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7687 commits

Author SHA1 Message Date
Takeshi Yamamuro e2b8cc65cd [SPARK-26897][SQL][TEST][FOLLOW-UP] Remove workaround for 2.2.0 and 2.1.x in HiveExternalCatalogVersionsSuite
## What changes were proposed in this pull request?
This pr just removed workaround for 2.2.0 and 2.1.x in HiveExternalCatalogVersionsSuite.

## How was this patch tested?
Pass the Jenkins.

Closes #23817 from maropu/SPARK-26607-FOLLOWUP.

Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-02-18 11:24:36 +08:00
Ala Luszczak 36902e10c6 [SPARK-26878] QueryTest.compare() does not handle maps with array keys correctly
## What changes were proposed in this pull request?

The previous strategy for comparing Maps leveraged sorting (key, value) tuples by their _.toString. However, the _.toString representation of an arrays has nothing to do with it's content. If a map has array keys, it's (key, value) pairs would be compared with other maps essentially at random. This could results in false negatives in tests.

This changes first compares keys together to find the matching ones, and then compares associated values.

## How was this patch tested?

New unit test added.

Closes #23789 from ala/compare-map.

Authored-by: Ala Luszczak <ala@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-18 10:39:31 +08:00
Takeshi Yamamuro dcdbd06b68 [SPARK-26897][SQL][TEST] Update Spark 2.3.x testing from HiveExternalCatalogVersionsSuite
## What changes were proposed in this pull request?
The maintenance release of `branch-2.3` (v2.3.3) vote passed, so this issue updates PROCESS_TABLES.testingVersions in HiveExternalCatalogVersionsSuite

## How was this patch tested?
Pass the Jenkins.

Closes #23807 from maropu/SPARK-26897.

Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: Takeshi Yamamuro <yamamuro@apache.org>
2019-02-18 08:05:49 +09:00
Gengliang Wang 4dce45a599 [SPARK-26744][SQL] Support schema validation in FileDataSourceV2 framework
## What changes were proposed in this pull request?

The file source has a schema validation feature, which validates 2 schemas:
1. the user-specified schema when reading.
2. the schema of input data when writing.

If a file source doesn't support the schema, we can fail the query earlier.

This PR is to implement the same feature  in the `FileDataSourceV2` framework. Comparing to `FileFormat`, `FileDataSourceV2` has multiple layers. The API is added in two places:
1. Read path: the table schema is determined in `TableProvider.getTable`. The actual read schema can be a subset of the table schema.  This PR proposes to validate the actual read schema in  `FileScan`.
2.  Write path: validate the actual output schema in `FileWriteBuilder`.

## How was this patch tested?

Unit test

Closes #23714 from gengliangwang/schemaValidationV2.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-16 17:11:36 +08:00
Gengliang Wang 4cabab8171 [SPARK-26673][FOLLOWUP][SQL] File source V2: remove duplicated broadcast object in FileWriterFactory
## What changes were proposed in this pull request?

This is a followup PR to fix two issues in #23601:
1.  the class `FileWriterFactory` contains `conf: SerializableConfiguration` as a member, which is duplicated with `WriteJobDescription. serializableHadoopConf `. By removing it we can reduce the broadcast task binary size by around 70KB
2. The test suite `OrcV1QuerySuite`/`OrcV1QuerySuite`/`OrcV1PartitionDiscoverySuite` didn't change the configuration `SQLConf.USE_V1_SOURCE_WRITER_LIST` to `"orc"`. We should set the conf.

## How was this patch tested?

Unit test

Closes #23800 from gengliangwang/reduceWriteTaskSize.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-02-16 14:44:37 +08:00
Gabor Somogyi 28ced387b9 [SPARK-26772][YARN] Delete ServiceCredentialProvider and make HadoopDelegationTokenProvider a developer API
## What changes were proposed in this pull request?

`HadoopDelegationTokenProvider` has basically the same functionality just like `ServiceCredentialProvider` so the interfaces can be merged.

`YARNHadoopDelegationTokenManager` now loads `ServiceCredentialProvider`s in one step. The drawback of this if one provider fails all others are not loaded. `HadoopDelegationTokenManager` loads `HadoopDelegationTokenProvider`s independently so it provides more robust behaviour.

In this PR I've I've made the following changes:
* Deleted `YARNHadoopDelegationTokenManager` and `ServiceCredentialProvider`
* Made `HadoopDelegationTokenProvider` a `DeveloperApi`

## How was this patch tested?

Existing unit tests.

Closes #23686 from gaborgsomogyi/SPARK-26772.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-02-15 14:43:13 -08:00
Gengliang Wang 71170e74df [SPARK-26871][SQL] File Source V2: avoid creating unnecessary FileIndex in the write path
## What changes were proposed in this pull request?

In https://github.com/apache/spark/pull/23383, the file source V2 framework is implemented. In the PR, `FileIndex` is created as a member of `FileTable`, so that we can implement partition pruning like 0f9fcabb4a in the future(As data source V2 catalog is under development, partition pruning is removed from the PR)

However, after write path of file source V2 is implemented, I find that a simple write will create an unnecessary `FileIndex`, which is required by `FileTable`. This is a sort of regression. And we can see there is a warning message when writing to ORC files
```
WARN InMemoryFileIndex: The directory file:/tmp/foo was not found. Was it deleted very recently?
```
This PR is to make `FileIndex` as a lazy value in `FileTable`, so that we can avoid creating unnecessary `FileIndex` in the write path.

## How was this patch tested?

Existing unit test

Closes #23774 from gengliangwang/moveFileIndexInV2.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-15 14:57:23 +08:00
maryannxue a7e3da42cd [SPARK-26840][SQL] Avoid cost-based join reorder in presence of join hints
## What changes were proposed in this pull request?

This is a fix for https://github.com/apache/spark/pull/23524, which did not stop cost-based join reorder when the CostBasedJoinReorder rule recurses down the tree and applies join reorder for nested joins with hints.

The issue had not been detected by the existing tests because CBO is disabled by default.

## How was this patch tested?

Enabled CBO for JoinHintSuite.

Closes #23759 from maryannxue/spark-26840.

Lead-authored-by: maryannxue <maryannxue@apache.org>
Co-authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-02-14 16:56:55 -08:00
Wenchen Fan 8656af98c0 [SPARK-26861][SQL] deprecate typed sum/count/average
## What changes were proposed in this pull request?

These builtin typed aggregate functions are not very useful:
1. users can just call the untyped ones and turn the resulting dataframe to a dataset. It has better performance.
2. the typed aggregate functions have subtle different behaviors regarding empty input.

I think we should get rid of these builtin typed agg functions and suggest users to use the untyped ones.

However, these functions are still useful as a demo of the `Aggregator` API, so I copied them to the example module.

## How was this patch tested?

N/A

Closes #23763 from cloud-fan/example.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-02-14 16:54:39 -08:00
Ryan Blue 33334e2728 [SPARK-26873][SQL] Use a consistent timestamp to build Hadoop Job IDs.
## What changes were proposed in this pull request?

Updates FileFormatWriter to create a consistent Hadoop Job ID for a write.

## How was this patch tested?

Existing tests for regressions.

Closes #23777 from rdblue/SPARK-26873-fix-file-format-writer-job-ids.

Authored-by: Ryan Blue <blue@apache.org>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-02-14 08:25:33 -08:00
Peter Toth 2228ee51ce [SPARK-26572][SQL] fix aggregate codegen result evaluation
## What changes were proposed in this pull request?

This PR is a correctness fix in `HashAggregateExec` code generation. It forces evaluation of result expressions before calling `consume()` to avoid multiple executions.

This PR fixes a use case where an aggregate is nested into a broadcast join and appears on the "stream" side. The issue is that Broadcast join generates it's own loop. And without forcing evaluation of `resultExpressions` of `HashAggregateExec` before the join's loop these expressions can be executed multiple times giving incorrect results.

## How was this patch tested?

New UT was added.

Closes #23731 from peter-toth/SPARK-26572.

Authored-by: Peter Toth <peter.toth@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-14 23:02:56 +08:00
Kent Yao ac9c0536bc [SPARK-26794][SQL] SparkSession enableHiveSupport does not point to hive but in-memory while the SparkContext exists
## What changes were proposed in this pull request?

```java
public class SqlDemo {
    public static void main(final String[] args) throws Exception {
        SparkConf conf = new SparkConf().setAppName("spark-sql-demo");
        JavaSparkContext sc = new JavaSparkContext(conf);
        SparkSession ss = SparkSession.builder().enableHiveSupport().getOrCreate();
        ss.sql("show databases").show();
    }
}
```
Before https://issues.apache.org/jira/browse/SPARK-20946, the demo above point to the right hive metastore if the hive-site.xml is present. But now it can only point to the default in-memory one.

Catalog is now as a variable shared across SparkSessions, it is instantiated with SparkContext's conf. After https://issues.apache.org/jira/browse/SPARK-20946, Session level configs are not pass to SparkContext's conf anymore, so the enableHiveSupport API takes no affect on the catalog instance.

You can set spark.sql.catalogImplementation=hive application wide to solve the problem, or never create a sc before you call SparkSession.builder().enableHiveSupport().getOrCreate()

Here we respect the SparkSession level configuration at the first time to generate catalog within SharedState

## How was this patch tested?

1. add ut
2. manually
```scala
test("enableHiveSupport has right to determine the catalog while using an existing sc") {
    val conf = new SparkConf().setMaster("local").setAppName("SharedState Test")
    val sc = SparkContext.getOrCreate(conf)
    val ss = SparkSession.builder().enableHiveSupport().getOrCreate()
    assert(ss.sharedState.externalCatalog.unwrapped.isInstanceOf[HiveExternalCatalog],
      "The catalog should be hive ")

    val ss2 = SparkSession.builder().getOrCreate()
    assert(ss2.sharedState.externalCatalog.unwrapped.isInstanceOf[HiveExternalCatalog],
      "The catalog should be shared across sessions")
  }
```

Without this fix, the above test will fail.
You can apply it to `org.apache.spark.sql.hive.HiveSharedStateSuite`,
and run,
```sbt
./build/sbt  -Phadoop-2.7 -Phive  "hive/testOnly org.apache.spark.sql.hive.HiveSharedStateSuite"
```
to verify.

Closes #23709 from yaooqinn/SPARK-26794.

Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-14 15:07:22 +08:00
Bruce Robbins f34b872aed [SPARK-26851][SQL] Fix double-checked locking in CachedRDDBuilder
## What changes were proposed in this pull request?

According to Brian Goetz et al in Java Concurrency in Practice, the double checked locking pattern has worked since Java 5, but only if the resource is declared volatile:

> Subsequent changes in the JMM (Java 5.0 and later) have enabled DCL to work if resource is made volatile, and the performance impact of this is small since volatile reads are usually only slightly more expensive than nonvolatile reads.

CachedRDDBuilder. cachedColumnBuffers and CachedRDDBuilder.clearCache both use DCL to manage the resource ``_cachedColumnBuffers``. The missing ingredient is that ``_cachedColumnBuffers`` is not volatile.

Because of this, clearCache may see ``_cachedColumnBuffers`` as null, when in fact it is not, and therefore fail to un-cache the RDD. There may be other, more subtle bugs due to visibility issues.

To avoid these issues, this PR makes ``_cachedColumnBuffers`` volatile.

## How was this patch tested?

- Existing SQL unit tests
- Existing pyspark-sql tests

Closes #23768 from bersprockets/SPARK-26851.

Authored-by: Bruce Robbins <bersprockets@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-14 14:57:25 +08:00
Dongjoon Hyun 7a8ff15ff7 [SPARK-26865][SQL] DataSourceV2Strategy should push normalized filters
## What changes were proposed in this pull request?

This PR aims to make `DataSourceV2Strategy` normalize filters like [FileSourceStrategy](https://github.com/apache/spark/blob/master/sql/core/src/main/scala/org/apache/spark/sql/execution/datasources/FileSourceStrategy.scala#L150-L158) when it pushes them into `SupportsPushDownFilters.pushFilters`.

## How was this patch tested?

Pass the Jenkins with the newly added test case.

Closes #23770 from dongjoon-hyun/SPARK-26865.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-02-13 16:04:27 -08:00
Maxim Gekk a829234df3 [SPARK-26817][CORE] Use System.nanoTime to measure time intervals
## What changes were proposed in this pull request?

In the PR, I propose to use `System.nanoTime()` instead of `System.currentTimeMillis()` in measurements of time intervals.

`System.currentTimeMillis()` returns current wallclock time and will follow changes to the system clock. Thus, negative wallclock adjustments can cause timeouts to "hang" for a long time (until wallclock time has caught up to its previous value again). This can happen when ntpd does a "step" after the network has been disconnected for some time. The most canonical example is during system bootup when DHCP takes longer than usual. This can lead to failures that are really hard to understand/reproduce. `System.nanoTime()` is guaranteed to be monotonically increasing irrespective of wallclock changes.

## How was this patch tested?

By existing test suites.

Closes #23727 from MaxGekk/system-nanotime.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-02-13 13:12:16 -06:00
Wenchen Fan 974f524992 [SPARK-26798][SQL] HandleNullInputsForUDF should trust nullability
## What changes were proposed in this pull request?

There is a very old TODO in `HandleNullInputsForUDF`, saying that we can skip the null check if input is not nullable. We leverage the nullability info at many places, we can trust it here too.

## How was this patch tested?

re-enable an ignored test

Closes #23712 from cloud-fan/minor.

Lead-authored-by: Wenchen Fan <wenchen@databricks.com>
Co-authored-by: Xiao Li <gatorsmile@gmail.com>
Signed-off-by: Takeshi Yamamuro <yamamuro@apache.org>
2019-02-14 00:22:11 +09:00
Dilip Biswal 7f44c9a252 [SPARK-26864][SQL] Query may return incorrect result when python udf is used as a join condition and the udf uses attributes from both legs of left semi join.
## What changes were proposed in this pull request?
In SPARK-25314, we supported the scenario of having a python UDF that refers to attributes from both legs of a join condition by rewriting the plan to convert an inner join or left semi join to a filter over a cross join. In case of left semi join, this transformation may cause incorrect results when the right leg of join condition produces duplicate rows based on the join condition. This fix disallows the rewrite for left semi join and raises an error in the case like we do for other types of join. In future, we should have separate rule in optimizer to convert left semi join to inner join (I am aware of one case we could do it if we leverage informational constraint i.e when we know the right side does not produce duplicates).

**Python**

```SQL
>>> from pyspark import SparkContext
>>> from pyspark.sql import SparkSession, Column, Row
>>> from pyspark.sql.functions import UserDefinedFunction, udf
>>> from pyspark.sql.types import *
>>> from pyspark.sql.utils import AnalysisException
>>>
>>> spark.conf.set("spark.sql.crossJoin.enabled", "True")
>>> left = spark.createDataFrame([Row(lc1=1, lc2=1), Row(lc1=2, lc2=2)])
>>> right = spark.createDataFrame([Row(rc1=1, rc2=1), Row(rc1=1, rc2=1)])
>>> func = udf(lambda a, b: a == b, BooleanType())
>>> df = left.join(right, func("lc1", "rc1"), "leftsemi").show()
19/02/12 16:07:10 WARN PullOutPythonUDFInJoinCondition: The join condition:<lambda>(lc1#0L, rc1#4L) of the join plan contains PythonUDF only, it will be moved out and the join plan will be turned to cross join.
+---+---+
|lc1|lc2|
+---+---+
|  1|  1|
|  1|  1|
+---+---+
```

**Scala**

```SQL
scala> val left = Seq((1, 1), (2, 2)).toDF("lc1", "lc2")
left: org.apache.spark.sql.DataFrame = [lc1: int, lc2: int]

scala> val right = Seq((1, 1), (1, 1)).toDF("rc1", "rc2")
right: org.apache.spark.sql.DataFrame = [rc1: int, rc2: int]

scala> val equal = udf((p1: Integer, p2: Integer) => {
     |   p1 == p2
     | })
equal: org.apache.spark.sql.expressions.UserDefinedFunction = SparkUserDefinedFunction($Lambda$2141/11016292394666f1b5,BooleanType,List(Some(Schema(IntegerType,true)), Some(Schema(IntegerType,true))),None,false,true)

scala> val df = left.join(right, equal(col("lc1"), col("rc1")), "leftsemi")
df: org.apache.spark.sql.DataFrame = [lc1: int, lc2: int]

scala> df.show()
+---+---+
|lc1|lc2|
+---+---+
|  1|  1|
+---+---+

```

## How was this patch tested?
Modified existing tests.

Closes #23769 from dilipbiswal/dkb_python_udf_in_join.

Authored-by: Dilip Biswal <dbiswal@us.ibm.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-13 21:14:19 +08:00
Hyukjin Kwon 8126d09fb5 [SPARK-26761][SQL][R] Vectorized R gapply() implementation
## What changes were proposed in this pull request?

This PR targets to add vectorized `gapply()` in R, Arrow optimization.

This can be tested as below:

```bash
$ ./bin/sparkR --conf spark.sql.execution.arrow.enabled=true
```

```r
df <- createDataFrame(mtcars)
collect(gapply(df,
               "gear",
               function(key, group) {
                 data.frame(gear = key[[1]], disp = mean(group$disp) > group$disp)
               },
               structType("gear double, disp boolean")))
```

### Requirements
  - R 3.5.x
  - Arrow package 0.12+
    ```bash
    Rscript -e 'remotes::install_github("apache/arrowapache-arrow-0.12.0", subdir = "r")'
    ```

**Note:** currently, Arrow R package is not in CRAN. Please take a look at ARROW-3204.
**Note:** currently, Arrow R package seems not supporting Windows. Please take a look at ARROW-3204.

### Benchmarks

**Shall**

```bash
sync && sudo purge
./bin/sparkR --conf spark.sql.execution.arrow.enabled=false
```

```bash
sync && sudo purge
./bin/sparkR --conf spark.sql.execution.arrow.enabled=true
```

**R code**

```r
rdf <- read.csv("500000.csv")
rdf <- rdf[, c("Month.of.Joining", "Weight.in.Kgs.")]  # We're only interested in the key and values to calculate.
df <- cache(createDataFrame(rdf))
count(df)

test <- function() {
  options(digits.secs = 6) # milliseconds
  start.time <- Sys.time()
  count(gapply(df,
               "Month_of_Joining",
               function(key, group) {
                 data.frame(Month_of_Joining = key[[1]], Weight_in_Kgs_ = mean(group$Weight_in_Kgs_) > group$Weight_in_Kgs_)
               },
               structType("Month_of_Joining integer, Weight_in_Kgs_ boolean")))
  end.time <- Sys.time()
  time.taken <- end.time - start.time
  print(time.taken)
}

test()
```

**Data (350 MB):**

```r
object.size(read.csv("500000.csv"))
350379504 bytes
```

"500000 Records"  http://eforexcel.com/wp/downloads-16-sample-csv-files-data-sets-for-testing/

**Results**

```
Time difference of 35.67459 secs
```

```
Time difference of 4.301399 secs
```

The performance improvement was around **829%**.

**Note that** I am 100% sure this PR improves more then 829% because I gave up testing it with non-Arrow optimization because it took super super super long when the data size becomes bigger.

### Limitations

- For now, Arrow optimization with R does not support when the data is `raw`, and when user explicitly gives float type in the schema. They produce corrupt values.

- Due to ARROW-4512, it cannot send and receive batch by batch. It has to send all batches in Arrow stream format at once. It needs improvement later.

## How was this patch tested?

Unit tests were added

**TODOs:**
- [x] Draft codes
- [x] make the tests passed
- [x] make the CRAN check pass
- [x] Performance measurement
- [x] Supportability investigation (for instance types)

Closes #23746 from HyukjinKwon/SPARK-26759.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-02-13 11:19:58 +08:00
Gengliang Wang 72a349a95d [SPARK-26857][SQL] Return UnsafeArrayData for date/timestamp type in ColumnarArray.copy()
## What changes were proposed in this pull request?

In https://github.com/apache/spark/issues/23569, the copy method of `ColumnarArray` is implemented.
To further improve it, we can return `UnsafeArrayData` for `date`/`timestamp` type in `ColumnarArray.copy()`.

## How was this patch tested?

Unit test

Closes #23761 from gengliangwang/copyDateAndTS.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Takeshi Yamamuro <yamamuro@apache.org>
2019-02-13 10:23:31 +09:00
Dilip Biswal 5a7403623d [SPARK-26853][SQL] Add example and version for commonly used aggregate function descriptions
## What changes were proposed in this pull request?
This improves the expression description for commonly used aggregate functions such as Max, Min, Count, etc.

## How was this patch tested?
Verified the function description manually from the shell.

Closes #23756 from dilipbiswal/dkb_expr_description_aggregate.

Authored-by: Dilip Biswal <dbiswal@us.ibm.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-02-11 23:24:54 -08:00
yangjie01 5864e8e474 [SPARK-25158][SQL] Executor accidentally exit because ScriptTransformationWriterThread throw Exception.
## What changes were proposed in this pull request?

Run Spark-Sql job use transform features(`ScriptTransformationExec`) with config `spark.speculation = true`, sometimes job fails and we found many Executor Dead through `Executor Tab`, through analysis log and code we found :

`ScriptTransformationExec` start a new thread(`ScriptTransformationWriterThread`), the new thread is very likely to throw `TaskKilledException`(from iter.map.foreach part) when speculation is on, this exception will captured by `SparkUncaughtExceptionHandler` which registered during Executor start, `SparkUncaughtExceptionHandler` will call `System.exit (SparkExitCode.UNCAUGHT_EXCEPTION)` to shutdown `Executor`, this is unexpected.

We should not kill the executor just because `ScriptTransformationWriterThread` fails. log the error(not only `TaskKilledException`) instead of throwing it is enough, Exception already pass to `ScriptTransformationExec` and handle by `TaskRunner`.

## How was this patch tested?

Register `TestUncaughtExceptionHandler` to test case in `ScriptTransformationSuite`, then assert there is no Uncaught Exception handled.

Before this patch "script transformation should not swallow errors from upstream operators (no serde)" and "script transformation should not swallow errors from upstream operators (with serde)"  throwing `IllegalArgumentException` and handle by `TestUncaughtExceptionHandler` .

Closes #22149 from LuciferYang/fix-transformation-task-kill.

Authored-by: yangjie01 <yangjie01@baidu.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-12 12:16:33 +08:00
Simeon Simeonov b34b4c59b4 [SPARK-26696][SQL] Makes Dataset encoder public
## What changes were proposed in this pull request?

Implements the solution proposed in [SPARK-26696](https://issues.apache.org/jira/browse/SPARK-26696), a minor refactoring that allows frameworks to perform advanced type-preserving dataset transformations without carrying `Encoder` implicits from user code.

The change allows

```scala
def foo[A](ds: Dataset[A]): Dataset[A] =
  ds.toDF().as[A](ds.encoder)
```

instead of

```scala
def foo[A: Encoder](ds: Dataset[A]): Dataset[A] =
  ds.toDF().as[A](implicitly[Encoder[A]])
```

## How was this patch tested?

This patch was tested with an automated test that was later removed as it was deemed unnecessary per the discussion in this PR.

Closes #23620 from ssimeonov/ss_SPARK-26696.

