## What changes were proposed in this pull request?
Image test seems failed in Python 3.6.0 / NumPy 1.13.3. I manually tested as below:
```
======================================================================
ERROR: test_read_images (pyspark.ml.tests.ImageReaderTest)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/.../spark/python/pyspark/ml/tests.py", line 1831, in test_read_images
self.assertEqual(ImageSchema.toImage(array, origin=first_row[0]), first_row)
File "/.../spark/python/pyspark/ml/image.py", line 149, in toImage
data = bytearray(array.astype(dtype=np.uint8).ravel())
TypeError: only integer scalar arrays can be converted to a scalar index
----------------------------------------------------------------------
Ran 1 test in 7.606s
```
To be clear, I think the error seems from NumPy - 75b2d5d427/numpy/core/src/multiarray/number.c (L947)
For a smaller scope:
```python
>>> import numpy as np
>>> bytearray(np.array([1]).astype(dtype=np.uint8))
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
TypeError: only integer scalar arrays can be converted to a scalar index
```
In Python 2.7 / NumPy 1.13.1, it prints:
```
bytearray(b'\x01')
```
So, here, I simply worked around it by converting it to bytes as below:
```python
>>> bytearray(np.array([1]).astype(dtype=np.uint8).tobytes())
bytearray(b'\x01')
```
Also, while looking into it again, I realised few arguments could be quite confusing, for example, `Row` that needs some specific attributes and `numpy.ndarray`. I added few type checking and added some tests accordingly. So, it shows an error message as below:
```
TypeError: array argument should be numpy.ndarray; however, it got [<class 'str'>].
```
## How was this patch tested?
Manually tested with `./python/run-tests`.
And also:
```
PYSPARK_PYTHON=python3 SPARK_TESTING=1 bin/pyspark pyspark.ml.tests ImageReaderTest
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#19835 from HyukjinKwon/SPARK-21866-followup.
## What changes were proposed in this pull request?
This updates a behavior of `addJar` method of `sparkContext` class. If path without any scheme is passed as input it is used literally without url encoding/decoding it.
## How was this patch tested?
A unit test is added for this.
Author: Jakub Dubovsky <jakub.dubovsky@seznam.cz>
Closes#19834 from james64/SPARK-22585-encode-add-jar.
The only remaining use of this class was the SparkStatusTracker, which
was modified to use the new status store. The test code to wait for
executors was moved to TestUtils and now uses the SparkStatusTracker API.
Indirectly, ConsoleProgressBar also uses this data. Because it has
some lower latency requirements, a shortcut to efficiently get the
active stages from the active listener was added to the AppStateStore.
Now that all UI code goes through the status store to get its data,
the FsHistoryProvider can be cleaned up to only replay event logs
when needed - that is, when there is no pre-existing disk store for
the application.
As part of this change I also modified the streaming UI to read the needed
data from the store, which was missed in the previous patch that made
JobProgressListener redundant.
Author: Marcelo Vanzin <vanzin@cloudera.com>
Closes#19750 from vanzin/SPARK-20650.
## What changes were proposed in this pull request?
- Solves the issue described in the ticket by preserving reservation and allocation info in all cases (port handling included).
- upgrades to 1.4
- Adds extra debug level logging to make debugging easier in the future, for example we add reservation info when applicable.
```
17/09/29 14:53:07 DEBUG MesosCoarseGrainedSchedulerBackend: Accepting offer: f20de49b-dee3-45dd-a3c1-73418b7de891-O32 with attributes: Map() allocation info: role: "spark-prive"
reservation info: name: "ports"
type: RANGES
ranges {
range {
begin: 31000
end: 32000
}
}
role: "spark-prive"
reservation {
principal: "test"
}
allocation_info {
role: "spark-prive"
}
```
- Some style cleanup.
## How was this patch tested?
Manually by running the example in the ticket with and without a principal. Specifically I tested it on a dc/os 1.10 cluster with 7 nodes and played with reservations. From the master node in order to reserve resources I executed:
```for i in 0 1 2 3 4 5 6
do
curl -i \
-d slaveId=90ec65ea-1f7b-479f-a824-35d2527d6d26-S$i \
-d resources='[
{
"name": "cpus",
"type": "SCALAR",
"scalar": { "value": 2 },
"role": "spark-role",
"reservation": {
"principal": ""
}
},
{
"name": "mem",
"type": "SCALAR",
"scalar": { "value": 8026 },
"role": "spark-role",
"reservation": {
"principal": ""
}
}
]' \
-X POST http://master.mesos:5050/master/reserve
done
```
Nodes had 4 cpus (m3.xlarge instances) and I reserved either 2 or 4 cpus (all for a role).
