Commit graph

242 commits

Author SHA1 Message Date
Reynold Xin 7d789e117d [SPARK-5612][SQL] Move DataFrame implicit functions into SQLContext.implicits.
Author: Reynold Xin <rxin@databricks.com>

Closes #4386 from rxin/df-implicits and squashes the following commits:

9d96606 [Reynold Xin] style fix
edd296b [Reynold Xin] ReplSuite
1c946ab [Reynold Xin] [SPARK-5612][SQL] Move DataFrame implicit functions into SQLContext.implicits.
2015-02-04 23:44:34 -08:00
Jacek Lewandowski cfea30037f Spark 3883: SSL support for HttpServer and Akka
SPARK-3883: SSL support for Akka connections and Jetty based file servers.

This story introduced the following changes:
- Introduced SSLOptions object which holds the SSL configuration and can build the appropriate configuration for Akka or Jetty. SSLOptions can be created by parsing SparkConf entries at a specified namespace.
- SSLOptions is created and kept by SecurityManager
- All Akka actor address creation snippets based on interpolated strings were replaced by a dedicated methods from AkkaUtils. Those methods select the proper Akka protocol - whether akka.tcp or akka.ssl.tcp
- Added tests cases for AkkaUtils, FileServer, SSLOptions and SecurityManager
- Added a way to use node local SSL configuration by executors and driver in standalone mode. It can be done by specifying spark.ssl.useNodeLocalConf in SparkConf.
- Made CoarseGrainedExecutorBackend not overwrite the settings which are executor startup configuration - they are passed anyway from Worker

Refer to https://github.com/apache/spark/pull/3571 for discussion and details

Author: Jacek Lewandowski <lewandowski.jacek@gmail.com>
Author: Jacek Lewandowski <jacek.lewandowski@datastax.com>

Closes #3571 from jacek-lewandowski/SPARK-3883-master and squashes the following commits:

9ef4ed1 [Jacek Lewandowski] Merge pull request #2 from jacek-lewandowski/SPARK-3883-docs2
fb31b49 [Jacek Lewandowski] SPARK-3883: Added SSL setup documentation
2532668 [Jacek Lewandowski] SPARK-3883: Refactored AkkaUtils.protocol method to not use Try
90a8762 [Jacek Lewandowski] SPARK-3883: Refactored methods to resolve Akka address and made it possible to easily configure multiple communication layers for SSL
72b2541 [Jacek Lewandowski] SPARK-3883: A reference to the fallback SSLOptions can be provided when constructing SSLOptions
93050f4 [Jacek Lewandowski] SPARK-3883: SSL support for HttpServer and Akka
2015-02-02 17:27:26 -08:00
Tobias Schlatter 9f0a6e1838 [SPARK-5353] Log failures in REPL class loading
Author: Tobias Schlatter <tobias@meisch.ch>

Closes #4130 from gzm0/log-repl-loading and squashes the following commits:

4fa0582 [Tobias Schlatter] Log failures in REPL class loading
2015-02-01 21:43:49 -08:00
Patrick Wendell a15f6e31fc [SPARK-3996]: Shade Jetty in Spark deliverables
(v2 of this patch with a fix that was only relevant for the maven build).

This patch piggy-back's on vanzin's work to simplify the Guava shading,
and adds Jetty as a shaded library in Spark. Other than adding Jetty,
it consilidates the <artifactSet>'s into the root pom. I found it was
a bit easier to follow that way, since you don't need to look into
child pom's to find out specific artifact sets included in shading.

Author: Patrick Wendell <patrick@databricks.com>

Closes #4285 from pwendell/jetty and squashes the following commits:

d3e7f4e [Patrick Wendell] Fix for shaded deps causing compile errors
19f0710 [Patrick Wendell] More code review feedback
961452d [Patrick Wendell] Responding to feedback from Marcello
6df25ca [Patrick Wendell] [WIP] [SPARK-3996]: Shade Jetty in Spark deliverables
2015-02-01 21:13:57 -08:00
Reynold Xin c8e934ef3c [SPARK-5447][SQL] Replaced reference to SchemaRDD with DataFrame.
and

[SPARK-5448][SQL] Make CacheManager a concrete class and field in SQLContext

Author: Reynold Xin <rxin@databricks.com>

Closes #4242 from rxin/sqlCleanup and squashes the following commits:

e351cb2 [Reynold Xin] Fixed toDataFrame.
6545c42 [Reynold Xin] More changes.
728c017 [Reynold Xin] [SPARK-5447][SQL] Replaced reference to SchemaRDD with DataFrame.
2015-01-28 12:10:01 -08:00
Patrick Wendell ad16da1bcc [HOTFIX]: Minor clean up regarding skipped artifacts in build files.
There are two relevant 'skip' configurations in the build, the first
is for "mvn install" and the second is for "mvn deploy". As of 1.2,
we actually use "mvn install" to generate our deployed artifcts,
because we have some customization of the nexus upload due to having
to cross compile for Scala 2.10 and 2.11.

There is no reason to have differents settings for these values,
this patch simply cleans this up for the repl/ and yarn/
projects.

Author: Patrick Wendell <patrick@databricks.com>

Closes #4080 from pwendell/master and squashes the following commits:

e21b78b [Patrick Wendell] [HOTFIX]: Minor clean up regarding skipped artifacts in build files.
2015-01-17 23:15:12 -08:00
Chip Senkbeil d05c9ee6e8 [SPARK-4923][REPL] Add Developer API to REPL to allow re-publishing the REPL jar
As requested in [SPARK-4923](https://issues.apache.org/jira/browse/SPARK-4923), I've provided a rough DeveloperApi for the repl. I've only done this for Scala 2.10 because it does not appear that Scala 2.11 is implemented. The Scala 2.11 repl still has the old `scala.tools.nsc` package and the SparkIMain does not appear to have the class server needed for shipping code over (unless this functionality has been moved elsewhere?). I also left alone the `ExecutorClassLoader` and `ConstructorCleaner` as I have no experience working with those classes.

This marks the majority of methods in `SparkIMain` as _private_ with a few special cases being _private[repl]_ as other classes within the same package access them. Any public method has been marked with `DeveloperApi` as suggested by pwendell and I took the liberty of writing up a Scaladoc for each one to further elaborate their usage.

As the Scala 2.11 REPL [conforms]((https://github.com/scala/scala/pull/2206)) to [JSR-223](http://docs.oracle.com/javase/8/docs/technotes/guides/scripting/), the [Spark Kernel](https://github.com/ibm-et/spark-kernel) uses the SparkIMain of Scala 2.10 in the same manner. So, I've taken care to expose methods predominately related to necessary functionality towards a JSR-223 scripting engine implementation.

1. The ability to _get_ variables from the interpreter (and other information like class/symbol/type)
2. The ability to _put_ variables into the interpreter
3. The ability to _compile_ code
4. The ability to _execute_ code
5. The ability to get contextual information regarding the scripting environment

Additional functionality that I marked as exposed included the following:

1. The blocking initialization method (needed to actually start SparkIMain instance)
2. The class server uri (needed to set the _spark.repl.class.uri_ property after initialization), reduced from the entire class server
3. The class output directory (beneficial for tools like ours that need to inspect and use the directory where class files are served)
4. Suppression (quiet/silence) mechanics for output
5. Ability to add a jar to the compile/runtime classpath
6. The reset/close functionality
7. Metric information (last variable assignment, "needed" for extracting results from last execution, real variable name for better debugging)
8. Execution wrapper (useful to have, but debatable)

Aside from `SparkIMain`, I updated other classes/traits and their methods in the _repl_ package to be private/package protected where possible. A few odd cases (like the SparkHelper being in the scala.tools.nsc package to expose a private variable) still exist, but I did my best at labelling them.

`SparkCommandLine` has proven useful to extract settings and `SparkJLineCompletion` has proven to be useful in implementing auto-completion in the [Spark Kernel](https://github.com/ibm-et/spark-kernel) project. Other than those - and `SparkIMain` - my experience has yielded that other classes/methods are not necessary for interactive applications taking advantage of the REPL API.

Tested via the following:

    $ export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=512M -XX:ReservedCodeCacheSize=512m"
    $ mvn -Phadoop-2.3 -DskipTests clean package && mvn -Phadoop-2.3 test

Also did a quick verification that I could start the shell and execute some code:

    $ ./bin/spark-shell
    ...

    scala> val x = 3
    x: Int = 3

    scala> sc.parallelize(1 to 10).reduce(_+_)
    ...
    res1: Int = 55

Author: Chip Senkbeil <rcsenkbe@us.ibm.com>
Author: Chip Senkbeil <chip.senkbeil@gmail.com>

Closes #4034 from rcsenkbeil/AddDeveloperApiToRepl and squashes the following commits:

053ca75 [Chip Senkbeil] Fixed failed build by adding missing DeveloperApi import
c1b88aa [Chip Senkbeil] Added DeveloperApi to public classes in repl
6dc1ee2 [Chip Senkbeil] Added missing method to expose error reporting flag
26fd286 [Chip Senkbeil] Refactored other Scala 2.10 classes and methods to be private/package protected where possible
925c112 [Chip Senkbeil] Added DeveloperApi and Scaladocs to SparkIMain for Scala 2.10
2015-01-16 12:56:40 -08:00
WangTaoTheTonic f7741a9a72 [SPARK-5006][Deploy]spark.port.maxRetries doesn't work
https://issues.apache.org/jira/browse/SPARK-5006

I think the issue is produced in https://github.com/apache/spark/pull/1777.

Not digging mesos's backend yet. Maybe should add same logic either.