Authored-by: Simeon Simeonov <sim@fastignite.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-12 11:04:26 +08:00
Maxim Gekk 9c6efd0427 [SPARK-26740][SPARK-26654][SQL] Make statistics of timestamp/date columns independent from system time zones
## What changes were proposed in this pull request?

In the PR, I propose to covert underlying types of timestamp/date columns to strings, and store the converted values as column statistics. This makes statistics for timestamp/date columns independent from system time zone while saving and retrieving such statistics.

I bumped versions of stored statistics from 1 to 2 since the PR changes the format.

## How was this patch tested?

The changes were tested by `StatisticsCollectionSuite` and by `StatisticsSuite`.

Closes #23662 from MaxGekk/column-stats-time-date.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-12 10:58:00 +08:00
Gabor Somogyi d0443a74d1 [SPARK-26766][CORE] Remove the list of filesystems from HadoopDelegationTokenProvider.obtainDelegationTokens
## What changes were proposed in this pull request?

Delegation token providers interface now has a parameter `fileSystems` but this is needed only for `HadoopFSDelegationTokenProvider`.

In this PR I've addressed this issue in the following way:
* Removed `fileSystems` parameter from `HadoopDelegationTokenProvider`
* Moved `YarnSparkHadoopUtil.hadoopFSsToAccess` into `HadoopFSDelegationTokenProvider`
* Moved `spark.yarn.stagingDir` into core
* Moved `spark.yarn.access.namenodes` into core and renamed to `spark.kerberos.access.namenodes`
* Moved `spark.yarn.access.hadoopFileSystems` into core and renamed to `spark.kerberos.access.hadoopFileSystems`

## How was this patch tested?

Existing unit tests.

Closes #23698 from gaborgsomogyi/SPARK-26766.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-02-08 13:41:52 -08:00
Gabor Somogyi 701b06a7e2 [SPARK-26389][SS] Add force delete temp checkpoint configuration
## What changes were proposed in this pull request?

Not all users wants to keep temporary checkpoint directories. Additionally hard to restore from it.

In this PR I've added a force delete flag which is default `false`. Additionally not clear for users when temporary checkpoint directory deleted so added log messages to explain this a bit more.

## How was this patch tested?

Existing + additional unit tests.

Closes #23732 from gaborgsomogyi/SPARK-26389.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-02-08 10:22:51 -08:00
Branden Smith 63bced9375 [SPARK-26745][SQL][TESTS] JsonSuite test case: empty line -> 0 record count
## What changes were proposed in this pull request?

This PR consists of the `test` components of #23665 only, minus the associated patch from that PR.

It adds a new unit test to `JsonSuite` which verifies that the `count()` returned from a `DataFrame` loaded from JSON containing empty lines does not include those empty lines in the record count. The test runs `count` prior to otherwise reading data from the `DataFrame`, so as to catch future cases where a pre-parsing optimization might result in `count` results inconsistent with existing behavior.

This PR is intended to be deployed alongside #23667; `master` currently causes the test to fail, as described in [SPARK-26745](https://issues.apache.org/jira/browse/SPARK-26745).

## How was this patch tested?

Manual testing, existing `JsonSuite` unit tests.

Closes #23674 from sumitsu/json_emptyline_count_test.

Authored-by: Branden Smith <branden.smith@publicismedia.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-02-06 13:55:19 +08:00
zhoukang 255faaf343 [SPARK-26751][SQL] Fix memory leak when statement run in background and throw exception which is not HiveSQLException
## What changes were proposed in this pull request?
When we run in background and we get exception which is not HiveSQLException,
we may encounter memory leak since handleToOperation will not removed correctly.
The reason is below:
1. When calling operation.run() in HiveSessionImpl#executeStatementInternal we throw an exception which is not HiveSQLException
2. Then the opHandle generated by SparkSQLOperationManager will not be added into opHandleSet of HiveSessionImpl , and operationManager.closeOperation(opHandle) will not be called
3. When we close the session we will also call operationManager.closeOperation(opHandle),since we did not add this opHandle into the opHandleSet.

For the reasons above,the opHandled will always in SparkSQLOperationManager#handleToOperation,which will cause memory leak.
More details and a case has attached on https://issues.apache.org/jira/browse/SPARK-26751
This patch will always throw HiveSQLException when running in background

## How was this patch tested?
Exist UT

Closes #23673 from caneGuy/zhoukang/fix-hivesessionimpl-leak.

Authored-by: zhoukang <zhoukang199191@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-02-03 08:45:57 -06:00
Maxim Gekk 96c6c295cc [SPARK-26805][SQL] Eliminate double checking of stringToDate and stringToTimestamp inputs
## What changes were proposed in this pull request?

In the PR, I propose to eliminate checking of parsed segments inside of the `stringToDate` and `stringToTimestamp` because such checking is already performed while constructing *java.time* classes, in particular inside of `LocalDate` and `LocalTime`. As a consequence of removing the explicit checks, the `isInvalidDate` method is not needed any more, and it was removed from `DateTimeUtils`.

## How was this patch tested?

This was tested by `DateExpressionsSuite`, `DateFunctionsSuite`, `DateTimeUtilsSuite` and `CastSuite`.

Closes #23717 from MaxGekk/datetimeutils-refactoring.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-02-02 18:20:16 -06:00
Ryan Blue f72d217788
[SPARK-26677][BUILD] Update Parquet to 1.10.1 with notEq pushdown fix.
## What changes were proposed in this pull request?

Update to Parquet Java 1.10.1.

## How was this patch tested?

Added a test from HyukjinKwon that validates the notEq case from SPARK-26677.

Closes #23704 from rdblue/SPARK-26677-fix-noteq-parquet-bug.

Lead-authored-by: Ryan Blue <blue@apache.org>
Co-authored-by: Hyukjin Kwon <gurwls223@apache.org>
Co-authored-by: Ryan Blue <rdblue@users.noreply.github.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-02-02 09:17:52 -08:00
Sean Owen 8171b156eb [SPARK-26771][CORE][GRAPHX] Make .unpersist(), .destroy() consistently non-blocking by default
## What changes were proposed in this pull request?

Make .unpersist(), .destroy() non-blocking by default and adjust callers to request blocking only where important.

This also adds an optional blocking argument to Pyspark's RDD.unpersist(), which never had one.

## How was this patch tested?

Existing tests.

Closes #23685 from srowen/SPARK-26771.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-02-01 18:29:55 -06:00
Shixiong Zhu 03a928cbec
[SPARK-26806][SS] EventTimeStats.merge should handle zeros correctly
## What changes were proposed in this pull request?

Right now, EventTimeStats.merge doesn't handle `zero.merge(zero)` correctly. This will make `avg` become `NaN`. And whatever gets merged with the result of `zero.merge(zero)`, `avg` will still be `NaN`. Then finally, we call `NaN.toLong` and get `0`, and the user will see the following incorrect report:

```
"eventTime" : {
    "avg" : "1970-01-01T00:00:00.000Z",
    "max" : "2019-01-31T12:57:00.000Z",
    "min" : "2019-01-30T18:44:04.000Z",
    "watermark" : "1970-01-01T00:00:00.000Z"
  }
```

This issue was reported by liancheng .

This PR fixes the above issue.

## How was this patch tested?

The new unit tests.

Closes #23718 from zsxwing/merge-zero.

Authored-by: Shixiong Zhu <zsxwing@gmail.com>
Signed-off-by: Shixiong Zhu <zsxwing@gmail.com>
2019-02-01 11:15:05 -08:00
wuyi 8f968b4c06 [SPARK-26730][SQL] Strip redundant AssertNotNull for ExpressionEncoder's serializer
## What changes were proposed in this pull request?

For types like Product, we've already add AssertNotNull when we construct serializer(see code below), so we could strip redundant AssertNotNull for those types.

```
val fieldValue = Invoke(
    AssertNotNull(inputObject, walkedTypePath), fieldName, dataTypeFor(fieldType),
    returnNullable = !fieldType.typeSymbol.asClass.isPrimitive)
```
## How was this patch tested?

Existed.

Closes #23651 from Ngone51/dev-strip-redundant-assertnotnull-for-ecnoder-serializer.

Authored-by: wuyi <ngone_5451@163.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-02-01 10:48:37 +08:00
Gengliang Wang df4c53e44b [SPARK-26673][SQL] File source V2 writes: create framework and migrate ORC
## What changes were proposed in this pull request?

Create a framework for write path of File Source V2.
Also, migrate write path of ORC to V2.

Supported:
* Write to file as Dataframe

Not Supported:
* Partitioning, which is still under development in the data source V2 project.
* Bucketing, which is still under development in the data source V2 project.
* Catalog.

## How was this patch tested?

Unit test

Closes #23601 from gengliangwang/orc_write.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-31 21:29:01 +08:00
Wenchen Fan 0e2c487459 [SPARK-26448][SQL][FOLLOWUP] should not normalize grouping expressions for final aggregate
## What changes were proposed in this pull request?

A followup of https://github.com/apache/spark/pull/23388 .

`AggUtils.createAggregate` is not the right place to normalize the grouping expressions, as final aggregate is also created by it. The grouping expressions of final aggregate should be attributes which refer to the grouping expressions in partial aggregate.

This PR moves the normalization to the caller side of `AggUtils`.

## How was this patch tested?

existing tests

Closes #23692 from cloud-fan/follow.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-31 16:20:18 +08:00
Gengliang Wang 308996bc72 [SPARK-26716][SPARK-26765][FOLLOWUP][SQL] Clean up schema validation methods and override toString method in Avro
## What changes were proposed in this pull request?

In #23639, the API `supportDataType` is refactored. We should also remove the method `verifyWriteSchema` and `verifyReadSchema` in `DataSourceUtils`.

Since the error message use `FileFormat.toString` to specify the data source naming,  this PR also overriding the `toString` method in `AvroFileFormat`.

## How was this patch tested?

Unit test.

Closes #23699 from gengliangwang/SPARK-26716-followup.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-31 15:44:44 +08:00
Hyukjin Kwon d4d6df2f7d [SPARK-26745][SQL] Revert count optimization in JSON datasource by SPARK-24959
## What changes were proposed in this pull request?

This PR reverts JSON count optimization part of #21909.

We cannot distinguish the cases below without parsing:

```
[{...}, {...}]
```

```
[]
```

```
{...}
```

```bash
# empty string
```

when we `count()`. One line (input: IN) can be, 0 record, 1 record and multiple records and this is dependent on each input.

See also https://github.com/apache/spark/pull/23665#discussion_r251276720.

## How was this patch tested?

Manually tested.

Closes #23667 from HyukjinKwon/revert-SPARK-24959.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-31 14:32:31 +08:00
Dongjoon Hyun aeff69bd87
[SPARK-24360][SQL] Support Hive 3.1 metastore
## What changes were proposed in this pull request?

Hive 3.1.1 is released. This PR aims to support Hive 3.1.x metastore.
Please note that Hive 3.0.0 Metastore is skipped intentionally.

## How was this patch tested?

Pass the Jenkins with the updated test cases including 3.1.

Closes #23694 from dongjoon-hyun/SPARK-24360-3.1.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-30 20:33:21 -08:00
Wenchen Fan d8d2736fd1 [SPARK-26708][SQL][FOLLOWUP] put the special handling of non-cascade uncache in the uncache method
## What changes were proposed in this pull request?

This is a follow up of https://github.com/apache/spark/pull/23644/files , to make these methods less coupled with each other.

## How was this patch tested?

existing tests

Closes #23687 from cloud-fan/cache.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-31 11:04:33 +08:00
Bruce Robbins 7781c6fd73 [SPARK-26378][SQL] Restore performance of queries against wide CSV/JSON tables
## What changes were proposed in this pull request?

After [recent changes](11e5f1bcd4) to CSV parsing to return partial results for bad CSV records, queries of wide CSV tables slowed considerably. That recent change resulted in every row being recreated, even when the associated input record had no parsing issues and the user specified no corrupt record field in his/her schema.

The change to FailureSafeParser.scala also impacted queries against wide JSON tables as well.

In this PR, I propose that a row should be recreated only if columns need to be shifted due to the existence of a corrupt column field in the user-supplied schema. Otherwise, the code should use the row as-is (For CSV input, it will have values for the columns that could be converted, and also null values for columns that could not be converted).

See benchmarks below. The CSV benchmark for 1000 columns went from 120144 ms to 89069 ms, a savings of 25% (this only brings the cost down to baseline levels. Again, see benchmarks below).

Similarly, the JSON benchmark for 1000 columns (added in this PR) went from 109621 ms to 80871 ms, also a savings of 25%.

Still, partial results functionality is preserved:

<pre>
bash-3.2$ cat test2.csv
"hello",1999-08-01,"last"
"there","bad date","field"
"again","2017-11-22","in file"
bash-3.2$ bin/spark-shell
...etc...
scala> val df = spark.read.schema("a string, b date, c string").csv("test2.csv")
df: org.apache.spark.sql.DataFrame = [a: string, b: date ... 1 more field]
scala> df.show
+-----+----------+-------+
|    a|         b|      c|
+-----+----------+-------+
|hello|1999-08-01|   last|
|there|      null|  field|
|again|2017-11-22|in file|
+-----+----------+-------+
scala> val df = spark.read.schema("badRecord string, a string, b date, c string").
     | option("columnNameOfCorruptRecord", "badRecord").
     | csv("test2.csv")
df: org.apache.spark.sql.DataFrame = [badRecord: string, a: string ... 2 more fields]
scala> df.show
+--------------------+-----+----------+-------+
|           badRecord|    a|         b|      c|
+--------------------+-----+----------+-------+
|                null|hello|1999-08-01|   last|
|"there","bad date...|there|      null|  field|
|                null|again|2017-11-22|in file|
+--------------------+-----+----------+-------+
scala>
</pre>

### CSVBenchmark Benchmarks:

baseline = commit before partial results change
PR = this PR
master = master branch

[baseline_CSVBenchmark-results.txt](https://github.com/apache/spark/files/2697109/baseline_CSVBenchmark-results.txt)
[pr_CSVBenchmark-results.txt](https://github.com/apache/spark/files/2697110/pr_CSVBenchmark-results.txt)
[master_CSVBenchmark-results.txt](https://github.com/apache/spark/files/2697111/master_CSVBenchmark-results.txt)

### JSONBenchmark Benchmarks:

baseline = commit before partial results change
PR = this PR
master = master branch

[baseline_JSONBenchmark-results.txt](https://github.com/apache/spark/files/2711040/baseline_JSONBenchmark-results.txt)
[pr_JSONBenchmark-results.txt](https://github.com/apache/spark/files/2711041/pr_JSONBenchmark-results.txt)
[master_JSONBenchmark-results.txt](https://github.com/apache/spark/files/2711042/master_JSONBenchmark-results.txt)

## How was this patch tested?

- All SQL unit tests.
- Added 2 CSV benchmarks
- Python core and SQL tests

Closes #23336 from bersprockets/csv-wide-row-opt2.

Authored-by: Bruce Robbins <bersprockets@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-30 15:15:29 +08:00
Liang-Chi Hsieh 66afd869d1
[SPARK-26702][SQL][TEST] Create a test trait for Parquet and Orc test
## What changes were proposed in this pull request?

For making test suite supporting both Parquet and Orc by reusing test cases, this patch extracts the methods for testing. For example, if we need to test a common feature shared by Parquet and Orc, we should be able to write test cases once and reuse them to test both formats.

This patch extracts the methods for testing and uses a variable `dataSourceName` to set up data format to test against with.

## How was this patch tested?

Existing tests.

Closes #23628 from viirya/datasource-test.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-29 07:31:42 -08:00
Xianyang Liu 5d672b7f3e [SPARK-26763][SQL] Using fileStatus cache when filterPartitions
## What changes were proposed in this pull request?

We should pass the existed `fileStatusCache` to `InMemoryFileIndex` even though there aren't partition columns.

## How was this patch tested?

Existed test. Extra tests can be added if there is a requirement.

Closes #23683 from ConeyLiu/filestatuscache.

Authored-by: Xianyang Liu <xianyang.liu@intel.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-29 23:11:11 +08:00
Wenchen Fan e97ab1d980 [SPARK-26695][SQL] data source v2 API refactor - continuous read
## What changes were proposed in this pull request?

Following https://github.com/apache/spark/pull/23430, this PR does the API refactor for continuous read, w.r.t. the [doc](https://docs.google.com/document/d/1uUmKCpWLdh9vHxP7AWJ9EgbwB_U6T3EJYNjhISGmiQg/edit?usp=sharing)

The major changes:
1. rename `XXXContinuousReadSupport` to `XXXContinuousStream`
2. at the beginning of continuous streaming execution, convert `StreamingRelationV2` to `StreamingDataSourceV2Relation` directly, instead of `StreamingExecutionRelation`.
3. remove all the hacks as we have finished all the read side API refactor

## How was this patch tested?

existing tests

Closes #23619 from cloud-fan/continuous.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-29 00:07:27 -08:00
Takeshi Yamamuro 92706e6576
[SPARK-26747][SQL] Makes GetMapValue nullability more precise
## What changes were proposed in this pull request?
In master, `GetMapValue` nullable is always true;
cf133e6110/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/complexTypeExtractors.scala (L371)

But, If input key is foldable, we could make its nullability more precise.
This fix is the same with SPARK-26637(#23566).

## How was this patch tested?
Added tests in `ComplexTypeSuite`.

Closes #23669 from maropu/SPARK-26747.

Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-28 13:39:50 -08:00
Maxim Gekk 58e42cf506 [SPARK-26719][SQL] Get rid of java.util.Calendar in DateTimeUtils
## What changes were proposed in this pull request?

- Replacing `java.util.Calendar` in  `DateTimeUtils. truncTimestamp` and in `DateTimeUtils.getOffsetFromLocalMillis ` by equivalent code using Java 8 API for timestamp manipulations. The reason is `java.util.Calendar` is based on the hybrid calendar (Julian+Gregorian) but *java.time* classes use Proleptic Gregorian calendar which assumes by SQL standard.
-  Replacing `Calendar.getInstance()` in `DateTimeUtilsSuite` by similar code in `DateTimeTestUtils` using *java.time* classes

## How was this patch tested?

The changes were tested by existing suites: `DateExpressionsSuite`, `DateFunctionsSuite` and `DateTimeUtilsSuite`.

Closes #23641 from MaxGekk/cleanup-date-time-utils.

Authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-28 10:52:17 -06:00
Maxim Gekk bd027f6e0e [SPARK-26656][SQL] Benchmarks for date and timestamp functions
## What changes were proposed in this pull request?

Added the following benchmarks:
- Extract components from timestamp like year, month, day and etc.
- Current date and time
- Date arithmetic like date_add, date_sub
- Format dates and timestamps
- Convert timestamps from/to UTC

Closes #23661 from MaxGekk/datetime-benchmark.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-28 14:21:21 +01:00
Sean Owen d53e11ffce [SPARK-26725][TEST] Fix the input values of UnifiedMemoryManager constructor in test suites
## What changes were proposed in this pull request?

Adjust mem settings in UnifiedMemoryManager used in test suites to ha…ve execution memory > 0
Ref: https://github.com/apache/spark/pull/23457#issuecomment-457409976

## How was this patch tested?

Existing tests

Closes #23645 from srowen/SPARK-26725.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-28 12:42:14 +08:00
maryannxue ce7e7df99d [SPARK-26708][SQL] Incorrect result caused by inconsistency between a SQL cache's cached RDD and its physical plan
## What changes were proposed in this pull request?

When performing non-cascading cache invalidation, `recache` is called on the other cache entries which are dependent on the cache being invalidated. It leads to the the physical plans of those cache entries being re-compiled. For those cache entries, if the cache RDD has already been persisted, chances are there will be inconsistency between the data and the new plan. It can cause a correctness issue if the new plan's `outputPartitioning`  or `outputOrdering` is different from the that of the actual data, and meanwhile the cache is used by another query that asks for specific `outputPartitioning` or `outputOrdering` which happens to match the new plan but not the actual data.

The fix is to keep the cache entry as it is if the data has been loaded, otherwise re-build the cache entry, with a new plan and an empty cache buffer.

## How was this patch tested?

Added UT.

Closes #23644 from maryannxue/spark-26708.

Lead-authored-by: maryannxue <maryannxue@apache.org>
Co-authored-by: Xiao Li <gatorsmile@gmail.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-27 11:39:27 -08:00
Gengliang Wang 36a2e6371b
[SPARK-26716][SQL] FileFormat: the supported types of read/write should be consistent
## What changes were proposed in this pull request?

1. Remove parameter `isReadPath`. The supported types of read/write should be the same.

2. Disallow reading `NullType` for ORC data source. In #21667 and #21389, it was supposed that ORC supports reading `NullType`, but can't write it. This doesn't make sense. I read docs and did some tests. ORC doesn't support `NullType`.

## How was this patch tested?

Unit tset

Closes #23639 from gengliangwang/supportDataType.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-27 10:11:42 -08:00
Dongjoon Hyun 1ca6b8bc3d
[SPARK-26379][SS][FOLLOWUP] Use dummy TimeZoneId to avoid UnresolvedException in CurrentBatchTimestamp
## What changes were proposed in this pull request?

Spark replaces `CurrentTimestamp` with `CurrentBatchTimestamp`.
However, `CurrentBatchTimestamp` is `TimeZoneAwareExpression` while `CurrentTimestamp` isn't.
Without TimeZoneId, `CurrentBatchTimestamp` becomes unresolved and raises `UnresolvedException`.

Since `CurrentDate` is `TimeZoneAwareExpression`, there is no problem with `CurrentDate`.

This PR reverts the [previous patch](https://github.com/apache/spark/pull/23609) on `MicroBatchExecution` and fixes the root cause.

## How was this patch tested?

Pass the Jenkins with the updated test cases.

Closes #23660 from dongjoon-hyun/SPARK-26379.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-27 10:04:51 -08:00
Kris Mok 860336d31e [SPARK-26735][SQL] Verify plan integrity for special expressions
## What changes were proposed in this pull request?

Add verification of plan integrity with regards to special expressions being hosted only in supported operators. Specifically:

- `AggregateExpression`: should only be hosted in `Aggregate`, or indirectly in `Window`
- `WindowExpression`: should only be hosted in `Window`
- `Generator`: should only be hosted in `Generate`

This will help us catch errors in future optimizer rules that incorrectly hoist special expression out of their supported operator.

TODO: This PR actually caught a bug in the analyzer in the test case `SPARK-23957 Remove redundant sort from subquery plan(scalar subquery)` in `SubquerySuite`, where a `max()` aggregate function is hosted in a `Sort` operator in the analyzed plan, which is invalid. That test case is disabled in this PR.
SPARK-26741 has been opened to track the fix in the analyzer.

## How was this patch tested?

Added new test case in `OptimizerStructuralIntegrityCheckerSuite`

Closes #23658 from rednaxelafx/plan-integrity.

Authored-by: Kris Mok <kris.mok@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-26 22:26:10 -08:00
hyukjinkwon e8982ca7ad [SPARK-25981][R] Enables Arrow optimization from R DataFrame to Spark DataFrame
## What changes were proposed in this pull request?

This PR targets to support Arrow optimization for conversion from R DataFrame to Spark DataFrame.
Like PySpark side, it falls back to non-optimization code path when it's unable to use Arrow optimization.

