Commit graph

906 commits

Author SHA1 Message Date
Kousuke Saruta b1c4fc7fc7 [SPARK-34008][BUILD] Upgrade derby to 10.14.2.0
### What changes were proposed in this pull request?

This PR upgrades `derby` to `10.14.2.0`.

You can check the major changes from the following URLs.

* 10.13.1.1 http://svn.apache.org/repos/asf/db/derby/code/tags/10.13.1.1/RELEASE-NOTES.html
* 10.14.1.0 http://svn.apache.org/repos/asf/db/derby/code/tags/10.14.1.0/RELEASE-NOTES.html
* 10.14.2.0 http://svn.apache.org/repos/asf/db/derby/code/tags/10.14.2.0/RELEASE-NOTES.html

### Why are the changes needed?

It seems to be the final release which supports `JDK8` as the minimum required version.
After `10.15.1.3`, the minimum required version is `JDK9`.
https://db.apache.org/derby/

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Existing tests.

Closes #31032 from sarutak/upgrade-derby.

Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2021-01-05 21:50:16 -08:00
huangtianhua 14c2edae7e [SPARK-34009][BUILD] To activate profile 'aarch64' based on OS settings
Instead of taking parameter '-Paarch64' when maven build
to activate the profile based on OS settings automatically,
than we can use same command to build on aarch64.

### What changes were proposed in this pull request?
Activate profile 'aarch64' based on OS

### Why are the changes needed?
After this change, we build spark using the same command for aarch64 as x86.

### Does this PR introduce _any_ user-facing change?
No.
After this change, no need to taking parameter '-Paarch64' when build, but take the parameter works also.

### How was this patch tested?
ARM daily CI.

Closes #31036 from huangtianhua/SPARK-34009.

Authored-by: huangtianhua <huangtianhua223@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2021-01-05 21:50:21 +09:00
HyukjinKwon 356fdc9a7f [SPARK-34007][BUILD] Downgrade scala-maven-plugin to 4.3.0
### What changes were proposed in this pull request?

This PR is a partial revert of https://github.com/apache/spark/pull/30456 by downgrading scala-maven-plugin from 4.4.0 to 4.3.0.

Currently, when you run the docker release script (`./dev/create-release/do-release-docker.sh`), it fails to compile as below during incremental compilation with zinc for an unknown reason:

```
[INFO] Compiling 21 Scala sources and 3 Java sources to /opt/spark-rm/output/spark-3.1.0-bin-hadoop2.7/resource-managers/yarn/target/scala-2.12/test-classes ...
[ERROR] ## Exception when compiling 24 sources to /opt/spark-rm/output/spark-3.1.0-bin-hadoop2.7/resource-managers/yarn/target/scala-2.12/test-classes
java.lang.SecurityException: class "javax.servlet.SessionCookieConfig"'s signer information does not match signer information of other classes in the same package
java.lang.ClassLoader.checkCerts(ClassLoader.java:891)
java.lang.ClassLoader.preDefineClass(ClassLoader.java:661)
java.lang.ClassLoader.defineClass(ClassLoader.java:754)
java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
java.net.URLClassLoader.defineClass(URLClassLoader.java:468)
java.net.URLClassLoader.access$100(URLClassLoader.java:74)
java.net.URLClassLoader$1.run(URLClassLoader.java:369)
java.net.URLClassLoader$1.run(URLClassLoader.java:363)
java.security.AccessController.doPrivileged(Native Method)
java.net.URLClassLoader.findClass(URLClassLoader.java:362)
java.lang.ClassLoader.loadClass(ClassLoader.java:418)
java.lang.ClassLoader.loadClass(ClassLoader.java:351)
java.lang.Class.getDeclaredMethods0(Native Method)
java.lang.Class.privateGetDeclaredMethods(Class.java:2701)
java.lang.Class.privateGetPublicMethods(Class.java:2902)
java.lang.Class.getMethods(Class.java:1615)
sbt.internal.inc.ClassToAPI$.toDefinitions0(ClassToAPI.scala:170)
sbt.internal.inc.ClassToAPI$.$anonfun$toDefinitions$1(ClassToAPI.scala:123)
scala.collection.mutable.HashMap.getOrElseUpdate(HashMap.scala:86)
sbt.internal.inc.ClassToAPI$.toDefinitions(ClassToAPI.scala:123)
sbt.internal.inc.ClassToAPI$.$anonfun$process$1(ClassToAPI.scala:3
```

This happens when it builds Spark with Hadoop 2. It doesn't reproduce when you build this alone. It should follow the sequence of build in the release script.

This is fixed by downgrading. Looks like there is a regression in scala-maven-plugin somewhere between 4.4.0 and 4.3.0.

### Why are the changes needed?

To unblock the release.

### Does this PR introduce _any_ user-facing change?

No, dev-only.

### How was this patch tested?

It can be tested as below:

```bash
./dev/create-release/do-release-docker.sh -d $WORKING_DIR
```

Closes #31031 from HyukjinKwon/SPARK-34007.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2021-01-05 17:20:08 +09:00
William Hyun 90f4ecf8cc [SPARK-33996][BUILD] Upgrade checkstyle plugins
### What changes were proposed in this pull request?

This PR aims to upgrade `checkstyle` Maven plugins and its dependency, `com.puppycrawl.tools:checkstyle`.

