = {IEEE Transactions on Visualization and Computer Graphics},
volume = {14},
number = {6},
year = {2008},
pages = {1691-1698}}
@InProceedings{freire@chi2008,
author = {Juliana Freire and Claudio Silva},
title = {{*}{Towards Enabling Social Analysis of Scientific Data}},
booktitle = {ACM CHI Social Data Analysis Workshop},
OPTpages = {},
year = {2008},
}
@article{freire@cise2008,
author = {Juliana Freire and David Koop and Emanuele Santos and Cl\'audio T. Silva},
title = {{*}{Provenance for Computational Tasks: A Survey}},
journal ={Computing in Science and Engineering},
volume = {10},
number = {3},
issn = {1521-9615},
year = {2008},
pages = {11-21},
OPTdoi = {http://doi.ieeecomputersociety.org/10.1109/MCSE.2008.79},
publisher = {IEEE Computer Society},
OPTaddress = {Los Alamitos, CA, USA},
}
@article{silva@jphysics2008,
author = {Cl\'audio T. Silva and Juliana Freire},
title = {{*}{Software Infrastructure for exploratory visualization and data analysis: past, present, and future}},
journal ={Journal of Physics: Conference Series},
volume = {25},
pages={012100 (15pp)},
OPTumber = {3},
OPTissn = {1521-9615},
year = {2008},
note = {SciDAC 2008 Conference},
OPTnote = {synonyms: Silva:2008:SIF},
OPTpages = {11-21},
OPTdoi = {http://dx.doi.org/10.1088/1742-6596/125/1/012100},
}
@InProceedings{freire@msescience2008,
author = {Juliana Freire and Cl\'audio Silva},
title = {{*}{Simplifying the Design of Workflows for Large-Scale Data Exploration and Visualization}},
booktitle = {Proceedings of the Microsoft eScience Workshop},
OPTpages = {},
year = {2008},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
OPTnote = {},
OPTannote = {}
}
@inproceedings{ellkvist@escience2008,
author = {Tommy Ellkvist and David Koop and Juliana Freire and Cl\'audio
Silva and Lena Str\"ombäck},
title = {{*}{Using Mediation to Achieve Provenance Interoperability (Extended Abstract)}},
booktitle ={IEEE International Conference on eScience},
OPTvolume = {0},
year = {2008},
OPTisbn = {978-0-7695-3535-7},
pages = {398-399},
OPTdoi = {http://doi.ieeecomputersociety.org/10.1109/eScience.2008.100},
OPTpublisher = {IEEE Computer Society},
OPTaddress = {Los Alamitos, CA, USA},
}
@inproceedings{howe@escience2008,
author = {Bill Howe and Peter Lawson and Renee Bellinger and Erik Anderson and Emanuele Santos and Juliana Freire and Carlos Scheidegger and Ant\'onio Baptista and Cl\'audio Silva},
title = {{*}{End-to-End eScience: Integrating Workflow, Query, Visualization, and Provenance at an Ocean Observatory}},
booktitle ={IEEE International Conference on eScience},
OPTvolume = {0},
year = {2008},
OPTisbn = {978-0-7695-3535-7},
pages = {127-134},
OPTdoi = {http://doi.ieeecomputersociety.org/10.1109/eScience.2008.67},
OPTpublisher = {IEEE Computer Society},
OPTaddress = {Los Alamitos, CA, USA},
}
@article{baptista@cise2008,
author = {Ant\'onio Baptista and Bill Howe and Juliana Freire and David Maier and Cl\'audio T. Silva},
title = {{*}{Scientific Exploration in the Era of Ocean Observatories}},
journal ={Computing in Science and Engineering},
volume = {10},
number = {3},
issn = {1521-9615},
year = {2008},
pages = {53-58},
OPTdoi = {http://doi.ieeecomputersociety.org/10.1109/MCSE.2008.83},
OPTpublisher = {IEEE Computer Society},
OPTaddress = {Los Alamitos, CA, USA},
}
@inproceedings{davidson@sigmod2008,
author = {Susan B. Davidson and Juliana Freire},
title = {{*}{Provenance and scientific workflows: challenges and opportunities}},
OPTbooktitle = {SIGMOD '08: Proceedings of the 2008 ACM SIGMOD international conference on Management of data},
booktitle = sigmod,
year = {2008},
OPTisbn = {978-1-60558-102-6},
pages = {1345-1350},
OPTlocation = {Vancouver, Canada},
OPTdoi = {http://doi.acm.org/10.1145/1376616.1376772},
OPTpublisher = {ACM},
OPTaddress = {New York, NY, USA},
}
@inproceedings{scheidegger@sigmod2008,
author = {Carlos Eduardo Scheidegger and
Huy T. Vo and
David Koop and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{Querying and re-using workflows with VisTrails}},
booktitle = sigmod,
year = {2008},
pages = {1251-1254}
}
@proceedings{freire@ipaw-proc2008,
editor = {Juliana Freire and
David Koop and
Luc Moreau},
title = {Provenance and Annotation of Data and Processes, Second