This can be tested as below:

```bash
$ ./bin/sparkR --conf spark.sql.execution.arrow.enabled=true
```

```r
collect(createDataFrame(mtcars))
```

### Requirements
  - R 3.5.x
  - Arrow package 0.12+
    ```bash
    Rscript -e 'remotes::install_github("apache/arrowapache-arrow-0.12.0", subdir = "r")'
    ```

**Note:** currently, Arrow R package is not in CRAN. Please take a look at ARROW-3204.
**Note:** currently, Arrow R package seems not supporting Windows. Please take a look at ARROW-3204.

### Benchmarks

**Shall**

```bash
sync && sudo purge
./bin/sparkR --conf spark.sql.execution.arrow.enabled=false
```

```bash
sync && sudo purge
./bin/sparkR --conf spark.sql.execution.arrow.enabled=true
```

**R code**

```r
createDataFrame(mtcars) # Initializes
rdf <- read.csv("500000.csv")

test <- function() {
  options(digits.secs = 6) # milliseconds
  start.time <- Sys.time()
  createDataFrame(rdf)
  end.time <- Sys.time()
  time.taken <- end.time - start.time
  print(time.taken)
}

test()
```

**Data (350 MB):**

```r
object.size(read.csv("500000.csv"))
350379504 bytes
```

"500000 Records"  http://eforexcel.com/wp/downloads-16-sample-csv-files-data-sets-for-testing/

**Results**

```
Time difference of 29.9468 secs
```

```
Time difference of 3.222129 secs
```

The performance improvement was around **950%**.
Actually, this PR improves around **1200%**+ because this PR includes a small optimization about regular R DataFrame -> Spark DatFrame. See https://github.com/apache/spark/pull/22954#discussion_r231847272

### Limitations:

For now, Arrow optimization with R does not support when the data is `raw`, and when user explicitly gives float type in the schema. They produce corrupt values.
In this case, we decide to fall back to non-optimization code path.

## How was this patch tested?

Small test was added.

I manually forced to set this optimization `true` for _all_ R tests and they were _all_ passed (with few of fallback warnings).

**TODOs:**
- [x] Draft codes
- [x] make the tests passed
- [x] make the CRAN check pass
- [x] Performance measurement
- [x] Supportability investigation (for instance types)
- [x] Wait for Arrow 0.12.0 release
- [x] Fix and match it to Arrow 0.12.0

Closes #22954 from HyukjinKwon/r-arrow-createdataframe.

Lead-authored-by: hyukjinkwon <gurwls223@apache.org>
Co-authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-27 10:45:49 +08:00
heguozi e71acd9a23 [SPARK-26630][SQL] Support reading Hive-serde tables whose INPUTFORMAT is org.apache.hadoop.mapreduce
## What changes were proposed in this pull request?

When we read a hive table and create RDDs in `TableReader`, it'll throw exception `java.lang.ClassCastException: org.apache.hadoop.mapreduce.lib.input.TextInputFormat cannot be cast to org.apache.hadoop.mapred.InputFormat` if the input format class of the table is from mapreduce package.

Now we use NewHadoopRDD to deal with the new input format and keep HadoopRDD to the old one.

This PR is from #23506. We can reproduce this issue by executing the new test with the code in old version. When create a table with `org.apache.hadoop.mapreduce.....` input format, we will find the exception thrown in `org.apache.spark.rdd.HadoopRDD.getInputFormat(HadoopRDD.scala:190)`

## How was this patch tested?

Added a new test.

Closes #23559 from Deegue/fix-hadoopRDD.

Lead-authored-by: heguozi <zyzzxycj@gmail.com>
Co-authored-by: Yizhong Zhang <zyzzxycj@163.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-26 10:17:03 -08:00
SongYadong aa3d16d68b [SPARK-26698][CORE] Use ConfigEntry for hardcoded configs for memory and storage categories
## What changes were proposed in this pull request?

This PR makes hardcoded configs about spark memory and storage to use `ConfigEntry` and put them in the config package.

## How was this patch tested?

Existing unit tests.

Closes #23623 from SongYadong/configEntry_for_mem_storage.

Authored-by: SongYadong <song.yadong1@zte.com.cn>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-25 22:28:12 -06:00
Bruce Robbins f17a3d9c3a
[SPARK-26711][SQL] Lazily convert string values to BigDecimal during JSON schema inference
## What changes were proposed in this pull request?

This PR fixes a bug where JSON schema inference attempts to convert every String value to a BigDecimal regardless of the setting of "prefersDecimal". With that bug, behavior is still correct, but performance is impacted.

This PR makes this conversion lazy, so it is only performed if prefersDecimal is set to true.

Using Spark with a single executor thread to infer the schema of a single-column, 100M row JSON file, the performance impact is as follows:

option | baseline | pr
-----|----|-----
inferTimestamp=_default_<br>prefersDecimal=_default_ | 12.5 minutes | 6.1 minutes |
inferTimestamp=false<br>prefersDecimal=_default_ | 6.5 minutes | 49 seconds |
inferTimestamp=false<br>prefersDecimal=true | 6.5 minutes | 6.5 minutes |

## How was this patch tested?

I ran JsonInferSchemaSuite and JsonSuite. Also, I ran manual tests to see performance impact (see above).

Closes #23653 from bersprockets/SPARK-26711_improved.

Authored-by: Bruce Robbins <bersprockets@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-25 16:14:38 -08:00
Jungtaek Lim (HeartSaVioR) a4e48359ac
[SPARK-26379][SS] Fix issue on adding current_timestamp/current_date to streaming query
## What changes were proposed in this pull request?

This patch proposes to fix issue on adding `current_timestamp` / `current_date` with streaming query.

The root reason is that Spark transforms `CurrentTimestamp`/`CurrentDate` to `CurrentBatchTimestamp` in MicroBatchExecution which makes transformed attributes not-yet-resolved. They will be resolved by IncrementalExecution.
(In ContinuousExecution, Spark doesn't allow using `current_timestamp` and `current_date` so it has been OK.)

It's OK for DataSource V1 sink because it simply leverages transformed logical plan and don't evaluate until they're resolved, but for DataSource V2 sink, Spark tries to extract the schema of transformed logical plan in prior to IncrementalExecution, and unresolved attributes will raise errors.

This patch fixes the issue via having separate pre-resolved logical plan to pass the schema to StreamingWriteSupport safely.

## How was this patch tested?

Added UT.

Closes #23609 from HeartSaVioR/SPARK-26379.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-25 14:58:03 -08:00
Jungtaek Lim (HeartSaVioR) 5f3658a8d8 [SPARK-26170][SS] Add missing metrics in FlatMapGroupsWithState
## What changes were proposed in this pull request?

This patch addresses measuring possible metrics in StateStoreWriter to FlatMapGroupsWithStateExec. Please note that some metrics like time to remove elements are not addressed because they are coupled with state function.

## How was this patch tested?

Manually tested with https://github.com/apache/spark/blob/master/examples/src/main/scala/org/apache/spark/examples/sql/streaming/StructuredSessionization.scala.

Snapshots below:

![screen shot 2018-11-26 at 4 13 40 pm](https://user-images.githubusercontent.com/1317309/48999346-b5f7b400-f199-11e8-89c7-8795f13470d6.png)
![screen shot 2018-11-26 at 4 13 54 pm](https://user-images.githubusercontent.com/1317309/48999347-b5f7b400-f199-11e8-91ef-ef0b2f816b2e.png)

Closes #23142 from HeartSaVioR/SPARK-26170.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan@gmail.com>
Signed-off-by: Jose Torres <torres.joseph.f+github@gmail.com>
2019-01-25 13:37:42 -08:00
Gabor Somogyi 773efede20 [SPARK-26254][CORE] Extract Hive + Kafka dependencies from Core.
## What changes were proposed in this pull request?

There are ugly provided dependencies inside core for the following:
* Hive
* Kafka

In this PR I've extracted them out. This PR contains the following:
* Token providers are now loaded with service loader
* Hive token provider moved to hive project
* Kafka token provider extracted into a new project

## How was this patch tested?

Existing + newly added unit tests.
Additionally tested on cluster.

Closes #23499 from gaborgsomogyi/SPARK-26254.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-01-25 10:36:00 -08:00
Maxim Gekk e3411a82c3 [SPARK-26720][SQL] Remove DateTimeUtils methods based on system default time zone
## What changes were proposed in this pull request?

In the PR, I propose to remove the following methods from `DateTimeUtils`:
- `timestampAddInterval` and `stringToTimestamp` - used only in test suites
- `truncTimestamp`, `getSeconds`, `getMinutes`, `getHours` - those methods assume system default time zone. They are not used in Spark.

## How was this patch tested?

This was tested by `DateTimeUtilsSuite` and `UnsafeArraySuite`.

Closes #23643 from MaxGekk/unused-date-time-utils.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-25 17:06:22 +08:00
Gabor Somogyi 9452e0508a
[SPARK-26649][SS] Add DSv2 noop sink
## What changes were proposed in this pull request?

Noop data source for batch was added in [#23471](https://github.com/apache/spark/pull/23471).
In this PR I've added the streaming part.

## How was this patch tested?

Additional unit tests.

Closes #23631 from gaborgsomogyi/SPARK-26649.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-24 19:25:38 -08:00
Gengliang Wang f5b9370da2 [SPARK-26709][SQL] OptimizeMetadataOnlyQuery does not handle empty records correctly
## What changes were proposed in this pull request?

When reading from empty tables, the optimization `OptimizeMetadataOnlyQuery` may return wrong results:
```
sql("CREATE TABLE t (col1 INT, p1 INT) USING PARQUET PARTITIONED BY (p1)")
sql("INSERT INTO TABLE t PARTITION (p1 = 5) SELECT ID FROM range(1, 1)")
sql("SELECT MAX(p1) FROM t")
```
The result is supposed to be `null`. However, with the optimization the result is `5`.

The rule is originally ported from https://issues.apache.org/jira/browse/HIVE-1003 in #13494. In Hive, the rule is disabled by default in a later release(https://issues.apache.org/jira/browse/HIVE-15397), due to the same problem.

It is hard to completely avoid the correctness issue. Because data sources like Parquet can be metadata-only. Spark can't tell whether it is empty or not without actually reading it. This PR disable the optimization by default.

## How was this patch tested?

Unit test

Closes #23635 from gengliangwang/optimizeMetadata.

Lead-authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Co-authored-by: Xiao Li <gatorsmile@gmail.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-24 18:24:49 -08:00
Tom van Bussel 9813b1d074 [SPARK-26690] Track query execution and time cost for checkpoints
## What changes were proposed in this pull request?

Checkpoints of Dataframes currently do not show up in SQL UI. This PR fixes that by setting an execution id for the execution of the checkpoint by wrapping the checkpoint code with a `withAction`.

## How was this patch tested?

A unit test was added to DatasetSuite.

Closes #23636 from tomvanbussel/SPARK-26690.

Authored-by: Tom van Bussel <tom.vanbussel@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-24 16:44:39 +01:00
Bruce Robbins d4a30fa9af [SPARK-26680][SQL] Eagerly create inputVars while conditions are appropriate
## What changes were proposed in this pull request?

When a user passes a Stream to groupBy, ```CodegenSupport.consume``` ends up lazily generating ```inputVars``` from a Stream, since the field ```output``` will be a Stream. At the time ```output.zipWithIndex.map``` is called, conditions are correct. However, by the time the map operation actually executes, conditions are no longer appropriate. The closure used by the map operation ends up using a reference to the partially created ```inputVars```. As a result, a StackOverflowError occurs.

This PR ensures that ```inputVars``` is eagerly created while conditions are appropriate. It seems this was also an issue with the code path for creating ```inputVars``` from ```outputVars``` (SPARK-25767). I simply extended the solution for that code path to encompass both code paths.

## How was this patch tested?

SQL unit tests
new test
python tests

Closes #23617 from bersprockets/SPARK-26680_opt1.

Authored-by: Bruce Robbins <bersprockets@gmail.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-24 11:18:08 +01:00
Ryan Blue d5a97c1c2c [SPARK-26682][SQL] Use taskAttemptID instead of attemptNumber for Hadoop.
## What changes were proposed in this pull request?

Updates the attempt ID used by FileFormatWriter. Tasks in stage attempts use the same task attempt number and could conflict. Using Spark's task attempt ID guarantees that Hadoop TaskAttemptID instances are unique.

## How was this patch tested?

Existing tests. Also validated that we no longer detect this failure case in our logs after deployment.

Closes #23608 from rdblue/SPARK-26682-fix-hadoop-task-attempt-id.

Authored-by: Ryan Blue <blue@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-24 12:45:25 +08:00
Dave DeCaprio d0e9219e03 [SPARK-26617][SQL] Cache manager locks
## What changes were proposed in this pull request?

Fixed several places in CacheManager where a write lock was being held while running the query optimizer.  This could cause a very lock block if the query optimization takes a long time.  This builds on changes from [SPARK-26548] that fixed this issue for one specific case in the CacheManager.

gatorsmile This is very similar to the PR you approved last week.

## How was this patch tested?

Has been tested on a live system where the blocking was causing major issues and it is working well.
CacheManager has no explicit unit test but is used in many places internally as part of the SharedState.

Closes #23539 from DaveDeCaprio/cache-manager-locks.

Lead-authored-by: Dave DeCaprio <daved@alum.mit.edu>
Co-authored-by: David DeCaprio <daved@alum.mit.edu>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-24 10:48:48 +08:00
ayudovin 11be22bb5e [SPARK-25713][SQL] implementing copy for ColumnArray
## What changes were proposed in this pull request?

Implement copy() for ColumnarArray

## How was this patch tested?
 Updating test case to existing tests in ColumnVectorSuite

Closes #23569 from ayudovin/copy-for-columnArray.

Authored-by: ayudovin <a.yudovin6695@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-24 10:35:44 +08:00
Anton Okolnychyi 0df29bfbdc
[SPARK-26706][SQL] Fix illegalNumericPrecedence for ByteType
## What changes were proposed in this pull request?

This PR contains a minor change in `Cast$mayTruncate` that fixes its logic for bytes.

Right now, `mayTruncate(ByteType, LongType)` returns `false` while `mayTruncate(ShortType, LongType)` returns `true`. Consequently, `spark.range(1, 3).as[Byte]` and `spark.range(1, 3).as[Short]` behave differently.

Potentially, this bug can silently corrupt someone's data.
```scala
// executes silently even though Long is converted into Byte
spark.range(Long.MaxValue - 10, Long.MaxValue).as[Byte]
  .map(b => b - 1)
  .show()
+-----+
|value|
+-----+
|  -12|
|  -11|
|  -10|
|   -9|
|   -8|
|   -7|
|   -6|
|   -5|
|   -4|
|   -3|
+-----+
// throws an AnalysisException: Cannot up cast `id` from bigint to smallint as it may truncate
spark.range(Long.MaxValue - 10, Long.MaxValue).as[Short]
  .map(s => s - 1)
  .show()
```
## How was this patch tested?

This PR comes with a set of unit tests.

Closes #23632 from aokolnychyi/cast-fix.

Authored-by: Anton Okolnychyi <aokolnychyi@apple.com>
Signed-off-by: DB Tsai <d_tsai@apple.com>
2019-01-24 00:12:26 +00:00
Ryan Blue d008e23ab5 [SPARK-26681][SQL] Support Ammonite inner-class scopes.
## What changes were proposed in this pull request?

This adds a new pattern to recognize Ammonite REPL classes and return the correct scope.

## How was this patch tested?

Manually tested with Spark in an Ammonite session.

Closes #23607 from rdblue/SPARK-26681-support-ammonite-scopes.

Authored-by: Ryan Blue <blue@apache.org>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-23 08:50:03 -06:00
Maxim Gekk 46d5bb9a0f [SPARK-26653][SQL] Use Proleptic Gregorian calendar in parsing JDBC lower/upper bounds
## What changes were proposed in this pull request?

In the PR, I propose using of the `stringToDate` and `stringToTimestamp` methods in parsing JDBC lower/upper bounds of the partition column if it has `DateType` or `TimestampType`. Since those methods have been ported on Proleptic Gregorian calendar by #23512, the PR switches parsing of JDBC bounds of the partition column on the calendar as well.

## How was this patch tested?

This was tested by `JDBCSuite`.

Closes #23597 from MaxGekk/jdbc-parse-timestamp-bounds.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-23 20:23:17 +08:00
Takeshi Yamamuro 1ed1b4d8e1 [SPARK-26637][SQL] Makes GetArrayItem nullability more precise
## What changes were proposed in this pull request?
In the master, GetArrayItem nullable is always true;
cf133e6110/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/complexTypeExtractors.scala (L236)

But, If input array size is constant and ordinal is foldable, we could make GetArrayItem nullability more precise. This pr added code to make `GetArrayItem` nullability more precise.

## How was this patch tested?
Added tests in `ComplexTypeSuite`.

Closes #23566 from maropu/GetArrayItemNullability.

Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-23 15:33:02 +08:00
Kris Mok 02d8ae3d59
[SPARK-26661][SQL] Show actual class name of the writing command in CTAS explain
## What changes were proposed in this pull request?

The explain output of the Hive CTAS command, regardless of whether it's actually writing via Hive's SerDe or converted into using Spark's data source, would always show that it's using `InsertIntoHiveTable` because it's hardcoded.

e.g.
```
Execute OptimizedCreateHiveTableAsSelectCommand [Database:default, TableName: foo, InsertIntoHiveTable]
```
This CTAS is converted into using Spark's data source, but it still says `InsertIntoHiveTable` in the explain output.

It's better to show the actual class name of the writing command used. For the example above, it'd be:
```
Execute OptimizedCreateHiveTableAsSelectCommand [Database:default, TableName: foo, InsertIntoHadoopFsRelationCommand]
```

## How was this patch tested?

Added test case in `HiveExplainSuite`

Closes #23582 from rednaxelafx/fix-explain-1.

Authored-by: Kris Mok <kris.mok@databricks.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-22 13:55:41 -08:00
Maxim Gekk 64ce1c9f93 [SPARK-26657][SQL] Use Proleptic Gregorian calendar in DayWeek and in WeekOfYear
## What changes were proposed in this pull request?

The expressions `DayWeek`, `DayOfWeek`, `WeekDay` and `WeekOfYear` are changed to use Proleptic Gregorian calendar instead of the hybrid one (Julian+Gregorian). This was achieved by using Java 8 API for date/timestamp manipulation, in particular the `LocalDate` class.

Week of year calculation is performed according to ISO-8601. The first week of a week-based-year is the first Monday-based week of the standard ISO year that has at least 4 days in the new year (see https://docs.oracle.com/javase/8/docs/api/java/time/temporal/IsoFields.html).

## How was this patch tested?

The changes were tested by `DateExpressionsSuite` and `DateFunctionsSuite`.

Closes #23594 from MaxGekk/dayweek-gregorian.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-22 17:33:29 +01:00
Kazuaki Ishizaki 7bf0794651 [SPARK-26463][CORE] Use ConfigEntry for hardcoded configs for scheduler categories.
## What changes were proposed in this pull request?

The PR makes hardcoded `spark.dynamicAllocation`, `spark.scheduler`, `spark.rpc`, `spark.task`, `spark.speculation`, and `spark.cleaner` configs to use `ConfigEntry`.

## How was this patch tested?

Existing tests

Closes #23416 from kiszk/SPARK-26463.

Authored-by: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-22 07:44:36 -06:00
Liang-Chi Hsieh f92d276653 [SPARK-25811][PYSPARK] Raise a proper error when unsafe cast is detected by PyArrow
## What changes were proposed in this pull request?

Since 0.11.0, PyArrow supports to raise an error for unsafe cast ([PR](https://github.com/apache/arrow/pull/2504)). We should use it to raise a proper error for pandas udf users when such cast is detected.

Added a SQL config `spark.sql.execution.pandas.arrowSafeTypeConversion` to disable Arrow safe type check.

## How was this patch tested?

Added test and manually test.

Closes #22807 from viirya/SPARK-25811.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-22 14:54:41 +08:00
Wenchen Fan 098a2c41fc [SPARK-26520][SQL] data source v2 API refactor (micro-batch read)
## What changes were proposed in this pull request?

Following https://github.com/apache/spark/pull/23086, this PR does the API refactor for micro-batch read, w.r.t. the [doc](https://docs.google.com/document/d/1uUmKCpWLdh9vHxP7AWJ9EgbwB_U6T3EJYNjhISGmiQg/edit?usp=sharing)

The major changes:
1. rename `XXXMicroBatchReadSupport` to `XXXMicroBatchReadStream`
2. implement `TableProvider`, `Table`, `ScanBuilder` and `Scan` for streaming sources
3. at the beginning of micro-batch streaming execution, convert `StreamingRelationV2` to `StreamingDataSourceV2Relation` directly, instead of `StreamingExecutionRelation`.

followup:
support operator pushdown for stream sources

## How was this patch tested?

existing tests

Closes #23430 from cloud-fan/micro-batch.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-21 14:29:12 -08:00
Maxim Gekk 4c1cd809f8 [SPARK-26652][SQL] Remove fromJSON and fromString from Literal
## What changes were proposed in this pull request?

The `fromString` and `fromJSON` methods of the `Literal` object are removed because they are not used.

Closes #23596

Closes #23603 from MaxGekk/remove-literal-fromstring.

Authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-22 02:24:12 +08:00
liuxian ace2364296 [MINOR][TEST] Correct some unit test mistakes
## What changes were proposed in this pull request?

Correct some unit test mistakes.

## How was this patch tested?
N/A

Closes #23583 from 10110346/unused_symbol.

Authored-by: liuxian <liu.xian3@zte.com.cn>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-19 08:54:55 -06:00
Kazuaki Ishizaki 64cc9e572e
[SPARK-26477][CORE] Use ConfigEntry for hardcoded configs for unsafe category
## What changes were proposed in this pull request?

The PR makes hardcoded `spark.unsafe` configs to use ConfigEntry and put them in the `config` package.

## How was this patch tested?

Existing UTs

Closes #23412 from kiszk/SPARK-26477.

Authored-by: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-18 23:57:04 -08:00
Maxim Gekk 34db5f5652 [SPARK-26618][SQL] Make typed Timestamp/Date literals consistent to casting
## What changes were proposed in this pull request?

In the PR, I propose to make creation of typed Literals `TIMESTAMP` and `DATE` consistent to the `Cast` expression. More precisely, reusing the `Cast` expression in the type constructors. In this way, it allows:
- To use the same calendar in parsing methods
- To support the same set of timestamp/date patterns

For example, creating timestamp literal:
```sql
SELECT TIMESTAMP '2019-01-14 20:54:00.000'
```
behaves similarly as casting the string literal:
```sql
SELECT CAST('2019-01-14 20:54:00.000' AS TIMESTAMP)
```

## How was this patch tested?

This was tested by `SQLQueryTestSuite` as well as `ExpressionParserSuite`.

Closes #23541 from MaxGekk/timestamp-date-constructors.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-18 12:47:36 +01:00
Kris Mok e3418649dc [SPARK-26659][SQL] Fix duplicate cmd.nodeName in the explain output of DataWritingCommandExec
## What changes were proposed in this pull request?

