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Author SHA1 Message Date
Tathagata Das 06d5b173b6
[SPARK-26629][SS] Fixed error with multiple file stream in a query + restart on a batch that has no data for one file stream
## What changes were proposed in this pull request?
When a streaming query has multiple file streams, and there is a batch where one of the file streams dont have data in that batch, then if the query has to restart from that, it will throw the following error.
```
java.lang.IllegalStateException: batch 1 doesn't exist
	at org.apache.spark.sql.execution.streaming.HDFSMetadataLog$.verifyBatchIds(HDFSMetadataLog.scala:300)
	at org.apache.spark.sql.execution.streaming.FileStreamSourceLog.get(FileStreamSourceLog.scala:120)
	at org.apache.spark.sql.execution.streaming.FileStreamSource.getBatch(FileStreamSource.scala:181)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$org$apache$spark$sql$execution$streaming$MicroBatchExecution$$populateStartOffsets$2.apply(MicroBatchExecution.scala:294)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$org$apache$spark$sql$execution$streaming$MicroBatchExecution$$populateStartOffsets$2.apply(MicroBatchExecution.scala:291)
	at scala.collection.Iterator$class.foreach(Iterator.scala:891)
	at scala.collection.AbstractIterator.foreach(Iterator.scala:1334)
	at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
	at org.apache.spark.sql.execution.streaming.StreamProgress.foreach(StreamProgress.scala:25)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution.org$apache$spark$sql$execution$streaming$MicroBatchExecution$$populateStartOffsets(MicroBatchExecution.scala:291)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$runActivatedStream$1$$anonfun$apply$mcZ$sp$1.apply$mcV$sp(MicroBatchExecution.scala:178)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$runActivatedStream$1$$anonfun$apply$mcZ$sp$1.apply(MicroBatchExecution.scala:175)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$runActivatedStream$1$$anonfun$apply$mcZ$sp$1.apply(MicroBatchExecution.scala:175)
	at org.apache.spark.sql.execution.streaming.ProgressReporter$class.reportTimeTaken(ProgressReporter.scala:251)
	at org.apache.spark.sql.execution.streaming.StreamExecution.reportTimeTaken(StreamExecution.scala:61)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$runActivatedStream$1.apply$mcZ$sp(MicroBatchExecution.scala:175)
	at org.apache.spark.sql.execution.streaming.ProcessingTimeExecutor.execute(TriggerExecutor.scala:56)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution.runActivatedStream(MicroBatchExecution.scala:169)
	at org.apache.spark.sql.execution.streaming.StreamExecution.org$apache$spark$sql$execution$streaming$StreamExecution$$runStream(StreamExecution.scala:295)
	at org.apache.spark.sql.execution.streaming.StreamExecution$$anon$1.run(StreamExecution.scala:205)
```

Existing `HDFSMetadata.verifyBatchIds` threw error whenever the `batchIds` list was empty. In the context of `FileStreamSource.getBatch` (where verify is called) and `FileStreamSourceLog` (subclass of `HDFSMetadata`), this is usually okay because, in a streaming query with one file stream, the `batchIds` can never be empty:
- A batch is planned only when the `FileStreamSourceLog` has seen new offset (that is, there are new data files).
- So `FileStreamSource.getBatch` will be called on X to Y where X will always be > Y. This calls internally`HDFSMetadata.verifyBatchIds (X+1, Y)` with X+1-Y ids.

For example.,`FileStreamSource.getBatch(4, 5)` will call `verify(batchIds = Seq(5), start = 5, end = 5)`. However, the invariant of X > Y is not true when there are two file stream sources, as a batch may be planned even when only one of the file streams has data. So one of the file stream may not have data, which can call `FileStreamSource.getBatch(X, X)` -> `verify(batchIds = Seq.empty, start = X+1, end = X)` -> failure.

Note that `FileStreamSource.getBatch(X, X)` gets called **only when restarting a query in a batch where a file source did not have data**. This is because in normal planning of batches, `MicroBatchExecution` avoids calling `FileStreamSource.getBatch(X, X)` when offset X has not changed. However, when restarting a stream at such a batch, `MicroBatchExecution.populateStartOffsets()` calls `FileStreamSource.getBatch(X, X)` (DataSource V1 hack to initialize the source with last known offsets) thus hitting this issue.

The minimum solution here is to skip verification when `FileStreamSource.getBatch(X, X)`.

## How was this patch tested?

(Please explain how this patch was tested. E.g. unit tests, integration tests, manual tests)
(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)

Please review http://spark.apache.org/contributing.html before opening a pull request.

Closes #23557 from tdas/SPARK-26629.

Authored-by: Tathagata Das <tathagata.das1565@gmail.com>
Signed-off-by: Shixiong Zhu <zsxwing@gmail.com>
2019-01-16 09:42:14 -08:00
Wenchen Fan 954ef96c49 [SPARK-25530][SQL] data source v2 API refactor (batch write)
## What changes were proposed in this pull request?

Adjust the batch write API to match the read API refactor after https://github.com/apache/spark/pull/23086

The doc with high-level ideas:
https://docs.google.com/document/d/1vI26UEuDpVuOjWw4WPoH2T6y8WAekwtI7qoowhOFnI4/edit?usp=sharing

Basically it renames `BatchWriteSupportProvider` to `SupportsBatchWrite`, and make it extend `Table`. Renames `WriteSupport` to `Write`. It also cleans up some code as batch API is completed.

This PR also removes the test from https://github.com/apache/spark/pull/22688 . Now data source must return a table for read/write.

A few notes about future changes:
1. We will create `SupportsStreamingWrite` later for streaming APIs
2. We will create `SupportsBatchReplaceWhere`, `SupportsBatchAppend`, etc. for the new end-user write APIs. I think streaming APIs would remain to use `OutputMode`, and new end-user write APIs will apply to batch only, at least in the near future.
3. We will remove `SaveMode` from data source API: https://issues.apache.org/jira/browse/SPARK-26356

## How was this patch tested?

existing tests

Closes #23208 from cloud-fan/refactor-batch.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-15 13:53:48 -08:00
Anton Okolnychyi b45ff02e77
[SPARK-26203][SQL][TEST] Benchmark performance of In and InSet expressions
## What changes were proposed in this pull request?

This PR contains benchmarks for `In` and `InSet` expressions. They cover literals of different data types and will help us to decide where to integrate the switch-based logic for bytes/shorts/ints.