Author: WangTaoTheTonic <barneystinson@aliyun.com>
Author: WangTao <barneystinson@aliyun.com>

Closes #3841 from WangTaoTheTonic/SPARK-5006 and squashes the following commits:

8cdf96d [WangTao] indent thing
2d86d65 [WangTaoTheTonic] fix line length
7cdfd98 [WangTaoTheTonic] fit for new HttpServer constructor
61a370d [WangTaoTheTonic] some minor fixes
bc6e1ec [WangTaoTheTonic] rebase
67bcb46 [WangTaoTheTonic] put conf at 3rd position, modify suite class, add comments
f450cd1 [WangTaoTheTonic] startServiceOnPort will use a SparkConf arg
29b751b [WangTaoTheTonic] rebase as ExecutorRunnableUtil changed to ExecutorRunnable
396c226 [WangTaoTheTonic] make the grammar more like scala
191face [WangTaoTheTonic] invalid value name
62ec336 [WangTaoTheTonic] spark.port.maxRetries doesn't work
2015-01-13 09:29:25 -08:00
Marcelo Vanzin 48cecf673c [SPARK-4048] Enhance and extend hadoop-provided profile.
This change does a few things to make the hadoop-provided profile more useful:

- Create new profiles for other libraries / services that might be provided by the infrastructure
- Simplify and fix the poms so that the profiles are only activated while building assemblies.
- Fix tests so that they're able to run when the profiles are activated
- Add a new env variable to be used by distributions that use these profiles to provide the runtime
  classpath for Spark jobs and daemons.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #2982 from vanzin/SPARK-4048 and squashes the following commits:

82eb688 [Marcelo Vanzin] Add a comment.
eb228c0 [Marcelo Vanzin] Fix borked merge.
4e38f4e [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
9ef79a3 [Marcelo Vanzin] Alternative way to propagate test classpath to child processes.
371ebee [Marcelo Vanzin] Review feedback.
52f366d [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
83099fc [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
7377e7b [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
322f882 [Marcelo Vanzin] Fix merge fail.
f24e9e7 [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
8b00b6a [Marcelo Vanzin] Merge branch 'master' into SPARK-4048
9640503 [Marcelo Vanzin] Cleanup child process log message.
115fde5 [Marcelo Vanzin] Simplify a comment (and make it consistent with another pom).
e3ab2da [Marcelo Vanzin] Fix hive-thriftserver profile.
7820d58 [Marcelo Vanzin] Fix CliSuite with provided profiles.
1be73d4 [Marcelo Vanzin] Restore flume-provided profile.
d1399ed [Marcelo Vanzin] Restore jetty dependency.
82a54b9 [Marcelo Vanzin] Remove unused profile.
5c54a25 [Marcelo Vanzin] Fix HiveThriftServer2Suite with *-provided profiles.
1fc4d0b [Marcelo Vanzin] Update dependencies for hive-thriftserver.
f7b3bbe [Marcelo Vanzin] Add snappy to hadoop-provided list.
9e4e001 [Marcelo Vanzin] Remove duplicate hive profile.
d928d62 [Marcelo Vanzin] Redirect child stderr to parent's log.
4d67469 [Marcelo Vanzin] Propagate SPARK_DIST_CLASSPATH on Yarn.
417d90e [Marcelo Vanzin] Introduce "SPARK_DIST_CLASSPATH".
2f95f0d [Marcelo Vanzin] Propagate classpath to child processes during testing.
1adf91c [Marcelo Vanzin] Re-enable maven-install-plugin for a few projects.
284dda6 [Marcelo Vanzin] Rework the "hadoop-provided" profile, add new ones.
2015-01-08 17:15:13 -08:00
Sean Owen 4cba6eb420 SPARK-4159 [CORE] Maven build doesn't run JUnit test suites
This PR:

- Reenables `surefire`, and copies config from `scalatest` (which is itself an old fork of `surefire`, so similar)
- Tells `surefire` to test only Java tests
- Enables `surefire` and `scalatest` for all children, and in turn eliminates some duplication.

For me this causes the Scala and Java tests to be run once each, it seems, as desired. It doesn't affect the SBT build but works for Maven. I still need to verify that all of the Scala tests and Java tests are being run.

Author: Sean Owen <sowen@cloudera.com>

Closes #3651 from srowen/SPARK-4159 and squashes the following commits:

2e8a0af [Sean Owen] Remove specialized SPARK_HOME setting for REPL, YARN tests as it appears to be obsolete
12e4558 [Sean Owen] Append to unit-test.log instead of overwriting, so that both surefire and scalatest output is preserved. Also standardize/correct comments a bit.
e6f8601 [Sean Owen] Reenable Java tests by reenabling surefire with config cloned from scalatest; centralize test config in the parent
2015-01-06 12:02:08 -08:00
zsxwing f1069b84b8 [SPARK-4472][Shell] Print "Spark context available as sc." only when SparkContext is created...
... successfully

It's weird that printing "Spark context available as sc" when creating SparkContext unsuccessfully.

Author: zsxwing <zsxwing@gmail.com>

Closes #3341 from zsxwing/SPARK-4472 and squashes the following commits:

4850093 [zsxwing] Print "Spark context available as sc." only when SparkContext is created successfully
2014-11-21 00:42:43 -08:00
Marcelo Vanzin 397d3aae5b Bumping version to 1.3.0-SNAPSHOT.
Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #3277 from vanzin/version-1.3 and squashes the following commits:

7c3c396 [Marcelo Vanzin] Added temp repo to sbt build.
5f404ff [Marcelo Vanzin] Add another exclusion.
19457e7 [Marcelo Vanzin] Update old version to 1.2, add temporary 1.2 repo.
3c8d705 [Marcelo Vanzin] Workaround for MIMA checks.
e940810 [Marcelo Vanzin] Bumping version to 1.3.0-SNAPSHOT.
2014-11-18 21:24:18 -08:00
Sandy Ryza f5f757e4ed SPARK-4375. no longer require -Pscala-2.10
It seems like the winds might have moved away from this approach, but wanted to post the PR anyway because I got it working and to show what it would look like.

Author: Sandy Ryza <sandy@cloudera.com>

Closes #3239 from sryza/sandy-spark-4375 and squashes the following commits:

0ffbe95 [Sandy Ryza] Enable -Dscala-2.11 in sbt
cd42d94 [Sandy Ryza] Update doc
f6644c3 [Sandy Ryza] SPARK-4375 take 2
2014-11-14 14:21:57 -08:00
Prashant Sharma daaca14c16 Support cross building for Scala 2.11
Let's give this another go using a version of Hive that shades its JLine dependency.

Author: Prashant Sharma <prashant.s@imaginea.com>
Author: Patrick Wendell <pwendell@gmail.com>

Closes #3159 from pwendell/scala-2.11-prashant and squashes the following commits:

e93aa3e [Patrick Wendell] Restoring -Phive-thriftserver profile and cleaning up build script.
f65d17d [Patrick Wendell] Fixing build issue due to merge conflict
a8c41eb [Patrick Wendell] Reverting dev/run-tests back to master state.
7a6eb18 [Patrick Wendell] Merge remote-tracking branch 'apache/master' into scala-2.11-prashant
583aa07 [Prashant Sharma] REVERT ME: removed hive thirftserver
3680e58 [Prashant Sharma] Revert "REVERT ME: Temporarily removing some Cli tests."
935fb47 [Prashant Sharma] Revert "Fixed by disabling a few tests temporarily."
925e90f [Prashant Sharma] Fixed by disabling a few tests temporarily.
2fffed3 [Prashant Sharma] Exclude groovy from sbt build, and also provide a way for such instances in future.
8bd4e40 [Prashant Sharma] Switched to gmaven plus, it fixes random failures observer with its predecessor gmaven.
5272ce5 [Prashant Sharma] SPARK_SCALA_VERSION related bugs.
2121071 [Patrick Wendell] Migrating version detection to PySpark
b1ed44d [Patrick Wendell] REVERT ME: Temporarily removing some Cli tests.
1743a73 [Patrick Wendell] Removing decimal test that doesn't work with Scala 2.11
f5cad4e [Patrick Wendell] Add Scala 2.11 docs
210d7e1 [Patrick Wendell] Revert "Testing new Hive version with shaded jline"
48518ce [Patrick Wendell] Remove association of Hive and Thriftserver profiles.
e9d0a06 [Patrick Wendell] Revert "Enable thritfserver for Scala 2.10 only"
67ec364 [Patrick Wendell] Guard building of thriftserver around Scala 2.10 check
8502c23 [Patrick Wendell] Enable thritfserver for Scala 2.10 only
e22b104 [Patrick Wendell] Small fix in pom file
ec402ab [Patrick Wendell] Various fixes
0be5a9d [Patrick Wendell] Testing new Hive version with shaded jline
4eaec65 [Prashant Sharma] Changed scripts to ignore target.
5167bea [Prashant Sharma] small correction
a4fcac6 [Prashant Sharma] Run against scala 2.11 on jenkins.
80285f4 [Prashant Sharma] MAven equivalent of setting spark.executor.extraClasspath during tests.
034b369 [Prashant Sharma] Setting test jars on executor classpath during tests from sbt.
d4874cb [Prashant Sharma] Fixed Python Runner suite. null check should be first case in scala 2.11.
6f50f13 [Prashant Sharma] Fixed build after rebasing with master. We should use ${scala.binary.version} instead of just 2.10
e56ca9d [Prashant Sharma] Print an error if build for 2.10 and 2.11 is spotted.
937c0b8 [Prashant Sharma] SCALA_VERSION -> SPARK_SCALA_VERSION
cb059b0 [Prashant Sharma] Code review
0476e5e [Prashant Sharma] Scala 2.11 support with repl and all build changes.
2014-11-11 21:36:48 -08:00
Sean Owen 363baacade SPARK-3811 [CORE] More robust / standard Utils.deleteRecursively, Utils.createTempDir
I noticed a few issues with how temp directories are created and deleted:

*Minor*

* Guava's `Files.createTempDir()` plus `File.deleteOnExit()` is used in many tests to make a temp dir, but `Utils.createTempDir()` seems to be the standard Spark mechanism
* Call to `File.deleteOnExit()` could be pushed into `Utils.createTempDir()` as well, along with this replacement
* _I messed up the message in an exception in `Utils` in SPARK-3794; fixed here_

*Bit Less Minor*

* `Utils.deleteRecursively()` fails immediately if any `IOException` occurs, instead of trying to delete any remaining files and subdirectories. I've observed this leave temp dirs around. I suggest changing it to continue in the face of an exception and throw one of the possibly several exceptions that occur at the end.
* `Utils.createTempDir()` will add a JVM shutdown hook every time the method is called. Even if the subdir is the parent of another parent dir, since this check is inside the hook. However `Utils` manages a set of all dirs to delete on shutdown already, called `shutdownDeletePaths`. A single hook can be registered to delete all of these on exit. This is how Tachyon temp paths are cleaned up in `TachyonBlockManager`.

I noticed a few other things that might be changed but wanted to ask first:

* Shouldn't the set of dirs to delete be `File`, not just `String` paths?
* `Utils` manages the set of `TachyonFile` that have been registered for deletion, but the shutdown hook is managed in `TachyonBlockManager`. Should this logic not live together, and not in `Utils`? it's more specific to Tachyon, and looks a slight bit odd to import in such a generic place.

Author: Sean Owen <sowen@cloudera.com>

Closes #2670 from srowen/SPARK-3811 and squashes the following commits:

071ae60 [Sean Owen] Update per @vanzin's review
da0146d [Sean Owen] Make Utils.deleteRecursively try to delete all paths even when an exception occurs; use one shutdown hook instead of one per method call to delete temp dirs
3a0faa4 [Sean Owen] Standardize on Utils.createTempDir instead of Files.createTempDir
2014-10-09 18:21:59 -07:00
Ahir Reddy c7818434fa [SPARK-3836] [REPL] Spark REPL optionally propagate internal exceptions
Optionally have the repl throw exceptions generated by interpreted code, instead of swallowing the exception and returning it as text output. This is useful when embedding the repl, otherwise it's not possible to know when user code threw an exception.

Author: Ahir Reddy <ahirreddy@gmail.com>

Closes #2695 from ahirreddy/repl-throw-exceptions and squashes the following commits:

bad25ee [Ahir Reddy] Style Fixes
f0e5b44 [Ahir Reddy] Fixed style
0d4413d [Ahir Reddy] propogate excetions from repl
2014-10-07 22:32:39 -07:00
Reynold Xin 3888ee2f38 [SPARK-3748] Log thread name in unit test logs
Thread names are useful for correlating failures.