`DataWritingCommandExec` generates `cmd.nodeName` twice in its explain output, e.g. when running this query `spark.sql("create table foo stored as parquet as select id, id % 10 as cat1, id % 20 as cat2 from range(10)")`,
```
Execute OptimizedCreateHiveTableAsSelectCommand OptimizedCreateHiveTableAsSelectCommand [Database:default, TableName: foo, InsertIntoHiveTable]
+- *(1) Project [id#2L, (id#2L % 10) AS cat1#0L, (id#2L % 20) AS cat2#1L]
   +- *(1) Range (0, 10, step=1, splits=8)
```
After the fix, it'll go back to normal:
```
Execute OptimizedCreateHiveTableAsSelectCommand [Database:default, TableName: foo, InsertIntoHiveTable]
+- *(1) Project [id#2L, (id#2L % 10) AS cat1#0L, (id#2L % 20) AS cat2#1L]
   +- *(1) Range (0, 10, step=1, splits=8)
```

This duplication is introduced when this specialized `DataWritingCommandExec` was created in place of `ExecutedCommandExec`.

The former is a `UnaryExecNode` whose `children` include the physical plan of the query, and the `cmd` is picked up via `TreeNode.stringArgs` into the argument string. The duplication comes from: `DataWritingCommandExec.nodeName` is `s"Execute ${cmd.nodeName}"` while the argument string is `cmd.simpleString()` which also includes `cmd.nodeName`.

The latter didn't have that problem because it's a `LeafExecNode` with no children, and it declares the `cmd` as being a part of the `innerChildren` which is excluded from the argument string.

## How was this patch tested?

Manual testing of running the example above in a local Spark Shell.
Also added a new test case in `ExplainSuite`.

Closes #23579 from rednaxelafx/fix-explain.

Authored-by: Kris Mok <kris.mok@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-17 22:43:39 -08:00
Sean Owen c2d0d700b5 [SPARK-26640][CORE][ML][SQL][STREAMING][PYSPARK] Code cleanup from lgtm.com analysis
## What changes were proposed in this pull request?

Misc code cleanup from lgtm.com analysis. See comments below for details.

## How was this patch tested?

Existing tests.

Closes #23571 from srowen/SPARK-26640.

Lead-authored-by: Sean Owen <sean.owen@databricks.com>
Co-authored-by: Hyukjin Kwon <gurwls223@apache.org>
Co-authored-by: Sean Owen <srowen@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-17 19:40:39 -06:00
Juliusz Sompolski ede35c88e0 [SPARK-26622][SQL] Revise SQL Metrics labels
## What changes were proposed in this pull request?

Try to make labels more obvious
"avg hash probe"	avg hash probe bucket iterations
"partition pruning time (ms)"	dynamic partition pruning time
"total number of files in the table"	file count
"number of files that would be returned by partition pruning alone"	file count after partition pruning
"total size of files in the table"	file size
"size of files that would be returned by partition pruning alone"	file size after partition pruning
"metadata time (ms)"	metadata time
"aggregate time"	time in aggregation build
"aggregate time"	time in aggregation build
"time to construct rdd bc"	time to build
"total time to remove rows"	time to remove
"total time to update rows"	time to update

Add proper metric type to some metrics:
"bytes of written output"	written output - createSizeMetric
"metadata time"	- createTimingMetric
"dataSize"	- createSizeMetric
"collectTime"	- createTimingMetric
"buildTime"	- createTimingMetric
"broadcastTIme"	- createTimingMetric

## How is this patch tested?

Existing tests.

Author: Stacy Kerkela <stacy.kerkeladatabricks.com>
Signed-off-by: Juliusz Sompolski <julekdatabricks.com>

Closes #23551 from juliuszsompolski/SPARK-26622.

Lead-authored-by: Juliusz Sompolski <julek@databricks.com>
Co-authored-by: Stacy Kerkela <stacy.kerkela@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-17 10:49:42 -08:00
liuxian 1b575ef5d1 [SPARK-26621][CORE] Use ConfigEntry for hardcoded configs for shuffle categories.
## What changes were proposed in this pull request?

The PR makes hardcoded `spark.shuffle` configs to use ConfigEntry and put them in the config package.

## How was this patch tested?
Existing unit tests

Closes #23550 from 10110346/ConfigEntry_shuffle.

Authored-by: liuxian <liu.xian3@zte.com.cn>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-17 12:29:17 -06:00
Maxim Gekk 6f8c0e5255 [SPARK-26593][SQL] Use Proleptic Gregorian calendar in casting UTF8String to Date/TimestampType
## What changes were proposed in this pull request?

In the PR, I propose to use *java.time* classes in `stringToDate` and `stringToTimestamp`. This switches the methods from the hybrid calendar (Gregorian+Julian) to Proleptic Gregorian calendar. And it should make the casting consistent to other Spark classes that converts textual representation of dates/timestamps to `DateType`/`TimestampType`.

## How was this patch tested?

The changes were tested by existing suites - `HashExpressionsSuite`, `CastSuite` and `DateTimeUtilsSuite`.

Closes #23512 from MaxGekk/utf8string-timestamp-parsing.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-17 17:53:00 +01:00
Gengliang Wang c0632cec04 [SPARK-23817][SQL] Create file source V2 framework and migrate ORC read path
## What changes were proposed in this pull request?
Create a framework for file source V2 based on data source V2 API.
As a good example for demonstrating the framework, this PR also migrate ORC source. This is because ORC file source supports both row scan and columnar scan, and the implementation is simpler comparing with Parquet.

Note: Currently only read path of V2 API is done, this framework and migration are only for the read path.
Supports the following scan:
- Scan ColumnarBatch
- Scan UnsafeRow
- Push down filters
- Push down required columns

Not supported( due to the limitation of data source V2 API):
- Stats metrics
- Catalog table
- Writes

## How was this patch tested?

Unit test

Closes #23383 from gengliangwang/latest_orcV2.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-17 23:33:29 +08:00
Jungtaek Lim (HeartSaVioR) 38f030725c [SPARK-26466][CORE] Use ConfigEntry for hardcoded configs for submit categories.
## What changes were proposed in this pull request?

The PR makes hardcoded configs below to use `ConfigEntry`.

* spark.kryo
* spark.kryoserializer
* spark.serializer
* spark.jars
* spark.files
* spark.submit
* spark.deploy
* spark.worker

This patch doesn't change configs which are not relevant to SparkConf (e.g. system properties).

## How was this patch tested?

Existing tests.

Closes #23532 from HeartSaVioR/SPARK-26466-v2.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-16 20:57:21 -06:00
Liang-Chi Hsieh 8f170787d2
[SPARK-26619][SQL] Prune the unused serializers from SerializeFromObject
## What changes were proposed in this pull request?

`SerializeFromObject` now keeps all serializer expressions for domain object even when only part of output attributes are used by top plan.

We should be able to prune unused serializers from `SerializeFromObject` in such case.

## How was this patch tested?

Added tests.

Closes #23562 from viirya/SPARK-26619.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: DB Tsai <d_tsai@apple.com>
2019-01-16 19:16:37 +00:00
Maxim Gekk 190814e82e [SPARK-26550][SQL] New built-in datasource - noop
## What changes were proposed in this pull request?

In the PR, I propose new built-in datasource with name `noop` which can be used in:
- benchmarking to avoid additional overhead of actions and unnecessary type conversions
- caching of datasets/dataframes
- producing other side effects as a consequence of row materialisations like uploading data to a IO caches.

## How was this patch tested?

Added a test to check that datasource rows are materialised.

Closes #23471 from MaxGekk/none-datasource.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-16 19:01:58 +01:00
Tathagata Das 06d5b173b6
[SPARK-26629][SS] Fixed error with multiple file stream in a query + restart on a batch that has no data for one file stream
## What changes were proposed in this pull request?
When a streaming query has multiple file streams, and there is a batch where one of the file streams dont have data in that batch, then if the query has to restart from that, it will throw the following error.
```
java.lang.IllegalStateException: batch 1 doesn't exist
	at org.apache.spark.sql.execution.streaming.HDFSMetadataLog$.verifyBatchIds(HDFSMetadataLog.scala:300)
	at org.apache.spark.sql.execution.streaming.FileStreamSourceLog.get(FileStreamSourceLog.scala:120)
	at org.apache.spark.sql.execution.streaming.FileStreamSource.getBatch(FileStreamSource.scala:181)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$org$apache$spark$sql$execution$streaming$MicroBatchExecution$$populateStartOffsets$2.apply(MicroBatchExecution.scala:294)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$org$apache$spark$sql$execution$streaming$MicroBatchExecution$$populateStartOffsets$2.apply(MicroBatchExecution.scala:291)
	at scala.collection.Iterator$class.foreach(Iterator.scala:891)
	at scala.collection.AbstractIterator.foreach(Iterator.scala:1334)
	at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
	at org.apache.spark.sql.execution.streaming.StreamProgress.foreach(StreamProgress.scala:25)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution.org$apache$spark$sql$execution$streaming$MicroBatchExecution$$populateStartOffsets(MicroBatchExecution.scala:291)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$runActivatedStream$1$$anonfun$apply$mcZ$sp$1.apply$mcV$sp(MicroBatchExecution.scala:178)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$runActivatedStream$1$$anonfun$apply$mcZ$sp$1.apply(MicroBatchExecution.scala:175)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$runActivatedStream$1$$anonfun$apply$mcZ$sp$1.apply(MicroBatchExecution.scala:175)
	at org.apache.spark.sql.execution.streaming.ProgressReporter$class.reportTimeTaken(ProgressReporter.scala:251)
	at org.apache.spark.sql.execution.streaming.StreamExecution.reportTimeTaken(StreamExecution.scala:61)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution$$anonfun$runActivatedStream$1.apply$mcZ$sp(MicroBatchExecution.scala:175)
	at org.apache.spark.sql.execution.streaming.ProcessingTimeExecutor.execute(TriggerExecutor.scala:56)
	at org.apache.spark.sql.execution.streaming.MicroBatchExecution.runActivatedStream(MicroBatchExecution.scala:169)
	at org.apache.spark.sql.execution.streaming.StreamExecution.org$apache$spark$sql$execution$streaming$StreamExecution$$runStream(StreamExecution.scala:295)
	at org.apache.spark.sql.execution.streaming.StreamExecution$$anon$1.run(StreamExecution.scala:205)
```

Existing `HDFSMetadata.verifyBatchIds` threw error whenever the `batchIds` list was empty. In the context of `FileStreamSource.getBatch` (where verify is called) and `FileStreamSourceLog` (subclass of `HDFSMetadata`), this is usually okay because, in a streaming query with one file stream, the `batchIds` can never be empty:
- A batch is planned only when the `FileStreamSourceLog` has seen new offset (that is, there are new data files).
- So `FileStreamSource.getBatch` will be called on X to Y where X will always be > Y. This calls internally`HDFSMetadata.verifyBatchIds (X+1, Y)` with X+1-Y ids.

For example.,`FileStreamSource.getBatch(4, 5)` will call `verify(batchIds = Seq(5), start = 5, end = 5)`. However, the invariant of X > Y is not true when there are two file stream sources, as a batch may be planned even when only one of the file streams has data. So one of the file stream may not have data, which can call `FileStreamSource.getBatch(X, X)` -> `verify(batchIds = Seq.empty, start = X+1, end = X)` -> failure.

Note that `FileStreamSource.getBatch(X, X)` gets called **only when restarting a query in a batch where a file source did not have data**. This is because in normal planning of batches, `MicroBatchExecution` avoids calling `FileStreamSource.getBatch(X, X)` when offset X has not changed. However, when restarting a stream at such a batch, `MicroBatchExecution.populateStartOffsets()` calls `FileStreamSource.getBatch(X, X)` (DataSource V1 hack to initialize the source with last known offsets) thus hitting this issue.

The minimum solution here is to skip verification when `FileStreamSource.getBatch(X, X)`.

## How was this patch tested?

(Please explain how this patch was tested. E.g. unit tests, integration tests, manual tests)
(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)

Please review http://spark.apache.org/contributing.html before opening a pull request.

Closes #23557 from tdas/SPARK-26629.

Authored-by: Tathagata Das <tathagata.das1565@gmail.com>
Signed-off-by: Shixiong Zhu <zsxwing@gmail.com>
2019-01-16 09:42:14 -08:00
Wenchen Fan 954ef96c49 [SPARK-25530][SQL] data source v2 API refactor (batch write)
## What changes were proposed in this pull request?

Adjust the batch write API to match the read API refactor after https://github.com/apache/spark/pull/23086

The doc with high-level ideas:
https://docs.google.com/document/d/1vI26UEuDpVuOjWw4WPoH2T6y8WAekwtI7qoowhOFnI4/edit?usp=sharing

Basically it renames `BatchWriteSupportProvider` to `SupportsBatchWrite`, and make it extend `Table`. Renames `WriteSupport` to `Write`. It also cleans up some code as batch API is completed.

This PR also removes the test from https://github.com/apache/spark/pull/22688 . Now data source must return a table for read/write.

A few notes about future changes:
1. We will create `SupportsStreamingWrite` later for streaming APIs
2. We will create `SupportsBatchReplaceWhere`, `SupportsBatchAppend`, etc. for the new end-user write APIs. I think streaming APIs would remain to use `OutputMode`, and new end-user write APIs will apply to batch only, at least in the near future.
3. We will remove `SaveMode` from data source API: https://issues.apache.org/jira/browse/SPARK-26356

## How was this patch tested?

existing tests

Closes #23208 from cloud-fan/refactor-batch.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-15 13:53:48 -08:00
Anton Okolnychyi b45ff02e77
[SPARK-26203][SQL][TEST] Benchmark performance of In and InSet expressions
## What changes were proposed in this pull request?

This PR contains benchmarks for `In` and `InSet` expressions. They cover literals of different data types and will help us to decide where to integrate the switch-based logic for bytes/shorts/ints.

As discussed in [PR-23171](https://github.com/apache/spark/pull/23171), one potential approach is to convert `In` to `InSet` if all elements are literals independently of data types and the number of elements. According to the results of this PR, we might want to keep the threshold for the number of elements. The if-else approach approach might be faster for some data types on a small number of elements (structs? arrays? small decimals?).

### byte / short / int / long

Unless the number of items is really big, `InSet` is slower than `In` because of autoboxing .

Interestingly, `In` scales worse on bytes/shorts than on ints/longs. For example, `InSet` starts to match the performance on around 50 bytes/shorts while this does not happen on the same number of ints/longs. This is a bit strange as shorts/bytes (e.g., `(byte) 1`, `(short) 2`) are represented as ints in the bytecode.

### float / double

Use cases on floats/doubles also suffer from autoboxing. Therefore, `In` outperforms `InSet` on 10 elements.

Similarly to shorts/bytes, `In` scales worse on floats/doubles than on ints/longs because the equality condition is more complicated (e.g., `java.lang.Float.isNaN(filter_valueArg_0) && java.lang.Float.isNaN(9.0F)) || filter_valueArg_0 == 9.0F`).

### decimal

The reason why we have separate benchmarks for small and large decimals is that Spark might use longs to represent decimals in some cases.

If this optimization happens, then `equals` will be nothing else as comparing longs. If this does not happen, Spark will create an instance of `scala.BigDecimal` and use it for comparisons. The latter is more expensive.

`Decimal$hashCode` will always use `scala.BigDecimal$hashCode` even if the number is small enough to fit into a long variable. As a consequence, we see that use cases on small decimals are faster with `In` as they are using long comparisons under the hood. Large decimal values are always faster with `InSet`.

### string

`UTF8String$equals` is not cheap. Therefore, `In` does not really outperform `InSet` as in previous use cases.

### timestamp / date

Under the hood, timestamp/date values will be represented as long/int values. So, `In` allows us to avoid autoboxing.

### array

Arrays are working as expected. `In` is faster on 5 elements while `InSet` is faster on 15 elements. The benchmarks are using `UnsafeArrayData`.

### struct

`InSet` is always faster than `In` for structs. These benchmarks use `GenericInternalRow`.

Closes #23291 from aokolnychyi/spark-26203.

Lead-authored-by: Anton Okolnychyi <aokolnychyi@apple.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-15 07:25:50 -07:00
Maxim Gekk 33b5039cd3 [SPARK-25935][SQL] Allow null rows for bad records from JSON/CSV parsers
## What changes were proposed in this pull request?

This PR reverts  #22938 per discussion in #23325

Closes #23325

Closes #23543 from MaxGekk/return-nulls-from-json-parser.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-15 13:02:55 +08:00
Maxim Gekk 115fecfd84 [SPARK-26456][SQL] Cast date/timestamp to string by Date/TimestampFormatter
## What changes were proposed in this pull request?

In the PR, I propose to switch on `TimestampFormatter`/`DateFormatter` in casting dates/timestamps to strings. The changes should make the date/timestamp casting consistent to JSON/CSV datasources and time-related functions like `to_date`, `to_unix_timestamp`/`from_unixtime`.

Local formatters are moved out from `DateTimeUtils` to where they are actually used. It allows to avoid re-creation of new formatter instance per-each call. Another reason is to have separate parser for `PartitioningUtils` because default parsing pattern cannot be used (expected optional section `[.S]`).

## How was this patch tested?

It was tested by `DateTimeUtilsSuite`, `CastSuite` and `JDBC*Suite`.

Closes #23391 from MaxGekk/thread-local-date-format.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-14 21:59:25 +08:00
John Zhuge 3f8007102a [SPARK-26576][SQL] Broadcast hint not applied to partitioned table
## What changes were proposed in this pull request?

Make sure broadcast hint is applied to partitioned tables.

## How was this patch tested?

- A new unit test in PruneFileSourcePartitionsSuite
- Unit test suites touched by SPARK-14581: JoinOptimizationSuite, FilterPushdownSuite, ColumnPruningSuite, and PruneFiltersSuite

Closes #23507 from jzhuge/SPARK-26576.

Closes #23530 from jzhuge/SPARK-26576-master.

Authored-by: John Zhuge <jzhuge@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-13 15:36:40 -08:00
maryannxue 985f966b9c [SPARK-26065][FOLLOW-UP][SQL] Revert hint behavior in join reordering
## What changes were proposed in this pull request?

This is to fix a bug in #23036 that would cause a join hint to be applied on node it is not supposed to after join reordering. For example,
```
  val join = df.join(df, "id")
  val broadcasted = join.hint("broadcast")
  val join2 = join.join(broadcasted, "id").join(broadcasted, "id")
```
There should only be 2 broadcast hints on `join2`, but after join reordering there would be 4. It is because the hint application in join reordering compares the attribute set for testing relation equivalency.
Moreover, it could still be problematic even if the child relations were used in testing relation equivalency, due to the potential exprId conflict in nested self-join.

As a result, this PR simply reverts the join reorder hint behavior change introduced in #23036, which means if a join hint is present, the join node itself will not participate in the join reordering, while the sub-joins within its children still can.

## How was this patch tested?

Added new tests

Closes #23524 from maryannxue/query-hint-followup-2.

Authored-by: maryannxue <maryannxue@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-13 15:30:45 -08:00
Bruce Robbins 09b05487b7 [SPARK-26450][SQL] Avoid rebuilding map of schema for every column in projection
## What changes were proposed in this pull request?

When creating some unsafe projections, Spark rebuilds the map of schema attributes once for each expression in the projection. Some file format readers create one unsafe projection per input file, others create one per task. ProjectExec also creates one unsafe projection per task. As a result, for wide queries on wide tables, Spark might build the map of schema attributes hundreds of thousands of times.

This PR changes two functions to reuse the same AttributeSeq instance when creating BoundReference objects for each expression in the projection. This avoids the repeated rebuilding of the map of schema attributes.

### Benchmarks

The time saved by this PR depends on size of the schema, size of the projection, number of input files (or number of file splits), number of tasks, and file format. I chose a couple of example cases.

In the following tests, I ran the query
```sql
select * from table where id1 = 1
```

Matching rows are about 0.2% of the table.

#### Orc table 6000 columns, 500K rows, 34 input files

baseline | pr | improvement
----|----|----
1.772306 min | 1.487267 min | 16.082943%

#### Orc table 6000 columns, 500K rows, *17* input files

baseline | pr | improvement
----|----|----
 1.656400 min | 1.423550 min | 14.057595%

#### Orc table 60 columns, 50M rows, 34 input files

baseline | pr | improvement
----|----|----
0.299878 min | 0.290339 min | 3.180926%

#### Parquet table 6000 columns, 500K rows, 34 input files

baseline | pr | improvement
----|----|----
1.478306 min | 1.373728 min | 7.074165%

Note: The parquet reader does not create an unsafe projection. However, the filter operation in the query causes the planner to add a ProjectExec, which does create an unsafe projection for each task. So these results have nothing to do with Parquet itself.

#### Parquet table 60 columns, 50M rows, 34 input files

baseline | pr | improvement
----|----|----
0.245006 min | 0.242200 min | 1.145099%

#### CSV table 6000 columns, 500K rows, 34 input files

baseline | pr | improvement
----|----|----
2.390117 min | 2.182778 min | 8.674844%

#### CSV table 60 columns, 50M rows, 34 input files

baseline | pr | improvement
----|----|----
1.520911 min | 1.510211 min | 0.703526%

## How was this patch tested?

SQL unit tests
Python core and SQL test

Closes #23392 from bersprockets/norebuild.

Authored-by: Bruce Robbins <bersprockets@gmail.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-13 23:54:19 +01:00
Maxim Gekk 4ff2b94a7c [SPARK-26503][CORE][DOC][FOLLOWUP] Get rid of spark.sql.legacy.timeParser.enabled
## What changes were proposed in this pull request?

The SQL config `spark.sql.legacy.timeParser.enabled` was removed by https://github.com/apache/spark/pull/23495. The PR cleans up the SQL migration guide and the comment for `UnixTimestamp`.

Closes #23529 from MaxGekk/get-rid-off-legacy-parser-followup.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-13 11:20:22 +08:00
Kengo Seki 3bd77aa9f6 [SPARK-26564] Fix wrong assertions and error messages for parameter checking
## What changes were proposed in this pull request?

If users set equivalent values to spark.network.timeout and spark.executor.heartbeatInterval, they get the following message:

```
java.lang.IllegalArgumentException: requirement failed: The value of spark.network.timeout=120s must be no less than the value of spark.executor.heartbeatInterval=120s.
```

But it's misleading since it can be read as they could be equal. So this PR replaces "no less than" with "greater than". Also, it fixes similar inconsistencies found in MLlib and SQL components.

## How was this patch tested?

Ran Spark with equivalent values for them manually and confirmed that the revised message was displayed.

Closes #23488 from sekikn/SPARK-26564.

Authored-by: Kengo Seki <sekikn@apache.org>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-12 14:53:33 -06:00
Oleksii Shkarupin 5b37092311
[SPARK-26538][SQL] Set default precision and scale for elements of postgres numeric array
## What changes were proposed in this pull request?

When determining CatalystType for postgres columns with type `numeric[]` set the type of array element to `DecimalType(38, 18)` instead of `DecimalType(0,0)`.

## How was this patch tested?

Tested with modified `org.apache.spark.sql.jdbc.JDBCSuite`.
Ran the `PostgresIntegrationSuite` manually.

Closes #23456 from a-shkarupin/postgres_numeric_array.

Lead-authored-by: Oleksii Shkarupin <a.shkarupin@gmail.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-12 11:06:39 -08:00
Dongjoon Hyun 3587a9a227
[SPARK-26607][SQL][TEST] Remove Spark 2.2.x testing from HiveExternalCatalogVersionsSuite
## What changes were proposed in this pull request?