I verified it launches tasks on nodes with reserved resources under `spark-role` role only if
a) there are remaining resources for (*) default role and the spark driver has no role assigned to it.
b) the spark driver has a role assigned to it and it is the same role used in reservations.
I also tested this locally on my machine.
Author: Stavros Kontopoulos <st.kontopoulos@gmail.com>
Closes#19390 from skonto/fix_dynamic_reservation.
## What changes were proposed in this pull request?
This PR adds a new API to ` CodeGenenerator.splitExpression` since since several ` CodeGenenerator.splitExpression` are used with `ctx.INPUT_ROW` to avoid code duplication.
## How was this patch tested?
Used existing test suits
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#19821 from kiszk/SPARK-22608.
## What changes were proposed in this pull request?
Currently, in the optimize rule `PropagateEmptyRelation`, the following cases is not handled:
1. empty relation as right child in left outer join
2. empty relation as left child in right outer join
3. empty relation as right child in left semi join
4. empty relation as right child in left anti join
5. only one empty relation in full outer join
case 1 / 2 / 5 can be treated as **Cartesian product** and cause exception. See the new test cases.
## How was this patch tested?
Unit test
Author: Wang Gengliang <ltnwgl@gmail.com>
Closes#19825 from gengliangwang/SPARK-22615.
## What changes were proposed in this pull request?
For SQL write jobs, we only set metrics for the SQL listener and display them in the SQL plan UI. We should also set metrics for Spark task output metrics, which will be shown in spark job UI.
## How was this patch tested?
test it manually. For a simple write job
```
spark.range(1000).write.parquet("/tmp/p1")
```
now the spark job UI looks like
Author: Wenchen Fan <wenchen@databricks.com>
Closes#19833 from cloud-fan/ui.
## What changes were proposed in this pull request?
This is a stripped down version of the `KubernetesClusterSchedulerBackend` for Spark with the following components:
- Static Allocation of Executors
- Executor Pod Factory
- Executor Recovery Semantics
It's step 1 from the step-wise plan documented [here](https://github.com/apache-spark-on-k8s/spark/issues/441#issuecomment-330802935).
This addition is covered by the [SPIP vote](http://apache-spark-developers-list.1001551.n3.nabble.com/SPIP-Spark-on-Kubernetes-td22147.html) which passed on Aug 31 .
## How was this patch tested?
- The patch contains unit tests which are passing.
- Manual testing: `./build/mvn -Pkubernetes clean package` succeeded.
- It is a **subset** of the entire changelist hosted in http://github.com/apache-spark-on-k8s/spark which is in active use in several organizations.
- There is integration testing enabled in the fork currently [hosted by PepperData](spark-k8s-jenkins.pepperdata.org:8080) which is being moved over to RiseLAB CI.
- Detailed documentation on trying out the patch in its entirety is in: https://apache-spark-on-k8s.github.io/userdocs/running-on-kubernetes.html
cc rxin felixcheung mateiz (shepherd)
k8s-big-data SIG members & contributors: mccheah ash211 ssuchter varunkatta kimoonkim erikerlandson liyinan926 tnachen ifilonenko
Author: Yinan Li <liyinan926@gmail.com>
Author: foxish <ramanathana@google.com>
Author: mcheah <mcheah@palantir.com>
Closes#19468 from foxish/spark-kubernetes-3.
## What changes were proposed in this pull request?
`CatalogImpl.refreshTable` uses `foreach(..)` to refresh all tables in a view. This traverses all nodes in the subtree and calls `LogicalPlan.refresh()` on these nodes. However `LogicalPlan.refresh()` is also refreshing its children, as a result refreshing a large view can be quite expensive.
This PR just calls `LogicalPlan.refresh()` on the top node.
## How was this patch tested?
Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#19837 from hvanhovell/SPARK-22637.
## What changes were proposed in this pull request?
* JIRA: [SPARK-22431](https://issues.apache.org/jira/browse/SPARK-22431) : Creating Permanent view with illegal type
**Description:**
- It is possible in Spark SQL to create a permanent view that uses an nested field with an illegal name.
- For example if we create the following view:
```create view x as select struct('a' as `$q`, 1 as b) q```
- A simple select fails with the following exception:
```
select * from x;
org.apache.spark.SparkException: Cannot recognize hive type string: struct<$q:string,b:int>
at org.apache.spark.sql.hive.client.HiveClientImpl$.fromHiveColumn(HiveClientImpl.scala:812)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$getTableOption$1$$anonfun$apply$11$$anonfun$7.apply(HiveClientImpl.scala:378)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$getTableOption$1$$anonfun$apply$11$$anonfun$7.apply(HiveClientImpl.scala:378)
...