As discussed in [PR-23171](https://github.com/apache/spark/pull/23171), one potential approach is to convert `In` to `InSet` if all elements are literals independently of data types and the number of elements. According to the results of this PR, we might want to keep the threshold for the number of elements. The if-else approach approach might be faster for some data types on a small number of elements (structs? arrays? small decimals?).

### byte / short / int / long

Unless the number of items is really big, `InSet` is slower than `In` because of autoboxing .

Interestingly, `In` scales worse on bytes/shorts than on ints/longs. For example, `InSet` starts to match the performance on around 50 bytes/shorts while this does not happen on the same number of ints/longs. This is a bit strange as shorts/bytes (e.g., `(byte) 1`, `(short) 2`) are represented as ints in the bytecode.

### float / double

Use cases on floats/doubles also suffer from autoboxing. Therefore, `In` outperforms `InSet` on 10 elements.

Similarly to shorts/bytes, `In` scales worse on floats/doubles than on ints/longs because the equality condition is more complicated (e.g., `java.lang.Float.isNaN(filter_valueArg_0) && java.lang.Float.isNaN(9.0F)) || filter_valueArg_0 == 9.0F`).

### decimal

The reason why we have separate benchmarks for small and large decimals is that Spark might use longs to represent decimals in some cases.

If this optimization happens, then `equals` will be nothing else as comparing longs. If this does not happen, Spark will create an instance of `scala.BigDecimal` and use it for comparisons. The latter is more expensive.

`Decimal$hashCode` will always use `scala.BigDecimal$hashCode` even if the number is small enough to fit into a long variable. As a consequence, we see that use cases on small decimals are faster with `In` as they are using long comparisons under the hood. Large decimal values are always faster with `InSet`.

### string

`UTF8String$equals` is not cheap. Therefore, `In` does not really outperform `InSet` as in previous use cases.

### timestamp / date

Under the hood, timestamp/date values will be represented as long/int values. So, `In` allows us to avoid autoboxing.

### array

Arrays are working as expected. `In` is faster on 5 elements while `InSet` is faster on 15 elements. The benchmarks are using `UnsafeArrayData`.

### struct

`InSet` is always faster than `In` for structs. These benchmarks use `GenericInternalRow`.

Closes #23291 from aokolnychyi/spark-26203.

Lead-authored-by: Anton Okolnychyi <aokolnychyi@apple.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-15 07:25:50 -07:00
Maxim Gekk 33b5039cd3 [SPARK-25935][SQL] Allow null rows for bad records from JSON/CSV parsers
## What changes were proposed in this pull request?

This PR reverts  #22938 per discussion in #23325

Closes #23325

Closes #23543 from MaxGekk/return-nulls-from-json-parser.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-15 13:02:55 +08:00
Maxim Gekk 115fecfd84 [SPARK-26456][SQL] Cast date/timestamp to string by Date/TimestampFormatter
## What changes were proposed in this pull request?

In the PR, I propose to switch on `TimestampFormatter`/`DateFormatter` in casting dates/timestamps to strings. The changes should make the date/timestamp casting consistent to JSON/CSV datasources and time-related functions like `to_date`, `to_unix_timestamp`/`from_unixtime`.

Local formatters are moved out from `DateTimeUtils` to where they are actually used. It allows to avoid re-creation of new formatter instance per-each call. Another reason is to have separate parser for `PartitioningUtils` because default parsing pattern cannot be used (expected optional section `[.S]`).

## How was this patch tested?

It was tested by `DateTimeUtilsSuite`, `CastSuite` and `JDBC*Suite`.

Closes #23391 from MaxGekk/thread-local-date-format.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-14 21:59:25 +08:00
maryannxue 985f966b9c [SPARK-26065][FOLLOW-UP][SQL] Revert hint behavior in join reordering
## What changes were proposed in this pull request?

This is to fix a bug in #23036 that would cause a join hint to be applied on node it is not supposed to after join reordering. For example,
```
  val join = df.join(df, "id")
  val broadcasted = join.hint("broadcast")
  val join2 = join.join(broadcasted, "id").join(broadcasted, "id")
```
There should only be 2 broadcast hints on `join2`, but after join reordering there would be 4. It is because the hint application in join reordering compares the attribute set for testing relation equivalency.
Moreover, it could still be problematic even if the child relations were used in testing relation equivalency, due to the potential exprId conflict in nested self-join.

As a result, this PR simply reverts the join reorder hint behavior change introduced in #23036, which means if a join hint is present, the join node itself will not participate in the join reordering, while the sub-joins within its children still can.

## How was this patch tested?

Added new tests

Closes #23524 from maryannxue/query-hint-followup-2.

Authored-by: maryannxue <maryannxue@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-13 15:30:45 -08:00
Bruce Robbins 09b05487b7 [SPARK-26450][SQL] Avoid rebuilding map of schema for every column in projection
## What changes were proposed in this pull request?

When creating some unsafe projections, Spark rebuilds the map of schema attributes once for each expression in the projection. Some file format readers create one unsafe projection per input file, others create one per task. ProjectExec also creates one unsafe projection per task. As a result, for wide queries on wide tables, Spark might build the map of schema attributes hundreds of thousands of times.

This PR changes two functions to reuse the same AttributeSeq instance when creating BoundReference objects for each expression in the projection. This avoids the repeated rebuilding of the map of schema attributes.

### Benchmarks

The time saved by this PR depends on size of the schema, size of the projection, number of input files (or number of file splits), number of tasks, and file format. I chose a couple of example cases.

In the following tests, I ran the query
```sql
select * from table where id1 = 1
```

Matching rows are about 0.2% of the table.

#### Orc table 6000 columns, 500K rows, 34 input files

baseline | pr | improvement
----|----|----
1.772306 min | 1.487267 min | 16.082943%

#### Orc table 6000 columns, 500K rows, *17* input files

baseline | pr | improvement
----|----|----
 1.656400 min | 1.423550 min | 14.057595%

#### Orc table 60 columns, 50M rows, 34 input files

baseline | pr | improvement
----|----|----
0.299878 min | 0.290339 min | 3.180926%

#### Parquet table 6000 columns, 500K rows, 34 input files

baseline | pr | improvement
----|----|----
1.478306 min | 1.373728 min | 7.074165%

Note: The parquet reader does not create an unsafe projection. However, the filter operation in the query causes the planner to add a ProjectExec, which does create an unsafe projection for each task. So these results have nothing to do with Parquet itself.