The vote of final release of `branch-2.2` passed and the branch goes EOL. This PR removes Spark 2.2.x from the testing coverage.

## How was this patch tested?

Pass the Jenkins.

Closes #23526 from dongjoon-hyun/SPARK-26607.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-11 22:53:58 -08:00
Mukul Murthy ae382c94dd
[SPARK-26586][SS] Fix race condition that causes streams to run with unexpected confs
## What changes were proposed in this pull request?

Fix race condition where streams can have unexpected conf values.

New streaming queries should run with isolated SparkSessions so that they aren't affected by conf updates after they are started. In StreamExecution, the parent SparkSession is cloned and used to run each batch, but this cloning happens in a separate thread and may happen after DataStreamWriter.start() returns. If a stream is started and a conf key is set immediately after, the stream is likely to have the new value.

## How was this patch tested?

New unit test that fails prior to the production change and passes with it.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Closes #23513 from mukulmurthy/26586.

Authored-by: Mukul Murthy <mukul.murthy@gmail.com>
Signed-off-by: Shixiong Zhu <zsxwing@gmail.com>
2019-01-11 11:46:14 -08:00
Liang-Chi Hsieh 50ebf3a43b
[SPARK-26551][SQL] Fix schema pruning error when selecting one complex field and having is not null predicate on another one
## What changes were proposed in this pull request?

Schema pruning has errors when selecting one complex field and having is not null predicate on another one:

```scala
val query = sql("select * from contacts")
  .where("name.middle is not null")
  .select(
    "id",
    "name.first",
    "name.middle",
    "name.last"
  )
  .where("last = 'Jones'")
  .select(count("id"))
```

```
java.lang.IllegalArgumentException: middle does not exist. Available: last
[info]   at org.apache.spark.sql.types.StructType.$anonfun$fieldIndex$1(StructType.scala:303)
[info]   at scala.collection.immutable.Map$Map1.getOrElse(Map.scala:119)
[info]   at org.apache.spark.sql.types.StructType.fieldIndex(StructType.scala:302)
[info]   at org.apache.spark.sql.execution.ProjectionOverSchema.$anonfun$getProjection$6(ProjectionOverSchema.scala:58)
[info]   at scala.Option.map(Option.scala:163)
[info]   at org.apache.spark.sql.execution.ProjectionOverSchema.getProjection(ProjectionOverSchema.scala:56)
[info]   at org.apache.spark.sql.execution.ProjectionOverSchema.unapply(ProjectionOverSchema.scala:32)
[info]   at org.apache.spark.sql.execution.datasources.parquet.ParquetSchemaPruning$$anonfun$$nestedInanonfun$buildNewProjection$1$1.applyOrElse(Parque
tSchemaPruning.scala:153)
```

## How was this patch tested?

Added tests.

Closes #23474 from viirya/SPARK-26551.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: DB Tsai <d_tsai@apple.com>
2019-01-11 19:23:32 +00:00
Jungtaek Lim (HeartSaVioR) d9e4cf67c0 [SPARK-26482][CORE] Use ConfigEntry for hardcoded configs for ui categories
## What changes were proposed in this pull request?

The PR makes hardcoded configs below to use `ConfigEntry`.

* spark.ui
* spark.ssl
* spark.authenticate
* spark.master.rest
* spark.master.ui
* spark.metrics
* spark.admin
* spark.modify.acl

This patch doesn't change configs which are not relevant to SparkConf (e.g. system properties).

## How was this patch tested?

Existing tests.

Closes #23423 from HeartSaVioR/SPARK-26466.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-01-11 10:18:07 -08:00
Sean Owen 51a6ba0181 [SPARK-26503][CORE] Get rid of spark.sql.legacy.timeParser.enabled
## What changes were proposed in this pull request?

Per discussion in #23391 (comment) this proposes to just remove the old pre-Spark-3 time parsing behavior.

This is a rebase of https://github.com/apache/spark/pull/23411

## How was this patch tested?

Existing tests.

Closes #23495 from srowen/SPARK-26503.2.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-11 08:53:12 -06:00
Wenchen Fan 1f1d98c6fa [SPARK-26580][SQL] remove Scala 2.11 hack for Scala UDF
## What changes were proposed in this pull request?

In https://github.com/apache/spark/pull/22732 , we tried our best to keep the behavior of Scala UDF unchanged in Spark 2.4.

However, since Spark 3.0, Scala 2.12 is the default. The trick that was used to keep the behavior unchanged doesn't work with Scala 2.12.

This PR proposes to remove the Scala 2.11 hack, as it's not useful.

## How was this patch tested?

existing tests.

Closes #23498 from cloud-fan/udf.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-11 14:52:13 +08:00
Dongjoon Hyun 270916f8cd
[SPARK-26584][SQL] Remove spark.sql.orc.copyBatchToSpark internal conf
## What changes were proposed in this pull request?

This PR aims to remove internal ORC configuration to simplify the code path for Spark 3.0.0. This removes the configuration `spark.sql.orc.copyBatchToSpark` and related ORC codes including tests and benchmarks.

## How was this patch tested?

Pass the Jenkins with the reduced test coverage.

Closes #23503 from dongjoon-hyun/SPARK-26584.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-10 08:42:23 -08:00
Sean Owen 2f8a938805 [SPARK-26539][CORE] Remove spark.memory.useLegacyMode and StaticMemoryManager
## What changes were proposed in this pull request?

Remove spark.memory.useLegacyMode and StaticMemoryManager. Update tests that used the StaticMemoryManager to equivalent use of UnifiedMemoryManager.

## How was this patch tested?

Existing tests, with modifications to make them work with a different mem manager.

Closes #23457 from srowen/SPARK-26539.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-10 08:57:44 -06:00
Wenchen Fan 6955638eae [SPARK-26459][SQL] replace UpdateNullabilityInAttributeReferences with FixNullability
## What changes were proposed in this pull request?

This is a followup of https://github.com/apache/spark/pull/18576

The newly added rule `UpdateNullabilityInAttributeReferences` does the same thing the `FixNullability` does, we only need to keep one of them.

This PR removes `UpdateNullabilityInAttributeReferences`, and use `FixNullability` to replace it. Also rename it to `UpdateAttributeNullability`

## How was this patch tested?

existing tests

Closes #23390 from cloud-fan/nullable.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Takeshi Yamamuro <yamamuro@apache.org>
2019-01-10 20:15:25 +09:00
Maxim Gekk 73c7b126c6 [SPARK-26546][SQL] Caching of java.time.format.DateTimeFormatter
## What changes were proposed in this pull request?

Added a cache for  java.time.format.DateTimeFormatter instances with keys consist of pattern and locale. This should allow to avoid parsing of timestamp/date patterns each time when new instance of `TimestampFormatter`/`DateFormatter` is created.

## How was this patch tested?

By existing test suites `TimestampFormatterSuite`/`DateFormatterSuite` and `JsonFunctionsSuite`/`JsonSuite`.

Closes #23462 from MaxGekk/time-formatter-caching.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-10 10:32:20 +08:00
Jamison Bennett 1a47233f99 [SPARK-26493][SQL] Allow multiple spark.sql.extensions
## What changes were proposed in this pull request?

Allow multiple spark.sql.extensions to be specified in the
configuration.

## How was this patch tested?

New tests are added.

Closes #23398 from jamisonbennett/SPARK-26493.

Authored-by: Jamison Bennett <jamison.bennett@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-10 10:23:03 +08:00
maryannxue 2d01bccbd4 [SPARK-26065][FOLLOW-UP][SQL] Fix the Failure when having two Consecutive Hints
## What changes were proposed in this pull request?

This is to fix a bug in https://github.com/apache/spark/pull/23036, which would lead to an exception in case of two consecutive hints.

## How was this patch tested?

Added a new test.

Closes #23501 from maryannxue/query-hint-followup.

Authored-by: maryannxue <maryannxue@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-09 14:31:26 -08:00
Wenchen Fan e853afb416 [SPARK-26448][SQL] retain the difference between 0.0 and -0.0
## What changes were proposed in this pull request?

In https://github.com/apache/spark/pull/23043 , we introduced a behavior change: Spark users are not able to distinguish 0.0 and -0.0 anymore.

This PR proposes an alternative fix to the original bug, to retain the difference between 0.0 and -0.0 inside Spark.

The idea is, we can rewrite the window partition key, join key and grouping key during logical phase, to normalize the special floating numbers. Thus only operators care about special floating numbers need to pay the perf overhead, and end users can distinguish -0.0.

## How was this patch tested?

existing test

Closes #23388 from cloud-fan/minor.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-09 13:50:32 -08:00
Peter Toth 49c062b2e0
[SPARK-25484][SQL][TEST] Refactor ExternalAppendOnlyUnsafeRowArrayBenchmark
## What changes were proposed in this pull request?

Refactor ExternalAppendOnlyUnsafeRowArrayBenchmark to use main method.

## How was this patch tested?

Manually tested and regenerated results.
Please note that `spark.memory.debugFill` setting has a huge impact on this benchmark. Since it is set to true by default when running the benchmark from SBT, we need to disable it:
```
SPARK_GENERATE_BENCHMARK_FILES=1 build/sbt ";project sql;set javaOptions in Test += \"-Dspark.memory.debugFill=false\";test:runMain org.apache.spark.sql.execution.ExternalAppendOnlyUnsafeRowArrayBenchmark"
```

Closes #22617 from peter-toth/SPARK-25484.

Lead-authored-by: Peter Toth <peter.toth@gmail.com>
Co-authored-by: Peter Toth <ptoth@hortonworks.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-09 09:54:21 -08:00
Gengliang Wang 311f32f37f [SPARK-26571][SQL] Update Hive Serde mapping with canonical name of Parquet and Orc FileFormat
## What changes were proposed in this pull request?

Currently Spark table maintains Hive catalog storage format, so that Hive client can read it.  In `HiveSerDe.scala`, Spark uses a mapping from its data source to HiveSerde. The mapping is old, we need to update with latest canonical name of Parquet and Orc FileFormat.

Otherwise the following queries will result in wrong Serde value in Hive table(default value `org.apache.hadoop.mapred.SequenceFileInputFormat`), and Hive client will fail to read the output table:
```
df.write.format("org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat").saveAsTable(..)
```

```
df.write.format("org.apache.spark.sql.execution.datasources.orc.OrcFileFormat").saveAsTable(..)
```

This minor PR is to fix the mapping.

## How was this patch tested?

Unit test.

Closes #23491 from gengliangwang/fixHiveSerdeMap.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-09 10:18:33 +08:00
Marcelo Vanzin 2783e4c45f [SPARK-24522][UI] Create filter to apply HTTP security checks consistently.
Currently there is code scattered in a bunch of places to do different
things related to HTTP security, such as access control, setting
security-related headers, and filtering out bad content. This makes it
really easy to miss these things when writing new UI code.

This change creates a new filter that does all of those things, and
makes sure that all servlet handlers that are attached to the UI get
the new filter and any user-defined filters consistently. The extent
of the actual features should be the same as before.

The new filter is added at the end of the filter chain, because authentication
is done by custom filters and thus needs to happen first. This means that
custom filters see unfiltered HTTP requests - which is actually the current
behavior anyway.

As a side-effect of some of the code refactoring, handlers added after
the initial set also get wrapped with a GzipHandler, which didn't happen
before.

Tested with added unit tests and in a history server with SPNEGO auth
configured.

Closes #23302 from vanzin/SPARK-24522.

Authored-by: Marcelo Vanzin <vanzin@cloudera.com>
Signed-off-by: Imran Rashid <irashid@cloudera.com>
2019-01-08 11:25:33 -06:00
“attilapiros” c101182b10 [SPARK-26002][SQL] Fix day of year calculation for Julian calendar days
## What changes were proposed in this pull request?

Fixing leap year calculations for date operators (year/month/dayOfYear) where the Julian calendars are used (before 1582-10-04). In a Julian calendar every years which are multiples of 4 are leap years (there is no extra exception for years multiples of 100).

## How was this patch tested?

With a unit test ("SPARK-26002: correct day of year calculations for Julian calendar years") which focuses to these corner cases.

Manually:

```
scala> sql("select year('1500-01-01')").show()

+------------------------------+
|year(CAST(1500-01-01 AS DATE))|
+------------------------------+
|                          1500|
+------------------------------+

scala> sql("select dayOfYear('1100-01-01')").show()

+-----------------------------------+
|dayofyear(CAST(1100-01-01 AS DATE))|
+-----------------------------------+
|                                  1|
+-----------------------------------+
```

Closes #23000 from attilapiros/julianOffByDays.

Authored-by: “attilapiros” <piros.attila.zsolt@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-09 01:24:47 +08:00
Wenchen Fan 72a572ffd6 [SPARK-26323][SQL] Scala UDF should still check input types even if some inputs are of type Any
## What changes were proposed in this pull request?

For Scala UDF, when checking input nullability, we will skip inputs with type `Any`, and only check the inputs that provide nullability info.

We should do the same for checking input types.

## How was this patch tested?

new tests

Closes #23275 from cloud-fan/udf.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-08 22:44:33 +08:00
Yuming Wang 29a7d2da44 [SPARK-24196][SQL] Implement Spark's own GetSchemasOperation
## What changes were proposed in this pull request?

This PR fix SQL Client tools can't show DBs by implementing Spark's own `GetSchemasOperation`.

## How was this patch tested?
unit tests and manual tests
![image](https://user-images.githubusercontent.com/5399861/47782885-3dd5d400-dd3c-11e8-8586-59a8c15c7020.png)
![image](https://user-images.githubusercontent.com/5399861/47782899-4928ff80-dd3c-11e8-9d2d-ba9580ba4301.png)

Closes #22903 from wangyum/SPARK-24196.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-07 18:59:43 -08:00
Hyukjin Kwon 5102ccc4ab [SPARK-26339][SQL][FOLLOW-UP] Issue warning instead of throwing an exception for underscore files
## What changes were proposed in this pull request?

The PR https://github.com/apache/spark/pull/23446 happened to introduce a behaviour change - empty dataframes can't be read anymore from underscore files. It looks controversial to allow or disallow this case so this PR targets to fix to issue warning instead of throwing an exception to be more conservative.

**Before**

```scala
scala> spark.read.schema("a int").parquet("_tmp*").show()
org.apache.spark.sql.AnalysisException: All paths were ignored:
file:/.../_tmp
  file:/.../_tmp1;
  at org.apache.spark.sql.execution.datasources.DataSource.checkAndGlobPathIfNecessary(DataSource.scala:570)
  at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:360)
  at org.apache.spark.sql.DataFrameReader.loadV1Source(DataFrameReader.scala:231)
  at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:219)
  at org.apache.spark.sql.DataFrameReader.parquet(DataFrameReader.scala:651)
  at org.apache.spark.sql.DataFrameReader.parquet(DataFrameReader.scala:635)
  ... 49 elided

scala> spark.read.text("_tmp*").show()
org.apache.spark.sql.AnalysisException: All paths were ignored:
file:/.../_tmp
  file:/.../_tmp1;
  at org.apache.spark.sql.execution.datasources.DataSource.checkAndGlobPathIfNecessary(DataSource.scala:570)
  at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:360)
  at org.apache.spark.sql.DataFrameReader.loadV1Source(DataFrameReader.scala:231)
  at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:219)
  at org.apache.spark.sql.DataFrameReader.text(DataFrameReader.scala:723)
  at org.apache.spark.sql.DataFrameReader.text(DataFrameReader.scala:695)
  ... 49 elided
```

**After**

```scala
scala> spark.read.schema("a int").parquet("_tmp*").show()
19/01/07 15:14:43 WARN DataSource: All paths were ignored:
  file:/.../_tmp
  file:/.../_tmp1
+---+
|  a|
+---+
+---+

scala> spark.read.text("_tmp*").show()
19/01/07 15:14:51 WARN DataSource: All paths were ignored:
  file:/.../_tmp
  file:/.../_tmp1
+-----+
|value|
+-----+
+-----+
```

## How was this patch tested?

Manually tested as above.

Closes #23481 from HyukjinKwon/SPARK-26339.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-07 15:48:54 -08:00
Marco Gaido 1a641525e6 [SPARK-26491][CORE][TEST] Use ConfigEntry for hardcoded configs for test categories
## What changes were proposed in this pull request?

The PR makes hardcoded `spark.test` and `spark.testing` configs to use `ConfigEntry` and put them in the config package.

## How was this patch tested?

existing UTs

Closes #23413 from mgaido91/SPARK-26491.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-01-07 15:35:33 -08:00
maryannxue 98be8953c7 [SPARK-26065][SQL] Change query hint from a LogicalPlan to a field
## What changes were proposed in this pull request?

The existing query hint implementation relies on a logical plan node `ResolvedHint` to store query hints in logical plans, and on `Statistics` in physical plans. Since `ResolvedHint` is not really a logical operator and can break the pattern matching for existing and future optimization rules, it is a issue to the Optimizer as the old `AnalysisBarrier` was to the Analyzer.

Given the fact that all our query hints are either 1) a join hint, i.e., broadcast hint; or 2) a re-partition hint, which is indeed an operator, we only need to add a hint field on the Join plan and that will be a good enough solution for the current hint usage.

This PR is to let `Join` node have a hint for its left sub-tree and another hint for its right sub-tree and each hint is a merged result of all the effective hints specified in the corresponding sub-tree. The "effectiveness" of a hint, i.e., whether that hint should be propagated to the `Join` node, is currently consistent with the hint propagation rules originally implemented in the `Statistics` approach. Note that the `ResolvedHint` node still has to live through the analysis stage because of the `Dataset` interface, but it will be got rid of and moved to the `Join` node in the "pre-optimization" stage.

This PR also introduces a change in how hints work with join reordering. Before this PR, hints would stop join reordering. For example, in "a.join(b).join(c).hint("broadcast").join(d)", the broadcast hint would stop d from participating in the cost-based join reordering while still allowing reordering from under the hint node. After this PR, though, the broadcast hint will not interfere with join reordering at all, and after reordering if a relation associated with a hint stays unchanged or equivalent to the original relation, the hint will be retained, otherwise will be discarded. For example, the original plan is like "a.join(b).hint("broadcast").join(c).hint("broadcast").join(d)", thus the join order is "a JOIN b JOIN c JOIN d". So if after reordering the join order becomes "a JOIN b JOIN (c JOIN d)", the plan will be like "a.join(b).hint("broadcast").join(c.join(d))"; but if after reordering the join order becomes "a JOIN c JOIN b JOIN d", the plan will be like "a.join(c).join(b).hint("broadcast").join(d)".

## How was this patch tested?

Added new tests.

Closes #23036 from maryannxue/query-hint.

Authored-by: maryannxue <maryannxue@apache.org>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-07 13:59:40 -08:00
ayudovin 868e02533d [SPARK-26383][CORE] NPE when use DataFrameReader.jdbc with wrong URL
### What changes were proposed in this pull request?
When passing wrong url to jdbc then It would throw IllegalArgumentException instead of NPE.
### How was this patch tested?
Adding test case to Existing tests in JDBCSuite

Closes #23464 from ayudovin/fixing-npe.

Authored-by: ayudovin <a.yudovin6695@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-07 08:58:33 -06:00
Dongjoon Hyun 61133cb8a6
[SPARK-26536][BUILD][FOLLOWUP][TEST-MAVEN] Make StreamingReadSupport public for maven testing
## What changes were proposed in this pull request?

`StreamingReadSupport` is designed to be a `package` interface. Mockito seems to complain during `Maven` testing. This doesn't fail in `sbt` and IntelliJ. For mock-testing purpose, this PR makes it `public` interface and adds explicit comments like `public interface ReadSupport`

```scala
EpochCoordinatorSuite:
*** RUN ABORTED ***
  java.lang.IllegalAccessError: tried to
access class org.apache.spark.sql.sources.v2.reader.streaming.StreamingReadSupport
from class org.apache.spark.sql.sources.v2.reader.streaming.ContinuousReadSupport$MockitoMock$58628338
  at org.apache.spark.sql.sources.v2.reader.streaming.ContinuousReadSupport$MockitoMock$58628338.<clinit>(Unknown Source)
  at sun.reflect.GeneratedSerializationConstructorAccessor632.newInstance(Unknown Source)
  at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
  at org.objenesis.instantiator.sun.SunReflectionFactoryInstantiator.newInstance(SunReflectionFactoryInstantiator.java:48)
  at org.objenesis.ObjenesisBase.newInstance(ObjenesisBase.java:73)
  at org.mockito.internal.creation.instance.ObjenesisInstantiator.newInstance(ObjenesisInstantiator.java:19)
  at org.mockito.internal.creation.bytebuddy.SubclassByteBuddyMockMaker.createMock(SubclassByteBuddyMockMaker.java:47)
  at org.mockito.internal.creation.bytebuddy.ByteBuddyMockMaker.createMock(ByteBuddyMockMaker.java:25)
  at org.mockito.internal.util.MockUtil.createMock(MockUtil.java:35)
  at org.mockito.internal.MockitoCore.mock(MockitoCore.java:69)
```

## How was this patch tested?

Pass the Jenkins with Maven build

Closes #23463 from dongjoon-hyun/SPARK-26536-2.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-06 21:00:10 -08:00
Maxim Gekk b305d71625
[SPARK-26547][SQL] Remove duplicate toHiveString from HiveUtils
## What changes were proposed in this pull request?

The `toHiveString()` and `toHiveStructString` methods were removed from `HiveUtils` because they have been already implemented in `HiveResult`. One related test was moved to `HiveResultSuite`.

## How was this patch tested?

By tests from `hive-thriftserver`.

Closes #23466 from MaxGekk/dedup-hive-result-string.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-06 17:36:06 -08:00
Hirobe Keiichi 9d8e9b394b [SPARK-26339][SQL] Throws better exception when reading files that start with underscore
## What changes were proposed in this pull request?
My pull request #23288 was resolved and merged to master, but it turned out  later that my change breaks another regression test. Because we cannot reopen pull request, I create a new pull request here.
Commit 92934b4 is only change after pull request #23288.
`CheckFileExist` was avoided at 239cfa4 after discussing #23288 (comment).
But, that change turned out to be wrong because we should not check if argument checkFileExist is false.

Test 27e42c1de5/sql/core/src/test/scala/org/apache/spark/sql/SQLQuerySuite.scala (L2555)
failed when we avoided checkFileExist, but now successed after commit 92934b4 .

## How was this patch tested?
Both of below tests were passed.
```
testOnly org.apache.spark.sql.execution.datasources.csv.CSVSuite
testOnly org.apache.spark.sql.SQLQuerySuite
```

Closes #23446 from KeiichiHirobe/SPARK-26339.

Authored-by: Hirobe Keiichi <keiichi_hirobe@forcia.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-06 08:52:09 -06:00
Dave DeCaprio a17851cb95 [SPARK-26548][SQL] Don't hold CacheManager write lock while computing executedPlan
## What changes were proposed in this pull request?

Address SPARK-26548, in Spark 2.4.0, the CacheManager holds a write lock while computing the executedPlan for a cached logicalPlan.  In some cases with very large query plans this can be an expensive operation, taking minutes to run.  The entire cache is blocked during this time.  This PR changes that so the writeLock is only obtained after the executedPlan is generated, this reduces the time the lock is held to just the necessary time when the shared data structure is being updated.

gatorsmile and cloud-fan - You can committed patches in this area before.  This is a small incremental change.