International Provenance and Annotation Workshop, IPAW 2008,
Salt Lake City, UT, USA, June 17-18, 2008. Revised Selected
Papers},
booktitle = {IPAW},
publisher = {Springer},
series = {Lecture Notes in Computer Science},
volume = {5272},
year = {2008}
}
@inproceedings{ellkvist@ipaw2008,
author = {Tommy Ellkvist and
David Koop and
Erik W. Anderson and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {Using Provenance to Support Real-Time Collaborative Design
of Workflows},
booktitle = {IPAW},
year = {2008},
pages = {266-279},
OPTee = {http://dx.doi.org/10.1007/978-3-540-89965-5_27},
OPTcrossref = {DBLP:conf/ipaw/2008},
OPTbibsource = {DBLP, http://dblp.uni-trier.de},
}
@inproceedings{lins@ssdbm2008,
author = {Lauro Lins and
David Koop and
Erik W. Anderson and
Steven P. Callahan and
Emanuele Santos and
Carlos Eduardo Scheidegger and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {Examining Statistics of Workflow Evolution Provenance: A
First Study},
booktitle = {SSDBM},
year = {2008},
pages = {573-579}
}
@inproceedings{santos@ipaw2008,
author = {Emanuele Santos and
Lauro Lins and
James P. Ahrens and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{A First Study on Clustering Collections of Workflow Graphs}},
booktitle = {IPAW},
year = {2008},
pages = {160-173},
OPTee = {http://dx.doi.org/10.1007/978-3-540-89965-5_18},
OPTcrossref = {DBLP:conf/ipaw/2008},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{moreau@ipaw2008,
author = {Luc Moreau and
Juliana Freire and
Joe Futrelle and
Robert E. McGrath and
Jim Myers and
Patrick Paulson},
title = {The Open Provenance Model: An Overview},
booktitle = {IPAW},
year = {2008},
pages = {323-326}
}
@Proceedings{ipaw2008,
title = {International Provenance and Annotation Workshopt},
year = {2008},
OPTkey = {},
OPTbooktitle = {},
editor = {Juliana Freire and David Koop and Luc Moreau},
OPTvolume = {},
number = {5272},
series = {LNCS},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
OPTannote = {}
}
@inproceedings{callahan@ipaw2008,
author = {Steven P. Callahan and
Juliana Freire and
Carlos Eduardo Scheidegger and
Cl{\'a}udio T. Silva and
Huy T. Vo},
title = {{*}{Towards Provenance-Enabling ParaView}},
booktitle = {IPAW},
year = {2008},
pages = {120-127}
}
@article{scheidegger@ccpe2008,
author = {Carlos Eduardo Scheidegger and
David Koop and
Emanuele Santos and
Huy T. Vo and
Steven P. Callahan and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{Tackling the Provenance Challenge one layer at a time}},
journal = {Concurrency and Computation: Practice and Experience},
volume = {20},
number = {5},
year = {2008},
pages = {473-483}
}
@article{moreau@ccpe2008,
author = {Luc Moreau and
Bertram Lud{\"a}scher and
Ilkay Altintas and
Roger S. Barga and
Shawn Bowers and
Steven P. Callahan and
George Chin Jr. and
Ben Clifford and
Shirley Cohen and
Sarah Cohen Boulakia and
Susan B. Davidson and
Ewa Deelman and
Luciano A. Digiampietri and
Ian T. Foster and
Juliana Freire and
James Frew and
Joe Futrelle and
Tara Gibson and
Yolanda Gil and
Carole A. Goble and
Jennifer Golbeck and
Paul T. Groth and
David A. Holland and
Sheng Jiang and
Jihie Kim and
David Koop and
Ales Krenek and
Timothy M. McPhillips and
Gaurang Mehta and
Simon Miles and
Dominic Metzger and
Steve Munroe and
Jim Myers and
Beth Plale and
Norbert Podhorszki and
Varun Ratnakar and
Emanuele Santos and
Carlos Eduardo Scheidegger and
Karen Schuchardt and
Margo I. Seltzer and
Yogesh L. Simmhan and
Cl{\'a}udio T. Silva and
Peter Slaughter and
Eric G. Stephan and
Robert Stevens and
Daniele Turi and
Huy T. Vo and
Michael Wilde and
Jun Zhao and
Yong Zhao},
title = {Special Issue: The First Provenance Challenge},
journal = {Concurrency and Computation: Practice and Experience},
volume = {20},
number = {5},
year = {2008},
pages = {409-418}
}
@InProceedings{freire@sbbd2007,
author = {Juliana Freire and Cl\'audio Silva},
title = {Provenance Management: Challenges and Opportunities},
OPTkey = {},
booktitle = {Brazilian Symposium on Dababases},
OPTpages = {},
year = {2007},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
note = {Invited tutorial},
annote = {Supporting material available at http://www.vistrails.org/index.php/Tutorials/SBBD2007}
}