Author: Reynold Xin <rxin@apache.org>

Closes #2600 from rxin/log4j and squashes the following commits:

83ffe88 [Reynold Xin] [SPARK-3748] Log thread name in unit test logs
2014-10-01 01:03:49 -07:00
Prashant Sharma f493f7982b [SPARK-3452] Maven build should skip publishing artifacts people shouldn...
...'t depend on

Publish local in maven term is `install`

and publish otherwise is `deploy`

So disabled both for following projects.

Author: Prashant Sharma <prashant.s@imaginea.com>

Closes #2329 from ScrapCodes/SPARK-3452/maven-skip-install and squashes the following commits:

257b79a [Prashant Sharma] [SPARK-3452] Maven build should skip publishing artifacts people shouldn't depend on
2014-09-14 21:17:29 -07:00
witgo 33c7a738ae SPARK-2482: Resolve sbt warnings during build
At the same time, import the `scala.language.postfixOps` and ` org.scalatest.time.SpanSugar._` cause `scala.language.postfixOps` doesn't work

Author: witgo <witgo@qq.com>

Closes #1330 from witgo/sbt_warnings3 and squashes the following commits:

179ba61 [witgo] Resolve sbt warnings during build
2014-09-11 18:44:35 -07:00
GuoQiang Li 21a1e1bb89 [SPARK-3273][SPARK-3301]We should read the version information from the same place
Author: GuoQiang Li <witgo@qq.com>

Closes #2175 from witgo/SPARK-3273 and squashes the following commits:

cf9c65a [GuoQiang Li] We should read the version information from the same place
2a44e2f [GuoQiang Li] The spark version in the welcome message of pyspark is not correct
2014-09-06 15:08:43 -07:00
GuoQiang Li 607ae39c22 [SPARK-3397] Bump pom.xml version number of master branch to 1.2.0-SNAPSHOT
Author: GuoQiang Li <witgo@qq.com>

Closes #2268 from witgo/SPARK-3397 and squashes the following commits:

eaf913f [GuoQiang Li] Bump pom.xml version number of master branch to 1.2.0-SNAPSHOT
2014-09-06 15:04:50 -07:00
Andrew Or 8f1f9aaf40 [SPARK-1919] Fix Windows spark-shell --jars
We were trying to add `file:/C:/path/to/my.jar` to the class path. We should add `C:/path/to/my.jar` instead. Tested on Windows 8.1.

Author: Andrew Or <andrewor14@gmail.com>

Closes #2211 from andrewor14/windows-shell-jars and squashes the following commits:

262c6a2 [Andrew Or] Oops... Add the new code to the correct place
0d5a0c1 [Andrew Or] Format jar path only for adding to shell classpath
42bd626 [Andrew Or] Remove unnecessary code
0049f1b [Andrew Or] Remove embarrassing log messages
b1755a0 [Andrew Or] Format jar paths properly before adding them to the classpath
2014-09-02 10:47:05 -07:00
Marcelo Vanzin b6cf134817 [SPARK-2889] Create Hadoop config objects consistently.
Different places in the code were instantiating Configuration / YarnConfiguration objects in different ways. This could lead to confusion for people who actually expected "spark.hadoop.*" options to end up in the configs used by Spark code, since that would only happen for the SparkContext's config.

This change modifies most places to use SparkHadoopUtil to initialize configs, and make that method do the translation that previously was only done inside SparkContext.

The places that were not changed fall in one of the following categories:
- Test code where this doesn't really matter
- Places deep in the code where plumbing SparkConf would be too difficult for very little gain
- Default values for arguments - since the caller can provide their own config in that case

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #1843 from vanzin/SPARK-2889 and squashes the following commits:

52daf35 [Marcelo Vanzin] Merge branch 'master' into SPARK-2889
f179013 [Marcelo Vanzin] Merge branch 'master' into SPARK-2889
51e71cf [Marcelo Vanzin] Add test to ensure that overriding Yarn configs works.
53f9506 [Marcelo Vanzin] Add DeveloperApi annotation.
3d345cb [Marcelo Vanzin] Restore old method for backwards compat.
fc45067 [Marcelo Vanzin] Merge branch 'master' into SPARK-2889
0ac3fdf [Marcelo Vanzin] Merge branch 'master' into SPARK-2889
3f26760 [Marcelo Vanzin] Compilation fix.
f16cadd [Marcelo Vanzin] Initialize config in SparkHadoopUtil.
b8ab173 [Marcelo Vanzin] Update Utils API to take a Configuration argument.
1e7003f [Marcelo Vanzin] Replace explicit Configuration instantiation with SparkHadoopUtil.
2014-08-30 14:48:07 -07:00
Chip Senkbeil 191d7cf2a6 [SPARK-3256] Added support for :cp <jar> that was broken in Scala 2.10.x for REPL
As seen with [SI-6502](https://issues.scala-lang.org/browse/SI-6502) of Scala, the _:cp_ command was broken in Scala 2.10.x. As the Spark shell is a friendly wrapper on top of the Scala REPL, it is also affected by this problem.

My solution was to alter the internal classpath and invalidate any new entries. I also had to add the ability to add new entries to the parent classloader of the interpreter (SparkIMain's global).

The advantage of this versus wiping the interpreter and replaying all of the commands is that you don't have to worry about rerunning heavy Spark-related commands (going to the cluster) or potentially reloading data that might have changed. Instead, you get to work from where you left off.

Until this is fixed upstream for 2.10.x, I had to use reflection to alter the internal compiler classpath.

The solution now looks like this:
![screen shot 2014-08-13 at 3 46 02 pm](https://cloud.githubusercontent.com/assets/2481802/3912625/f02b1440-232c-11e4-9bf6-bafb3e352d14.png)

Author: Chip Senkbeil <rcsenkbe@us.ibm.com>

Closes #1929 from rcsenkbeil/FixReplClasspathSupport and squashes the following commits:

f420cbf [Chip Senkbeil] Added SparkContext.addJar calls to support executing code on remote clusters
a826795 [Chip Senkbeil] Updated AddUrlsToClasspath to use 'new Run' suggestion over hackish compiler error
2ff1d86 [Chip Senkbeil] Added compilation failure on symbols hack to get Scala classes to load correctly
a220639 [Chip Senkbeil] Added support for :cp <jar> that was broken in Scala 2.10.x for REPL
2014-08-27 13:01:11 -07:00
Andrew Or 09f7e4587b [SPARK-2157] Enable tight firewall rules for Spark
The goal of this PR is to allow users of Spark to write tight firewall rules for their clusters. This is currently not possible because Spark uses random ports in many places, notably the communication between executors and drivers. The changes in this PR are based on top of ash211's changes in #1107.

The list covered here may or may not be the complete set of port needed for Spark to operate perfectly. However, as of the latest commit there are no known sources of random ports (except in tests). I have not documented a few of the more obscure configs.

My spark-env.sh looks like this:
```
export SPARK_MASTER_PORT=6060
export SPARK_WORKER_PORT=7070
export SPARK_MASTER_WEBUI_PORT=9090
export SPARK_WORKER_WEBUI_PORT=9091
```
and my spark-defaults.conf looks like this:
```
spark.master spark://andrews-mbp:6060
spark.driver.port 5001
spark.fileserver.port 5011
spark.broadcast.port 5021
spark.replClassServer.port 5031
spark.blockManager.port 5041
spark.executor.port 5051
```

Author: Andrew Or <andrewor14@gmail.com>
Author: Andrew Ash <andrew@andrewash.com>

Closes #1777 from andrewor14/configure-ports and squashes the following commits:

621267b [Andrew Or] Merge branch 'master' of github.com:apache/spark into configure-ports
8a6b820 [Andrew Or] Use a random UI port during tests
7da0493 [Andrew Or] Fix tests
523c30e [Andrew Or] Add test for isBindCollision
b97b02a [Andrew Or] Minor fixes
c22ad00 [Andrew Or] Merge branch 'master' of github.com:apache/spark into configure-ports
93d359f [Andrew Or] Executors connect to wrong port when collision occurs
d502e5f [Andrew Or] Handle port collisions when creating Akka systems
a2dd05c [Andrew Or] Patrick's comment nit
86461e2 [Andrew Or] Remove spark.executor.env.port and spark.standalone.client.port
1d2d5c6 [Andrew Or] Fix ports for standalone cluster mode
cb3be88 [Andrew Or] Various doc fixes (broken link, format etc.)
e837cde [Andrew Or] Remove outdated TODOs
bfbab28 [Andrew Or] Merge branch 'master' of github.com:apache/spark into configure-ports
de1b207 [Andrew Or] Update docs to reflect new ports
b565079 [Andrew Or] Add spark.ports.maxRetries
2551eb2 [Andrew Or] Remove spark.worker.watcher.port
151327a [Andrew Or] Merge branch 'master' of github.com:apache/spark into configure-ports
9868358 [Andrew Or] Add a few miscellaneous ports
6016e77 [Andrew Or] Add spark.executor.port
8d836e6 [Andrew Or] Also document SPARK_{MASTER/WORKER}_WEBUI_PORT
4d9e6f3 [Andrew Or] Fix super subtle bug
3f8e51b [Andrew Or] Correct erroneous docs...
e111d08 [Andrew Or] Add names for UI services
470f38c [Andrew Or] Special case non-"Address already in use" exceptions
1d7e408 [Andrew Or] Treat 0 ports specially + return correct ConnectionManager port
ba32280 [Andrew Or] Minor fixes
6b550b0 [Andrew Or] Assorted fixes
73fbe89 [Andrew Or] Move start service logic to Utils
ec676f4 [Andrew Or] Merge branch 'SPARK-2157' of github.com:ash211/spark into configure-ports
038a579 [Andrew Ash] Trust the server start function to report the port the service started on
7c5bdc4 [Andrew Ash] Fix style issue
0347aef [Andrew Ash] Unify port fallback logic to a single place
24a4c32 [Andrew Ash] Remove type on val to match surrounding style
9e4ad96 [Andrew Ash] Reformat for style checker
5d84e0e [Andrew Ash] Document new port configuration options
066dc7a [Andrew Ash] Fix up HttpServer port increments
cad16da [Andrew Ash] Add fallover increment logic for HttpServer
c5a0568 [Andrew Ash] Fix ConnectionManager to retry with increment
b80d2fd [Andrew Ash] Make Spark's block manager port configurable
17c79bb [Andrew Ash] Add a configuration option for spark-shell's class server
f34115d [Andrew Ash] SPARK-1176 Add port configuration for HttpBroadcast
49ee29b [Andrew Ash] SPARK-1174 Add port configuration for HttpFileServer
1c0981a [Andrew Ash] Make port in HttpServer configurable
2014-08-06 00:07:40 -07:00
Andrew Or 148af6082c [SPARK-2454] Do not ship spark home to Workers
When standalone Workers launch executors, they inherit the Spark home set by the driver. This means if the worker machines do not share the same directory structure as the driver node, the Workers will attempt to run scripts (e.g. bin/compute-classpath.sh) that do not exist locally and fail. This is a common scenario if the driver is launched from outside of the cluster.