## How was this patch tested?

Has been tested on a live system where the blocking was causing major issues and it is working well.
 CacheManager has no explicit unit test but is used in many places internally as part of the SharedState.

Closes #23469 from DaveDeCaprio/optimizer-unblocked.

Lead-authored-by: Dave DeCaprio <daved@alum.mit.edu>
Co-authored-by: David DeCaprio <daved@alum.mit.edu>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-05 19:20:35 -08:00
Kris Mok 4ab5b5b918 [SPARK-26545] Fix typo in EqualNullSafe's truth table comment
## What changes were proposed in this pull request?

The truth table comment in EqualNullSafe incorrectly marked FALSE results as UNKNOWN.

## How was this patch tested?

N/A

Closes #23461 from rednaxelafx/fix-typo.

Authored-by: Kris Mok <kris.mok@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-05 14:37:04 -08:00
Maxim Gekk 980e6bcd1c [SPARK-26246][SQL][FOLLOWUP] Inferring TimestampType from JSON
## What changes were proposed in this pull request?

Added new JSON option `inferTimestamp` (`true` by default) to control inferring of `TimestampType` from string values.

## How was this patch tested?

Add new UT to `JsonInferSchemaSuite`.

Closes #23455 from MaxGekk/json-infer-time-followup.

Authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-05 21:50:27 +08:00
Marco Gaido 1af1190bee
[SPARK-26078][SQL][FOLLOWUP] Remove useless import
## What changes were proposed in this pull request?

While backporting the patch to 2.4/2.3, I realized that the patch introduces unneeded imports (probably leftovers from intermediate changes). This PR removes the useless import.

## How was this patch tested?

NA

Closes #23451 from mgaido91/SPARK-26078_FOLLOWUP.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-05 01:14:58 -08:00
Dongjoon Hyun e15a319ccd
[SPARK-26536][BUILD][TEST] Upgrade Mockito to 2.23.4
## What changes were proposed in this pull request?

This PR upgrades Mockito from 1.10.19 to 2.23.4. The following changes are required.

- Replace `org.mockito.Matchers` with `org.mockito.ArgumentMatchers`
- Replace `anyObject` with `any`
- Replace `getArgumentAt` with `getArgument` and add type annotation.
- Use `isNull` matcher in case of `null` is invoked.
```scala
     saslHandler.channelInactive(null);
-    verify(handler).channelInactive(any(TransportClient.class));
+    verify(handler).channelInactive(isNull());
```

- Make and use `doReturn` wrapper to avoid [SI-4775](https://issues.scala-lang.org/browse/SI-4775)
```scala
private def doReturn(value: Any) = org.mockito.Mockito.doReturn(value, Seq.empty: _*)
```

## How was this patch tested?

Pass the Jenkins with the existing tests.

Closes #23452 from dongjoon-hyun/SPARK-26536.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2019-01-04 19:23:38 -08:00
Sean Owen 36440e6447 [SPARK-26306][TEST][BUILD] More memory to de-flake SorterSuite
## What changes were proposed in this pull request?

Increase test memory to avoid OOM in TimSort-related tests.

## How was this patch tested?

Existing tests.

Closes #23425 from srowen/SPARK-26306.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-04 15:35:23 -06:00
Liu,Linhong f65dc9593e [SPARK-26526][SQL][TEST] Fix invalid test case about non-deterministic expression
## What changes were proposed in this pull request?

Test case in SPARK-10316 is used to make sure non-deterministic `Filter` won't be pushed through `Project`
But in current code base this test case can't cover this purpose.
Change LogicalRDD to HadoopFsRelation can fix this issue.

## How was this patch tested?

Modified test pass.

Closes #23440 from LinhongLiu/fix-test.

Authored-by: Liu,Linhong <liulinhong@baidu.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-04 10:51:33 +08:00
Gengliang Wang e2dbafdbc5 [SPARK-26447][SQL] Allow OrcColumnarBatchReader to return less partition columns
## What changes were proposed in this pull request?

Currently OrcColumnarBatchReader returns all the partition column values in the batch read.
In data source V2, we can improve it by returning the required partition column values only.

This PR is part of https://github.com/apache/spark/pull/23383 . As cloud-fan suggested, create a new PR to make review easier.

Also, this PR doesn't improve `OrcFileFormat`, since in the method `buildReaderWithPartitionValues`, the `requiredSchema` filter out all the partition columns, so we can't know which partition column is required.

## How was this patch tested?

Unit test

Closes #23387 from gengliangwang/refactorOrcColumnarBatch.

Lead-authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Co-authored-by: Gengliang Wang <ltnwgl@gmail.com>
Co-authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-01-04 00:37:03 +08:00
Liang-Chi Hsieh 40711eef16 [SPARK-26517][SQL][TEST] Avoid duplicate test in ParquetSchemaPruningSuite
## What changes were proposed in this pull request?

`testExactCaseQueryPruning` and `testMixedCaseQueryPruning` don't need to set up `PARQUET_VECTORIZED_READER_ENABLED` config. Because `withMixedCaseData` will run against both Spark vectorized reader and Parquet-mr reader.

## How was this patch tested?

Existing test.

Closes #23427 from viirya/fix-parquet-schema-pruning-test.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-03 10:30:47 -06:00
Maxim Gekk 2a30deb85a [SPARK-26502][SQL] Move hiveResultString() from QueryExecution to HiveResult
## What changes were proposed in this pull request?

In the PR, I propose to move `hiveResultString()` out of `QueryExecution` and put it to a separate object.

Closes #23409 from MaxGekk/hive-result-string.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2019-01-03 11:27:40 +01:00
Hyukjin Kwon 56967b7e28 [SPARK-26403][SQL] Support pivoting using array column for pivot(column) API
## What changes were proposed in this pull request?

This PR fixes `pivot(Column)` can accepts `collection.mutable.WrappedArray`.

Note that we return `collection.mutable.WrappedArray` from `ArrayType`, and `Literal.apply` doesn't support this.

We can unwrap the array and use it for type dispatch.

```scala
val df = Seq(
  (2, Seq.empty[String]),
  (2, Seq("a", "x")),
  (3, Seq.empty[String]),
  (3, Seq("a", "x"))).toDF("x", "s")
df.groupBy("x").pivot("s").count().show()
```

Before:

```
Unsupported literal type class scala.collection.mutable.WrappedArray$ofRef WrappedArray()
java.lang.RuntimeException: Unsupported literal type class scala.collection.mutable.WrappedArray$ofRef WrappedArray()
	at org.apache.spark.sql.catalyst.expressions.Literal$.apply(literals.scala:80)
	at org.apache.spark.sql.RelationalGroupedDataset.$anonfun$pivot$2(RelationalGroupedDataset.scala:427)
	at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:237)
	at scala.collection.IndexedSeqOptimized.foreach(IndexedSeqOptimized.scala:36)
	at scala.collection.IndexedSeqOptimized.foreach$(IndexedSeqOptimized.scala:33)
	at scala.collection.mutable.WrappedArray.foreach(WrappedArray.scala:39)
	at scala.collection.TraversableLike.map(TraversableLike.scala:237)
	at scala.collection.TraversableLike.map$(TraversableLike.scala:230)
	at scala.collection.AbstractTraversable.map(Traversable.scala:108)
	at org.apache.spark.sql.RelationalGroupedDataset.pivot(RelationalGroupedDataset.scala:425)
	at org.apache.spark.sql.RelationalGroupedDataset.pivot(RelationalGroupedDataset.scala:406)
	at org.apache.spark.sql.RelationalGroupedDataset.pivot(RelationalGroupedDataset.scala:317)
	at org.apache.spark.sql.DataFramePivotSuite.$anonfun$new$1(DataFramePivotSuite.scala:341)
	at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
```

After:

```
+---+---+------+
|  x| []|[a, x]|
+---+---+------+
|  3|  1|     1|
|  2|  1|     1|
+---+---+------+
```

## How was this patch tested?

Manually tested and unittests were added.

Closes #23349 from HyukjinKwon/SPARK-26403.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-03 11:01:54 +08:00
Maxim Gekk 8be4d24a27 [SPARK-26023][SQL][FOLLOWUP] Dumping truncated plans and generated code to a file
## What changes were proposed in this pull request?

`DataSourceScanExec` overrides "wrong" `treeString` method without `append`. In the PR, I propose to make `treeString`s **final** to prevent such mistakes in the future. And removed the `treeString` and `verboseString` since they both use `simpleString` with reduction.

## How was this patch tested?

It was tested by `DataSourceScanExecRedactionSuite`

Closes #23431 from MaxGekk/datasource-scan-exec-followup.

Authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-02 16:57:10 -08:00
seancxmao d40654861b [SPARK-26277][SQL][TEST] WholeStageCodegen metrics should be tested with whole-stage codegen enabled
## What changes were proposed in this pull request?
In `org.apache.spark.sql.execution.metric.SQLMetricsSuite`, there's a test case named "WholeStageCodegen metrics". However, it is executed with whole-stage codegen disabled. This PR fixes this by enable whole-stage codegen for this test case.

## How was this patch tested?
Tested locally using exiting test cases.

Closes #23224 from seancxmao/codegen-metrics.

Authored-by: seancxmao <seancxmao@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-02 15:45:14 -06:00
Kazuaki Ishizaki 79b05481a2 [SPARK-26508][CORE][SQL] Address warning messages in Java reported at lgtm.com
## What changes were proposed in this pull request?

This PR addresses warning messages in Java files reported at [lgtm.com](https://lgtm.com).

[lgtm.com](https://lgtm.com) provides automated code review of Java/Python/JavaScript files for OSS projects. [Here](https://lgtm.com/projects/g/apache/spark/alerts/?mode=list&severity=warning) are warning messages regarding Apache Spark project.

This PR addresses the following warnings:

- Result of multiplication cast to wider type
- Implicit narrowing conversion in compound assignment
- Boxed variable is never null
- Useless null check

NOTE: `Potential input resource leak` looks false positive for now.

## How was this patch tested?

Existing UTs

Closes #23420 from kiszk/SPARK-26508.

Authored-by: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-01 22:37:28 -06:00
Hyukjin Kwon 39a0493387 [SPARK-26227][R] from_[csv|json] should accept schema_of_[csv|json] in R API
## What changes were proposed in this pull request?

**1. Document `from_csv(..., schema_of_csv(...))` support:**

```R
csv <- "Amsterdam,2018"
df <- sql(paste0("SELECT '", csv, "' as csv"))
head(select(df, from_csv(df$csv, schema_of_csv(csv))))
```

```
    from_csv(csv)
1 Amsterdam, 2018
```

**2. Allow `from_json(..., schema_of_json(...))`**

Before:

```R
df2 <- sql("SELECT named_struct('name', 'Bob') as people")
df2 <- mutate(df2, people_json = to_json(df2$people))
head(select(df2, from_json(df2$people_json, schema_of_json(head(df2)$people_json))))
```

```
Error in (function (classes, fdef, mtable)  :
  unable to find an inherited method for function ‘from_json’ for signature ‘"Column", "Column"’
```

After:

```R
df2 <- sql("SELECT named_struct('name', 'Bob') as people")
df2 <- mutate(df2, people_json = to_json(df2$people))
head(select(df2, from_json(df2$people_json, schema_of_json(head(df2)$people_json))))
```

```
  from_json(people_json)
1                    Bob
```

**3. (While I'm here) Allow `structType` as schema for `from_csv` support to match with `from_json`.**

Before:

```R
csv <- "Amsterdam,2018"
df <- sql(paste0("SELECT '", csv, "' as csv"))
head(select(df, from_csv(df$csv, structType("city STRING, year INT"))))
```

```
Error in (function (classes, fdef, mtable)  :
  unable to find an inherited method for function ‘from_csv’ for signature ‘"Column", "structType"’
```

After:

```R
csv <- "Amsterdam,2018"
df <- sql(paste0("SELECT '", csv, "' as csv"))
head(select(df, from_csv(df$csv, structType("city STRING, year INT"))))
```

```
    from_csv(csv)
1 Amsterdam, 2018
```

## How was this patch tested?

Manually tested and unittests were added.

Closes #23184 from HyukjinKwon/SPARK-26227-1.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-02 08:01:34 +08:00
Maxim Gekk 5da55873fa [SPARK-26374][TEST][SQL] Enable TimestampFormatter in HadoopFsRelationTest
## What changes were proposed in this pull request?

Default timestamp pattern defined in `JSONOptions` doesn't allow saving/loading timestamps with time zones of seconds precision. Because of that, the round trip test failed for timestamps before 1582. In the PR, I propose to extend zone offset section from `XXX` to `XXXXX` which should allow to save/load zone offsets like `-07:52:48`.

## How was this patch tested?

It was tested by `JsonHadoopFsRelationSuite` and `TimestampFormatterSuite`.

Closes #23417 from MaxGekk/hadoopfsrelationtest-new-formatter.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-02 07:59:32 +08:00
zhoukang 2bf4d97118 [SPARK-24544][SQL] Print actual failure cause when look up function failed
## What changes were proposed in this pull request?

When we operate as below:
`
0: jdbc:hive2://xxx/> create  function funnel_analysis as 'com.xxx.hive.extend.udf.UapFunnelAnalysis';
`

`
0: jdbc:hive2://xxx/> select funnel_analysis(1,",",1,'');
Error: org.apache.spark.sql.AnalysisException: Undefined function: 'funnel_analysis'. This function is neither a registered temporary function nor a permanent function registered in the database 'xxx'.; line 1 pos 7 (state=,code=0)
`

`
0: jdbc:hive2://xxx/> describe function funnel_analysis;
+-----------------------------------------------------------+--+
|                       function_desc                       |
+-----------------------------------------------------------+--+
| Function: xxx.funnel_analysis                            |
| Class: com.xxx.hive.extend.udf.UapFunnelAnalysis  |
| Usage: N/A.                                               |
+-----------------------------------------------------------+--+
`
We can see describe funtion will get right information,but when we actually use this funtion,we will get an undefined exception.
Which is really misleading,the real cause is below:
 `
No handler for Hive UDF 'com.xxx.xxx.hive.extend.udf.UapFunnelAnalysis': java.lang.IllegalStateException: Should not be called directly;
	at org.apache.hadoop.hive.ql.udf.generic.GenericUDTF.initialize(GenericUDTF.java:72)
	at org.apache.spark.sql.hive.HiveGenericUDTF.outputInspector$lzycompute(hiveUDFs.scala:204)
	at org.apache.spark.sql.hive.HiveGenericUDTF.outputInspector(hiveUDFs.scala:204)
	at org.apache.spark.sql.hive.HiveGenericUDTF.elementSchema$lzycompute(hiveUDFs.scala:212)
	at org.apache.spark.sql.hive.HiveGenericUDTF.elementSchema(hiveUDFs.scala:212)
`
This patch print the actual failure for quick debugging.
## How was this patch tested?
UT

Closes #21790 from caneGuy/zhoukang/print-warning1.

Authored-by: zhoukang <zhoukang199191@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-01 09:13:13 -06:00
Thomas D'Silva 5f0ddd2d6e [SPARK-26499][SQL] JdbcUtils.makeGetter does not handle ByteType
…Type

## What changes were proposed in this pull request?
Modifed JdbcUtils.makeGetter to handle ByteType.

## How was this patch tested?

Added a new test to JDBCSuite that maps ```TINYINT``` to ```ByteType```.

Closes #23400 from twdsilva/tiny_int_support.

Authored-by: Thomas D'Silva <tdsilva@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2019-01-01 14:11:14 +08:00
Hyukjin Kwon f7455618ce Revert "[SPARK-26339][SQL] Throws better exception when reading files that start with underscore"
This reverts commit c0b9db120d.
2019-01-01 09:29:28 +08:00
Herman van Hovell c0368363f8 [SPARK-26495][SQL] Simplify the SelectedField extractor.
## What changes were proposed in this pull request?
The current `SelectedField` extractor is somewhat complicated and it seems to be handling cases that should be handled automatically:

- `GetArrayItem(child: GetStructFieldObject())`
- `GetArrayStructFields(child: GetArrayStructFields())`
- `GetMap(value: GetStructFieldObject())`

This PR removes those cases and simplifies the extractor by passing down the data type instead of a field.

## How was this patch tested?
Existing tests.

Closes #23397 from hvanhovell/SPARK-26495.

Authored-by: Herman van Hovell <hvanhovell@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2018-12-31 17:46:06 +01:00
Hirobe Keiichi c0b9db120d [SPARK-26339][SQL] Throws better exception when reading files that start with underscore
## What changes were proposed in this pull request?
As the description in SPARK-26339, spark.read behavior is very confusing when reading files that start with underscore,  fix this by throwing exception which message is "Path does not exist".

## How was this patch tested?
manual tests.
Both of codes below throws exception which message is "Path does not exist".
```
spark.read.csv("/home/forcia/work/spark/_test.csv")
spark.read.schema("test STRING, number INT").csv("/home/forcia/work/spark/_test.csv")
```

Closes #23288 from KeiichiHirobe/SPARK-26339.

Authored-by: Hirobe Keiichi <keiichi_hirobe@forcia.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2018-12-31 10:15:14 -06:00
Maxim Gekk 89c92ccc20 [SPARK-26504][SQL] Rope-wise dumping of Spark plans
## What changes were proposed in this pull request?

Proposed new class `StringConcat` for converting a sequence of strings to string with one memory allocation in the `toString` method.  `StringConcat` replaces `StringBuilderWriter` in methods of dumping of Spark plans and codegen to strings.

All `Writer` arguments are replaced by `String => Unit` in methods related to Spark plans stringification.

## How was this patch tested?

It was tested by existing suites `QueryExecutionSuite`, `DebuggingSuite` as well as new tests for `StringConcat` in `StringUtilsSuite`.

Closes #23406 from MaxGekk/rope-plan.

Authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2018-12-31 16:39:46 +01:00
seancxmao 0996b7c95a [SPARK-23375][SQL][FOLLOWUP][TEST] Test Sort metrics while Sort is missing
## What changes were proposed in this pull request?
#20560/[SPARK-23375](https://issues.apache.org/jira/browse/SPARK-23375) introduced an optimizer rule to eliminate redundant Sort. For a test case named "Sort metrics" in `SQLMetricsSuite`, because range is already sorted, sort is removed by the `RemoveRedundantSorts`, which makes this test case meaningless.

This PR modifies the query for testing Sort metrics and checks Sort exists in the plan.

## How was this patch tested?
Modify the existing test case.

Closes #23258 from seancxmao/sort-metrics.

Authored-by: seancxmao <seancxmao@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2018-12-31 08:24:18 -06:00
Hyukjin Kwon e63243df8a
[SPARK-26496][SS][TEST] Avoid to use Random.nextString in StreamingInnerJoinSuite
## What changes were proposed in this pull request?

Similar with https://github.com/apache/spark/pull/21446. Looks random string is not quite safe as a directory name.

```scala
scala> val prefix = Random.nextString(10); val dir = new File("/tmp", "del_" + prefix + "-" + UUID.randomUUID.toString); dir.mkdirs()
prefix: String = 窽텘⒘駖ⵚ駢⡞Ρ닋੎
dir: java.io.File = /tmp/del_窽텘⒘駖ⵚ駢⡞Ρ닋੎-a3f99855-c429-47a0-a108-47bca6905745
res40: Boolean = false  // nope, didn't like this one
```

## How was this patch tested?

Unit test was added, and manually.

Closes #23405 from HyukjinKwon/SPARK-26496.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-12-29 12:11:45 -08:00
Dongjoon Hyun e0054b88a1
[SPARK-26424][SQL][FOLLOWUP] Fix DateFormatClass/UnixTime codegen
## What changes were proposed in this pull request?

This PR fixes the codegen bug introduced by #23358 .

- https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-maven-hadoop-2.7-ubuntu-scala-2.11/158/

```
Line 44, Column 93: A method named "apply" is not declared in any enclosing class
nor any supertype, nor through a static import
```

## How was this patch tested?

Manual. `DateExpressionsSuite` should be passed with Scala-2.11.

Closes #23394 from dongjoon-hyun/SPARK-26424.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-12-28 11:29:06 -08:00
Kevin Yu add287f397 [SPARK-25892][SQL] Change AttributeReference.withMetadata's return type to AttributeReference
## What changes were proposed in this pull request?

Currently the `AttributeReference.withMetadata` method have return type `Attribute`, the rest of with methods in the `AttributeReference` return type are `AttributeReference`, as the [spark-25892](https://issues.apache.org/jira/browse/SPARK-25892?jql=project%20%3D%20SPARK%20AND%20component%20in%20(ML%2C%20PySpark%2C%20SQL)) mentioned.
This PR will change `AttributeReference.withMetadata` method's return type from `Attribute` to `AttributeReference`.
## How was this patch tested?

Run all `sql/test,` `catalyst/test` and `org.apache.spark.sql.execution.streaming.*`

Closes #22918 from kevinyu98/spark-25892.

Authored-by: Kevin Yu <qyu@us.ibm.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-27 22:26:37 +08:00
Maxim Gekk a1c1dd3484 [SPARK-26191][SQL] Control truncation of Spark plans via maxFields parameter
## What changes were proposed in this pull request?

In the PR, I propose to add `maxFields` parameter to all functions involved in creation of textual representation of spark plans such as `simpleString` and `verboseString`. New parameter restricts number of fields converted to truncated strings. Any elements beyond the limit will be dropped and replaced by a `"... N more fields"` placeholder. The threshold is bumped up to `Int.MaxValue` for `toFile()`.

## How was this patch tested?

Added a test to `QueryExecutionSuite` which checks `maxFields` impacts on number of truncated fields in `LocalRelation`.

Closes #23159 from MaxGekk/to-file-max-fields.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Herman van Hovell <hvanhovell@databricks.com>
2018-12-27 11:13:16 +01:00
Liang-Chi Hsieh f89cdec8b9 [SPARK-26435][SQL] Support creating partitioned table using Hive CTAS by specifying partition column names
## What changes were proposed in this pull request?

Spark SQL doesn't support creating partitioned table using Hive CTAS in SQL syntax. However it is supported by using DataFrameWriter API.

```scala
val df = Seq(("a", 1)).toDF("part", "id")
df.write.format("hive").partitionBy("part").saveAsTable("t")
```
Hive begins to support this syntax in newer version: https://issues.apache.org/jira/browse/HIVE-20241:

```
CREATE TABLE t PARTITIONED BY (part) AS SELECT 1 as id, "a" as part
```

This patch adds this support to SQL syntax.

## How was this patch tested?

Added tests.

Closes #23376 from viirya/hive-ctas-partitioned-table.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-27 16:03:14 +08:00
Maxim Gekk 7c7fccfeb5 [SPARK-26424][SQL] Use java.time API in date/timestamp expressions
## What changes were proposed in this pull request?

In the PR, I propose to switch the `DateFormatClass`, `ToUnixTimestamp`, `FromUnixTime`, `UnixTime` on java.time API for parsing/formatting dates and timestamps. The API has been already implemented by the `Timestamp`/`DateFormatter` classes. One of benefit is those classes support parsing timestamps with microsecond precision. Old behaviour can be switched on via SQL config: `spark.sql.legacy.timeParser.enabled` (`false` by default).