```
**Issue/Analysis**: Right now, we can create a view with a schema that cannot be read back by Spark from the Hive metastore. For more details, please see the discussion about the analysis and proposed fix options in comment 1 and comment 2 in the [SPARK-22431](https://issues.apache.org/jira/browse/SPARK-22431)
**Proposed changes**:
- Fix the hive table/view codepath to check whether the schema datatype is parseable by Spark before persisting it in the metastore. This change is localized to HiveClientImpl to do the check similar to the check in FromHiveColumn. This is fail-fast and we will avoid the scenario where we write something to the metastore that we are unable to read it back.
- Added new unit tests
- Ran the sql related unit test suites ( hive/test, sql/test, catalyst/test) OK
With the fix:
```
create view x as select struct('a' as `$q`, 1 as b) q;
17/11/28 10:44:55 ERROR SparkSQLDriver: Failed in [create view x as select struct('a' as `$q`, 1 as b) q]
org.apache.spark.SparkException: Cannot recognize hive type string: struct<$q:string,b:int>
at org.apache.spark.sql.hive.client.HiveClientImpl$.org$apache$spark$sql$hive$client$HiveClientImpl$$getSparkSQLDataType(HiveClientImpl.scala:884)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$org$apache$spark$sql$hive$client$HiveClientImpl$$verifyColumnDataType$1.apply(HiveClientImpl.scala:906)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$org$apache$spark$sql$hive$client$HiveClientImpl$$verifyColumnDataType$1.apply(HiveClientImpl.scala:906)
at scala.collection.Iterator$class.foreach(Iterator.scala:893)
...
```
## How was this patch tested?
- New unit tests have been added.
hvanhovell, Please review and share your thoughts/comments. Thank you so much.
Author: Sunitha Kambhampati <skambha@us.ibm.com>
Closes#19747 from skambha/spark22431.
## What changes were proposed in this pull request?
Currently, relation size is computed as the sum of file size, which is error-prone because storage format like parquet may have a much smaller file size compared to in-memory size. When we choose broadcast join based on file size, there's a risk of OOM. But if the number of rows is available in statistics, we can get a better estimation by `numRows * rowSize`, which helps to alleviate this problem.
## How was this patch tested?
Added a new test case for data source table and hive table.
Author: Zhenhua Wang <wzh_zju@163.com>
Author: Zhenhua Wang <wangzhenhua@huawei.com>
Closes#19743 from wzhfy/better_leaf_size.
## What changes were proposed in this pull request?
Mostly when we call `CodegenContext.splitExpressions`, we want to split the code into methods and pass the current inputs of the codegen context to these methods so that the code in these methods can still be evaluated.
This PR makes the expectation clear, while still keep the advanced version of `splitExpressions` to customize the inputs to pass to generated methods.
## How was this patch tested?
existing test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#19827 from cloud-fan/codegen.
## What changes were proposed in this pull request?
a minor cleanup for https://github.com/apache/spark/pull/19752 . Remove the outer if as the code is inside `do while`
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#19830 from cloud-fan/minor.
## What changes were proposed in this pull request?
When converting Pandas DataFrame/Series from/to Spark DataFrame using `toPandas()` or pandas udfs, timestamp values behave to respect Python system timezone instead of session timezone.
For example, let's say we use `"America/Los_Angeles"` as session timezone and have a timestamp value `"1970-01-01 00:00:01"` in the timezone. Btw, I'm in Japan so Python timezone would be `"Asia/Tokyo"`.
The timestamp value from current `toPandas()` will be the following:
```
>>> spark.conf.set("spark.sql.session.timeZone", "America/Los_Angeles")
>>> df = spark.createDataFrame([28801], "long").selectExpr("timestamp(value) as ts")
>>> df.show()
+-------------------+
| ts|
+-------------------+
|1970-01-01 00:00:01|
+-------------------+
>>> df.toPandas()
ts
0 1970-01-01 17:00:01
```
As you can see, the value becomes `"1970-01-01 17:00:01"` because it respects Python timezone.
As we discussed in #18664, we consider this behavior is a bug and the value should be `"1970-01-01 00:00:01"`.
## How was this patch tested?
Added tests and existing tests.
Author: Takuya UESHIN <ueshin@databricks.com>
Closes#19607 from ueshin/issues/SPARK-22395.