The solution is to simply not pass the driver's Spark home to the Workers. This PR further makes an attempt to avoid overloading the usages of `spark.home`, which is now only used for setting executor Spark home on Mesos and in python.

This is based on top of #1392 and originally reported by YanTangZhai. Tested on standalone cluster.

Author: Andrew Or <andrewor14@gmail.com>

Closes #1734 from andrewor14/spark-home-reprise and squashes the following commits:

f71f391 [Andrew Or] Revert changes in python
1c2532c [Andrew Or] Merge branch 'master' of github.com:apache/spark into spark-home-reprise
188fc5d [Andrew Or] Avoid using spark.home where possible
09272b7 [Andrew Or] Always use Worker's working directory as spark home
2014-08-02 00:45:38 -07:00
Prashant Sharma 1499101113 SPARK-2632, SPARK-2576. Fixed by only importing what is necessary during class definition.
Without this patch, it imports everything available in the scope.

```scala

scala> val a = 10l
val a = 10l
a: Long = 10

scala> import a._
import a._
import a._

scala> case class A(a: Int) // show
case class A(a: Int) // show
class $read extends Serializable {
  def <init>() = {
    super.<init>;
    ()
  };
  class $iwC extends Serializable {
    def <init>() = {
      super.<init>;
      ()
    };
    class $iwC extends Serializable {
      def <init>() = {
        super.<init>;
        ()
      };
      import org.apache.spark.SparkContext._;
      class $iwC extends Serializable {
        def <init>() = {
          super.<init>;
          ()
        };
        val $VAL5 = $line5.$read.INSTANCE;
        import $VAL5.$iw.$iw.$iw.$iw.a;
        class $iwC extends Serializable {
          def <init>() = {
            super.<init>;
            ()
          };
          import a._;
          class $iwC extends Serializable {
            def <init>() = {
              super.<init>;
              ()
            };
            class $iwC extends Serializable {
              def <init>() = {
                super.<init>;
                ()
              };
              case class A extends scala.Product with scala.Serializable {
                <caseaccessor> <paramaccessor> val a: Int = _;
                def <init>(a: Int) = {
                  super.<init>;
                  ()
                }
              }
            };
            val $iw = new $iwC.<init>
          };
          val $iw = new $iwC.<init>
        };
        val $iw = new $iwC.<init>
      };
      val $iw = new $iwC.<init>
    };
    val $iw = new $iwC.<init>
  };
  val $iw = new $iwC.<init>
}
object $read extends scala.AnyRef {
  def <init>() = {
    super.<init>;
    ()
  };
  val INSTANCE = new $read.<init>
}
defined class A
```

With this patch, it just imports  only the necessary.

```scala

scala> val a = 10l
val a = 10l
a: Long = 10

scala> import a._
import a._
import a._

scala> case class A(a: Int) // show
case class A(a: Int) // show
class $read extends Serializable {
  def <init>() = {
    super.<init>;
    ()
  };
  class $iwC extends Serializable {
    def <init>() = {
      super.<init>;
      ()
    };
    class $iwC extends Serializable {
      def <init>() = {
        super.<init>;
        ()
      };
      case class A extends scala.Product with scala.Serializable {
        <caseaccessor> <paramaccessor> val a: Int = _;
        def <init>(a: Int) = {
          super.<init>;
          ()
        }
      }
    };
    val $iw = new $iwC.<init>
  };
  val $iw = new $iwC.<init>
}
object $read extends scala.AnyRef {
  def <init>() = {
    super.<init>;
    ()
  };
  val INSTANCE = new $read.<init>
}
defined class A

scala>

```

This patch also adds a `:fallback` mode on being enabled it will restore the spark-shell's 1.0.0 behaviour.

Author: Prashant Sharma <scrapcodes@gmail.com>
Author: Yin Huai <huai@cse.ohio-state.edu>
Author: Prashant Sharma <prashant.s@imaginea.com>

Closes #1635 from ScrapCodes/repl-fix-necessary-imports and squashes the following commits:

b1968d2 [Prashant Sharma] Added toschemaRDD to test case.
0b712bb [Yin Huai] Add a REPL test to test importing a method.
02ad8ff [Yin Huai] Add a REPL test for importing SQLContext.createSchemaRDD.
ed6d0c7 [Prashant Sharma] Added a fallback mode, incase users run into issues while using repl.
b63d3b2 [Prashant Sharma] SPARK-2632, SPARK-2576. Fixed by only importing what is necessary during class definition.
2014-07-31 22:57:13 -07:00
Timothy Hunter 92ca910eb8 [SPARK-2762] SparkILoop leaks memory in multi-repl configurations
This pull request is a small refactor so that a partial function (hence a closure) is not created. Instead, a regular function is used. The behavior of the code is not changed.

Author: Timothy Hunter <timhunter@databricks.com>

Closes #1674 from thunterdb/closure_issue and squashes the following commits:

e1e664d [Timothy Hunter] simplify closure
2014-07-31 10:25:40 -07:00
Prashant Sharma 81fec9922c [SPARK-2452] Create a new valid for each instead of using lineId.
Author: Prashant Sharma <prashant@apache.org>

Closes #1441 from ScrapCodes/SPARK-2452/multi-statement and squashes the following commits:

26c5c72 [Prashant Sharma] Added a test case.
7e8d28d [Prashant Sharma] SPARK-2452, create a new valid for each  instead of using lineId, because Line ids can be same sometimes.
2014-07-22 00:38:26 -07:00
Prashant Sharma 628932b8d0 [SPARK-1776] Have Spark's SBT build read dependencies from Maven.
Patch introduces the new way of working also retaining the existing ways of doing things.

For example build instruction for yarn in maven is
`mvn -Pyarn -PHadoop2.2 clean package -DskipTests`
in sbt it can become
`MAVEN_PROFILES="yarn, hadoop-2.2" sbt/sbt clean assembly`
Also supports
`sbt/sbt -Pyarn -Phadoop-2.2 -Dhadoop.version=2.2.0 clean assembly`

Author: Prashant Sharma <prashant.s@imaginea.com>
Author: Patrick Wendell <pwendell@gmail.com>

Closes #772 from ScrapCodes/sbt-maven and squashes the following commits:

a8ac951 [Prashant Sharma] Updated sbt version.
62b09bb [Prashant Sharma] Improvements.
fa6221d [Prashant Sharma] Excluding sql from mima
4b8875e [Prashant Sharma] Sbt assembly no longer builds tools by default.
72651ca [Prashant Sharma] Addresses code reivew comments.
acab73d [Prashant Sharma] Revert "Small fix to run-examples script."
ac4312c [Prashant Sharma] Revert "minor fix"
6af91ac [Prashant Sharma] Ported oldDeps back. + fixes issues with prev commit.
65cf06c [Prashant Sharma] Servelet API jars mess up with the other servlet jars on the class path.
446768e [Prashant Sharma] minor fix
89b9777 [Prashant Sharma] Merge conflicts
d0a02f2 [Prashant Sharma] Bumped up pom versions, Since the build now depends on pom it is better updated there. + general cleanups.
dccc8ac [Prashant Sharma] updated mima to check against 1.0
a49c61b [Prashant Sharma] Fix for tools jar
a2f5ae1 [Prashant Sharma] Fixes a bug in dependencies.
cf88758 [Prashant Sharma] cleanup
9439ea3 [Prashant Sharma] Small fix to run-examples script.
96cea1f [Prashant Sharma] SPARK-1776 Have Spark's SBT build read dependencies from Maven.
36efa62 [Patrick Wendell] Set project name in pom files and added eclipse/intellij plugins.
4973dbd [Patrick Wendell] Example build using pom reader.
2014-07-10 11:03:37 -07:00
Prashant Sharma d43415075b [SPARK-1199][REPL] Remove VALId and use the original import style for defined classes.
This is an alternate solution to #1176.

Author: Prashant Sharma <prashant.s@imaginea.com>

Closes #1179 from ScrapCodes/SPARK-1199/repl-fix-second-approach and squashes the following commits:

820b34b [Prashant Sharma] Here we generate two kinds of import wrappers based on whether it is a class or not.
2014-07-04 00:05:27 -07:00
witgo 41c4a33105 [SPARK-1841]: update scalatest to version 2.1.5
Author: witgo <witgo@qq.com>

Closes #713 from witgo/scalatest and squashes the following commits:

b627a6a [witgo] merge master
51fb3d6 [witgo] merge master
3771474 [witgo] fix RDDSuite
996d6f9 [witgo] fix TimeStampedWeakValueHashMap test
9dfa4e7 [witgo] merge bug
1479b22 [witgo] merge master
29b9194 [witgo] fix code style
022a7a2 [witgo] fix test dependency
a52c0fa [witgo] fix test dependency
cd8f59d [witgo] Merge branch 'master' of https://github.com/apache/spark into scalatest
046540d [witgo] fix RDDSuite.scala
2c543b9 [witgo] fix ReplSuite.scala
c458928 [witgo] update scalatest to version 2.1.5
2014-06-06 11:45:21 -07:00
Takuya UESHIN 7c160293d6 [SPARK-2029] Bump pom.xml version number of master branch to 1.1.0-SNAPSHOT.
Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #974 from ueshin/issues/SPARK-2029 and squashes the following commits:

e19e8f4 [Takuya UESHIN] Bump version number to 1.1.0-SNAPSHOT.
2014-06-05 11:27:33 -07:00
Marcelo Vanzin b77c19be05 Fix issue in ReplSuite with hadoop-provided profile.
When building the assembly with the maven "hadoop-provided"
profile, the executors were failing to come up because Hadoop classes
were not found in the classpath anymore; so add them explicitly to
the classpath using spark.executor.extraClassPath. This is only
needed for the local-cluster mode, but doesn't affect other tests,
so it's added for all of them to keep the code simpler.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #781 from vanzin/repl-test-fix and squashes the following commits:

4f0a3b0 [Marcelo Vanzin] Fix issue in ReplSuite with hadoop-provided profile.
2014-06-04 22:56:49 -07:00
Syed Hashmi 7782a304ad [SPARK-1942] Stop clearing spark.driver.port in unit tests
stop resetting spark.driver.port in unit tests (scala, java and python).