#### Parquet table 60 columns, 50M rows, 34 input files

baseline | pr | improvement
----|----|----
0.245006 min | 0.242200 min | 1.145099%

#### CSV table 6000 columns, 500K rows, 34 input files

baseline | pr | improvement
----|----|----
2.390117 min | 2.182778 min | 8.674844%

#### CSV table 60 columns, 50M rows, 34 input files

baseline | pr | improvement
----|----|----
1.520911 min | 1.510211 min | 0.703526%

## How was this patch tested?

SQL unit tests
Python core and SQL test

Closes #23392 from bersprockets/norebuild.

Authored-by: Bruce Robbins <bersprockets@gmail.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-13 23:54:19 +01:00
Kengo Seki 3bd77aa9f6 [SPARK-26564] Fix wrong assertions and error messages for parameter checking
## What changes were proposed in this pull request?

If users set equivalent values to spark.network.timeout and spark.executor.heartbeatInterval, they get the following message:

```
java.lang.IllegalArgumentException: requirement failed: The value of spark.network.timeout=120s must be no less than the value of spark.executor.heartbeatInterval=120s.
```

But it's misleading since it can be read as they could be equal. So this PR replaces "no less than" with "greater than". Also, it fixes similar inconsistencies found in MLlib and SQL components.

## How was this patch tested?

Ran Spark with equivalent values for them manually and confirmed that the revised message was displayed.

Closes #23488 from sekikn/SPARK-26564.

Authored-by: Kengo Seki <sekikn@apache.org>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-12 14:53:33 -06:00
Oleksii Shkarupin 5b37092311
[SPARK-26538][SQL] Set default precision and scale for elements of postgres numeric array
## What changes were proposed in this pull request?

When determining CatalystType for postgres columns with type `numeric[]` set the type of array element to `DecimalType(38, 18)` instead of `DecimalType(0,0)`.

## How was this patch tested?

Tested with modified `org.apache.spark.sql.jdbc.JDBCSuite`.
Ran the `PostgresIntegrationSuite` manually.

Closes #23456 from a-shkarupin/postgres_numeric_array.

Lead-authored-by: Oleksii Shkarupin <a.shkarupin@gmail.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-12 11:06:39 -08:00
Mukul Murthy ae382c94dd
[SPARK-26586][SS] Fix race condition that causes streams to run with unexpected confs
## What changes were proposed in this pull request?

Fix race condition where streams can have unexpected conf values.

New streaming queries should run with isolated SparkSessions so that they aren't affected by conf updates after they are started. In StreamExecution, the parent SparkSession is cloned and used to run each batch, but this cloning happens in a separate thread and may happen after DataStreamWriter.start() returns. If a stream is started and a conf key is set immediately after, the stream is likely to have the new value.

## How was this patch tested?

New unit test that fails prior to the production change and passes with it.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Closes #23513 from mukulmurthy/26586.

Authored-by: Mukul Murthy <mukul.murthy@gmail.com>
Signed-off-by: Shixiong Zhu <zsxwing@gmail.com>
2019-01-11 11:46:14 -08:00
Liang-Chi Hsieh 50ebf3a43b
[SPARK-26551][SQL] Fix schema pruning error when selecting one complex field and having is not null predicate on another one
## What changes were proposed in this pull request?

Schema pruning has errors when selecting one complex field and having is not null predicate on another one:

```scala
val query = sql("select * from contacts")
  .where("name.middle is not null")
  .select(
    "id",
    "name.first",
    "name.middle",
    "name.last"
  )
  .where("last = 'Jones'")
  .select(count("id"))
```

```
java.lang.IllegalArgumentException: middle does not exist. Available: last
[info]   at org.apache.spark.sql.types.StructType.$anonfun$fieldIndex$1(StructType.scala:303)
[info]   at scala.collection.immutable.Map$Map1.getOrElse(Map.scala:119)
[info]   at org.apache.spark.sql.types.StructType.fieldIndex(StructType.scala:302)
[info]   at org.apache.spark.sql.execution.ProjectionOverSchema.$anonfun$getProjection$6(ProjectionOverSchema.scala:58)
[info]   at scala.Option.map(Option.scala:163)
[info]   at org.apache.spark.sql.execution.ProjectionOverSchema.getProjection(ProjectionOverSchema.scala:56)
[info]   at org.apache.spark.sql.execution.ProjectionOverSchema.unapply(ProjectionOverSchema.scala:32)
[info]   at org.apache.spark.sql.execution.datasources.parquet.ParquetSchemaPruning$$anonfun$$nestedInanonfun$buildNewProjection$1$1.applyOrElse(Parque
tSchemaPruning.scala:153)
```

## How was this patch tested?

Added tests.

Closes #23474 from viirya/SPARK-26551.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: DB Tsai <d_tsai@apple.com>
2019-01-11 19:23:32 +00:00
Jungtaek Lim (HeartSaVioR) d9e4cf67c0 [SPARK-26482][CORE] Use ConfigEntry for hardcoded configs for ui categories
## What changes were proposed in this pull request?

The PR makes hardcoded configs below to use `ConfigEntry`.

* spark.ui
* spark.ssl
* spark.authenticate
* spark.master.rest
* spark.master.ui
* spark.metrics
* spark.admin
* spark.modify.acl

This patch doesn't change configs which are not relevant to SparkConf (e.g. system properties).

## How was this patch tested?

Existing tests.

Closes #23423 from HeartSaVioR/SPARK-26466.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-01-11 10:18:07 -08:00
Sean Owen 51a6ba0181 [SPARK-26503][CORE] Get rid of spark.sql.legacy.timeParser.enabled
## What changes were proposed in this pull request?

Per discussion in #23391 (comment) this proposes to just remove the old pre-Spark-3 time parsing behavior.

This is a rebase of https://github.com/apache/spark/pull/23411

## How was this patch tested?

Existing tests.

Closes #23495 from srowen/SPARK-26503.2.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-11 08:53:12 -06:00
Wenchen Fan 1f1d98c6fa [SPARK-26580][SQL] remove Scala 2.11 hack for Scala UDF
## What changes were proposed in this pull request?

In https://github.com/apache/spark/pull/22732 , we tried our best to keep the behavior of Scala UDF unchanged in Spark 2.4.

However, since Spark 3.0, Scala 2.12 is the default. The trick that was used to keep the behavior unchanged doesn't work with Scala 2.12.

This PR proposes to remove the Scala 2.11 hack, as it's not useful.

## How was this patch tested?

existing tests.

Closes #23498 from cloud-fan/udf.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-11 14:52:13 +08:00
Dongjoon Hyun 270916f8cd
[SPARK-26584][SQL] Remove spark.sql.orc.copyBatchToSpark internal conf
## What changes were proposed in this pull request?