## What changes were proposed in this pull request?
In PySpark API Document, DataFrame.write.csv() says that setting the quote parameter to an empty string should turn off quoting. Instead, it uses the [null character](https://en.wikipedia.org/wiki/Null_character) as the quote.
This PR fixes the doc.
## How was this patch tested?
Manual.
```
cd python/docs
make html
open _build/html/pyspark.sql.html
```
Author: gaborgsomogyi <gabor.g.somogyi@gmail.com>
Closes#19814 from gaborgsomogyi/SPARK-22484.
## What changes were proposed in this pull request?
Code generation is disabled for CaseWhen when the number of branches is higher than `spark.sql.codegen.maxCaseBranches` (which defaults to 20). This was done to prevent the well known 64KB method limit exception.
This PR proposes to support code generation also in those cases (without causing exceptions of course). As a side effect, we could get rid of the `spark.sql.codegen.maxCaseBranches` configuration.
## How was this patch tested?
existing UTs
Author: Marco Gaido <mgaido@hortonworks.com>
Author: Marco Gaido <marcogaido91@gmail.com>
Closes#19752 from mgaido91/SPARK-22520.
## What changes were proposed in this pull request?
Currently, relation stats is the same whether cbo is enabled or not. While relation (`LogicalRelation` or `HiveTableRelation`) is a `LogicalPlan`, its behavior is inconsistent with other plans. This can cause confusion when user runs EXPLAIN COST commands. Besides, when CBO is disabled, we apply the size-only estimation strategy, so there's no need to propagate other catalog statistics to relation.
## How was this patch tested?
Enhanced existing tests case and added a test case.
Author: Zhenhua Wang <wangzhenhua@huawei.com>
Closes#19757 from wzhfy/catalog_stats_conversion.
## What changes were proposed in this pull request?
This PR changes `FormatString` code generation to place generated code for expressions for arguments into separated methods if these size could be large.
This PR passes variable arguments by using an `Object` array.
## How was this patch tested?
Added new test cases into `StringExpressionSuite`
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#19817 from kiszk/SPARK-22603.
## What changes were proposed in this pull request?
`ColumnVector#loadBytes` is only used as an optimization for reading UTF8String in `WritableColumnVector`, this PR moves this optimization to `WritableColumnVector` and simplified it.
## How was this patch tested?
existing test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#19815 from cloud-fan/load-bytes.
## What changes were proposed in this pull request?
This is a followup to reduce AppVeyor test time. This PR proposes to reduce the number of shuffle partitions to reduce the tasks running R workers in few particular tests.
The symptom is similar as described in `https://github.com/apache/spark/pull/19722`. There are many R processes newly launched on Windows without forking and it makes the differences of elapsed time between Linux and Windows.
Here is the simple comparison for before/after of this change. I manually tested this by disabling `spark.sparkr.use.daemon`. Disabling it resembles the tests on Windows:
**Before**
<img width="672" alt="2017-11-25 12 22 13" src="https://user-images.githubusercontent.com/6477701/33217949-b5528dfa-d17d-11e7-8050-75675c39eb20.png">
**After**
<img width="682" alt="2017-11-25 12 32 00" src="https://user-images.githubusercontent.com/6477701/33217958-c6518052-d17d-11e7-9f8e-1be21a784559.png">
So, this probably will reduce roughly more than 10 minutes.
## How was this patch tested?
AppVeyor tests
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#19816 from HyukjinKwon/SPARK-21693-followup.
## What changes were proposed in this pull request?
Set `-ea` and `-Xss4m` consistently for tests, to fix in particular:
```
OrderingSuite:
...
- GenerateOrdering with ShortType
*** RUN ABORTED ***
java.lang.StackOverflowError:
at org.codehaus.janino.CodeContext.flowAnalysis(CodeContext.java:370)
at org.codehaus.janino.CodeContext.flowAnalysis(CodeContext.java:541)
at org.codehaus.janino.CodeContext.flowAnalysis(CodeContext.java:541)
at org.codehaus.janino.CodeContext.flowAnalysis(CodeContext.java:541)
at org.codehaus.janino.CodeContext.flowAnalysis(CodeContext.java:541)
at org.codehaus.janino.CodeContext.flowAnalysis(CodeContext.java:541)
at org.codehaus.janino.CodeContext.flowAnalysis(CodeContext.java:541)
at org.codehaus.janino.CodeContext.flowAnalysis(CodeContext.java:541)
...
```
## How was this patch tested?
Existing tests. Manually verified it resolves the StackOverflowError this intends to resolve.