Author: Syed Hashmi <shashmi@cloudera.com>
Author: CodingCat <zhunansjtu@gmail.com>

Closes #943 from syedhashmi/master and squashes the following commits:

885f210 [Syed Hashmi] Removing unnecessary file (created by mergetool)
b8bd4b5 [Syed Hashmi] Merge remote-tracking branch 'upstream/master'
b895e59 [Syed Hashmi] Revert "[SPARK-1784] Add a new partitioner"
57b6587 [Syed Hashmi] Revert "[SPARK-1784] Add a balanced partitioner"
1574769 [Syed Hashmi] [SPARK-1942] Stop clearing spark.driver.port in unit tests
4354836 [Syed Hashmi] Revert "SPARK-1686: keep schedule() calling in the main thread"
fd36542 [Syed Hashmi] [SPARK-1784] Add a balanced partitioner
6668015 [CodingCat] SPARK-1686: keep schedule() calling in the main thread
4ca94cc [Syed Hashmi] [SPARK-1784] Add a new partitioner
2014-06-03 12:04:47 -07:00
witgo d8c005d537 Improve maven plugin configuration
Author: witgo <witgo@qq.com>

Closes #786 from witgo/maven_plugin and squashes the following commits:

5de86a2 [witgo] Merge branch 'master' of https://github.com/apache/spark into maven_plugin
c35ef73 [witgo] Improve maven plugin configuration
2014-05-31 14:36:27 -07:00
Andrew Or 5081a0a9d4 [SPARK-1900 / 1918] PySpark on YARN is broken
If I run the following on a YARN cluster
```
bin/spark-submit sheep.py --master yarn-client
```
it fails because of a mismatch in paths: `spark-submit` thinks that `sheep.py` resides on HDFS, and balks when it can't find the file there. A natural workaround is to add the `file:` prefix to the file:
```
bin/spark-submit file:/path/to/sheep.py --master yarn-client
```
However, this also fails. This time it is because python does not understand URI schemes.

This PR fixes this by automatically resolving all paths passed as command line argument to `spark-submit` properly. This has the added benefit of keeping file and jar paths consistent across different cluster modes. For python, we strip the URI scheme before we actually try to run it.

Much of the code is originally written by @mengxr. Tested on YARN cluster. More tests pending.

Author: Andrew Or <andrewor14@gmail.com>

Closes #853 from andrewor14/submit-paths and squashes the following commits:

0bb097a [Andrew Or] Format path correctly before adding it to PYTHONPATH
323b45c [Andrew Or] Include --py-files on PYTHONPATH for pyspark shell
3c36587 [Andrew Or] Improve error messages (minor)
854aa6a [Andrew Or] Guard against NPE if user gives pathological paths
6638a6b [Andrew Or] Fix spark-shell jar paths after #849 went in
3bb0359 [Andrew Or] Update more comments (minor)
2a1f8a0 [Andrew Or] Update comments (minor)
6af2c77 [Andrew Or] Merge branch 'master' of github.com:apache/spark into submit-paths
a68c4d1 [Andrew Or] Handle Windows python file path correctly
427a250 [Andrew Or] Resolve paths properly for Windows
a591a4a [Andrew Or] Update tests for resolving URIs
6c8621c [Andrew Or] Move resolveURIs to Utils
db8255e [Andrew Or] Merge branch 'master' of github.com:apache/spark into submit-paths
f542dce [Andrew Or] Fix outdated tests
691c4ce [Andrew Or] Ignore special primary resource names
5342ac7 [Andrew Or] Add missing space in error message
02f77f3 [Andrew Or] Resolve command line arguments to spark-submit properly
2014-05-24 18:01:49 -07:00
Andrew Or cce77457e0 [SPARK-1896] Respect spark.master (and --master) before MASTER in spark-shell
The hierarchy for configuring the Spark master in the shell is as follows:
```
MASTER > --master > spark.master (spark-defaults.conf)
```
This is inconsistent with the way we run normal applications, which is:
```
--master > spark.master (spark-defaults.conf) > MASTER
```

I was trying to run a shell locally on a standalone cluster launched through the ec2 scripts, which automatically set `MASTER` in spark-env.sh. It was surprising to me that `--master` didn't take effect, considering that this is the way we tell users to set their masters [here](http://people.apache.org/~pwendell/spark-1.0.0-rc7-docs/scala-programming-guide.html#initializing-spark).

Author: Andrew Or <andrewor14@gmail.com>

Closes #846 from andrewor14/shell-master and squashes the following commits:

2cb81c9 [Andrew Or] Respect spark.master before MASTER in REPL
2014-05-22 20:32:27 -07:00
Andrew Or 8edbee7d1b [SPARK-1897] Respect spark.jars (and --jars) in spark-shell
Spark shell currently overwrites `spark.jars` with `ADD_JARS`. In all modes except yarn-cluster, this means the `--jar` flag passed to `bin/spark-shell` is also discarded. However, in the [docs](http://people.apache.org/~pwendell/spark-1.0.0-rc7-docs/scala-programming-guide.html#initializing-spark), we explicitly tell the users to add the jars this way.

Author: Andrew Or <andrewor14@gmail.com>

Closes #849 from andrewor14/shell-jars and squashes the following commits:

928a7e6 [Andrew Or] ',' -> "," (minor)
afc357c [Andrew Or] Handle spark.jars == "" in SparkILoop, not SparkSubmit
c6da113 [Andrew Or] Do not set spark.jars to ""
d8549f7 [Andrew Or] Respect spark.jars and --jars in spark-shell
2014-05-22 20:25:41 -07:00
Sean Owen 7120a2979d SPARK-1798. Tests should clean up temp files
Three issues related to temp files that tests generate – these should be touched up for hygiene but are not urgent.

Modules have a log4j.properties which directs the unit-test.log output file to a directory like `[module]/target/unit-test.log`. But this ends up creating `[module]/[module]/target/unit-test.log` instead of former.

The `work/` directory is not deleted by "mvn clean", in the parent and in modules. Neither is the `checkpoint/` directory created under the various external modules.

Many tests create a temp directory, which is not usually deleted. This can be largely resolved by calling `deleteOnExit()` at creation and trying to call `Utils.deleteRecursively` consistently to clean up, sometimes in an `@After` method.

_If anyone seconds the motion, I can create a more significant change that introduces a new test trait along the lines of `LocalSparkContext`, which provides management of temp directories for subclasses to take advantage of._

Author: Sean Owen <sowen@cloudera.com>

Closes #732 from srowen/SPARK-1798 and squashes the following commits:

5af578e [Sean Owen] Try to consistently delete test temp dirs and files, and set deleteOnExit() for each
b21b356 [Sean Owen] Remove work/ and checkpoint/ dirs with mvn clean
bdd0f41 [Sean Owen] Remove duplicate module dir in log4j.properties output path for tests
2014-05-12 14:16:19 -07:00
Matei Zaharia 951a5d9398 [SPARK-1549] Add Python support to spark-submit
This PR updates spark-submit to allow submitting Python scripts (currently only with deploy-mode=client, but that's all that was supported before) and updates the PySpark code to properly find various paths, etc. One significant change is that we assume we can always find the Python files either from the Spark assembly JAR (which will happen with the Maven assembly build in make-distribution.sh) or from SPARK_HOME (which will exist in local mode even if you use sbt assembly, and should be enough for testing). This means we no longer need a weird hack to modify the environment for YARN.

This patch also updates the Python worker manager to run python with -u, which means unbuffered output (send it to our logs right away instead of waiting a while after stuff was written); this should simplify debugging.

In addition, it fixes https://issues.apache.org/jira/browse/SPARK-1709, setting the main class from a JAR's Main-Class attribute if not specified by the user, and fixes a few help strings and style issues in spark-submit.

In the future we may want to make the `pyspark` shell use spark-submit as well, but it seems unnecessary for 1.0.

Author: Matei Zaharia <matei@databricks.com>

Closes #664 from mateiz/py-submit and squashes the following commits:

15e9669 [Matei Zaharia] Fix some uses of path.separator property
051278c [Matei Zaharia] Small style fixes
0afe886 [Matei Zaharia] Add license headers
4650412 [Matei Zaharia] Add pyFiles to PYTHONPATH in executors, remove old YARN stuff, add tests
15f8e1e [Matei Zaharia] Set PYTHONPATH in PythonWorkerFactory in case it wasn't set from outside
47c0655 [Matei Zaharia] More work to make spark-submit work with Python:
d4375bd [Matei Zaharia] Clean up description of spark-submit args a bit and add Python ones
2014-05-06 15:12:35 -07:00
witgo 030f2c2126 Improved build configuration
1, Fix SPARK-1441: compile spark core error with hadoop 0.23.x
2, Fix SPARK-1491: maven hadoop-provided profile fails to build
3, Fix org.scala-lang: * ,org.apache.avro:* inconsistent versions dependency
4, A modified on the sql/catalyst/pom.xml,sql/hive/pom.xml,sql/core/pom.xml (Four spaces formatted into two spaces)

Author: witgo <witgo@qq.com>

Closes #480 from witgo/format_pom and squashes the following commits:

03f652f [witgo] review commit
b452680 [witgo] Merge branch 'master' of https://github.com/apache/spark into format_pom
bee920d [witgo] revert fix SPARK-1629: Spark Core missing commons-lang dependence
7382a07 [witgo] Merge branch 'master' of https://github.com/apache/spark into format_pom
6902c91 [witgo] fix SPARK-1629: Spark Core missing commons-lang dependence
0da4bc3 [witgo] merge master
d1718ed [witgo] Merge branch 'master' of https://github.com/apache/spark into format_pom
e345919 [witgo] add avro dependency to yarn-alpha
77fad08 [witgo] Merge branch 'master' of https://github.com/apache/spark into format_pom
62d0862 [witgo] Fix org.scala-lang: * inconsistent versions dependency
1a162d7 [witgo] Merge branch 'master' of https://github.com/apache/spark into format_pom
934f24d [witgo] review commit
cf46edc [witgo] exclude jruby
06e7328 [witgo] Merge branch 'SparkBuild' into format_pom
99464d2 [witgo] fix maven hadoop-provided profile fails to build
0c6c1fc [witgo] Fix compile spark core error with hadoop 0.23.x
6851bec [witgo] Maintain consistent SparkBuild.scala, pom.xml
2014-04-28 22:51:46 -07:00
Patrick Wendell dc3b640a0a SPARK-1619 Launch spark-shell with spark-submit
This simplifies the shell a bunch and passes all arguments through to spark-submit.

There is a tiny incompatibility from 0.9.1 which is that you can't put `-c` _or_ `--cores`, only `--cores`. However, spark-submit will give a good error message in this case, I don't think many people used this, and it's a trivial change for users.

Author: Patrick Wendell <pwendell@gmail.com>

Closes #542 from pwendell/spark-shell and squashes the following commits:

9eb3e6f [Patrick Wendell] Updating Spark docs
b552459 [Patrick Wendell] Andrew's feedback
97720fa [Patrick Wendell] Review feedback
aa2900b [Patrick Wendell] SPARK-1619 Launch spark-shell with spark-submit
2014-04-24 23:59:16 -07:00
Mridul Muralidharan 968c0187a1 SPARK-1586 Windows build fixes
Unfortunately, this is not exhaustive - particularly hive tests still fail due to path issues.