@article{davidson@deb2007,
author = {Susan B. Davidson and
Sarah Cohen Boulakia and
Anat Eyal and
Bertram Lud{\"a}scher and
Timothy M. McPhillips and
Shawn Bowers and
Manish Kumar Anand and
Juliana Freire},
title = {Provenance in Scientific Workflow Systems},
journal = {IEEE Data Eng. Bull.},
volume = {30},
number = {4},
year = {2007},
pages = {44-50},
OPTee = {http://sites.computer.org/debull/A07dec/susan.pdf},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@Article{silva@cise2007,
author = {Cl\'audio Silva and Juliana Freire and Steven P. Callahan},
title = {{*}{Provenance for Visualizations: Reproducibility and Beyond}},
journal = {Computing in Science \& Engineering},
year = {2007},
OPTkey = {},
volume = {9},
number = {5},
pages = {82-89},
OPTmonth = {September/October},
OPTannote = {}
}
@Article{scheidegger@tvcg2007,
author = {Carlos Eduardo Scheidegger and
Huy T. Vo and
David Koop and
Juliana Freire and
Cl{\'a}udio T. Silva},
title = {{*}{Querying and Creating Visualizations by Analogy}},
journal = {IEEE Transactions on Visualization and Computer Graphics},
volume = {13},
number = {6},
pages = {1560-1567},
year = {2007}
}
@InProceedings{vt@dils2007,
author = {Erik Anderson and Steven P. Callahan and
David A. Koop and Emanuele Santos and Carlos E. Scheidegger and
Huy T. Vo and Juliana Freire and Cl\'audio T. Silva},
title = {{*}{VisTrails: Using Provenance to Streamline Data Exploration}},
booktitle = {Poster Proceedings of the International Workshop on
Data Integration in the Life Sciences (DILS)},
pages = {8},
year = {2007},
OPTnote = {Invited for oral presentation.},
}
@InProceedings{freire@ipaw2006,
author = {Juliana Freire and Cl\'audio Silva and Steve
Callahan and Emanuele Santos and Carlos Scheidegger and
Huy Vo},
title = {{*}{Managing Rapidly-Evolving Scientific Workflows}},
booktitle = {International Provenance and Annotation Workshop
(IPAW)},
pages = {10--18},
year = 2006,
series = {LNCS 4145},
publisher = {Springer Verlag},
OPTnote = {synonyms: Freire:2006:MRE, Freire:2006:IPAW}
}
@InProceedings{callahan@sciflow2006,
author = {Steve Callahan and Juliana Freire and Emanuele Santos and
Carlos Scheidegger and Cl\'audio Silva and Huy Vo},
title = {{*}{Managing the Evolution of Dataflows with VisTrails
\emph{(Extended Abstract)}}},
booktitle = {IEEE Workshop on Workflow and Data Flow for
Scientific Applications (SciFlow)},
year = 2006,
OPTnote = { synonyms: Callahan:2006:MTE}
}
@InProceedings{Gilbert:2006:VUW,
author = {Robert B. Gilbert and Fulvio Tonon and Juliana Freire and
Cl\'audio Silva and David R. Maidment},
title = {Visualizing Uncertainty with Uncertainty Multiples},
booktitle = {GeoCongress 2006: Geotechnical Engineering in the
Information Technology Age},
pages = {1--6},
year = 2006,
publisher = {ASCE},
}
@InProceedings{eide@usenix2006,
author = "Eric Eide and Tim Stack and Leigh Stoller and
Juliana Freire and Jay Lepreau",
title = "{{*}{Integrated scientific workflow management for the
Emulab network testbed}}",
pages = "363--368",
year = 2006,
booktitle = {Proceedings of USENIX},
}
@TechReport{vt-exp,
author = {S. Callahan and J. Freire and E. Santos and C. Scheidegger and C. Silva and H. Vo},
title = {Using Provenance to Streamline Data Exploration through Visualization},
institution = scishort,
year = {2006},
OPTkey = {},
OPTtype = {},
number = {UUSCI-2006-016},
OPTaddress = {},
OPTmonth = {},
OPTnote = {},
OPTannote = {}
}
@InProceedings{callahan@sigmod2006,
author = {Steve Callahan and Juliana Freire and Emanuele Santos and Carlos Scheidegger and Cl\'audio Silva and Huy Vo},
title = {{{*}VisTrails: Visualization meets Data Management}},
booktitle = {Proceedings of ACM SIGMOD},
pages = {745--747},
year = 2006,
}
@InProceedings{bavoil@vis2005,
author = {Louis Bavoil and Steve Callahan and Patricia Crossno and
Juliana Freire and Carlos Scheidegger and Cl\'audio Silva and Huy Vo},
title = {{*}{Vis{T}rails: Enabling Interactive Multiple-View
Visualizations}},
booktitle = {Proceedings of IEEE Visualization},
pages = {135-142},
year = 2005
}
@InProceedings{Baptista:2003:EOF,
author = {Ant\'onio Baptista and Todd Leen and Y. Zhang and A. Chawla
and David Maier and Wu-Chi Feng and Wu-Chang Feng and
Jon Walpole and Cl\'audio Silva and Juliana Freire},