Author: Sean Owen <sowen@cloudera.com>
Closes#19820 from srowen/SPARK-22607.
The first scheduled renewal time is is set to the exact expiration time,
and all subsequent renewal times are 75% of the renewal time. This makes
it so that the inital renewal time is also 75%.
## What changes were proposed in this pull request?
Set the initial renewal time to be 75% of renewal time.
## How was this patch tested?
Tested locally in a test HDFS cluster, checking various renewal times.
Author: Kalvin Chau <kalvin.chau@viasat.com>
Closes#19798 from kalvinnchau/fix-inital-renewal-time.
## What changes were proposed in this pull request?
`nullsNativeAddress` and `valuesNativeAddress` are only used in tests and benchmark, no need to be top class API.
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#19818 from cloud-fan/minor.
## What changes were proposed in this pull request?
`ctx.currentVars` means the input variables for the current operator, which is already decided in `CodegenSupport`, we can set it there instead of `doConsume`.
also add more comments to help people understand the codegen framework.
After this PR, we now have a principle about setting `ctx.currentVars` and `ctx.INPUT_ROW`:
1. for non-whole-stage-codegen path, never set them. (permit some special cases like generating ordering)
2. for whole-stage-codegen `produce` path, mostly we don't need to set them, but blocking operators may need to set them for expressions that produce data from data source, sort buffer, aggregate buffer, etc.
3. for whole-stage-codegen `consume` path, mostly we don't need to set them because `currentVars` is automatically set to child input variables and `INPUT_ROW` is mostly not used. A few plans need to tweak them as they may have different inputs, or they use the input row.
## How was this patch tested?
existing tests.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#19803 from cloud-fan/codegen.
## What changes were proposed in this pull request?
This PR proposes to add cmd scripts so that Windows users can also run `spark-sql` script.
## How was this patch tested?
Manually tested on Windows.
**Before**
```cmd
C:\...\spark>.\bin\spark-sql
'.\bin\spark-sql' is not recognized as an internal or external command,
operable program or batch file.
C:\...\spark>.\bin\spark-sql.cmd
'.\bin\spark-sql.cmd' is not recognized as an internal or external command,
operable program or batch file.
```
**After**
```cmd
C:\...\spark>.\bin\spark-sql
...
spark-sql> SELECT 'Hello World !!';
...
Hello World !!
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#19808 from HyukjinKwon/spark-sql-cmd.
## What changes were proposed in this pull request?
In adaptive execution, the map output statistics of all mappers will be aggregated after previous stage is successfully executed. Driver takes the aggregation job while it will get slow when the number of `mapper * shuffle partitions` is large, since it only uses single thread to compute. This PR uses multi-thread to deal with this single point bottleneck.
## How was this patch tested?
Test cases are in `MapOutputTrackerSuite.scala`
Author: GuoChenzhao <chenzhao.guo@intel.com>
Author: gczsjdy <gczsjdy1994@gmail.com>
Closes#19763 from gczsjdy/single_point_mapstatistics.
## What changes were proposed in this pull request?
Currently history server v2 failed to start if `listing.ldb` is corrupted.
This patch get rid of the corrupted `listing.ldb` and re-create it.
The exception handling follows [opening disk store for app](0ffa7c488f/core/src/main/scala/org/apache/spark/deploy/history/FsHistoryProvider.scala (L307))
## How was this patch tested?
manual test
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Wang Gengliang <ltnwgl@gmail.com>
Closes#19786 from gengliangwang/listingException.
## What changes were proposed in this pull request?
This PR reduces the number of fields in the test case of `CastSuite` to fix an issue that is pointed at [here](https://github.com/apache/spark/pull/19800#issuecomment-346634950).