## How was this patch tested?

It was tested by existing test suites - `DateFunctionsSuite`, `DateExpressionsSuite`, `JsonSuite`, `CsvSuite`, `SQLQueryTestSuite` as well as PySpark tests.

Closes #23358 from MaxGekk/new-time-cast.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-27 11:09:50 +08:00
wangyanlin01 827383a97c [SPARK-26426][SQL] fix ExpresionInfo assert error in windows operation system.
## What changes were proposed in this pull request?
fix ExpresionInfo assert error in windows operation system, when running unit tests.

## How was this patch tested?
unit tests

Closes #23363 from yanlin-Lynn/unit-test-windows.

Authored-by: wangyanlin01 <wangyanlin01@baidu.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-25 15:53:42 +08:00
Sean Owen 0523f5e378
[SPARK-14023][CORE][SQL] Don't reference 'field' in StructField errors for clarity in exceptions
## What changes were proposed in this pull request?

Variation of https://github.com/apache/spark/pull/20500
I cheated by not referencing fields or columns at all as this exception propagates in contexts where both would be applicable.

## How was this patch tested?

Existing tests

Closes #23373 from srowen/SPARK-14023.2.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-12-23 21:09:44 -08:00
Maxim Gekk 1008ab0801 [SPARK-26178][SPARK-26243][SQL][FOLLOWUP] Replacing SimpleDateFormat by DateTimeFormatter in comments
## What changes were proposed in this pull request?

The PRs #23150 and #23196 switched JSON and CSV datasources on new formatter for dates/timestamps which is based on `DateTimeFormatter`. In this PR, I replaced `SimpleDateFormat` by `DateTimeFormatter` to reflect the changes.

Closes #23374 from MaxGekk/java-time-docs.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-24 10:47:47 +08:00
DB Tsai a5a24d92bd
[SPARK-26402][SQL] Accessing nested fields with different cases in case insensitive mode
## What changes were proposed in this pull request?

GetStructField with different optional names should be semantically equal. We will use this as building block to compare the nested fields used in the plans to be optimized by catalyst optimizer.

This PR also fixes a bug below that accessing nested fields with different cases in case insensitive mode will result `AnalysisException`.

```
sql("create table t (s struct<i: Int>) using json")
sql("select s.I from t group by s.i")
```
which is currently failing
```
org.apache.spark.sql.AnalysisException: expression 'default.t.`s`' is neither present in the group by, nor is it an aggregate function
```
as cloud-fan pointed out.

## How was this patch tested?

New tests are added.

Closes #23353 from dbtsai/nestedEqual.

Lead-authored-by: DB Tsai <d_tsai@apple.com>
Co-authored-by: DB Tsai <dbtsai@dbtsai.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-12-22 10:35:14 -08:00
Jungtaek Lim 90a810352e [SPARK-25245][DOCS][SS] Explain regarding limiting modification on "spark.sql.shuffle.partitions" for structured streaming
## What changes were proposed in this pull request?

This patch adds explanation of `why "spark.sql.shuffle.partitions" keeps unchanged in structured streaming`, which couple of users already wondered and some of them even thought it as a bug.

This patch would help other end users to know about such behavior before they find by theirselves and being wondered.

## How was this patch tested?

No need to test because this is a simple addition on guide doc with markdown editor.

Closes #22238 from HeartSaVioR/SPARK-25245.

Lead-authored-by: Jungtaek Lim <kabhwan@gmail.com>
Co-authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2018-12-22 10:32:32 -06:00
Dongjoon Hyun ceff0c8450
[SPARK-26428][SS][TEST] Minimize deprecated ProcessingTime usage
## What changes were proposed in this pull request?

Use of `ProcessingTime` class was deprecated in favor of `Trigger.ProcessingTime` in Spark 2.2. And, [SPARK-21464](https://issues.apache.org/jira/browse/SPARK-21464) minimized it at 2.2.1. Recently, it grows again in test suites. This PR aims to clean up newly introduced deprecation warnings for Spark 3.0.

## How was this patch tested?

Pass the Jenkins with existing tests and manually check the warnings.

Closes #23367 from dongjoon-hyun/SPARK-26428.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-12-22 00:43:59 -08:00
Wenchen Fan bba506f8f4 [SPARK-26216][SQL][FOLLOWUP] use abstract class instead of trait for UserDefinedFunction
## What changes were proposed in this pull request?

A followup of https://github.com/apache/spark/pull/23178 , to keep binary compability by using abstract class.

## How was this patch tested?

Manual test. I created a simple app with Spark 2.4
```
object TryUDF {
  def main(args: Array[String]): Unit = {
    val spark = SparkSession.builder().appName("test").master("local[*]").getOrCreate()
    import spark.implicits._
    val f1 = udf((i: Int) => i + 1)
    println(f1.deterministic)
    spark.range(10).select(f1.asNonNullable().apply($"id")).show()
    spark.stop()
  }
}
```

When I run it with current master, it fails with
```
java.lang.IncompatibleClassChangeError: Found interface org.apache.spark.sql.expressions.UserDefinedFunction, but class was expected
```

When I run it with this PR, it works

Closes #23351 from cloud-fan/minor.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-22 10:16:27 +08:00
Hyukjin Kwon 305e9b5ad2 [SPARK-26422][R] Support to disable Hive support in SparkR even for Hadoop versions unsupported by Hive fork
## What changes were proposed in this pull request?

Currently,  even if I explicitly disable Hive support in SparkR session as below:

```r
sparkSession <- sparkR.session("local[4]", "SparkR", Sys.getenv("SPARK_HOME"),
                               enableHiveSupport = FALSE)
```

produces when the Hadoop version is not supported by our Hive fork:

```
java.lang.reflect.InvocationTargetException
...
Caused by: java.lang.IllegalArgumentException: Unrecognized Hadoop major version number: 3.1.1.3.1.0.0-78
	at org.apache.hadoop.hive.shims.ShimLoader.getMajorVersion(ShimLoader.java:174)
	at org.apache.hadoop.hive.shims.ShimLoader.loadShims(ShimLoader.java:139)
	at org.apache.hadoop.hive.shims.ShimLoader.getHadoopShims(ShimLoader.java:100)
	at org.apache.hadoop.hive.conf.HiveConf$ConfVars.<clinit>(HiveConf.java:368)
	... 43 more
Error in handleErrors(returnStatus, conn) :
  java.lang.ExceptionInInitializerError
	at org.apache.hadoop.hive.conf.HiveConf.<clinit>(HiveConf.java:105)
	at java.lang.Class.forName0(Native Method)
	at java.lang.Class.forName(Class.java:348)
	at org.apache.spark.util.Utils$.classForName(Utils.scala:193)
	at org.apache.spark.sql.SparkSession$.hiveClassesArePresent(SparkSession.scala:1116)
	at org.apache.spark.sql.api.r.SQLUtils$.getOrCreateSparkSession(SQLUtils.scala:52)
	at org.apache.spark.sql.api.r.SQLUtils.getOrCreateSparkSession(SQLUtils.scala)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
```

The root cause is that:

```
SparkSession.hiveClassesArePresent
```

check if the class is loadable or not to check if that's in classpath but `org.apache.hadoop.hive.conf.HiveConf` has a check for Hadoop version as static logic which is executed right away. This throws an `IllegalArgumentException` and that's not caught:

36edbac1c8/sql/core/src/main/scala/org/apache/spark/sql/SparkSession.scala (L1113-L1121)

So, currently, if users have a Hive built-in Spark with unsupported Hadoop version by our fork (namely 3+), there's no way to use SparkR even though it could work.

This PR just propose to change the order of bool comparison so that we can don't execute `SparkSession.hiveClassesArePresent` when:

  1. `enableHiveSupport` is explicitly disabled
  2. `spark.sql.catalogImplementation` is `in-memory`

so that we **only** check `SparkSession.hiveClassesArePresent` when Hive support is explicitly enabled by short circuiting.

## How was this patch tested?

It's difficult to write a test since we don't run tests against Hadoop 3 yet. See https://github.com/apache/spark/pull/21588. Manually tested.

Closes #23356 from HyukjinKwon/SPARK-26422.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-21 16:09:30 +08:00
liuxian 98ecda3e8e [MINOR][SQL] Locality does not need to be implemented
## What changes were proposed in this pull request?
`HadoopFileWholeTextReader` and  `HadoopFileLinesReader` will be eventually called in `FileSourceScanExec`.
In fact,  locality has been implemented in `FileScanRDD`,  even if we implement it in `HadoopFileWholeTextReader ` and  `HadoopFileLinesReader`,  it would be useless.
So I think these `TODO` can be removed.

## How was this patch tested?
N/A

Closes #23339 from 10110346/noneededtodo.

Authored-by: liuxian <liu.xian3@zte.com.cn>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-21 13:01:14 +08:00
Gengliang Wang 6692bacf3e [SPARK-26409][SQL][TESTS] SQLConf should be serializable in test sessions
## What changes were proposed in this pull request?

`SQLConf` is supposed to be serializable. However, currently it is not  serializable in `WithTestConf`. `WithTestConf` uses the method `overrideConfs` in closure, while the classes which implements it (`TestHiveSessionStateBuilder` and `TestSQLSessionStateBuilder`) are not serializable.

This PR is to use a local variable to fix it.

## How was this patch tested?

Add unit test.

Closes #23352 from gengliangwang/serializableSQLConf.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2018-12-20 10:05:56 -08:00
Marco Gaido 98c0ca7861 [SPARK-26308][SQL] Avoid cast of decimals for ScalaUDF
## What changes were proposed in this pull request?

Currently, when we infer the schema for scala/java decimals, we return as data type the `SYSTEM_DEFAULT` implementation, ie. the decimal type with precision 38 and scale 18. But this is not right, as we know nothing about the right precision and scale and these values can be not enough to store the data. This problem arises in particular with UDF, where we cast all the input of type `DecimalType` to a `DecimalType(38, 18)`: in case this is not enough, null is returned as input for the UDF.

The PR defines a custom handling for casting to the expected data types for ScalaUDF: the decimal precision and scale is picked from the input, so no casting to different and maybe wrong percision and scale happens.

## How was this patch tested?

added UTs

Closes #23308 from mgaido91/SPARK-26308.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-20 14:17:44 +08:00
李亮 04d8e3a33c [SPARK-26318][SQL] Deprecate Row.merge
## What changes were proposed in this pull request?
Deprecate Row.merge

## How was this patch tested?
N/A

Closes #23271 from KyleLi1985/master.

Authored-by: 李亮 <liang.li.work@outlook.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-20 13:22:12 +08:00
Liang-Chi Hsieh 5ad03607d1 [SPARK-25271][SQL] Hive ctas commands should use data source if it is convertible
## What changes were proposed in this pull request?

In Spark 2.3.0 and previous versions, Hive CTAS command will convert to use data source to write data into the table when the table is convertible. This behavior is controlled by the configs like HiveUtils.CONVERT_METASTORE_ORC and HiveUtils.CONVERT_METASTORE_PARQUET.

In 2.3.1, we drop this optimization by mistake in the PR [SPARK-22977](https://github.com/apache/spark/pull/20521/files#r217254430). Since that Hive CTAS command only uses Hive Serde to write data.

This patch adds this optimization back to Hive CTAS command. This patch adds OptimizedCreateHiveTableAsSelectCommand which uses data source to write data.

## How was this patch tested?

Added test.

Closes #22514 from viirya/SPARK-25271-2.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-20 10:47:24 +08:00
Takeshi Yamamuro 61c443acd2 [SPARK-26262][SQL] Runs SQLQueryTestSuite on mixed config sets: WHOLESTAGE_CODEGEN_ENABLED and CODEGEN_FACTORY_MODE
## What changes were proposed in this pull request?
For better test coverage, this pr proposed to use the 4 mixed config sets of `WHOLESTAGE_CODEGEN_ENABLED` and `CODEGEN_FACTORY_MODE`  when running `SQLQueryTestSuite`:
1. WHOLESTAGE_CODEGEN_ENABLED=true, CODEGEN_FACTORY_MODE=CODEGEN_ONLY
2. WHOLESTAGE_CODEGEN_ENABLED=false, CODEGEN_FACTORY_MODE=CODEGEN_ONLY
3. WHOLESTAGE_CODEGEN_ENABLED=true, CODEGEN_FACTORY_MODE=NO_CODEGEN
4. WHOLESTAGE_CODEGEN_ENABLED=false, CODEGEN_FACTORY_MODE=NO_CODEGEN

This pr also moved some existing tests into `ExplainSuite` because explain output results are different between codegen and interpreter modes.

## How was this patch tested?
Existing tests.

Closes #23213 from maropu/InterpreterModeTest.

Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-20 10:41:45 +08:00
Wenchen Fan 08f74ada36
[SPARK-26390][SQL] ColumnPruning rule should only do column pruning
## What changes were proposed in this pull request?

This is a small clean up.

By design catalyst rules should be orthogonal: each rule should have its own responsibility. However, the `ColumnPruning` rule does not only do column pruning, but also remove no-op project and window.

This PR updates the `RemoveRedundantProject` rule to remove no-op window as well, and clean up the `ColumnPruning` rule to only do column pruning.

## How was this patch tested?

existing tests

Closes #23343 from cloud-fan/column-pruning.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-12-19 09:41:30 -08:00
Marco Gaido 834b860979 [SPARK-26366][SQL] ReplaceExceptWithFilter should consider NULL as False
## What changes were proposed in this pull request?

In `ReplaceExceptWithFilter` we do not consider properly the case in which the condition returns NULL. Indeed, in that case, since negating NULL still returns NULL, so it is not true the assumption that negating the condition returns all the rows which didn't satisfy it, rows returning NULL may not be returned. This happens when constraints inferred by `InferFiltersFromConstraints` are not enough, as it happens with `OR` conditions.

The rule had also problems with non-deterministic conditions: in such a scenario, this rule would change the probability of the output.

The PR fixes these problem by:
 - returning False for the condition when it is Null (in this way we do return all the rows which didn't satisfy it);
 - avoiding any transformation when the condition is non-deterministic.

## How was this patch tested?

added UTs

Closes #23315 from mgaido91/SPARK-26366.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2018-12-18 23:21:52 -08:00
Maxim Gekk 3c0bb6bc45 [SPARK-26384][SQL] Propagate SQL configs for CSV schema inferring
## What changes were proposed in this pull request?

Currently, SQL configs are not propagated to executors while schema inferring in CSV datasource. For example, changing of `spark.sql.legacy.timeParser.enabled` does not impact on inferring timestamp types. In the PR, I propose to fix the issue by wrapping schema inferring action using `SQLExecution.withSQLConfPropagated`.

## How was this patch tested?

Added logging to `TimestampFormatter`:
```patch
-object TimestampFormatter {
+object TimestampFormatter extends Logging {
   def apply(format: String, timeZone: TimeZone, locale: Locale): TimestampFormatter = {
     if (SQLConf.get.legacyTimeParserEnabled) {
+      logError("LegacyFallbackTimestampFormatter is being used")
       new LegacyFallbackTimestampFormatter(format, timeZone, locale)
     } else {
+      logError("Iso8601TimestampFormatter is being used")
       new Iso8601TimestampFormatter(format, timeZone, locale)
     }
   }
```
and run the command in `spark-shell`:
```shell
$ ./bin/spark-shell --conf spark.sql.legacy.timeParser.enabled=true
```
```scala
scala> Seq("2010|10|10").toDF.repartition(1).write.mode("overwrite").text("/tmp/foo")
scala> spark.read.option("inferSchema", "true").option("header", "false").option("timestampFormat", "yyyy|MM|dd").csv("/tmp/foo").printSchema()
18/12/18 10:47:27 ERROR TimestampFormatter: LegacyFallbackTimestampFormatter is being used
root
 |-- _c0: timestamp (nullable = true)
```

Closes #23345 from MaxGekk/csv-schema-infer-propagate-configs.

Authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-19 00:01:53 +08:00
Hyukjin Kwon 218341c5db [SPARK-26081][SQL][FOLLOW-UP] Use foreach instead of misuse of map (for Unit)
## What changes were proposed in this pull request?

This PR proposes to use foreach instead of misuse of map (for Unit). This could cause some weird errors potentially and it's not a good practice anyway. See also SPARK-16694

## How was this patch tested?

N/A

Closes #23341 from HyukjinKwon/followup-SPARK-26081.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-18 20:52:02 +08:00
Maxim Gekk d72571e51d [SPARK-26246][SQL] Inferring TimestampType from JSON
## What changes were proposed in this pull request?

The `JsonInferSchema` class is extended to support `TimestampType` inferring from string fields in JSON input:
- If the `prefersDecimal` option is set to `true`, it tries to infer decimal type from the string field.
- If decimal type inference fails or `prefersDecimal` is disabled, `JsonInferSchema` tries to infer `TimestampType`.
- If timestamp type inference fails, `StringType` is returned as the inferred type.

## How was this patch tested?

Added new test suite - `JsonInferSchemaSuite` to check date and timestamp types inferring from JSON using `JsonInferSchema` directly. A few tests were added `JsonSuite` to check type merging and roundtrip tests. This changes was tested by `JsonSuite`, `JsonExpressionsSuite` and `JsonFunctionsSuite` as well.

Closes #23201 from MaxGekk/json-infer-time.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-18 13:50:55 +08:00
Li Jin 86100df54b [SPARK-24561][SQL][PYTHON] User-defined window aggregation functions with Pandas UDF (bounded window)
## What changes were proposed in this pull request?

This PR implements a new feature - window aggregation Pandas UDF for bounded window.

#### Doc:
https://docs.google.com/document/d/14EjeY5z4-NC27-SmIP9CsMPCANeTcvxN44a7SIJtZPc/edit#heading=h.c87w44wcj3wj

#### Example:
```
from pyspark.sql.functions import pandas_udf, PandasUDFType
from pyspark.sql.window import Window

df = spark.range(0, 10, 2).toDF('v')
w1 = Window.partitionBy().orderBy('v').rangeBetween(-2, 4)
w2 = Window.partitionBy().orderBy('v').rowsBetween(-2, 2)

pandas_udf('double', PandasUDFType.GROUPED_AGG)
def avg(v):
    return v.mean()

df.withColumn('v_mean', avg(df['v']).over(w1)).show()
# +---+------+
# |  v|v_mean|
# +---+------+
# |  0|   1.0|
# |  2|   2.0|
# |  4|   4.0|
# |  6|   6.0|
# |  8|   7.0|
# +---+------+

df.withColumn('v_mean', avg(df['v']).over(w2)).show()
# +---+------+
# |  v|v_mean|
# +---+------+
# |  0|   2.0|
# |  2|   3.0|
# |  4|   4.0|
# |  6|   5.0|
# |  8|   6.0|
# +---+------+

```

#### High level changes:

This PR modifies the existing WindowInPandasExec physical node to deal with unbounded (growing, shrinking and sliding) windows.

* `WindowInPandasExec` now share the same base class as `WindowExec` and share utility functions. See `WindowExecBase`
* `WindowFunctionFrame` now has two new functions `currentLowerBound` and `currentUpperBound` - to return the lower and upper window bound for the current output row. It is also modified to allow `AggregateProcessor` == null. Null aggregator processor is used for `WindowInPandasExec` where we don't have an aggregator and only uses lower and upper bound functions from `WindowFunctionFrame`
* The biggest change is in `WindowInPandasExec`, where it is modified to take `currentLowerBound` and `currentUpperBound` and write those values together with the input data to the python process for rolling window aggregation. See `WindowInPandasExec` for more details.

#### Discussion
In benchmarking, I found numpy variant of the rolling window UDF is much faster than the pandas version:

Spark SQL window function: 20s
Pandas variant: ~80s
Numpy variant: 10s
Numpy variant with numba: 4s

Allowing numpy variant of the vectorized UDFs is something I want to discuss because of the performance improvement, but doesn't have to be in this PR.

## How was this patch tested?

New tests

Closes #22305 from icexelloss/SPARK-24561-bounded-window-udf.

Authored-by: Li Jin <ice.xelloss@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-18 09:15:21 +08:00
Vaclav Kosar 81d377d772 [SPARK-24933][SS] Report numOutputRows in SinkProgress
## What changes were proposed in this pull request?

SinkProgress should report similar properties like SourceProgress as long as they are available for given Sink. Count of written rows is metric availble for all Sinks. Since relevant progress information is with respect to commited rows, ideal object to carry this info is WriterCommitMessage. For brevity the implementation will focus only on Sinks with API V2 and on Micro Batch mode. Implemention for Continuous mode will be provided at later date.

### Before
```
{"description":"org.apache.spark.sql.kafka010.KafkaSourceProvider3c0bd317"}
```

### After
```
{"description":"org.apache.spark.sql.kafka010.KafkaSourceProvider3c0bd317","numOutputRows":5000}
```

### This PR is related to:
- https://issues.apache.org/jira/browse/SPARK-24647
- https://issues.apache.org/jira/browse/SPARK-21313

## How was this patch tested?

Existing and new unit tests.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Closes #21919 from vackosar/feature/SPARK-24933-numOutputRows.

Lead-authored-by: Vaclav Kosar <admin@vaclavkosar.com>
Co-authored-by: Kosar, Vaclav: Functions Transformation <Vaclav.Kosar@barclayscapital.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2018-12-17 11:50:24 -08:00
Wenchen Fan 12640d674b [SPARK-26243][SQL][FOLLOWUP] fix code style issues in TimestampFormatter.scala
## What changes were proposed in this pull request?

1. rename `FormatterUtils` to `DateTimeFormatterHelper`, and move it to a separated file
2. move `DateFormatter` and its implementation to a separated file
3. mark some methods as private
4. add `override` to some methods

## How was this patch tested?

existing tests

Closes #23329 from cloud-fan/minor.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-17 21:47:38 +08:00
gatorsmile f6888f7c94 [SPARK-20636] Add the rule TransposeWindow to the optimization batch
## What changes were proposed in this pull request?

This PR is a follow-up of the PR https://github.com/apache/spark/pull/17899. It is to add the rule TransposeWindow the optimizer batch.

## How was this patch tested?
The existing tests.

Closes #23222 from gatorsmile/followupSPARK-20636.

Authored-by: gatorsmile <gatorsmile@gmail.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2018-12-17 00:13:51 -08:00
gatorsmile 5960a8297c [SPARK-26327][SQL][FOLLOW-UP] Refactor the code and restore the metrics name
## What changes were proposed in this pull request?

- The original comment about `updateDriverMetrics` is not right.
- Refactor the code to ensure `selectedPartitions `  has been set before sending the driver-side metrics.
- Restore the original name, which is more general and extendable.

## How was this patch tested?
The existing tests.

Closes #23328 from gatorsmile/followupSpark-26142.

Authored-by: gatorsmile <gatorsmile@gmail.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2018-12-16 23:40:06 -08:00
Kris Mok 56448c6623 [SPARK-26352][SQL] join reorder should not change the order of output attributes
## What changes were proposed in this pull request?

The optimizer rule `org.apache.spark.sql.catalyst.optimizer.ReorderJoin` performs join reordering on inner joins. This was introduced from SPARK-12032 (https://github.com/apache/spark/pull/10073) in 2015-12.