title = {Environmental Observation and Forecasting Systems:
Vision, Challenges and Successes of a Prototype},
booktitle = {Conference on Systems Science and Information
Technology for Environmental Applications
(ISEIS 2003)},
year = 2003
}
@InProceedings{anderson@ieeene2007,
author = {Erik W. Anderson and Gil A. Preston and Cl\'audio T. Silva},
title = {Towards Development of a Circuit Based Treatment for Impaired Memory: A Multidisciplinary Approach},
OPTcrossref = {},
OPTkey = {},
booktitle = {IEEE EMBS Neural Engineering},
OPTpages = {},
year = {2007},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
OPTnote = {},
OPTannote = {}
}
@Misc{vistrails,
key = {vistrails},
title = {{VisTrails}},
howpublished = {http://www.vistrails.org},
}
@Misc{crowdlabs,
key = {crowdlabs},
title = {{CrowdLabs}},
howpublished = {http://www.crowdlabs.org},
}
%% VisTrails related and collaborations %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
@Misc{cdat-newsletter,
key = {cdat},
title = {CDAT Newsletter: CDAT v5.0 - Highlights},
month = {June},
year = {2007},
howpublished = {http://www-pcmdi.llnl.gov/software-portal/Newsletter/Vol3/news.html},
OPTnote = {},
OPTanote = {This big release will bring several new exciting features to the CDAT community. We expect to have the 'Beta' version ready for release in October 2007. We will be releasing CDAT v4.3 in August with a small subset of features listed below.},
}
%% WebDB publications %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
@proceedings{www2010-proceedings,
editor = {Michael Rappa and
Paul Jones and
Juliana Freire and
Soumen Chakrabarti},
title = {Proceedings of the 19th International Conference on World
Wide Web, WWW 2010, Raleigh, North Carolina, USA, April
26-30, 2010},
booktitle = {WWW},
publisher = {ACM},
year = {2010},
isbn = {978-1-60558-799-8},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
@proceedings{webdb2003,
editor = {Vassilis Christophides and
\freiremarkref{\meabbrev}},
title = {International Workshop on Web and Databases},
booktitle = {WebDB},
year = {2003},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{mergen@edbt2010,
author = {Sergio Luis Sardi Mergen and
Juliana Freire and
Carlos A. Heuser},
title = {Indexing relations on the web},
booktitle = {EDBT},
year = {2010},
pages = {430-440},
OPTee = {http://doi.acm.org/10.1145/1739041.1739094},
OPTcrossref = {DBLP:conf/edbt/2010},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{vieira@wwwj2009,
author = {Vieira, Karane and Costa Carvalho, Andr\'{e} Luiz and Berlt, Klessius and Moura, Edleno S. and Silva, Altigran S. and Freire, Juliana},
title = {On Finding Templates on Web Collections},
journal = {World Wide Web},
volume = {12},
number = {2},
year = {2009},
issn = {1386-145X},
pages = {171--211},
OPTdoi = {http://dx.doi.org/10.1007/s11280-009-0059-3},
OPTpublisher = {Kluwer Academic Publishers},
OPTaddress = {Hingham, MA, USA},
}
@InProceedings{mergen@sbbd2008,
author = {Sergio Mergen and Carlos Heuser and Juliana Freire},
title = {A Search Engine for Querying Structured Information Sources on the Web},
OPTcrossref = {},
OPTkey = {},
booktitle = sbbd,
OPTpages = {},
year = {2008},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = {},
OPTorganization = {},
OPTpublisher = {},
OPTannote = {}
}
@inproceedings{mergen@red2008,
author = {Sergio L. S. Mergen and
Juliana Freire and
Carlos A. Heuser},
title = {Querying structured information sources on the web},
booktitle = {iiWAS},
year = {2008},
pages = {470-476},
OPTee = {http://doi.acm.org/10.1145/1497308.1497394},
OPTcrossref = {DBLP:conf/iiwas/2008},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@article{nguyen@vldb2008,
author = {Hoa Nguyen and
Thanh Nguyen and
Juliana Freire},
title = {Learning to Extract Form Labels},
journal = {PVLDB},
volume = {1},
number = {1},
year = {2008},
pages = {684-694}
}
@inproceedings{nguyen@icde2008,
author = {Hoa Nguyen and
Eun Yong Kang and
Juliana Freire},
title = {Automatically Extracting Form Labels},
booktitle = {ICDE},
year = {2008},
pages = {1498-1500}
}
@inproceedings{vieira@cikm2008,
author = {Karane Vieira and
Luciano Barbosa and
Juliana Freire and
Altigran Soares da Silva},