Author: Mridul Muralidharan <mridulm80@apache.org>

This patch had conflicts when merged, resolved by
Committer: Matei Zaharia <matei@databricks.com>

Closes #505 from mridulm/windows_fixes and squashes the following commits:

ef12283 [Mridul Muralidharan] Move to org.apache.commons.lang3 for StringEscapeUtils. Earlier version was buggy appparently
cdae406 [Mridul Muralidharan] Remove leaked changes from > 2G fix branch
3267f4b [Mridul Muralidharan] Fix build failures
35b277a [Mridul Muralidharan] Fix Scalastyle failures
bc69d14 [Mridul Muralidharan] Change from hardcoded path separator
10c4d78 [Mridul Muralidharan] Use explicit encoding while using getBytes
1337abd [Mridul Muralidharan] fix classpath while running in windows
2014-04-24 20:48:33 -07:00
Sandeep a03ac222d8 Fix Scala Style
Any comments are welcome

Author: Sandeep <sandeep@techaddict.me>

Closes #531 from techaddict/stylefix-1 and squashes the following commits:

7492730 [Sandeep] Pass 4
98b2428 [Sandeep] fix rxin suggestions
b5e2e6f [Sandeep] Pass 3
05932d7 [Sandeep] fix if else styling 2
08690e5 [Sandeep] fix if else styling
2014-04-24 15:07:23 -07:00
Michael Armbrust 3a390bfd80 REPL cleanup.
Author: Michael Armbrust <michael@databricks.com>

Closes #451 from marmbrus/replCleanup and squashes the following commits:

088526a [Michael Armbrust] REPL cleanup.
2014-04-19 17:33:37 -07:00
Patrick Wendell 4bc07eebbf SPARK-1480: Clean up use of classloaders
The Spark codebase is a bit fast-and-loose when accessing classloaders and this has caused a few bugs to surface in master.

This patch defines some utility methods for accessing classloaders. This makes the intention when accessing a classloader much more explicit in the code and fixes a few cases where the wrong one was chosen.

case (a) -> We want the classloader that loaded Spark
case (b) -> We want the context class loader, or if not present, we want (a)

This patch provides a better fix for SPARK-1403 (https://issues.apache.org/jira/browse/SPARK-1403) than the current work around, which it reverts. It also fixes a previously unreported bug that the `./spark-submit` script did not work for running with `local` master. It didn't work because the executor classloader did not properly delegate to the context class loader (if it is defined) and in local mode the context class loader is set by the `./spark-submit` script. A unit test is added for that case.

Author: Patrick Wendell <pwendell@gmail.com>

Closes #398 from pwendell/class-loaders and squashes the following commits:

b4a1a58 [Patrick Wendell] Minor clean up
14f1272 [Patrick Wendell] SPARK-1480: Clean up use of classloaders
2014-04-13 08:58:37 -07:00
Sandeep 930b70f052 Remove Unnecessary Whitespace's
stack these together in a commit else they show up chunk by chunk in different commits.

Author: Sandeep <sandeep@techaddict.me>

Closes #380 from techaddict/white_space and squashes the following commits:

b58f294 [Sandeep] Remove Unnecessary Whitespace's
2014-04-10 15:04:13 -07:00
Andrew Or 79820fe825 [SPARK-1276] Add a HistoryServer to render persisted UI
The new feature of event logging, introduced in #42, allows the user to persist the details of his/her Spark application to storage, and later replay these events to reconstruct an after-the-fact SparkUI.
Currently, however, a persisted UI can only be rendered through the standalone Master. This greatly limits the use case of this new feature as many people also run Spark on Yarn / Mesos.

This PR introduces a new entity called the HistoryServer, which, given a log directory, keeps track of all completed applications independently of a Spark Master. Unlike Master, the HistoryServer needs not be running while the application is still running. It is relatively light-weight in that it only maintains static information of applications and performs no scheduling.

To quickly test it out, generate event logs with ```spark.eventLog.enabled=true``` and run ```sbin/start-history-server.sh <log-dir-path>```. Your HistoryServer awaits on port 18080.

Comments and feedback are most welcome.

---

A few other changes introduced in this PR include refactoring the WebUI interface, which is beginning to have a lot of duplicate code now that we have added more functionality to it. Two new SparkListenerEvents have been introduced (SparkListenerApplicationStart/End) to keep track of application name and start/finish times. This PR also clarifies the semantics of the ReplayListenerBus introduced in #42.

A potential TODO in the future (not part of this PR) is to render live applications in addition to just completed applications. This is useful when applications fail, a condition that our current HistoryServer does not handle unless the user manually signals application completion (by creating the APPLICATION_COMPLETION file). Handling live applications becomes significantly more challenging, however, because it is now necessary to render the same SparkUI multiple times. To avoid reading the entire log every time, which is inefficient, we must handle reading the log from where we previously left off, but this becomes fairly complicated because we must deal with the arbitrary behavior of each input stream.

Author: Andrew Or <andrewor14@gmail.com>

Closes #204 from andrewor14/master and squashes the following commits:

7b7234c [Andrew Or] Finished -> Completed
b158d98 [Andrew Or] Address Patrick's comments
69d1b41 [Andrew Or] Do not block on posting SparkListenerApplicationEnd
19d5dd0 [Andrew Or] Merge github.com:apache/spark
f7f5bf0 [Andrew Or] Make history server's web UI port a Spark configuration
2dfb494 [Andrew Or] Decouple checking for application completion from replaying
d02dbaa [Andrew Or] Expose Spark version and include it in event logs
2282300 [Andrew Or] Add documentation for the HistoryServer
567474a [Andrew Or] Merge github.com:apache/spark
6edf052 [Andrew Or] Merge github.com:apache/spark
19e1fb4 [Andrew Or] Address Thomas' comments
248cb3d [Andrew Or] Limit number of live applications + add configurability
a3598de [Andrew Or] Do not close file system with ReplayBus + fix bind address
bc46fc8 [Andrew Or] Merge github.com:apache/spark
e2f4ff9 [Andrew Or] Merge github.com:apache/spark
050419e [Andrew Or] Merge github.com:apache/spark
81b568b [Andrew Or] Fix strange error messages...
0670743 [Andrew Or] Decouple page rendering from loading files from disk
1b2f391 [Andrew Or] Minor changes
a9eae7e [Andrew Or] Merge branch 'master' of github.com:apache/spark
d5154da [Andrew Or] Styling and comments
5dbfbb4 [Andrew Or] Merge branch 'master' of github.com:apache/spark
60bc6d5 [Andrew Or] First complete implementation of HistoryServer (only for finished apps)
7584418 [Andrew Or] Report application start/end times to HistoryServer
8aac163 [Andrew Or] Add basic application table
c086bd5 [Andrew Or] Add HistoryServer and scripts ++ Refactor WebUI interface
2014-04-10 10:39:34 -07:00
Holden Karau fa0524fd02 Spark-939: allow user jars to take precedence over spark jars
I still need to do a small bit of re-factoring [mostly the one Java file I'll switch it back to a Scala file and use it in both the close loaders], but comments on other things I should do would be great.

Author: Holden Karau <holden@pigscanfly.ca>

Closes #217 from holdenk/spark-939-allow-user-jars-to-take-precedence-over-spark-jars and squashes the following commits:

cf0cac9 [Holden Karau] Fix the executorclassloader
1955232 [Holden Karau] Fix long line in TestUtils
8f89965 [Holden Karau] Fix tests for new class name
7546549 [Holden Karau] CR feedback, merge some of the testutils methods down, rename the classloader
644719f [Holden Karau] User the class generator for the repl class loader tests too
f0b7114 [Holden Karau] Fix the core/src/test/scala/org/apache/spark/executor/ExecutorURLClassLoaderSuite.scala tests
204b199 [Holden Karau] Fix the generated classes
9f68f10 [Holden Karau] Start rewriting the ExecutorURLClassLoaderSuite to not use the hard coded classes
858aba2 [Holden Karau] Remove a bunch of test junk
261aaee [Holden Karau] simplify executorurlclassloader a bit
7a7bf5f [Holden Karau] CR feedback
d4ae848 [Holden Karau] rewrite component into scala
aa95083 [Holden Karau] CR feedback
7752594 [Holden Karau] re-add https comment
a0ef85a [Holden Karau] Fix style issues
125ea7f [Holden Karau] Easier to just remove those files, we don't need them
bb8d179 [Holden Karau] Fix issues with the repl class loader
241b03d [Holden Karau] fix my rat excludes
a343350 [Holden Karau] Update rat-excludes and remove a useless file
d90d217 [Holden Karau] Fix fall back with custom class loader and add a test for it
4919bf9 [Holden Karau] Fix parent calling class loader issue
8a67302 [Holden Karau] Test are good
9e2d236 [Holden Karau] It works comrade
691ee00 [Holden Karau] It works ish
dc4fe44 [Holden Karau] Does not depend on being in my home directory
47046ff [Holden Karau] Remove bad import'
22d83cb [Holden Karau] Add a test suite for the executor url class loader suite
7ef4628 [Holden Karau] Clean up
792d961 [Holden Karau] Almost works
16aecd1 [Holden Karau] Doesn't quite work
8d2241e [Holden Karau] Adda FakeClass for testing ClassLoader precedence options
648b559 [Holden Karau] Both class loaders compile. Now for testing
e1d9f71 [Holden Karau] One loader workers.
2014-04-08 22:30:03 -07:00
Aaron Davidson 0307db0f55 SPARK-1099: Introduce local[*] mode to infer number of cores
This is the default mode for running spark-shell and pyspark, intended to allow users running spark for the first time to see the performance benefits of using multiple cores, while not breaking backwards compatibility for users who use "local" mode and expect exactly 1 core.

Author: Aaron Davidson <aaron@databricks.com>

Closes #182 from aarondav/110 and squashes the following commits:

a88294c [Aaron Davidson] Rebased changes for new spark-shell
a9f393e [Aaron Davidson] SPARK-1099: Introduce local[*] mode to infer number of cores
2014-04-07 13:06:30 -07:00
Aaron Davidson 7ce52c4a7a SPARK-1349: spark-shell gets its own command history
Currently, spark-shell shares its command history with scala repl.

This fix is simply a modification of the default FileBackedHistory file setting:
https://github.com/scala/scala/blob/master/src/repl/scala/tools/nsc/interpreter/session/FileBackedHistory.scala#L77

Author: Aaron Davidson <aaron@databricks.com>

Closes #267 from aarondav/repl and squashes the following commits:

f9c62d2 [Aaron Davidson] SPARK-1349: spark-shell gets its own command history separate from scala repl
2014-04-06 17:43:44 -07:00
Prashant Sharma 60abc25254 SPARK-1096, a space after comment start style checker.
Author: Prashant Sharma <prashant.s@imaginea.com>

Closes #124 from ScrapCodes/SPARK-1096/scalastyle-comment-check and squashes the following commits:

214135a [Prashant Sharma] Review feedback.
5eba88c [Prashant Sharma] Fixed style checks for ///+ comments.
e54b2f8 [Prashant Sharma] improved message, work around.
83e7144 [Prashant Sharma] removed dependency on scalastyle in plugin, since scalastyle sbt plugin already depends on the right version. Incase we update the plugin we will have to adjust our spark-style project to depend on right scalastyle version.
810a1d6 [Prashant Sharma] SPARK-1096, a space after comment style checker.
ba33193 [Prashant Sharma] scala style as a project
2014-03-28 00:21:49 -07:00
Takuya UESHIN 3d89043b7e [SPARK-1210] Prevent ContextClassLoader of Actor from becoming ClassLoader of Executo...
...r.

Constructor of `org.apache.spark.executor.Executor` should not set context class loader of current thread, which is backend Actor's thread.