```
java.lang.OutOfMemoryError: GC overhead limit exceeded
java.lang.OutOfMemoryError: GC overhead limit exceeded
at org.codehaus.janino.UnitCompiler.findClass(UnitCompiler.java:10971)
at org.codehaus.janino.UnitCompiler.findTypeByName(UnitCompiler.java:7607)
at org.codehaus.janino.UnitCompiler.getReferenceType(UnitCompiler.java:5758)
at org.codehaus.janino.UnitCompiler.getType2(UnitCompiler.java:5732)
at org.codehaus.janino.UnitCompiler.access$13200(UnitCompiler.java:206)
at org.codehaus.janino.UnitCompiler$18.visitReferenceType(UnitCompiler.java:5668)
at org.codehaus.janino.UnitCompiler$18.visitReferenceType(UnitCompiler.java:5660)
at org.codehaus.janino.Java$ReferenceType.accept(Java.java:3356)
at org.codehaus.janino.UnitCompiler.getType(UnitCompiler.java:5660)
at org.codehaus.janino.UnitCompiler.buildLocalVariableMap(UnitCompiler.java:2892)
at org.codehaus.janino.UnitCompiler.compile(UnitCompiler.java:2764)
at org.codehaus.janino.UnitCompiler.compileDeclaredMethods(UnitCompiler.java:1262)
at org.codehaus.janino.UnitCompiler.compileDeclaredMethods(UnitCompiler.java:1234)
at org.codehaus.janino.UnitCompiler.compile2(UnitCompiler.java:538)
at org.codehaus.janino.UnitCompiler.compile2(UnitCompiler.java:890)
at org.codehaus.janino.UnitCompiler.compile2(UnitCompiler.java:894)
at org.codehaus.janino.UnitCompiler.access$600(UnitCompiler.java:206)
at org.codehaus.janino.UnitCompiler$2.visitMemberClassDeclaration(UnitCompiler.java:377)
at org.codehaus.janino.UnitCompiler$2.visitMemberClassDeclaration(UnitCompiler.java:369)
at org.codehaus.janino.Java$MemberClassDeclaration.accept(Java.java:1128)
at org.codehaus.janino.UnitCompiler.compile(UnitCompiler.java:369)
at org.codehaus.janino.UnitCompiler.compileDeclaredMemberTypes(UnitCompiler.java:1209)
at org.codehaus.janino.UnitCompiler.compile2(UnitCompiler.java:564)
at org.codehaus.janino.UnitCompiler.compile2(UnitCompiler.java:890)
at org.codehaus.janino.UnitCompiler.compile2(UnitCompiler.java:894)
at org.codehaus.janino.UnitCompiler.access$600(UnitCompiler.java:206)
at org.codehaus.janino.UnitCompiler$2.visitMemberClassDeclaration(UnitCompiler.java:377)
at org.codehaus.janino.UnitCompiler$2.visitMemberClassDeclaration(UnitCompiler.java:369)
at org.codehaus.janino.Java$MemberClassDeclaration.accept(Java.java:1128)
at org.codehaus.janino.UnitCompiler.compile(UnitCompiler.java:369)
at org.codehaus.janino.UnitCompiler.compileDeclaredMemberTypes(UnitCompiler.java:1209)
at org.codehaus.janino.UnitCompiler.compile2(UnitCompiler.java:564)
...
```
## How was this patch tested?
Used existing test case
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#19806 from kiszk/SPARK-22595.
## What changes were proposed in this pull request?
When I played with codegen in developing another PR, I found the value of `CodegenContext.INPUT_ROW` is not reliable. Under wholestage codegen, it is assigned to null first and then suddenly changed to `i`.
The reason is `GenerateOrdering` changes `CodegenContext.INPUT_ROW` but doesn't restore it back.
## How was this patch tested?
Added test.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#19800 from viirya/SPARK-22591.
## What changes were proposed in this pull request?
We have 2 different methods to convert filters for hive, regarding a config. This introduces duplicated and inconsistent code(e.g. one use helper objects for pattern match and one doesn't).
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#19801 from cloud-fan/cleanup.
## What changes were proposed in this pull request?
a followup of https://github.com/apache/spark/pull/19779 , to simplify the file creation.
## How was this patch tested?
test only change
Author: Wenchen Fan <wenchen@databricks.com>
Closes#19799 from cloud-fan/minor.
## What changes were proposed in this pull request?
Fixing the way how `SPARK_HOME` is resolved on Windows. While the previous version was working with the built release download, the set of directories changed slightly for the PySpark `pip` or `conda` install. This has been reflected in Linux files in `bin` but not for Windows `cmd` files.
First fix improves the way how the `jars` directory is found, as this was stoping Windows version of `pip/conda` install from working; JARs were not found by on Session/Context setup.
Second fix is adding `find-spark-home.cmd` script, which uses `find_spark_home.py` script, as the Linux version, to resolve `SPARK_HOME`. It is based on `find-spark-home` bash script, though, some operations are done in different order due to the `cmd` script language limitations. If environment variable is set, the Python script `find_spark_home.py` will not be run. The process can fail if Python is not installed, but it will mostly use this way if PySpark is installed via `pip/conda`, thus, there is some Python in the system.
## How was this patch tested?
Tested on local installation.
Author: Jakub Nowacki <j.s.nowacki@gmail.com>
Closes#19370 from jsnowacki/fix_spark_cmds.