After it had reordered the joins, though, it didn't check whether or not the output attribute order is still the same as before. Thus, it's possible to have a mismatch between the reordered output attributes order vs the schema that a DataFrame thinks it has.
The same problem exists in the CBO version of join reordering (`CostBasedJoinReorder`) too.

This can be demonstrated with the example:
```scala
spark.sql("create table table_a (x int, y int) using parquet")
spark.sql("create table table_b (i int, j int) using parquet")
spark.sql("create table table_c (a int, b int) using parquet")
val df = spark.sql("""
  with df1 as (select * from table_a cross join table_b)
  select * from df1 join table_c on a = x and b = i
""")
```
here's what the DataFrame thinks:
```
scala> df.printSchema
root
 |-- x: integer (nullable = true)
 |-- y: integer (nullable = true)
 |-- i: integer (nullable = true)
 |-- j: integer (nullable = true)
 |-- a: integer (nullable = true)
 |-- b: integer (nullable = true)
```
here's what the optimized plan thinks, after join reordering:
```
scala> df.queryExecution.optimizedPlan.output.foreach(a => println(s"|-- ${a.name}: ${a.dataType.typeName}"))
|-- x: integer
|-- y: integer
|-- a: integer
|-- b: integer
|-- i: integer
|-- j: integer
```

If we exclude the `ReorderJoin` rule (using Spark 2.4's optimizer rule exclusion feature), it's back to normal:
```
scala> spark.conf.set("spark.sql.optimizer.excludedRules", "org.apache.spark.sql.catalyst.optimizer.ReorderJoin")

scala> val df = spark.sql("with df1 as (select * from table_a cross join table_b) select * from df1 join table_c on a = x and b = i")
df: org.apache.spark.sql.DataFrame = [x: int, y: int ... 4 more fields]

scala> df.queryExecution.optimizedPlan.output.foreach(a => println(s"|-- ${a.name}: ${a.dataType.typeName}"))
|-- x: integer
|-- y: integer
|-- i: integer
|-- j: integer
|-- a: integer
|-- b: integer
```

Note that this output attribute ordering problem leads to data corruption, and can manifest itself in various symptoms:
* Silently corrupting data, if the reordered columns happen to either have matching types or have sufficiently-compatible types (e.g. all fixed length primitive types are considered as "sufficiently compatible" in an `UnsafeRow`), then only the resulting data is going to be wrong but it might not trigger any alarms immediately. Or
* Weird Java-level exceptions like `java.lang.NegativeArraySizeException`, or even SIGSEGVs.

## How was this patch tested?

Added new unit test in `JoinReorderSuite` and new end-to-end test in `JoinSuite`.
Also made `JoinReorderSuite` and `StarJoinReorderSuite` assert more strongly on maintaining output attribute order.

Closes #23303 from rednaxelafx/fix-join-reorder.

Authored-by: Kris Mok <rednaxelafx@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-17 13:41:20 +08:00
Hyukjin Kwon db1c5b1839 Revert "[SPARK-26248][SQL] Infer date type from CSV"
This reverts commit 5217f7b226.
2018-12-17 11:53:14 +08:00
Maxim Gekk 5217f7b226 [SPARK-26248][SQL] Infer date type from CSV
## What changes were proposed in this pull request?

The `CSVInferSchema` class is extended to support inferring of `DateType` from CSV input. The attempt to infer `DateType` is performed after inferring `TimestampType`.

## How was this patch tested?

Added new test for inferring date types from CSV . It was also tested by existing suites like `CSVInferSchemaSuite`, `CsvExpressionsSuite`, `CsvFunctionsSuite` and `CsvSuite`.

Closes #23202 from MaxGekk/csv-date-inferring.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-17 08:24:51 +08:00
Bruce Robbins e3e33d8794 [SPARK-26372][SQL] Don't reuse value from previous row when parsing bad CSV input field
## What changes were proposed in this pull request?

CSV parsing accidentally uses the previous good value for a bad input field. See example in Jira.

This PR ensures that the associated column is set to null when an input field cannot be converted.

## How was this patch tested?

Added new test.
Ran all SQL unit tests (testOnly org.apache.spark.sql.*).
Ran pyspark tests for pyspark-sql

Closes #23323 from bersprockets/csv-bad-field.

Authored-by: Bruce Robbins <bersprockets@gmail.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-16 11:02:00 +08:00
Marco Gaido cd815ae6c5 [SPARK-26078][SQL] Dedup self-join attributes on IN subqueries
## What changes were proposed in this pull request?

When there is a self-join as result of a IN subquery, the join condition may be invalid, resulting in trivially true predicates and return wrong results.

The PR deduplicates the subquery output in order to avoid the issue.

## How was this patch tested?

added UT

Closes #23057 from mgaido91/SPARK-26078.

Authored-by: Marco Gaido <marcogaido91@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-16 10:57:11 +08:00
Maxim Gekk 8a27952cdb [SPARK-26243][SQL] Use java.time API for parsing timestamps and dates from JSON
## What changes were proposed in this pull request?

In the PR, I propose to switch on **java.time API** for parsing timestamps and dates from JSON inputs with microseconds precision. The SQL config `spark.sql.legacy.timeParser.enabled` allow to switch back to previous behavior with using `java.text.SimpleDateFormat`/`FastDateFormat` for parsing/generating timestamps/dates.

## How was this patch tested?

It was tested by `JsonExpressionsSuite`, `JsonFunctionsSuite` and `JsonSuite`.

Closes #23196 from MaxGekk/json-time-parser.

Lead-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Co-authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-16 09:32:13 +08:00
Hyukjin Kwon 9ccae0c9e7 [SPARK-26362][CORE] Remove 'spark.driver.allowMultipleContexts' to disallow multiple creation of SparkContexts
## What changes were proposed in this pull request?

Multiple SparkContexts are discouraged and it has been warning for last 4 years, see SPARK-4180. It could cause arbitrary and mysterious error cases, see SPARK-2243.

Honestly, I didn't even know Spark still allows it, which looks never officially supported, see SPARK-2243.

I believe It should be good timing now to remove this configuration.

## How was this patch tested?

Each doc was manually checked and manually tested:

```
$ ./bin/spark-shell --conf=spark.driver.allowMultipleContexts=true
...
scala> new SparkContext()
org.apache.spark.SparkException: Only one SparkContext should be running in this JVM (see SPARK-2243).The currently running SparkContext was created at:
org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:939)
...
org.apache.spark.SparkContext$.$anonfun$assertNoOtherContextIsRunning$2(SparkContext.scala:2435)
  at scala.Option.foreach(Option.scala:274)
  at org.apache.spark.SparkContext$.assertNoOtherContextIsRunning(SparkContext.scala:2432)
  at org.apache.spark.SparkContext$.markPartiallyConstructed(SparkContext.scala:2509)
  at org.apache.spark.SparkContext.<init>(SparkContext.scala:80)
  at org.apache.spark.SparkContext.<init>(SparkContext.scala:112)
  ... 49 elided
```

Closes #23311 from HyukjinKwon/SPARK-26362.

Authored-by: Hyukjin Kwon <gurwls223@apache.org>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-15 13:55:24 +08:00
CarolinPeng d25e443eec [MINOR][SQL] Some errors in the notes.
## What changes were proposed in this pull request?

When using ordinals to access linked list, the time cost is O(n).

## How was this patch tested?

Existing tests.

Closes #23280 from CarolinePeng/update_Two.

Authored-by: CarolinPeng <00244106@zte.intra>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2018-12-14 14:23:21 -06:00
Takuya UESHIN 3dda58af2b [SPARK-26370][SQL] Fix resolution of higher-order function for the same identifier.
## What changes were proposed in this pull request?

When using a higher-order function with the same variable name as the existing columns in `Filter` or something which uses `Analyzer.resolveExpressionBottomUp` during the resolution, e.g.,:

```scala
val df = Seq(
  (Seq(1, 9, 8, 7), 1, 2),
  (Seq(5, 9, 7), 2, 2),
  (Seq.empty, 3, 2),
  (null, 4, 2)
).toDF("i", "x", "d")

checkAnswer(df.filter("exists(i, x -> x % d == 0)"),
  Seq(Row(Seq(1, 9, 8, 7), 1, 2)))
checkAnswer(df.select("x").filter("exists(i, x -> x % d == 0)"),
  Seq(Row(1)))
```

the following exception happens:

```
java.lang.ClassCastException: org.apache.spark.sql.catalyst.expressions.BoundReference cannot be cast to org.apache.spark.sql.catalyst.expressions.NamedExpression
  at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:237)
  at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
  at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
  at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
  at scala.collection.TraversableLike.map(TraversableLike.scala:237)
  at scala.collection.TraversableLike.map$(TraversableLike.scala:230)
  at scala.collection.AbstractTraversable.map(Traversable.scala:108)
  at org.apache.spark.sql.catalyst.expressions.HigherOrderFunction.$anonfun$functionsForEval$1(higherOrderFunctions.scala:147)
  at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:237)
  at scala.collection.immutable.List.foreach(List.scala:392)
  at scala.collection.TraversableLike.map(TraversableLike.scala:237)
  at scala.collection.TraversableLike.map$(TraversableLike.scala:230)
  at scala.collection.immutable.List.map(List.scala:298)
  at org.apache.spark.sql.catalyst.expressions.HigherOrderFunction.functionsForEval(higherOrderFunctions.scala:145)
  at org.apache.spark.sql.catalyst.expressions.HigherOrderFunction.functionsForEval$(higherOrderFunctions.scala:145)
  at org.apache.spark.sql.catalyst.expressions.ArrayExists.functionsForEval$lzycompute(higherOrderFunctions.scala:369)
  at org.apache.spark.sql.catalyst.expressions.ArrayExists.functionsForEval(higherOrderFunctions.scala:369)
  at org.apache.spark.sql.catalyst.expressions.SimpleHigherOrderFunction.functionForEval(higherOrderFunctions.scala:176)
  at org.apache.spark.sql.catalyst.expressions.SimpleHigherOrderFunction.functionForEval$(higherOrderFunctions.scala:176)
  at org.apache.spark.sql.catalyst.expressions.ArrayExists.functionForEval(higherOrderFunctions.scala:369)
  at org.apache.spark.sql.catalyst.expressions.ArrayExists.nullSafeEval(higherOrderFunctions.scala:387)
  at org.apache.spark.sql.catalyst.expressions.SimpleHigherOrderFunction.eval(higherOrderFunctions.scala:190)
  at org.apache.spark.sql.catalyst.expressions.SimpleHigherOrderFunction.eval$(higherOrderFunctions.scala:185)
  at org.apache.spark.sql.catalyst.expressions.ArrayExists.eval(higherOrderFunctions.scala:369)
  at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificPredicate.eval(Unknown Source)
  at org.apache.spark.sql.execution.FilterExec.$anonfun$doExecute$3(basicPhysicalOperators.scala:216)
  at org.apache.spark.sql.execution.FilterExec.$anonfun$doExecute$3$adapted(basicPhysicalOperators.scala:215)

...
```

because the `UnresolvedAttribute`s in `LambdaFunction` are unexpectedly resolved by the rule.

This pr modified to use a placeholder `UnresolvedNamedLambdaVariable` to prevent unexpected resolution.

## How was this patch tested?

Added a test and modified some tests.

Closes #23320 from ueshin/issues/SPARK-26370/hof_resolution.

Authored-by: Takuya UESHIN <ueshin@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-15 00:23:28 +08:00
Reynold Xin 2d8838dccd [SPARK-26368][SQL] Make it clear that getOrInferFileFormatSchema doesn't create InMemoryFileIndex
## What changes were proposed in this pull request?
I was looking at the code and it was a bit difficult to see the life cycle of InMemoryFileIndex passed into getOrInferFileFormatSchema, because once it is passed in, and another time it was created in getOrInferFileFormatSchema. It'd be easier to understand the life cycle if we move the creation of it out.

## How was this patch tested?
This is a simple code move and should be covered by existing tests.

Closes #23317 from rxin/SPARK-26368.

Authored-by: Reynold Xin <rxin@databricks.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2018-12-13 20:55:12 -08:00
Liang-Chi Hsieh 93139afb07 [SPARK-26337][SQL][TEST] Add benchmark for LongToUnsafeRowMap
## What changes were proposed in this pull request?

Regarding the performance issue of SPARK-26155, it reports the issue on TPC-DS. I think it is better to add a benchmark for `LongToUnsafeRowMap` which is the root cause of performance regression.

It can be easier to show performance difference between different metric implementations in `LongToUnsafeRowMap`.

## How was this patch tested?

Manually run added benchmark.

Closes #23284 from viirya/SPARK-26337.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-14 10:50:48 +08:00
Gabor Somogyi 362e472831 [SPARK-23886][SS] Update query status for ContinuousExecution
## What changes were proposed in this pull request?

Added query status updates to ContinuousExecution.

## How was this patch tested?

Existing unit tests + added ContinuousQueryStatusAndProgressSuite.

Closes #23095 from gaborgsomogyi/SPARK-23886.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2018-12-13 16:12:55 -08:00
Wenchen Fan 6c1f7ba8f6 [SPARK-26313][SQL] move newScanBuilder from Table to read related mix-in traits
## What changes were proposed in this pull request?

As discussed in https://github.com/apache/spark/pull/23208/files#r239684490 , we should put `newScanBuilder` in read related mix-in traits like `SupportsBatchRead`, to support write-only table.

In the `Append` operator, we should skip schema validation if not necessary. In the future we would introduce a capability API, so that data source can tell Spark that it doesn't want to do validation.

## How was this patch tested?

existing tests.

Closes #23266 from cloud-fan/ds-read.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-13 23:03:26 +08:00
seancxmao f372609216 [MINOR][DOC] Fix comments of ConvertToLocalRelation rule
## What changes were proposed in this pull request?
There are some comments issues left when `ConvertToLocalRelation` rule was added (see #22205/[SPARK-25212](https://issues.apache.org/jira/browse/SPARK-25212)). This PR fixes those comments issues.

## How was this patch tested?
N/A

Closes #23273 from seancxmao/ConvertToLocalRelation-doc.

Authored-by: seancxmao <seancxmao@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2018-12-13 07:40:13 -06:00
Wenchen Fan 3238e3d1c0 [SPARK-26348][SQL][TEST] make sure expression is resolved during test
## What changes were proposed in this pull request?

cleanup some tests to make sure expression is resolved during test.

## How was this patch tested?

test-only PR

Closes #23297 from cloud-fan/test.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-13 12:50:15 +08:00
Wenchen Fan 05b68d5cc9 [SPARK-26297][SQL] improve the doc of Distribution/Partitioning
## What changes were proposed in this pull request?

Some documents of `Distribution/Partitioning` are stale and misleading, this PR fixes them:
1. `Distribution` never have intra-partition requirement
2. `OrderedDistribution` does not require tuples that share the same value being colocated in the same partition.
3. `RangePartitioning` can provide a weaker guarantee for a prefix of its `ordering` expressions.

## How was this patch tested?

comment-only PR.

Closes #23249 from cloud-fan/doc.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-13 11:13:15 +08:00
Yuanjian Li bd8da3799d [SPARK-26193][SQL][FOLLOW UP] Read metrics rename and display text changes
## What changes were proposed in this pull request?
Follow up pr for #23207, include following changes:

- Rename `SQLShuffleMetricsReporter` to `SQLShuffleReadMetricsReporter` to make it match with write side naming.
- Display text changes for read side for naming consistent.
- Rename function in `ShuffleWriteProcessor`.
- Delete `private[spark]` in execution package.

## How was this patch tested?

Existing tests.

Closes #23286 from xuanyuanking/SPARK-26193-follow.

Authored-by: Yuanjian Li <xyliyuanjian@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-12 10:03:50 +08:00
liuxian d811369ce2
[SPARK-26300][SS] Remove a redundant checkForStreaming call
## What changes were proposed in this pull request?
If `checkForContinuous`  is called ( `checkForStreaming` is called in `checkForContinuous`  ), the `checkForStreaming`  mothod  will be called twice in `createQuery` , this is not necessary,  and the `checkForStreaming` method has a lot of statements,  so it's better to remove one of them.

## How was this patch tested?

Existing unit tests in `StreamingQueryManagerSuite` and `ContinuousAggregationSuite`

Closes #23251 from 10110346/isUnsupportedOperationCheckEnabled.

Authored-by: liuxian <liu.xian3@zte.com.cn>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-12-11 09:12:17 -08:00
jiake 5c67a9a7fa [SPARK-26316][SPARK-21052] Revert hash join metrics in that causes performance degradation
## What changes were proposed in this pull request?
The wrong implementation in the hash join metrics in [spark 21052](https://issues.apache.org/jira/browse/SPARK-21052) caused significant performance degradation in TPC-DS. And the result is [here](https://docs.google.com/spreadsheets/d/18a5BdOlmm8euTaRodyeWum9yu92mbWWu6JbhGXtr7yE/edit#gid=0) in TPC-DS 1TB scale. So we currently partial revert 21052.
**Cluster info:**

  | Master Node | Worker Nodes
-- | -- | --
Node | 1x | 4x
Processor | Intel(R) Xeon(R) Platinum 8170 CPU  2.10GHz | Intel(R) Xeon(R) Platinum 8180 CPU  2.50GHz
Memory | 192 GB | 384 GB
Storage Main | 8 x 960G SSD | 8 x 960G SSD
Network | 10Gbe |  
Role | CM Management NameNodeSecondary NameNodeResource ManagerHive Metastore Server | DataNodeNodeManager
OS Version | CentOS 7.2 | CentOS 7.2
Hadoop | Apache Hadoop 2.7.5 | Apache Hadoop 2.7.5
Hive | Apache Hive 2.2.0 |  
Spark | Apache Spark 2.1.0  & Apache Spark2.3.0 |  
JDK  version | 1.8.0_112 | 1.8.0_112

**Related parameters setting:**

Component | Parameter | Value
-- | -- | --
Yarn Resource Manager | yarn.scheduler.maximum-allocation-mb | 120GB
  | yarn.scheduler.minimum-allocation-mb | 1GB
  | yarn.scheduler.maximum-allocation-vcores | 121
  | Yarn.resourcemanager.scheduler.class | Fair Scheduler
Yarn Node Manager | yarn.nodemanager.resource.memory-mb | 120GB
  | yarn.nodemanager.resource.cpu-vcores | 121
Spark | spark.executor.memory | 110GB
  | spark.executor.cores | 50

## How was this patch tested?
N/A

Closes #23269 from JkSelf/partial-revert-21052.

Authored-by: jiake <ke.a.jia@intel.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-11 21:23:27 +08:00
Yuanjian Li bd7df6b1e1 [SPARK-26327][SQL] Bug fix for FileSourceScanExec metrics update and name changing
## What changes were proposed in this pull request?

As the description in [SPARK-26327](https://issues.apache.org/jira/browse/SPARK-26327), `postDriverMetricUpdates` was called on wrong place cause this bug, fix this by split the initializing of `selectedPartitions` and metrics updating logic. Add the updating logic in `inputRDD` initializing which can take effect in both code generation node and normal node. Also rename `metadataTime` to `fileListingTime` for clearer meaning.
## How was this patch tested?

New test case in `SQLMetricsSuite`.
Manual test:

|         | Before | After |
|---------|:--------:|:-------:|
| CodeGen |![image](https://user-images.githubusercontent.com/4833765/49741753-13c7e800-fcd2-11e8-97a8-8057b657aa3c.png)|![image](https://user-images.githubusercontent.com/4833765/49741774-1f1b1380-fcd2-11e8-98d9-78b950f4e43a.png)|
| Normal  |![image](https://user-images.githubusercontent.com/4833765/49741836-378b2e00-fcd2-11e8-80c3-ab462a6a3184.png)|![image](https://user-images.githubusercontent.com/4833765/49741860-4a056780-fcd2-11e8-9ef1-863de217f183.png)|

Closes #23277 from xuanyuanking/SPARK-26327.

Authored-by: Yuanjian Li <xyliyuanjian@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-11 18:47:21 +08:00
Maxim Gekk 4e1d859c19 [SPARK-26303][SQL] Return partial results for bad JSON records
## What changes were proposed in this pull request?

In the PR, I propose to return partial results from JSON datasource and JSON functions in the PERMISSIVE mode if some of JSON fields are parsed and converted to desired types successfully. The changes are made only for `StructType`. Whole bad JSON records are placed into the corrupt column specified by the `columnNameOfCorruptRecord` option or SQL config.

Partial results are not returned for malformed JSON input.

## How was this patch tested?

Added new UT which checks converting JSON strings with one invalid and one valid field at the end of the string.

Closes #23253 from MaxGekk/json-bad-record.

Lead-authored-by: Maxim Gekk <max.gekk@gmail.com>
Co-authored-by: Maxim Gekk <maxim.gekk@databricks.com>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-11 16:06:57 +08:00
Wenchen Fan 7d5f6e8c49 [SPARK-26293][SQL] Cast exception when having python udf in subquery
## What changes were proposed in this pull request?

This is a regression introduced by https://github.com/apache/spark/pull/22104 at Spark 2.4.0.

When we have Python UDF in subquery, we will hit an exception
```
Caused by: java.lang.ClassCastException: org.apache.spark.sql.catalyst.expressions.AttributeReference cannot be cast to org.apache.spark.sql.catalyst.expressions.PythonUDF
	at scala.collection.immutable.Stream.map(Stream.scala:414)
	at org.apache.spark.sql.execution.python.EvalPythonExec.$anonfun$doExecute$2(EvalPythonExec.scala:98)
	at org.apache.spark.rdd.RDD.$anonfun$mapPartitions$2(RDD.scala:815)
...
```

https://github.com/apache/spark/pull/22104 turned `ExtractPythonUDFs` from a physical rule to optimizer rule. However, there is a difference between a physical rule and optimizer rule. A physical rule always runs once, an optimizer rule may be applied twice on a query tree even the rule is located in a batch that only runs once.

For a subquery, the `OptimizeSubqueries` rule will execute the entire optimizer on the query plan inside subquery. Later on subquery will be turned to joins, and the optimizer rules will be applied to it again.

Unfortunately, the `ExtractPythonUDFs` rule is not idempotent. When it's applied twice on a query plan inside subquery, it will produce a malformed plan. It extracts Python UDF from Python exec plans.

This PR proposes 2 changes to be double safe:
1. `ExtractPythonUDFs` should skip python exec plans, to make the rule idempotent
2. `ExtractPythonUDFs` should skip subquery

## How was this patch tested?

a new test.

Closes #23248 from cloud-fan/python.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2018-12-11 14:16:51 +08:00
10129659 cbe92305cd [SPARK-26312][SQL] Replace RDDConversions.rowToRowRdd with RowEncoder to improve its conversion performance
## What changes were proposed in this pull request?

`RDDConversions` would get disproportionately slower as the number of columns in the query increased,
for the type of `converters` before is `scala.collection.immutable.::` which is a subtype of list.
This PR removing `RDDConversions` and using `RowEncoder` to convert the Row to InternalRow.

The test of `PrunedScanSuite` for 2000 columns and 20k rows takes 409 seconds before this PR, and 361 seconds after.

## How was this patch tested?

Test case of `PrunedScanSuite`

Closes #23262 from eatoncys/toarray.

Authored-by: 10129659 <chen.yanshan@zte.com.cn>
Signed-off-by: Hyukjin Kwon <gurwls223@apache.org>
2018-12-11 09:50:21 +08:00