title = {Siphon++: a hidden-web crawler for keyword-based interfaces},
booktitle = {CIKM},
year = {2008},
pages = {1361-1362}
}
@inproceedings{barbosa-class@www2007,
author = {Luciano Barbosa and Juliana Freire},
title = {Combining classifiers to identify online databases},
OPTbooktitle = {Proceedings of the International conference on World Wide Web},
booktitle = www,
year = {2007},
OPTisbn = {978-1-59593-654-7},
pages = {431-440},
OPTlocation = {Banff, Alberta, Canada},
OPTdoi = {http://doi.acm.org/10.1145/1242572.1242631},
OPTpublisher = {ACM Press},
OPTaddress = {New York, NY, USA},
}
@inproceedings{barbosa-crawler@www2007,
author = {Luciano Barbosa and Juliana Freire},
title = {An adaptive crawler for locating hiddenwebentry points},
booktitle = www,
OPTbooktitle = {WWW '07: Proceedings of the 16th international conference on World Wide Web},
year = {2007},
OPTisbn = {978-1-59593-654-7},
pages = {441-450},
OPTlocation = {Banff, Alberta, Canada},
OPTdoi = {http://doi.acm.org/10.1145/1242572.1242632},
OPTpublisher = {ACM Press},
OPTaddress = {New York, NY, USA},
}
@inproceedings{barbosa@icde2007,
author = {Luciano Barbosa and
Juliana Freire and
Altigran Soares da Silva},
title = {Organizing Hidden-Web Databases by Clustering Visible Web
Documents.},
booktitle = icde,
year = {2007},
pages = {326-335},
OPTee = {http://dx.doi.org/10.1109/ICDE.2007.367878},
OPTcrossref = {DBLP:conf/icde/2007},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@inproceedings{barbosa@dils2007,
author = {Luciano Barbosa and
Sumit Tandon and
Juliana Freire},
title = {Automatically Constructing a Directory of Molecular Biology
Databases},
booktitle = {DILS},
year = {2007},
pages = {6-16},
OPTee = {http://dx.doi.org/10.1007/978-3-540-73255-6_3},
OPTcrossref = {DBLP:conf/dils/2007},
OPTbibsource = {DBLP, http://dblp.uni-trier.de}
}
@InProceedings{vieira@cikm2006,
author = { Karane Vieira and Altigran Silva and N. Pinto and E.S. Moura and J. Cavalcanti and Juliana Freire},
title = {A Fast and Robust Method for Web Page Template Detection and Removal},
booktitle = {Proceedings of CIKM},
year = {2006},
OPTpages = {796-797}
}
@InProceedings{barbosa@cikm2006,
author = { Luciano Barbosa and Juliana Freire},
title = {Automatically Constructing Collections of Online
Databases (Poster)},
booktitle = {Proceedings of CIKM},
year = {2006},
pages = {796-797}
}
@InProceedings{barbosa@webdb2005,
author = {Luciano Barbosa and Juliana Freire},
title = {{Searching for Hidden-Web Databases}},
booktitle = {Proceedings of WebDB},
pages = {1-6},
year = {2005},
OPTnote = {}
}
@InProceedings{barbosa@widm2005,
author = {Luciano Barbosa and Ana Carolina Salgado and Francisco de
Carvalho and Jacques Robin and Juliana Freire},
title = {Looking at both the Present and the Past to
Efficiently Update Replicas of Web Content},
booktitle = {Proceedings of ACM WIDM},
pages = {1-6},
year = {2005},
OPTnote = {}
}
@InProceedings{barbosa@sbbd2004,
author = {Luciano Barbosa and Juliana Freire},
title = {Siphoning Hidden-Web Data through Keyword-Based Interfaces},
booktitle = {Proceedings of the Brazilian Symposium on Databases (SBBD)},
pages = {309-321},
year = {2004}
}
%% Old publications %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
@InProceedings{shrex@widm2004,
author = {Sihem Amer-Yahia and Fang Du and Juliana Freire},
title = {{A Comprehensive Solution to the XML-to-Relational
Mapping Problem}},
pages = {31-38},
booktitle = {Proceedings of ACM WIDM},
year = 2004,
OPTnote = {appears as 2 entries 10+4}
}
@InProceedings{sauna@dasfaa2004,
author = {Abhijit Kadlag and Amol V. Wanjari and Juliana
Freire and Jayant R. Haritsa},
title = {Supporting Exploratory Queries in Databases},
booktitle = {Proceedings of DASFAA},
pages = {594-605},
year = 2004
}
@InProceedings{freire@mobilesearch2002,
author = {Juliana Freire},
title = {Using Wrappers for Device Independent Web Access:
Opportunities, Challenges and Limitations (Extended
Abstract)},
booktitle = {Proc. of the WWW Workshop on Mobile Search},
OPTpages = {},
year = {2002},
note = {Invited paper},
OPTannote = {}
}
@inproceedings(webvcr@www9,
author = "V. Anupam and Juliana Freire and B. Kumar and
D. Lieuwen",
title = "Automating {Web} Navigation with the {WebVCR}",