## What changes were proposed in this pull request?
Adding spark image reader, an implementation of schema for representing images in spark DataFrames
The code is taken from the spark package located here:
(https://github.com/Microsoft/spark-images)
Please see the JIRA for more information (https://issues.apache.org/jira/browse/SPARK-21866)
Please see mailing list for SPIP vote and approval information:
(http://apache-spark-developers-list.1001551.n3.nabble.com/VOTE-SPIP-SPARK-21866-Image-support-in-Apache-Spark-td22510.html)
# Background and motivation
As Apache Spark is being used more and more in the industry, some new use cases are emerging for different data formats beyond the traditional SQL types or the numerical types (vectors and matrices). Deep Learning applications commonly deal with image processing. A number of projects add some Deep Learning capabilities to Spark (see list below), but they struggle to communicate with each other or with MLlib pipelines because there is no standard way to represent an image in Spark DataFrames. We propose to federate efforts for representing images in Spark by defining a representation that caters to the most common needs of users and library developers.
This SPIP proposes a specification to represent images in Spark DataFrames and Datasets (based on existing industrial standards), and an interface for loading sources of images. It is not meant to be a full-fledged image processing library, but rather the core description that other libraries and users can rely on. Several packages already offer various processing facilities for transforming images or doing more complex operations, and each has various design tradeoffs that make them better as standalone solutions.
This project is a joint collaboration between Microsoft and Databricks, which have been testing this design in two open source packages: MMLSpark and Deep Learning Pipelines.
The proposed image format is an in-memory, decompressed representation that targets low-level applications. It is significantly more liberal in memory usage than compressed image representations such as JPEG, PNG, etc., but it allows easy communication with popular image processing libraries and has no decoding overhead.
## How was this patch tested?
Unit tests in scala ImageSchemaSuite, unit tests in python
Author: Ilya Matiach <ilmat@microsoft.com>
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#19439 from imatiach-msft/ilmat/spark-images.
## What changes were proposed in this pull request?
A frequently reported issue of Spark is the Java 64kb compile error. This is because Spark generates a very big method and it's usually caused by 3 reasons:
1. a deep expression tree, e.g. a very complex filter condition
2. many individual expressions, e.g. expressions can have many children, operators can have many expressions.
3. a deep query plan tree (with whole stage codegen)
This PR focuses on 1. There are already several patches(#15620#18972#18641) trying to fix this issue and some of them are already merged. However this is an endless job as every non-leaf expression has this issue.
This PR proposes to fix this issue in `Expression.genCode`, to make sure the code for a single expression won't grow too big.
According to maropu 's benchmark, no regression is found with TPCDS (thanks maropu !): https://docs.google.com/spreadsheets/d/1K3_7lX05-ZgxDXi9X_GleNnDjcnJIfoSlSCDZcL4gdg/edit?usp=sharing
## How was this patch tested?
existing test
Author: Wenchen Fan <wenchen@databricks.com>
Author: Wenchen Fan <cloud0fan@gmail.com>
Closes#19767 from cloud-fan/codegen.
## What changes were proposed in this pull request?
Ticket: [SPARK-22572](https://issues.apache.org/jira/browse/SPARK-22572)
## How was this patch tested?
Added a new test case to `org.apache.spark.repl.ReplSuite`
Author: Mark Petruska <petruska.mark@gmail.com>
Closes#19791 from mpetruska/SPARK-22572.
## What changes were proposed in this pull request?
This PR addresses [the spelling miss](https://github.com/apache/spark/pull/17436#discussion_r152189670) of the config name `spark.sql.columnVector.offheap.enabled`.
We should use `spark.sql.columnVector.offheap.enabled`.
## How was this patch tested?
Existing tests
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#19794 from kiszk/SPARK-20101-follow.
## What changes were proposed in this pull request?
SPARK-19580 Support for avro.schema.url while writing to hive table
SPARK-19878 Add hive configuration when initialize hive serde in InsertIntoHiveTable.scala
SPARK-17920 HiveWriterContainer passes null configuration to serde.initialize, causing NullPointerException in AvroSerde when using avro.schema.url
Support writing to Hive table which uses Avro schema url 'avro.schema.url'
For ex:
create external table avro_in (a string) stored as avro location '/avro-in/' tblproperties ('avro.schema.url'='/avro-schema/avro.avsc');
create external table avro_out (a string) stored as avro location '/avro-out/' tblproperties ('avro.schema.url'='/avro-schema/avro.avsc');
insert overwrite table avro_out select * from avro_in; // fails with java.lang.NullPointerException
WARN AvroSerDe: Encountered exception determining schema. Returning signal schema to indicate problem
java.lang.NullPointerException
at org.apache.hadoop.fs.FileSystem.getDefaultUri(FileSystem.java:182)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:174)
## Changes proposed in this fix
Currently 'null' value is passed to serializer, which causes NPE during insert operation, instead pass Hadoop configuration object
## How was this patch tested?
Added new test case in VersionsSuite
Author: vinodkc <vinod.kc.in@gmail.com>
Closes#19779 from vinodkc/br_Fix_SPARK-17920.