Run the following code in local-mode REPL.

```
scala> case class Foo(i: Int)
scala> val ret = sc.parallelize((1 to 100).map(Foo), 10).collect
```

This causes errors as follows:

```
ERROR actor.OneForOneStrategy: [L$line5.$read$$iwC$$iwC$$iwC$$iwC$Foo;
java.lang.ArrayStoreException: [L$line5.$read$$iwC$$iwC$$iwC$$iwC$Foo;
     at scala.runtime.ScalaRunTime$.array_update(ScalaRunTime.scala:88)
     at org.apache.spark.SparkContext$$anonfun$runJob$3.apply(SparkContext.scala:870)
     at org.apache.spark.SparkContext$$anonfun$runJob$3.apply(SparkContext.scala:870)
     at org.apache.spark.scheduler.JobWaiter.taskSucceeded(JobWaiter.scala:56)
     at org.apache.spark.scheduler.DAGScheduler.handleTaskCompletion(DAGScheduler.scala:859)
     at org.apache.spark.scheduler.DAGScheduler.processEvent(DAGScheduler.scala:616)
     at org.apache.spark.scheduler.DAGScheduler$$anonfun$start$1$$anon$2$$anonfun$receive$1.applyOrElse(DAGScheduler.scala:207)
     at akka.actor.ActorCell.receiveMessage(ActorCell.scala:498)
     at akka.actor.ActorCell.invoke(ActorCell.scala:456)
     at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:237)
     at akka.dispatch.Mailbox.run(Mailbox.scala:219)
     at akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:386)
     at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
     at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
     at scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
     at scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
```

This is because the class loaders to deserialize result `Foo` instances might be different from backend Actor's, and the Actor's class loader should be the same as Driver's.

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #15 from ueshin/wip/wrongcontextclassloader and squashes the following commits:

d79e8c0 [Takuya UESHIN] Change a parent class loader of ExecutorURLClassLoader.
c6c09b6 [Takuya UESHIN] Add a test to collect objects of class defined in repl.
43e0feb [Takuya UESHIN] Prevent ContextClassLoader of Actor from becoming ClassLoader of Executor.
2014-03-27 22:17:15 -07:00
Sean Owen 1fa48d9422 SPARK-1325. The maven build error for Spark Tools
This is just a slight variation on https://github.com/apache/spark/pull/234 and alternative suggestion for SPARK-1325. `scala-actors` is not necessary. `SparkBuild.scala` should be updated to reflect the direct dependency on `scala-reflect` and `scala-compiler`. And the `repl` build, which has the same dependencies, should also be consistent between Maven / SBT.

Author: Sean Owen <sowen@cloudera.com>
Author: witgo <witgo@qq.com>

Closes #240 from srowen/SPARK-1325 and squashes the following commits:

25bd7db [Sean Owen] Add necessary dependencies scala-reflect and scala-compiler to tools. Update repl dependencies, which are similar, to be consistent between Maven / SBT in this regard too.
2014-03-26 18:32:14 -07:00
Patrick Wendell b9be160951 SPARK-782 Clean up for ASM dependency.
This makes two changes.

1) Spark uses the shaded version of asm that is (conveniently) published
   with Kryo.
2) Existing exclude rules around asm are updated to reflect the new groupId
   of `org.ow2.asm`. This made all of the old rules not work with newer Hadoop
   versions that pull in new asm versions.

Author: Patrick Wendell <pwendell@gmail.com>

Closes #100 from pwendell/asm and squashes the following commits:

9235f3f [Patrick Wendell] SPARK-782 Clean up for ASM dependency.
2014-03-09 13:17:07 -07:00
Sandy Ryza a99fb3747a SPARK-1193. Fix indentation in pom.xmls
Author: Sandy Ryza <sandy@cloudera.com>

Closes #91 from sryza/sandy-spark-1193 and squashes the following commits:

a878124 [Sandy Ryza] SPARK-1193. Fix indentation in pom.xmls
2014-03-07 23:10:35 -08:00
Thomas Graves 7edbea41b4 SPARK-1189: Add Security to Spark - Akka, Http, ConnectionManager, UI use servlets
resubmit pull request.  was https://github.com/apache/incubator-spark/pull/332.

Author: Thomas Graves <tgraves@apache.org>

Closes #33 from tgravescs/security-branch-0.9-with-client-rebase and squashes the following commits:

dfe3918 [Thomas Graves] Fix merge conflict since startUserClass now using runAsUser
05eebed [Thomas Graves] Fix dependency lost in upmerge
d1040ec [Thomas Graves] Fix up various imports
05ff5e0 [Thomas Graves] Fix up imports after upmerging to master
ac046b3 [Thomas Graves] Merge remote-tracking branch 'upstream/master' into security-branch-0.9-with-client-rebase
13733e1 [Thomas Graves] Pass securityManager and SparkConf around where we can. Switch to use sparkConf for reading config whereever possible. Added ConnectionManagerSuite unit tests.
4a57acc [Thomas Graves] Change UI createHandler routines to createServlet since they now return servlets
2f77147 [Thomas Graves] Rework from comments
50dd9f2 [Thomas Graves] fix header in SecurityManager
ecbfb65 [Thomas Graves] Fix spacing and formatting
b514bec [Thomas Graves] Fix reference to config
ed3d1c1 [Thomas Graves] Add security.md
6f7ddf3 [Thomas Graves] Convert SaslClient and SaslServer to scala, change spark.authenticate.ui to spark.ui.acls.enable, and fix up various other things from review comments
2d9e23e [Thomas Graves] Merge remote-tracking branch 'upstream/master' into security-branch-0.9-with-client-rebase_rework
5721c5a [Thomas Graves] update AkkaUtilsSuite test for the actorSelection changes, fix typos based on comments, and remove extra lines I missed in rebase from AkkaUtils
f351763 [Thomas Graves] Add Security to Spark - Akka, Http, ConnectionManager, UI to use servlets
2014-03-06 18:27:50 -06:00
Patrick Wendell c3f5e07533 SPARK-1121: Include avro for yarn-alpha builds
This lets us explicitly include Avro based on a profile for 0.23.X
builds. It makes me sad how convoluted it is to express this logic
in Maven. @tgraves and @sryza curious if this works for you.

I'm also considering just reverting to how it was before. The only
real problem was that Spark advertised a dependency on Avro
even though it only really depends transitively on Avro through
other deps.

Author: Patrick Wendell <pwendell@gmail.com>

Closes #49 from pwendell/avro-build-fix and squashes the following commits:

8d6ee92 [Patrick Wendell] SPARK-1121: Add avro to yarn-alpha profile
2014-03-02 15:18:19 -08:00
Patrick Wendell 1fd2bfd3dd Remove remaining references to incubation
This removes some loose ends not caught by the other (incubating -> tlp) patches. @markhamstra this updates the version as you mentioned earlier.

Author: Patrick Wendell <pwendell@gmail.com>

Closes #51 from pwendell/tlp and squashes the following commits:

d553b1b [Patrick Wendell] Remove remaining references to incubation
2014-03-02 01:00:16 -08:00
Sean Owen 12bbca2065 SPARK 1084.1 (resubmitted)
(Ported from https://github.com/apache/incubator-spark/pull/637 )

Author: Sean Owen <sowen@cloudera.com>

Closes #31 from srowen/SPARK-1084.1 and squashes the following commits:

6c4a32c [Sean Owen] Suppress warnings about legitimate unchecked array creations, or change code to avoid it
f35b833 [Sean Owen] Fix two misc javadoc problems
254e8ef [Sean Owen] Fix one new style error introduced in scaladoc warning commit
5b2fce2 [Sean Owen] Fix scaladoc invocation warning, and enable javac warnings properly, with plugin config updates
007762b [Sean Owen] Remove dead scaladoc links
b8ff8cb [Sean Owen] Replace deprecated Ant <tasks> with <target>
2014-02-27 11:12:21 -08:00
CodingCat 345df5f4a9 [SPARK-1089] fix the regression problem on ADD_JARS in 0.9
https://spark-project.atlassian.net/browse/SPARK-1089

copied from JIRA, reported by @ash211

"Using the ADD_JARS environment variable with spark-shell used to add the jar to both the shell and the various workers. Now it only adds to the workers and importing a custom class in the shell is broken.
The workaround is to add custom jars to both ADD_JARS and SPARK_CLASSPATH.
We should fix ADD_JARS so it works properly again.
See various threads on the user list:
https://mail-archives.apache.org/mod_mbox/incubator-spark-user/201402.mbox/%3CCAJbo4neMLiTrnm1XbyqomWmp0m+EUcg4yE-txuRGSVKOb5KLeA@mail.gmail.com%3E
(another one that doesn't appear in the archives yet titled "ADD_JARS not working on 0.9")"

The reason of this bug is two-folds

in the current implementation of SparkILoop.scala, the settings.classpath is not set properly when the process() method is invoked

the weird behaviour of Scala 2.10, (I personally thought it is a bug)

if we simply set value of a PathSettings object (like settings.classpath), the isDefault is not set to true (this is a flag showing if the variable is modified), so it makes the PathResolver loads the default CLASSPATH environment variable value to calculated the path (see https://github.com/scala/scala/blob/2.10.x/src/compiler/scala/tools/util/PathResolver.scala#L215)

what we have to do is to manually make this flag set, (e3991d97dd/repl/src/main/scala/org/apache/spark/repl/SparkILoop.scala (L884))

Author: CodingCat <zhunansjtu@gmail.com>

Closes #13 from CodingCat/SPARK-1089 and squashes the following commits:

8af81e7 [CodingCat] impose non-null settings
9aa2125 [CodingCat] code cleaning
ce36676 [CodingCat] code cleaning
e045582 [CodingCat] fix the regression problem on ADD_JARS in 0.9
2014-02-26 23:42:15 -08:00
Sean Owen c0ef3afa82 SPARK-1071: Tidy logging strategy and use of log4j
Prompted by a recent thread on the mailing list, I tried and failed to see if Spark can be made independent of log4j. There are a few cases where control of the underlying logging is pretty useful, and to do that, you have to bind to a specific logger.

Instead I propose some tidying that leaves Spark's use of log4j, but gets rid of warnings and should still enable downstream users to switch. The idea is to pipe everything (except log4j) through SLF4J, and have Spark use SLF4J directly when logging, and where Spark needs to output info (REPL and tests), bind from SLF4J to log4j.

This leaves the same behavior in Spark. It means that downstream users who want to use something except log4j should:

- Exclude dependencies on log4j, slf4j-log4j12 from Spark
- Include dependency on log4j-over-slf4j
- Include dependency on another logger X, and another slf4j-X
- Recreate any log config that Spark does, that is needed, in the other logger's config

That sounds about right.