This PR aims to remove internal ORC configuration to simplify the code path for Spark 3.0.0. This removes the configuration `spark.sql.orc.copyBatchToSpark` and related ORC codes including tests and benchmarks.

## How was this patch tested?

Pass the Jenkins with the reduced test coverage.

Closes #23503 from dongjoon-hyun/SPARK-26584.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-10 08:42:23 -08:00
Sean Owen 2f8a938805 [SPARK-26539][CORE] Remove spark.memory.useLegacyMode and StaticMemoryManager
## What changes were proposed in this pull request?

Remove spark.memory.useLegacyMode and StaticMemoryManager. Update tests that used the StaticMemoryManager to equivalent use of UnifiedMemoryManager.

## How was this patch tested?

Existing tests, with modifications to make them work with a different mem manager.

Closes #23457 from srowen/SPARK-26539.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-10 08:57:44 -06:00
Jamison Bennett 1a47233f99 [SPARK-26493][SQL] Allow multiple spark.sql.extensions
## What changes were proposed in this pull request?

Allow multiple spark.sql.extensions to be specified in the
configuration.

## How was this patch tested?

New tests are added.

Closes #23398 from jamisonbennett/SPARK-26493.

Authored-by: Jamison Bennett <jamison.bennett@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-10 10:23:03 +08:00
maryannxue 2d01bccbd4 [SPARK-26065][FOLLOW-UP][SQL] Fix the Failure when having two Consecutive Hints
## What changes were proposed in this pull request?

This is to fix a bug in https://github.com/apache/spark/pull/23036, which would lead to an exception in case of two consecutive hints.

## How was this patch tested?

Added a new test.

Closes #23501 from maryannxue/query-hint-followup.

Authored-by: maryannxue <maryannxue@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-09 14:31:26 -08:00
Wenchen Fan e853afb416 [SPARK-26448][SQL] retain the difference between 0.0 and -0.0
## What changes were proposed in this pull request?

In https://github.com/apache/spark/pull/23043 , we introduced a behavior change: Spark users are not able to distinguish 0.0 and -0.0 anymore.

This PR proposes an alternative fix to the original bug, to retain the difference between 0.0 and -0.0 inside Spark.

The idea is, we can rewrite the window partition key, join key and grouping key during logical phase, to normalize the special floating numbers. Thus only operators care about special floating numbers need to pay the perf overhead, and end users can distinguish -0.0.

## How was this patch tested?

existing test

Closes #23388 from cloud-fan/minor.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-09 13:50:32 -08:00
Peter Toth 49c062b2e0
[SPARK-25484][SQL][TEST] Refactor ExternalAppendOnlyUnsafeRowArrayBenchmark
## What changes were proposed in this pull request?

Refactor ExternalAppendOnlyUnsafeRowArrayBenchmark to use main method.

## How was this patch tested?

Manually tested and regenerated results.
Please note that `spark.memory.debugFill` setting has a huge impact on this benchmark. Since it is set to true by default when running the benchmark from SBT, we need to disable it:
```
SPARK_GENERATE_BENCHMARK_FILES=1 build/sbt ";project sql;set javaOptions in Test += \"-Dspark.memory.debugFill=false\";test:runMain org.apache.spark.sql.execution.ExternalAppendOnlyUnsafeRowArrayBenchmark"
```

Closes #22617 from peter-toth/SPARK-25484.

Lead-authored-by: Peter Toth <peter.toth@gmail.com>
Co-authored-by: Peter Toth <ptoth@hortonworks.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-09 09:54:21 -08:00
Gengliang Wang 311f32f37f [SPARK-26571][SQL] Update Hive Serde mapping with canonical name of Parquet and Orc FileFormat
## What changes were proposed in this pull request?

Currently Spark table maintains Hive catalog storage format, so that Hive client can read it.  In `HiveSerDe.scala`, Spark uses a mapping from its data source to HiveSerde. The mapping is old, we need to update with latest canonical name of Parquet and Orc FileFormat.

Otherwise the following queries will result in wrong Serde value in Hive table(default value `org.apache.hadoop.mapred.SequenceFileInputFormat`), and Hive client will fail to read the output table:
```
df.write.format("org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat").saveAsTable(..)
```

```
df.write.format("org.apache.spark.sql.execution.datasources.orc.OrcFileFormat").saveAsTable(..)
```

This minor PR is to fix the mapping.

## How was this patch tested?

Unit test.

Closes #23491 from gengliangwang/fixHiveSerdeMap.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-09 10:18:33 +08:00
Marcelo Vanzin 2783e4c45f [SPARK-24522][UI] Create filter to apply HTTP security checks consistently.
Currently there is code scattered in a bunch of places to do different
things related to HTTP security, such as access control, setting
security-related headers, and filtering out bad content. This makes it
really easy to miss these things when writing new UI code.

This change creates a new filter that does all of those things, and
makes sure that all servlet handlers that are attached to the UI get
the new filter and any user-defined filters consistently. The extent
of the actual features should be the same as before.

The new filter is added at the end of the filter chain, because authentication
is done by custom filters and thus needs to happen first. This means that
custom filters see unfiltered HTTP requests - which is actually the current
behavior anyway.

As a side-effect of some of the code refactoring, handlers added after
the initial set also get wrapped with a GzipHandler, which didn't happen
before.

Tested with added unit tests and in a history server with SPNEGO auth
configured.

Closes #23302 from vanzin/SPARK-24522.

Authored-by: Marcelo Vanzin <vanzin@cloudera.com>
Signed-off-by: Imran Rashid <irashid@cloudera.com>
2019-01-08 11:25:33 -06:00
“attilapiros” c101182b10 [SPARK-26002][SQL] Fix day of year calculation for Julian calendar days
## What changes were proposed in this pull request?

Fixing leap year calculations for date operators (year/month/dayOfYear) where the Julian calendars are used (before 1582-10-04). In a Julian calendar every years which are multiples of 4 are leap years (there is no extra exception for years multiples of 100).

## How was this patch tested?

With a unit test ("SPARK-26002: correct day of year calculations for Julian calendar years") which focuses to these corner cases.

Manually:

```
scala> sql("select year('1500-01-01')").show()

+------------------------------+
|year(CAST(1500-01-01 AS DATE))|
+------------------------------+
|                          1500|
+------------------------------+

scala> sql("select dayOfYear('1100-01-01')").show()

+-----------------------------------+
|dayofyear(CAST(1100-01-01 AS DATE))|
+-----------------------------------+
|                                  1|
+-----------------------------------+
```

Closes #23000 from attilapiros/julianOffByDays.