pages = "503-517",
booktitle = {Proceedings of WWW},
year = 2000,
OPTnote = {40 citations}
)
@InProceedings{freire@sigmod99,
author = { H. Davulcu and Juliana Freire and M. Kifer and I.V. Ramakrishnan},
title = {A Layered Architecture for Querying Dynamic Web Content},
booktitle = {Proceedings of ACM SIGMOD},
year = {1999},
pages = {491-502},
OPTnote = {55 citations},
OPTannote = {}
}
@InProceedings{Freire:2000:WSA,
author = { Juliana Freire and Bharat Kumar},
title = {Web Services and Information Delivery for Diverse
Environments},
booktitle = {Proceedings VLDB Workshop on Technologies for E-Services},
year = 2000
}
@inproceedings{webviews@www2001,
author = " Juliana Freire and Bharat Kumar and Daniel
F. Lieuwen",
title = "WebViews: accessing personalized web content and
services",
booktitle = {Proceedings of WWW},
pages = "576-586",
year = 2001,
note = {Best paper runner-up at WWW10},
OPTnote = {42 citations}
}
@InProceedings{anupam@dexa1999,
author = { Vinod
Anupam and Yuri Breitbart and Juliana Freire and Bharat Kumar},
title = {Personalizing the Web Using Site Descriptions},
OPTcrossref = {},
OPTkey = {},
booktitle = {Proceedings of DEXA
International Workshop on Database \& Expert Systems Applications},
pages = {732-738},
year = {1999},
OPTnote = {12 citations},
}
@Book{Larson:1996:Syntactica,
author = { Richard Larson and David S. Warren and Juliana Freire and Kostis Sagonas},
title = {Syntactica},
publisher = {MIT Press},
year = 1996
}
@Book{Larson:1997:Semantica,
author = { Richard Larson and David S. Warren and Juliana Freire and Patricia Gomez and Kostis Sagonas},
title = {Semantica},
publisher = {MIT Press},
year = 1997
}
@inproceedings{legodb@icde2002,
author = { Philip Bohannon and Juliana Freire and Prasan Roy and J\'er\^ome Sim\'eon},
title = {From {XML} Schema to Relations: A Cost-Based Approach to {XML} Storage},
booktitle = {IEEE International Conference on Data Engineering (ICDE)},
OPTpublisher = {IEEE Computer Society},
year = {2002},
pages = {64-75},
}
@inproceedings{statix@sigmod2002,
author = { Juliana Freire and Jayant Haritsa and Maya Ramanath and Prasan Roy and J\'er\^ome Sim\'eon},
title = {StatiX: Making {XML} Count},
booktitle = {Proceedings of ACM SIGMOD},
OPTpublisher = {ACM},
year = {2002},
pages = {181-191},
}
@inproceedings{statix@icde2004,
author = { Juliana Freire and M. Ramanath and L. Zhang},
title = {A Flexible Infrastructure for Gathering {XML} Statistics and
Estimating Query Cardinality},
booktitle = {IEEE International Conference on Data Engineering (ICDE)},
year = {2004},
OPTpages = {181-191},
}
@inproceedings{shrex@vldb2004,
author = { Fang Du and Sihem Amer-Yahia and Juliana Freire},
title = { ShreX: Managing XML Documents in Relational Databases},
booktitle = {Proceedings of VLDB},
year = {2004},
pages = {1297-1300}
}
@inproceedings{imax@icde2005,
author = {Maya Ramanath and Lingzhi Zhang and Juliana Freire and Jayant Haritsa},
title = {IMAX: Incremental Maintenance of Schema-based XML Statistics},
booktitle = {IEEE International Conference on Data Engineering (ICDE)},
year = {2005},
pages = {273-284}
}
@inproceedings{flexmap@xsym2003,
author = {Maya Ramanath and Juliana Freire and Jayant Haritsa and Prasan Roy},
title = {Searching for Efficient XML-to-Relational Mappings},
booktitle = {Proceedings of XML Database Symposium (XSym)},
year = {2003},
pages = {19-36},
OPTnote = {10 citations}
}
@InProceedings{benedikt@sigmod2003,
author = {Michael Benedikt and Chee Yong Chan and Wenfei Fan and Juliana Freire and Rajeev Rastogi},
title = {Capturing both Types and Constraints in Data Integration},
booktitle = {Proceedings of ACM SIGMOD},
year = {2003},
pages = {277-288},
OPTannote = {26 citations}
}
@inproceedings{barbosa@vldb2005,
author = {Denilson Barbosa and Juliana Freire and Alberto Mendelzon},
title = {Designing Information-Preserving Mapping Schemes for XML},
booktitle = {Proceedings of the International Conference on Very Large Databases (VLDB)},
year = {2005},
pages = {109-120}
}
@inproceedings{barbosa@xsym2004,
author = {Denilson Barbosa and Juliana Freire and Alberto Mendelzon},
title = {Information Preservation in XML-to-Relational Mappings},
booktitle = {Proceedings of XML Database Symposium (XSym)},