Here are the key changes:

- Include the jcl-over-slf4j shim everywhere by depending on it in core.
- Exclude dependencies on commons-logging from third-party libraries.
- Include the jul-to-slf4j shim everywhere by depending on it in core.
- Exclude slf4j-* dependencies from third-party libraries to prevent collision or warnings
- Added missing slf4j-log4j12 binding to GraphX, Bagel module tests

And minor/incidental changes:

- Update to SLF4J 1.7.5, which happily matches Hadoop 2’s version and is a recommended update over 1.7.2
- (Remove a duplicate HBase dependency declaration in SparkBuild.scala)
- (Remove a duplicate mockito dependency declaration that was causing warnings and bugging me)

Author: Sean Owen <sowen@cloudera.com>

Closes #570 from srowen/SPARK-1071 and squashes the following commits:

52eac9f [Sean Owen] Add slf4j-over-log4j12 dependency to core (non-test) and remove it from things that depend on core.
77a7fa9 [Sean Owen] SPARK-1071: Tidy logging strategy and use of log4j
2014-02-23 11:40:55 -08:00
CodingCat e0d49ad229 [SPARK-1090] improvement on spark_shell (help information, configure memory)
https://spark-project.atlassian.net/browse/SPARK-1090

spark-shell should print help information about parameters and should allow user to configure exe memory
there is no document about hot to set --cores/-c in spark-shell

and also

users should be able to set executor memory through command line options

In this PR I also check the format of the options passed by the user

Author: CodingCat <zhunansjtu@gmail.com>

Closes #599 from CodingCat/spark_shell_improve and squashes the following commits:

de5aa38 [CodingCat] add parameter to set driver memory
915cbf8 [CodingCat] improvement on spark_shell (help information, configure memory)
2014-02-17 15:12:52 -08:00
Patrick Wendell b69f8b2a01 Merge pull request #557 from ScrapCodes/style. Closes #557.
SPARK-1058, Fix Style Errors and Add Scala Style to Spark Build.

Author: Patrick Wendell <pwendell@gmail.com>
Author: Prashant Sharma <scrapcodes@gmail.com>

== Merge branch commits ==

commit 1a8bd1c059b842cb95cc246aaea74a79fec684f4
Author: Prashant Sharma <scrapcodes@gmail.com>
Date:   Sun Feb 9 17:39:07 2014 +0530

    scala style fixes

commit f91709887a8e0b608c5c2b282db19b8a44d53a43
Author: Patrick Wendell <pwendell@gmail.com>
Date:   Fri Jan 24 11:22:53 2014 -0800

    Adding scalastyle snapshot
2014-02-09 10:09:19 -08:00
Mark Hamstra c2341c92bb Merge pull request #542 from markhamstra/versionBump. Closes #542.
Version number to 1.0.0-SNAPSHOT

Since 0.9.0-incubating is done and out the door, we shouldn't be building 0.9.0-incubating-SNAPSHOT anymore.

@pwendell

Author: Mark Hamstra <markhamstra@gmail.com>

== Merge branch commits ==

commit 1b00a8a7c1a7f251b4bb3774b84b9e64758eaa71
Author: Mark Hamstra <markhamstra@gmail.com>
Date:   Wed Feb 5 09:30:32 2014 -0800

    Version number to 1.0.0-SNAPSHOT
2014-02-08 16:00:43 -08:00
Patrick Wendell 23034798d7 Add missing header files 2014-01-14 01:17:13 -08:00
Patrick Wendell 0bb33076e2 Removing mentions in tests 2014-01-12 16:53:58 -08:00
Matei Zaharia 11891e68c3 Merge pull request #327 from lucarosellini/master
Added ‘-i’ command line option to Spark REPL

We had to create a new implementation of both scala.tools.nsc.CompilerCommand and scala.tools.nsc.Settings, because using scala.tools.nsc.GenericRunnerSettings would bring in other options (-howtorun, -save and -execute) which don’t make sense in Spark.
Any new Spark specific command line option could now be added to org.apache.spark.repl.SparkRunnerSettings class.

Since the behavior of loading a script from the command line should be the same as loading it using the “:load” command inside the shell, the script should be loaded when the SparkContext is available, that’s why we had to move the call to ‘loadfiles(settings)’ _after_ the call to postInitialization(). This still doesn’t work if ‘isAsync = true’.
2014-01-08 00:32:18 -05:00
Luca Rosellini 4689ce29fd Added license header and removed @author tag 2014-01-07 09:44:24 +01:00
Patrick Wendell 604fad9c39 Merge remote-tracking branch 'apache-github/master' into remove-binaries
Conflicts:
	core/src/test/scala/org/apache/spark/DriverSuite.scala
	docs/python-programming-guide.md
2014-01-03 21:29:33 -08:00
Luca Rosellini 0b6db8c186 Added ‘-i’ command line option to spark REPL.
We had to create a new implementation of both scala.tools.nsc.CompilerCommand and scala.tools.nsc.Settings, because using scala.tools.nsc.GenericRunnerSettings would bring in other options (-howtorun, -save and -execute) which don’t make sense in Spark.
Any new Spark specific command line option could now be added to org.apache.spark.repl.SparkRunnerSettings class.

Since the behavior of loading a script from the command line should be the same as loading it using the “:load” command inside the shell, the script should be loaded when the SparkContext is available, that’s why we had to move the call to ‘loadfiles(settings)’ _after_ the call to postInitialization(). This still doesn’t work if ‘isAsync = true’.
2014-01-03 12:57:06 +01:00
Prashant Sharma 94f2fffa23 fixed review comments 2014-01-03 14:43:37 +05:30
Prashant Sharma 980afd280a Merge branch 'scripts-reorg' of github.com:shane-huang/incubator-spark into spark-915-segregate-scripts
Conflicts:
	bin/spark-shell
	core/pom.xml
	core/src/main/scala/org/apache/spark/SparkContext.scala
	core/src/main/scala/org/apache/spark/scheduler/cluster/mesos/CoarseMesosSchedulerBackend.scala
	core/src/main/scala/org/apache/spark/ui/UIWorkloadGenerator.scala
	core/src/test/scala/org/apache/spark/DriverSuite.scala
	python/run-tests
	sbin/compute-classpath.sh
	sbin/spark-class
	sbin/stop-slaves.sh
2014-01-02 17:55:21 +05:30
Matei Zaharia e2c68642c6 Miscellaneous fixes from code review.
Also replaced SparkConf.getOrElse with just a "get" that takes a default
value, and added getInt, getLong, etc to make code that uses this
simpler later on.
2014-01-01 22:03:39 -05:00
Matei Zaharia 642029e7f4 Various fixes to configuration code
- Got rid of global SparkContext.globalConf
- Pass SparkConf to serializers and compression codecs
- Made SparkConf public instead of private[spark]
- Improved API of SparkContext and SparkConf
- Switched executor environment vars to be passed through SparkConf
- Fixed some places that were still using system properties
- Fixed some tests, though others are still failing

This still fails several tests in core, repl and streaming, likely due
to properties not being set or cleared correctly (some of the tests run
fine in isolation).
2013-12-28 17:13:15 -05:00
Prashant Sharma 2573add94c spark-544, introducing SparkConf and related configuration overhaul. 2013-12-25 00:09:36 +05:30
Mark Hamstra 09ed7ddfa0 Use scala.binary.version in POMs 2013-12-15 12:39:58 -08:00
Prashant Sharma a854cc536d Review comments on the PR for scala 2.10 migration. 2013-12-13 15:19:51 +05:30
Prashant Sharma 17db6a9041 Style fixes and addressed review comments at #221 2013-12-10 11:47:16 +05:30
Prashant Sharma 7ad6921ae0 Incorporated Patrick's feedback comment on #211 and made maven build/dep-resolution atleast a bit faster. 2013-12-07 12:45:57 +05:30
Prashant Sharma d092a8cc6a Fixed compile time warnings and formatting post merge. 2013-11-26 15:21:50 +05:30
Aaron Davidson f629ba95b6 Various merge corrections
I've diff'd this patch against my own -- since they were both created
independently, this means that two sets of eyes have gone over all the
merge conflicts that were created, so I'm feeling significantly more
confident in the resulting PR.

@rxin has looked at the changes to the repl and is resoundingly
confident that they are correct.
2013-11-14 22:13:09 -08:00
Raymond Liu a60620b76a Merge branch 'master' into scala-2.10 2013-11-14 12:44:19 +08:00
Raymond Liu 0f2e3c6e31 Merge branch 'master' into scala-2.10 2013-11-13 16:55:11 +08:00
Reynold Xin 319299941d Propagate the SparkContext local property from the thread that calls the spark-repl to the actual execution thread. 2013-11-09 00:32:14 -08:00
Ali Ghodsi 05a0df2b9e Makes Spark SIMR ready. 2013-10-24 11:59:51 -07:00
Aaron Davidson 74737264c4 Spark shell exits if it cannot create SparkContext
Mainly, this occurs if you provide a messed up MASTER url (one that doesn't match one
of our regexes). Previously, we would default to Mesos, fail, and then start the shell
anyway, except that any Spark command would fail.
2013-10-17 18:51:19 -07:00
Andrew xia 52ccf4f859 deprecate "spark" script and SPAKR_CLASSPATH environment variable 2013-10-12 14:34:14 +08:00
Prashant Sharma 7be75682b9 Merge branch 'master' into wip-merge-master
Conflicts:
	bagel/pom.xml
	core/pom.xml
	core/src/test/scala/org/apache/spark/ui/UISuite.scala
	examples/pom.xml
	mllib/pom.xml
	pom.xml
	project/SparkBuild.scala
	repl/pom.xml
	streaming/pom.xml
	tools/pom.xml

In scala 2.10, a shorter representation is used for naming artifacts
 so changed to shorter scala version for artifacts and made it a property in pom.
2013-10-08 11:29:40 +05:30
Patrick Wendell aa9fb84994 Merging build changes in from 0.8 2013-10-05 22:07:00 -07:00
Prashant Sharma 5829692885 Merge branch 'master' into scala-2.10
Conflicts:
	core/src/main/scala/org/apache/spark/ui/jobs/JobProgressUI.scala
	docs/_config.yml
	project/SparkBuild.scala
	repl/src/main/scala/org/apache/spark/repl/SparkILoop.scala
2013-10-01 11:57:24 +05:30
Patrick Wendell e2ff59af72 Bug fix in master build 2013-09-26 13:06:51 -07:00
Prashant Sharma 7ff4c2d399 fixed maven build for scala 2.10 2013-09-26 10:48:24 +05:30
Patrick Wendell 6079721fa1 Update build version in master 2013-09-24 11:41:51 -07:00
Prashant Sharma 69fd42aee3 ported repl improvements from master 2013-09-15 15:51:02 +05:30
Prashant Sharma 383e151fd7 Merge branch 'master' of git://github.com/mesos/spark into scala-2.10
Conflicts:
	core/src/main/scala/org/apache/spark/SparkContext.scala
	project/SparkBuild.scala
2013-09-15 10:55:12 +05:30
Prashant Sharma 20c65bc334 Fixed repl suite 2013-09-15 10:43:06 +05:30
Prashant Sharma 6fcfefcb27 Few more fixes to tests broken during merge 2013-09-10 10:57:47 +05:30
Jey Kottalam 30a32c8335 Minor YARN build cleanups 2013-09-06 11:31:16 -07:00