Authored-by: “attilapiros” <piros.attila.zsolt@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-09 01:24:47 +08:00
Wenchen Fan 72a572ffd6 [SPARK-26323][SQL] Scala UDF should still check input types even if some inputs are of type Any
## What changes were proposed in this pull request?

For Scala UDF, when checking input nullability, we will skip inputs with type `Any`, and only check the inputs that provide nullability info.

We should do the same for checking input types.

## How was this patch tested?

new tests

Closes #23275 from cloud-fan/udf.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-08 22:44:33 +08:00
Hyukjin Kwon 5102ccc4ab [SPARK-26339][SQL][FOLLOW-UP] Issue warning instead of throwing an exception for underscore files
## What changes were proposed in this pull request?

The PR https://github.com/apache/spark/pull/23446 happened to introduce a behaviour change - empty dataframes can't be read anymore from underscore files. It looks controversial to allow or disallow this case so this PR targets to fix to issue warning instead of throwing an exception to be more conservative.

**Before**

```scala
scala> spark.read.schema("a int").parquet("_tmp*").show()
org.apache.spark.sql.AnalysisException: All paths were ignored:
file:/.../_tmp
  file:/.../_tmp1;
  at org.apache.spark.sql.execution.datasources.DataSource.checkAndGlobPathIfNecessary(DataSource.scala:570)
  at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:360)
  at org.apache.spark.sql.DataFrameReader.loadV1Source(DataFrameReader.scala:231)
  at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:219)
  at org.apache.spark.sql.DataFrameReader.parquet(DataFrameReader.scala:651)
  at org.apache.spark.sql.DataFrameReader.parquet(DataFrameReader.scala:635)
  ... 49 elided

scala> spark.read.text("_tmp*").show()
org.apache.spark.sql.AnalysisException: All paths were ignored:
file:/.../_tmp
  file:/.../_tmp1;
  at org.apache.spark.sql.execution.datasources.DataSource.checkAndGlobPathIfNecessary(DataSource.scala:570)
  at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:360)
  at org.apache.spark.sql.DataFrameReader.loadV1Source(DataFrameReader.scala:231)
  at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:219)
  at org.apache.spark.sql.DataFrameReader.text(DataFrameReader.scala:723)
  at org.apache.spark.sql.DataFrameReader.text(DataFrameReader.scala:695)
  ... 49 elided
```

**After**

```scala
scala> spark.read.schema("a int").parquet("_tmp*").show()
19/01/07 15:14:43 WARN DataSource: All paths were ignored:
  file:/.../_tmp
  file:/.../_tmp1
+---+
|  a|
+---+
+---+

scala> spark.read.text("_tmp*").show()
19/01/07 15:14:51 WARN DataSource: All paths were ignored:
  file:/.../_tmp
  file:/.../_tmp1
+-----+
|value|
+-----+
+-----+
```

## How was this patch tested?

Manually tested as above.

Closes #23481 from HyukjinKwon/SPARK-26339.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-07 15:48:54 -08:00
Marco Gaido 1a641525e6 [SPARK-26491][CORE][TEST] Use ConfigEntry for hardcoded configs for test categories
## What changes were proposed in this pull request?

The PR makes hardcoded `spark.test` and `spark.testing` configs to use `ConfigEntry` and put them in the config package.

## How was this patch tested?

existing UTs

Closes #23413 from mgaido91/SPARK-26491.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-01-07 15:35:33 -08:00
maryannxue 98be8953c7 [SPARK-26065][SQL] Change query hint from a LogicalPlan to a field
## What changes were proposed in this pull request?

The existing query hint implementation relies on a logical plan node `ResolvedHint` to store query hints in logical plans, and on `Statistics` in physical plans. Since `ResolvedHint` is not really a logical operator and can break the pattern matching for existing and future optimization rules, it is a issue to the Optimizer as the old `AnalysisBarrier` was to the Analyzer.

Given the fact that all our query hints are either 1) a join hint, i.e., broadcast hint; or 2) a re-partition hint, which is indeed an operator, we only need to add a hint field on the Join plan and that will be a good enough solution for the current hint usage.

This PR is to let `Join` node have a hint for its left sub-tree and another hint for its right sub-tree and each hint is a merged result of all the effective hints specified in the corresponding sub-tree. The "effectiveness" of a hint, i.e., whether that hint should be propagated to the `Join` node, is currently consistent with the hint propagation rules originally implemented in the `Statistics` approach. Note that the `ResolvedHint` node still has to live through the analysis stage because of the `Dataset` interface, but it will be got rid of and moved to the `Join` node in the "pre-optimization" stage.

This PR also introduces a change in how hints work with join reordering. Before this PR, hints would stop join reordering. For example, in "a.join(b).join(c).hint("broadcast").join(d)", the broadcast hint would stop d from participating in the cost-based join reordering while still allowing reordering from under the hint node. After this PR, though, the broadcast hint will not interfere with join reordering at all, and after reordering if a relation associated with a hint stays unchanged or equivalent to the original relation, the hint will be retained, otherwise will be discarded. For example, the original plan is like "a.join(b).hint("broadcast").join(c).hint("broadcast").join(d)", thus the join order is "a JOIN b JOIN c JOIN d". So if after reordering the join order becomes "a JOIN b JOIN (c JOIN d)", the plan will be like "a.join(b).hint("broadcast").join(c.join(d))"; but if after reordering the join order becomes "a JOIN c JOIN b JOIN d", the plan will be like "a.join(c).join(b).hint("broadcast").join(d)".

## How was this patch tested?

Added new tests.

Closes #23036 from maryannxue/query-hint.

Authored-by: maryannxue <maryannxue@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-07 13:59:40 -08:00
ayudovin 868e02533d [SPARK-26383][CORE] NPE when use DataFrameReader.jdbc with wrong URL
### What changes were proposed in this pull request?
When passing wrong url to jdbc then It would throw IllegalArgumentException instead of NPE.
### How was this patch tested?
Adding test case to Existing tests in JDBCSuite

Closes #23464 from ayudovin/fixing-npe.

Authored-by: ayudovin <a.yudovin6695@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-07 08:58:33 -06:00
Dongjoon Hyun 61133cb8a6
[SPARK-26536][BUILD][FOLLOWUP][TEST-MAVEN] Make StreamingReadSupport public for maven testing
## What changes were proposed in this pull request?