year = {2004},
pages = {66-81}
}
@InProceedings{legodb@vldb2002,
author = { Philip Bohannon and Juliana Freire and Jayant Haritsa and Maya Ramanath and Prasan Roy and J\'er\^ome Sim\'eon},
title = {LegoDB: Customizing Relational Storage for XML Documents},
booktitle = {Proceedings of VLDB},
pages = {1091-1094},
year = 2002,
OPTnote = {24 citations},
}
@InProceedings{legodb@icde2003,
author = {Philip Bohannon and Juliana Freire and Jayant
Haritsa Maya Ramanath and Prasan Roy J\'er\^ome
Sim\'eon},
title = {Bridging the {XML}-Relational Divide with {LegoDB}:
A Demonstration},
booktitle = {IEEE International Conference on Data Engineering
(ICDE)},
year = 2003,
}
@InProceedings{legodb@eextt2002,
author = {Juliana Freire and J\'er\^ome Sim\'eon},
title = { Adaptive XML Shredding: Architecture,
Implementation, and Challenges},
booktitle = {Proceedings of EEXTT},
pages = {104-116},
year = 2002,
}
@inproceedings{veriweb@www2002,
author = {Michael Benedikt and Juliana Freire and Patrice Godefroid},
title = {VeriWeb: A Platform for Automating Web Site Testing},
OPTpages = {503-517},
booktitle = {Proceedings of WWW},
year = {2002},
OPTnote = {appears as 3 entries 28+4+1}
}
@inproceedings{byers@www2001,
author = {Simon Byers and Juliana Freire and Cl\'audio T.~Silva},
title = {Efficient Acquisition of Web Data through Restricted
Query Interfaces},
pages = {184-185},
booktitle = {Proceedings of WWW},
year = {2001},
}
@InProceedings{sihem@icde03,
author = {Sihem Amer-Yahia and Yannis Kotidis and Divesh Srivastava},
title = {{XML} Publishing: Look at Siblings too!},
booktitle = {IEEE International Conference on Data Engineering (ICDE)},
OPTpages = {},
year = 2003,
note = {Poster paper}
}
@Article{freire@cise2004,
author = { Juliana Freire and Michael Benedikt},
title = {Managing XML Data: An Abridged Overview},
journal = {IEEE Computing in Science \& Engineering},
year = {2004},
OPTkey = {},
volume = {6},
number = {4},
pages = {12-19},
OPTmonth = {},
OPTnote = {},
OPTannote = {}
}
@Article{freire@is2002,
author = {Juliana Freire and Daniel Lieuwen and Joann Ordille},
title = {Integrating Network Devices in a Meta-Directory:
The MetaComm Experience},
journal = {Information Systems},
year = {2002},
volume = {27},
number = {3},
pages = {193-217}}
@InProceedings{arlein@dbtel1999,
author = { Robert Arlein and Juliana Freire and Narain Gehani and
Daniel Lieuwen and Joann Ordille},
title = {Making LDAP Active with the LTAP Gateway: Case Study
in Providing Telecom Integration and Enhanced
Services},
booktitle = { Proceedings of the Very Large Databases Conference
(VLDB) Workshop on Databases in Telecommunication},
pages = {54-73},
year = {1999}
}
@InProceedings{Rao:1997:XSB,
author = {Prasad Rao and Konstantinos Sagonas and Terrance
Swift and David Warren and Juliana Freire},
title = {{XSB - A System for Efficiently Computing Well
Founded Semantics}},
booktitle = {Proceedings of the International Conference on Logic Programming and Non-Monotonic Reasoning (LPNMR)},
OPTnotes = {79 citations -- appears as 3 entries 46+27+6}
}
@InProceedings{freire@iclp1997,
author = {Juliana Freire and Terrance Swift and David Warren},
title = {Taking I/O Seriously: Resolution Reconsidered for
Disk},
booktitle = {International Conference on Logic Programming (ICLP)},
pages = {198-212},
year = {1997}
}
@InProceedings{freire@plilp1996,
author = {Juliana Freire and Terrance Swift and David Warren},
title = {Beyond Depth-First: Improving Tabled
Logic Programs through Alternative Scheduling Strategies},
booktitle = {Proceedings of the Eighth International
Symposium on Programming Languages, Implementations, Logics and
Programs (PLILP)},
pages = {243-258},
year = {1996}
}
@InProceedings{freire@plilp1995,
author = {Juliana Freire and Ruy Hu and Terrance Swift and David Warren},
title = {Exploiting Parallelism in Tabled Evaluations},
booktitle = {Proceedings of the Seventh International
Symposium on Programming Languages, Implementations, Logics and
Programs (PLILP)},
pages = {115-132},
year = {1995},
OPTnotes = {18 citations},
}
%% Juliana's grants %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
@Misc{vistrails@nsf2014,
OPTkey = {},
author = {Juliana Freire and David Koop},