## What changes were proposed in this pull request?
Let’s say I have a nested AND expression shown below and p2 can not be pushed down,
(p1 AND p2) OR p3
In current Spark code, during data source filter translation, (p1 AND p2) is returned as p1 only and p2 is simply lost. This issue occurs with JDBC data source and is similar to [SPARK-12218](https://github.com/apache/spark/pull/10362) for Parquet. When we have AND nested below another expression, we should either push both legs or nothing.
Note that:
- The current Spark code will always split conjunctive predicate before it determines if a predicate can be pushed down or not
- If I have (p1 AND p2) AND p3, it will be split into p1, p2, p3. There won't be nested AND expression.
- The current Spark code logic for OR is OK. It either pushes both legs or nothing.
The same translation method is also called by Data Source V2.
## How was this patch tested?
Added new unit test cases to JDBCSuite
gatorsmile
Author: Jia Li <jiali@us.ibm.com>
Closes#19776 from jliwork/spark-22548.
## What changes were proposed in this pull request?
This PR changes `cast` code generation to place generated code for expression for fields of a structure into separated methods if these size could be large.
## How was this patch tested?
Added new test cases into `CastSuite`
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#19730 from kiszk/SPARK-22500.
## What changes were proposed in this pull request?
Added the histogram representation to the output of the `DESCRIBE EXTENDED table_name column_name` command.
## How was this patch tested?
Modified SQL UT and checked output
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Marco Gaido <mgaido@hortonworks.com>
Closes#19774 from mgaido91/SPARK-22475.
## What changes were proposed in this pull request?
Add python api for VectorIndexerModel support handle unseen categories via handleInvalid.
## How was this patch tested?
doctest added.
Author: WeichenXu <weichen.xu@databricks.com>
Closes#19753 from WeichenXu123/vector_indexer_invalid_py.
## What changes were proposed in this pull request?
This PR is to clean the usage of addMutableState and splitExpressions
1. replace hardcoded type string to ctx.JAVA_BOOLEAN etc.
2. create a default value of the initCode for ctx.addMutableStats
3. Use named arguments when calling `splitExpressions `
## How was this patch tested?
The existing test cases
Author: gatorsmile <gatorsmile@gmail.com>
Closes#19790 from gatorsmile/codeClean.
## What changes were proposed in this pull request?
This PR changes `elt` code generation to place generated code for expression for arguments into separated methods if these size could be large.
This PR resolved the case of `elt` with a lot of argument
## How was this patch tested?
Added new test cases into `StringExpressionsSuite`
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#19778 from kiszk/SPARK-22550.
## What changes were proposed in this pull request?
This PR changes `GenerateUnsafeRowJoiner.create()` code generation to place generated code for statements to operate bitmap and offset into separated methods if these size could be large.
## How was this patch tested?
Added a new test case into `GenerateUnsafeRowJoinerSuite`
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#19737 from kiszk/SPARK-22508.
## What changes were proposed in this pull request?
Besides conditional expressions such as `when` and `if`, users may want to conditionally execute python udfs by short-curcuit evaluation. We should also explicitly note that python udfs don't support this kind of conditional execution too.
## How was this patch tested?
N/A, just document change.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#19787 from viirya/SPARK-22541.
## What changes were proposed in this pull request?
This PR changes `concat_ws` code generation to place generated code for expression for arguments into separated methods if these size could be large.
This PR resolved the case of `concat_ws` with a lot of argument
## How was this patch tested?
Added new test cases into `StringExpressionsSuite`
Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>
Closes#19777 from kiszk/SPARK-22549.
This change hooks up the config reader to `SparkConf.getDeprecatedConfig`,
so that config constants with deprecated names generate the proper warnings.
It also changes two deprecated configs from the new "alternatives" system to
the old deprecation system, since they're not yet hooked up to each other.
Added a few unit tests to verify the desired behavior.
Author: Marcelo Vanzin <vanzin@cloudera.com>
Closes#19760 from vanzin/SPARK-22533.