`StreamingReadSupport` is designed to be a `package` interface. Mockito seems to complain during `Maven` testing. This doesn't fail in `sbt` and IntelliJ. For mock-testing purpose, this PR makes it `public` interface and adds explicit comments like `public interface ReadSupport`

```scala
EpochCoordinatorSuite:
*** RUN ABORTED ***
  java.lang.IllegalAccessError: tried to
access class org.apache.spark.sql.sources.v2.reader.streaming.StreamingReadSupport
from class org.apache.spark.sql.sources.v2.reader.streaming.ContinuousReadSupport$MockitoMock$58628338
  at org.apache.spark.sql.sources.v2.reader.streaming.ContinuousReadSupport$MockitoMock$58628338.<clinit>(Unknown Source)
  at sun.reflect.GeneratedSerializationConstructorAccessor632.newInstance(Unknown Source)
  at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
  at org.objenesis.instantiator.sun.SunReflectionFactoryInstantiator.newInstance(SunReflectionFactoryInstantiator.java:48)
  at org.objenesis.ObjenesisBase.newInstance(ObjenesisBase.java:73)
  at org.mockito.internal.creation.instance.ObjenesisInstantiator.newInstance(ObjenesisInstantiator.java:19)
  at org.mockito.internal.creation.bytebuddy.SubclassByteBuddyMockMaker.createMock(SubclassByteBuddyMockMaker.java:47)
  at org.mockito.internal.creation.bytebuddy.ByteBuddyMockMaker.createMock(ByteBuddyMockMaker.java:25)
  at org.mockito.internal.util.MockUtil.createMock(MockUtil.java:35)
  at org.mockito.internal.MockitoCore.mock(MockitoCore.java:69)
```

## How was this patch tested?

Pass the Jenkins with Maven build

Closes #23463 from dongjoon-hyun/SPARK-26536-2.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-06 21:00:10 -08:00
Maxim Gekk b305d71625
[SPARK-26547][SQL] Remove duplicate toHiveString from HiveUtils
## What changes were proposed in this pull request?

The `toHiveString()` and `toHiveStructString` methods were removed from `HiveUtils` because they have been already implemented in `HiveResult`. One related test was moved to `HiveResultSuite`.

## How was this patch tested?

By tests from `hive-thriftserver`.

Closes #23466 from MaxGekk/dedup-hive-result-string.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-06 17:36:06 -08:00
Hirobe Keiichi 9d8e9b394b [SPARK-26339][SQL] Throws better exception when reading files that start with underscore
## What changes were proposed in this pull request?
My pull request #23288 was resolved and merged to master, but it turned out  later that my change breaks another regression test. Because we cannot reopen pull request, I create a new pull request here.
Commit 92934b4 is only change after pull request #23288.
`CheckFileExist` was avoided at 239cfa4 after discussing #23288 (comment).
But, that change turned out to be wrong because we should not check if argument checkFileExist is false.

Test 27e42c1de5/sql/core/src/test/scala/org/apache/spark/sql/SQLQuerySuite.scala (L2555)
failed when we avoided checkFileExist, but now successed after commit 92934b4 .

## How was this patch tested?
Both of below tests were passed.
```
testOnly org.apache.spark.sql.execution.datasources.csv.CSVSuite
testOnly org.apache.spark.sql.SQLQuerySuite
```

Closes #23446 from KeiichiHirobe/SPARK-26339.

Authored-by: Hirobe Keiichi <keiichi_hirobe@forcia.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-06 08:52:09 -06:00
Dave DeCaprio a17851cb95 [SPARK-26548][SQL] Don't hold CacheManager write lock while computing executedPlan
## What changes were proposed in this pull request?

Address SPARK-26548, in Spark 2.4.0, the CacheManager holds a write lock while computing the executedPlan for a cached logicalPlan.  In some cases with very large query plans this can be an expensive operation, taking minutes to run.  The entire cache is blocked during this time.  This PR changes that so the writeLock is only obtained after the executedPlan is generated, this reduces the time the lock is held to just the necessary time when the shared data structure is being updated.

gatorsmile and cloud-fan - You can committed patches in this area before.  This is a small incremental change.

## How was this patch tested?

Has been tested on a live system where the blocking was causing major issues and it is working well.
 CacheManager has no explicit unit test but is used in many places internally as part of the SharedState.

Closes #23469 from DaveDeCaprio/optimizer-unblocked.

Lead-authored-by: Dave DeCaprio <daved@alum.mit.edu>
Co-authored-by: David DeCaprio <daved@alum.mit.edu>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-05 19:20:35 -08:00
Marco Gaido 1af1190bee
[SPARK-26078][SQL][FOLLOWUP] Remove useless import
## What changes were proposed in this pull request?

While backporting the patch to 2.4/2.3, I realized that the patch introduces unneeded imports (probably leftovers from intermediate changes). This PR removes the useless import.

## How was this patch tested?

NA

Closes #23451 from mgaido91/SPARK-26078_FOLLOWUP.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-05 01:14:58 -08:00
Dongjoon Hyun e15a319ccd
[SPARK-26536][BUILD][TEST] Upgrade Mockito to 2.23.4
## What changes were proposed in this pull request?

This PR upgrades Mockito from 1.10.19 to 2.23.4. The following changes are required.

- Replace `org.mockito.Matchers` with `org.mockito.ArgumentMatchers`
- Replace `anyObject` with `any`
- Replace `getArgumentAt` with `getArgument` and add type annotation.
- Use `isNull` matcher in case of `null` is invoked.
```scala
     saslHandler.channelInactive(null);
-    verify(handler).channelInactive(any(TransportClient.class));
+    verify(handler).channelInactive(isNull());
```

- Make and use `doReturn` wrapper to avoid [SI-4775](https://issues.scala-lang.org/browse/SI-4775)
```scala
private def doReturn(value: Any) = org.mockito.Mockito.doReturn(value, Seq.empty: _*)
```

## How was this patch tested?

Pass the Jenkins with the existing tests.

Closes #23452 from dongjoon-hyun/SPARK-26536.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-04 19:23:38 -08:00
Liu,Linhong f65dc9593e [SPARK-26526][SQL][TEST] Fix invalid test case about non-deterministic expression
## What changes were proposed in this pull request?

Test case in SPARK-10316 is used to make sure non-deterministic `Filter` won't be pushed through `Project`
But in current code base this test case can't cover this purpose.
Change LogicalRDD to HadoopFsRelation can fix this issue.

## How was this patch tested?

Modified test pass.

Closes #23440 from LinhongLiu/fix-test.