title = {CI-EN: Enhancing and Supporting a Community-Based Data Analysis, Visualization, and Provenance Platform},
OPThowpublished = {},
month = sept,
year = 2014,
OPTnote = {Proposal submitted to the NSF CISE Research Infrastructure
Program.},
note = {NSF CISE-IIS award \#1405927},
OPTannote = {}
}
@Misc{seed@poly2013,
OPTkey = {},
author = {Juliana Freire and Vicki Been and Ingrid Gould Ellen},
title = {Improving the Study of Urban Policy through Visualization: A Study of Real-Estate Ownership in Urban Neighborhoods},
OPThowpublished = {},
OPTmonth = jul,
year = 2013,
note = {NYU Poly Provost Seed Grant},
OPTannote = {}
}
@Misc{mri@nsf2012,
OPTkey = {},
author = {Cl\'audio Silva and Torsten Suel and John Iacono and Juliana Freire and Huy Vo},
title = {MRI: Acquisition of an Infrastructure for Prototyping Next-Generation Algorithms for Large-Scale Visualization, Data Processing and Analysis},
OPThowpublished = {},
OPTmonth = jul,
year = 2012,
note = {NSF CNS award \# 1229185},
OPTannote = {}
}
@Misc{reproducibility@nsf2010,
OPTkey = {},
author = {Juliana Freire and Dennis Shasha},
title = {III: EAGER: Collaborative Research: A Community Experiment Platform for Reproducibility and Generalizability},
OPThowpublished = {},
OPTmonth = jul,
year = 2010,
note = {NSF CISE-IIS award \#1050422},
OPTannote = {}
}
@Misc{clue@nsf2009,
OPTkey = {},
author = {Bill Howe and Cl\'audio Silva and \freiremarkref{\meabbrev}},
title = {Where the Ocean Meets the Cloud: Ad Hoc Longitudinal
Analysis and Collaboration Over Massive Mesh Data},
OPThowpublished = {},
OPTmonth = jul,
year = 2009,
note = {NSF CISE-IIS award \#0844546},
OPTannote = {}
}
@Misc{provenance-analytics@nsf2009,
OPTkey = {},
author = {Juliana Freire and Cl\'audio Silva},
title = {III: Medium: Provenance Analytics: Exploring Computational Tasks and their History},
OPThowpublished = {},
OPTmonth = jul,
year = 2009,
note = {NSF CISE-IIS award \#0905385},
OPTannote = {}
}
@Misc{career@nsf2008,
OPTkey = {},
author = {Juliana Freire},
title = {CAREER: Storing, Querying and Re-Using Provenance of
Computational Tasks},
OPThowpublished = {},
OPTmonth = feb,
year = 2008,
note = {Award IIS \#0746500},
OPTannote = {}
}
@Misc{web@nsf2007,
OPTkey = {},
author = {Juliana Freire},
title = {III-COR: Discovering and Organizing Hidden-Web Sources},
OPThowpublished = {},
OPTmonth = feb,
year = 2007,
note = {Award IIS \#0713637},
OPTannote = {}
}
@Misc{cri@nsf2008,
OPTkey = {},
author = {C. Silva and Juliana Freire and Michael Kirby and Sarang Joshi},
title = {CRI:IAD: A Service-Oriented Architecture for The Computation, Visualization, and Management of Scientific Data},
OPThowpublished = {},
OPTmonth = feb,
year = 2008,
note = {Award CNS \#0751152},
OPTannote = {}
}
@Misc{xml@nsf2006,
OPTkey = {},
author = {\freiremarkref{\meabbrev}},
title = {XML Data Management: Taking Order and Updates into Account},
OPThowpublished = {},
OPTmonth = feb,
year = 2006,
note = {Award IIS \#0534628},
OPTannote = {}
}
@Misc{cmop@nsf2006,
OPTkey = {},
author = {Ant\'onio Baptista},
title = {Science and Technology Center for Coastal Margin Observation and Prediction },
OPThowpublished = {},
OPTmonth = feb,
year = 2006,
note = {Award OCE \#0424602},
OPTannote = {}
}
@Misc{workbench@nsf2005,
OPTkey = {},
author = {J. Lepreau and \freiremarkref{\meabbrev}},
title = {CT-T: A Laboratory Workbench for Security Research},
OPThowpublished = {},
OPTmonth = feb,
year = 2005,
note = {Award CNS \#0524096},
OPTannote = {}
}
@Misc{vistrails@nsf2005,
OPTkey = {},
author = {Juliana Freire and Cl\'audio Silva},
title = {Managing Complex Visualizations},
OPThowpublished = {},
month = jul,
year = 2005,
OPTnote = {Proposal submitted to the NSF CISE Research Infrastructure
Program.},
note = {NSF CISE-IIS award \#0513692},
OPTannote = {}
}
@Misc{cluster@nsf2003,
OPTkey = {},
author = {\freiremarkref{\meabbrev} and Cl\'audio Silva},
title = { A Cluster Infrastructure to Support Retrieval, Management
and Visualization of Massive Amounts of Data},
OPThowpublished = {},
month = feb,
year = 2003,
OPTnote = {Proposal submitted to the NSF CISE Research Infrastructure
Program.},
note = {NSF CISE-RI-MII \emph{0323604}},
OPTannote = {}
}
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