Authored-by: Liu,Linhong <liulinhong@baidu.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-04 10:51:33 +08:00
Gengliang Wang e2dbafdbc5 [SPARK-26447][SQL] Allow OrcColumnarBatchReader to return less partition columns
## What changes were proposed in this pull request?

Currently OrcColumnarBatchReader returns all the partition column values in the batch read.
In data source V2, we can improve it by returning the required partition column values only.

This PR is part of https://github.com/apache/spark/pull/23383 . As cloud-fan suggested, create a new PR to make review easier.

Also, this PR doesn't improve `OrcFileFormat`, since in the method `buildReaderWithPartitionValues`, the `requiredSchema` filter out all the partition columns, so we can't know which partition column is required.

## How was this patch tested?

Unit test

Closes #23387 from gengliangwang/refactorOrcColumnarBatch.

Lead-authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Co-authored-by: Gengliang Wang <ltnwgl@gmail.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-04 00:37:03 +08:00
Liang-Chi Hsieh 40711eef16 [SPARK-26517][SQL][TEST] Avoid duplicate test in ParquetSchemaPruningSuite
## What changes were proposed in this pull request?

`testExactCaseQueryPruning` and `testMixedCaseQueryPruning` don't need to set up `PARQUET_VECTORIZED_READER_ENABLED` config. Because `withMixedCaseData` will run against both Spark vectorized reader and Parquet-mr reader.

## How was this patch tested?

Existing test.

Closes #23427 from viirya/fix-parquet-schema-pruning-test.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-03 10:30:47 -06:00
Maxim Gekk 2a30deb85a [SPARK-26502][SQL] Move hiveResultString() from QueryExecution to HiveResult
## What changes were proposed in this pull request?

In the PR, I propose to move `hiveResultString()` out of `QueryExecution` and put it to a separate object.

Closes #23409 from MaxGekk/hive-result-string.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-03 11:27:40 +01:00
Hyukjin Kwon 56967b7e28 [SPARK-26403][SQL] Support pivoting using array column for pivot(column) API
## What changes were proposed in this pull request?

This PR fixes `pivot(Column)` can accepts `collection.mutable.WrappedArray`.

Note that we return `collection.mutable.WrappedArray` from `ArrayType`, and `Literal.apply` doesn't support this.

We can unwrap the array and use it for type dispatch.

```scala
val df = Seq(
  (2, Seq.empty[String]),
  (2, Seq("a", "x")),
  (3, Seq.empty[String]),
  (3, Seq("a", "x"))).toDF("x", "s")
df.groupBy("x").pivot("s").count().show()
```

Before:

```
Unsupported literal type class scala.collection.mutable.WrappedArray$ofRef WrappedArray()
java.lang.RuntimeException: Unsupported literal type class scala.collection.mutable.WrappedArray$ofRef WrappedArray()
	at org.apache.spark.sql.catalyst.expressions.Literal$.apply(literals.scala:80)
	at org.apache.spark.sql.RelationalGroupedDataset.$anonfun$pivot$2(RelationalGroupedDataset.scala:427)
	at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:237)
	at scala.collection.IndexedSeqOptimized.foreach(IndexedSeqOptimized.scala:36)
	at scala.collection.IndexedSeqOptimized.foreach$(IndexedSeqOptimized.scala:33)
	at scala.collection.mutable.WrappedArray.foreach(WrappedArray.scala:39)
	at scala.collection.TraversableLike.map(TraversableLike.scala:237)
	at scala.collection.TraversableLike.map$(TraversableLike.scala:230)
	at scala.collection.AbstractTraversable.map(Traversable.scala:108)
	at org.apache.spark.sql.RelationalGroupedDataset.pivot(RelationalGroupedDataset.scala:425)
	at org.apache.spark.sql.RelationalGroupedDataset.pivot(RelationalGroupedDataset.scala:406)
	at org.apache.spark.sql.RelationalGroupedDataset.pivot(RelationalGroupedDataset.scala:317)
	at org.apache.spark.sql.DataFramePivotSuite.$anonfun$new$1(DataFramePivotSuite.scala:341)
	at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
```

After:

```
+---+---+------+
|  x| []|[a, x]|
+---+---+------+
|  3|  1|     1|
|  2|  1|     1|
+---+---+------+
```

## How was this patch tested?

Manually tested and unittests were added.

Closes #23349 from HyukjinKwon/SPARK-26403.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-03 11:01:54 +08:00
Maxim Gekk 8be4d24a27 [SPARK-26023][SQL][FOLLOWUP] Dumping truncated plans and generated code to a file
## What changes were proposed in this pull request?

`DataSourceScanExec` overrides "wrong" `treeString` method without `append`. In the PR, I propose to make `treeString`s **final** to prevent such mistakes in the future. And removed the `treeString` and `verboseString` since they both use `simpleString` with reduction.

## How was this patch tested?

It was tested by `DataSourceScanExecRedactionSuite`

Closes #23431 from MaxGekk/datasource-scan-exec-followup.

Authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-02 16:57:10 -08:00
seancxmao d40654861b [SPARK-26277][SQL][TEST] WholeStageCodegen metrics should be tested with whole-stage codegen enabled
## What changes were proposed in this pull request?
In `org.apache.spark.sql.execution.metric.SQLMetricsSuite`, there's a test case named "WholeStageCodegen metrics". However, it is executed with whole-stage codegen disabled. This PR fixes this by enable whole-stage codegen for this test case.

## How was this patch tested?
Tested locally using exiting test cases.

Closes #23224 from seancxmao/codegen-metrics.

Authored-by: seancxmao <seancxmao@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-02 15:45:14 -06:00
Hyukjin Kwon 39a0493387 [SPARK-26227][R] from_[csv|json] should accept schema_of_[csv|json] in R API
## What changes were proposed in this pull request?

**1. Document `from_csv(..., schema_of_csv(...))` support:**

```R
csv <- "Amsterdam,2018"
df <- sql(paste0("SELECT '", csv, "' as csv"))
head(select(df, from_csv(df$csv, schema_of_csv(csv))))
```

```
    from_csv(csv)
1 Amsterdam, 2018
```

**2. Allow `from_json(..., schema_of_json(...))`**

Before:

```R
df2 <- sql("SELECT named_struct('name', 'Bob') as people")
df2 <- mutate(df2, people_json = to_json(df2$people))
head(select(df2, from_json(df2$people_json, schema_of_json(head(df2)$people_json))))
```

```
Error in (function (classes, fdef, mtable)  :
  unable to find an inherited method for function ‘from_json’ for signature ‘"Column", "Column"’
```

After:

```R
df2 <- sql("SELECT named_struct('name', 'Bob') as people")
df2 <- mutate(df2, people_json = to_json(df2$people))
head(select(df2, from_json(df2$people_json, schema_of_json(head(df2)$people_json))))
```

```
  from_json(people_json)
1                    Bob
```

**3. (While I'm here) Allow `structType` as schema for `from_csv` support to match with `from_json`.**

Before:

```R
csv <- "Amsterdam,2018"
df <- sql(paste0("SELECT '", csv, "' as csv"))
head(select(df, from_csv(df$csv, structType("city STRING, year INT"))))
```

```
Error in (function (classes, fdef, mtable)  :
  unable to find an inherited method for function ‘from_csv’ for signature ‘"Column", "structType"’
```

After:

```R
csv <- "Amsterdam,2018"
df <- sql(paste0("SELECT '", csv, "' as csv"))
head(select(df, from_csv(df$csv, structType("city STRING, year INT"))))
```

```
    from_csv(csv)
1 Amsterdam, 2018
```

## How was this patch tested?

Manually tested and unittests were added.

Closes #23184 from HyukjinKwon/SPARK-26227-1.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-02 08:01:34 +08:00
Thomas D'Silva 5f0ddd2d6e [SPARK-26499][SQL] JdbcUtils.makeGetter does not handle ByteType
…Type

## What changes were proposed in this pull request?
Modifed JdbcUtils.makeGetter to handle ByteType.

## How was this patch tested?

Added a new test to JDBCSuite that maps ```TINYINT``` to ```ByteType```.

Closes #23400 from twdsilva/tiny_int_support.

Authored-by: Thomas D'Silva <tdsilva@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-01 14:11:14 +08:00
Hyukjin Kwon f7455618ce Revert "[SPARK-26339][SQL] Throws better exception when reading files that start with underscore"
This reverts commit c0b9db120d.
2019-01-01 09:29:28 +08:00
Herman van Hovell c0368363f8 [SPARK-26495][SQL] Simplify the SelectedField extractor.
## What changes were proposed in this pull request?
The current `SelectedField` extractor is somewhat complicated and it seems to be handling cases that should be handled automatically:

- `GetArrayItem(child: GetStructFieldObject())`
- `GetArrayStructFields(child: GetArrayStructFields())`
- `GetMap(value: GetStructFieldObject())`

This PR removes those cases and simplifies the extractor by passing down the data type instead of a field.

## How was this patch tested?
Existing tests.

Closes #23397 from hvanhovell/SPARK-26495.

Authored-by: Herman van Hovell <hvanhovell@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2018-12-31 17:46:06 +01:00
Hirobe Keiichi c0b9db120d [SPARK-26339][SQL] Throws better exception when reading files that start with underscore
## What changes were proposed in this pull request?
As the description in SPARK-26339, spark.read behavior is very confusing when reading files that start with underscore,  fix this by throwing exception which message is "Path does not exist".

## How was this patch tested?
manual tests.
Both of codes below throws exception which message is "Path does not exist".
```
spark.read.csv("/home/forcia/work/spark/_test.csv")
spark.read.schema("test STRING, number INT").csv("/home/forcia/work/spark/_test.csv")
```

Closes #23288 from KeiichiHirobe/SPARK-26339.

Authored-by: Hirobe Keiichi <keiichi_hirobe@forcia.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2018-12-31 10:15:14 -06:00
Maxim Gekk 89c92ccc20 [SPARK-26504][SQL] Rope-wise dumping of Spark plans
## What changes were proposed in this pull request?

Proposed new class `StringConcat` for converting a sequence of strings to string with one memory allocation in the `toString` method.  `StringConcat` replaces `StringBuilderWriter` in methods of dumping of Spark plans and codegen to strings.

All `Writer` arguments are replaced by `String => Unit` in methods related to Spark plans stringification.

## How was this patch tested?

It was tested by existing suites `QueryExecutionSuite`, `DebuggingSuite` as well as new tests for `StringConcat` in `StringUtilsSuite`.

Closes #23406 from MaxGekk/rope-plan.

Authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2018-12-31 16:39:46 +01:00
seancxmao 0996b7c95a [SPARK-23375][SQL][FOLLOWUP][TEST] Test Sort metrics while Sort is missing
## What changes were proposed in this pull request?
#20560/[SPARK-23375](https://issues.apache.org/jira/browse/SPARK-23375) introduced an optimizer rule to eliminate redundant Sort. For a test case named "Sort metrics" in `SQLMetricsSuite`, because range is already sorted, sort is removed by the `RemoveRedundantSorts`, which makes this test case meaningless.

This PR modifies the query for testing Sort metrics and checks Sort exists in the plan.

## How was this patch tested?
Modify the existing test case.

Closes #23258 from seancxmao/sort-metrics.

Authored-by: seancxmao <seancxmao@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2018-12-31 08:24:18 -06:00
Hyukjin Kwon e63243df8a
[SPARK-26496][SS][TEST] Avoid to use Random.nextString in StreamingInnerJoinSuite
## What changes were proposed in this pull request?

Similar with https://github.com/apache/spark/pull/21446. Looks random string is not quite safe as a directory name.

```scala
scala> val prefix = Random.nextString(10); val dir = new File("/tmp", "del_" + prefix + "-" + UUID.randomUUID.toString); dir.mkdirs()
prefix: String = 窽텘⒘駖ⵚ駢⡞Ρ닋੎
dir: java.io.File = /tmp/del_窽텘⒘駖ⵚ駢⡞Ρ닋੎-a3f99855-c429-47a0-a108-47bca6905745
res40: Boolean = false  // nope, didn't like this one
```

## How was this patch tested?

Unit test was added, and manually.

Closes #23405 from HyukjinKwon/SPARK-26496.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-12-29 12:11:45 -08:00
Maxim Gekk a1c1dd3484 [SPARK-26191][SQL] Control truncation of Spark plans via maxFields parameter
## What changes were proposed in this pull request?

In the PR, I propose to add `maxFields` parameter to all functions involved in creation of textual representation of spark plans such as `simpleString` and `verboseString`. New parameter restricts number of fields converted to truncated strings. Any elements beyond the limit will be dropped and replaced by a `"... N more fields"` placeholder. The threshold is bumped up to `Int.MaxValue` for `toFile()`.

## How was this patch tested?

Added a test to `QueryExecutionSuite` which checks `maxFields` impacts on number of truncated fields in `LocalRelation`.

Closes #23159 from MaxGekk/to-file-max-fields.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2018-12-27 11:13:16 +01:00