### Why are the changes needed?

The changes are needed to support Java 14+ better.
- https://checkstyle.org/releasenotes.html#Release_8.39
- https://checkstyle.org/releasenotes.html#Release_8.38
- https://checkstyle.org/releasenotes.html#Release_8.37
- https://checkstyle.org/releasenotes.html#Release_8.36
- https://checkstyle.org/releasenotes.html#Release_8.35
- https://checkstyle.org/releasenotes.html#Release_8.34
- https://checkstyle.org/releasenotes.html#Release_8.33
- https://checkstyle.org/releasenotes.html#Release_8.32
- https://checkstyle.org/releasenotes.html#Release_8.31
- https://checkstyle.org/releasenotes.html#Release_8.30

### Does this PR introduce _any_ user-facing change?
No.

### How was this patch tested?
Pass the CI.

Closes #31019 from williamhyun/checkstyle.

Authored-by: William Hyun <williamhyun3@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2021-01-04 14:54:16 -08:00
William Hyun bd346f4a2d [SPARK-33957][BUILD] Update commons-lang3 to 3.11
### What changes were proposed in this pull request?

This PR aims to update commons-lang3 to 3.11 to support Java 16+ better.

### Why are the changes needed?

commons-lang3 has the following bug fixes and Java 16 support.
- https://commons.apache.org/proper/commons-lang/changes-report.html#a3.11

### Does this PR introduce _any_ user-facing change?

N/A

### How was this patch tested?
Pass the CIs.

Closes #30990 from williamhyun/Commons-lang3.

Authored-by: William Hyun <williamhyun3@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2021-01-01 19:59:17 -08:00
yangjie01 9d6dbe0fe5 [SPARK-33775][FOLLOWUP][TEST-MAVEN][BUILD] Suppress maven compilation warnings in Scala 2.13
### What changes were proposed in this pull request?
This pr is followup of SPARK-33775, the main change of this pr this sync suppression rules from `SparkBuild.scala` to `pom.xml` to let maven build have the same suppression ability for compilation warnings in Scala 2.13

### Why are the changes needed?
Suppress unimportant compilation warnings in Scala 2.13 with maven build.

### Does this PR introduce _any_ user-facing change?
No

### How was this patch tested?

- Pass the Jenkins or GitHub Action
- Local manual test:The suppressed compilation warnings are no longer printed to the console.

Closes #30951 from LuciferYang/SPARK-33775-FOLLOWUP.

Authored-by: yangjie01 <yangjie01@baidu.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-12-29 21:42:00 +09:00
yangjie01 37ae0a6086 [SPARK-33560][TEST-MAVEN][BUILD] Add "unused-import" check to Maven compilation process
### What changes were proposed in this pull request?

Similar to SPARK-33441, this pr add `unused-import` check to Maven compilation process. After this pr `unused-import` will trigger Maven compilation error.

For Scala 2.13 profile, this pr also left TODO(SPARK-33499) similar to SPARK-33441 because `scala.language.higherKinds` no longer needs to be imported explicitly since Scala 2.13.1

### Why are the changes needed?
Let Maven build also check for unused imports as compilation error.

### Does this PR introduce _any_ user-facing change?
No

### How was this patch tested?

- Pass the Jenkins or GitHub Action

- Local manual test:add an unused import intentionally to trigger maven compilation error.

Closes #30784 from LuciferYang/SPARK-33560.

Authored-by: yangjie01 <yangjie01@baidu.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-12-26 17:40:19 -06:00
Dongjoon Hyun 00642ee19e
[SPARK-33843][BUILD] Upgrade to Zstd 1.4.8
### What changes were proposed in this pull request?

This PR aims to upgrade Zstd library to 1.4.8.

### Why are the changes needed?

This will bring Zstd 1.4.7 and 1.4.8 improvement and bug fixes and the following from `zstd-jni`.
- https://github.com/facebook/zstd/releases/tag/v1.4.7
- https://github.com/facebook/zstd/releases/tag/v1.4.8
- https://github.com/luben/zstd-jni/issues/153 (Apple M1 architecture)

### Does this PR introduce _any_ user-facing change?

This will unblock Apple Silicon usage.

### How was this patch tested?

Pass the CIs.

Closes #30848 from dongjoon-hyun/SPARK-33843.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-19 06:59:44 -08:00
Sean Owen 131a23d88a [SPARK-33831][UI] Update to jetty 9.4.34
### What changes were proposed in this pull request?

Update Jetty to 9.4.34

### Why are the changes needed?

Picks up fixes and improvements, including a possible CVE fix.

https://github.com/eclipse/jetty.project/releases/tag/jetty-9.4.33.v20201020
https://github.com/eclipse/jetty.project/releases/tag/jetty-9.4.34.v20201102

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Existing tests.

Closes #30828 from srowen/SPARK-33831.

Authored-by: Sean Owen <srowen@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-17 19:09:57 -08:00
Kent Yao 4d47ac4b4b [SPARK-33705][SQL][TEST] Fix HiveThriftHttpServerSuite flakiness
### What changes were proposed in this pull request?
TO FIX flaky tests:

https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/132345/testReport/
```
org.apache.spark.sql.hive.thriftserver.HiveThriftHttpServerSuite.JDBC query execution
org.apache.spark.sql.hive.thriftserver.HiveThriftHttpServerSuite.Checks Hive version
org.apache.spark.sql.hive.thriftserver.HiveThriftHttpServerSuite.SPARK-24829 Checks cast as float
```

The root cause here is a jar conflict issue.
`NewCookie.isHttpOnly` is not defined in the `jsr311-api.jar` which conflicts
The transitive artifact `jsr311-api.jar` of `hadoop-client` is excluded at the maven side. See https://issues.apache.org/jira/browse/SPARK-27179.

The Jenkins PR builder and Github Action use `SBT` as the compiler tool.

First, the exclusion rule from maven is not followed by sbt, so I was able to see `jsr311-api.jar` from maven cache to be added to the classpath directly. **This seems to be a  bug of `sbt-pom-reader` plugin but I'm not that sure.**

Then I added an `ExcludeRule` for the `hive-thriftserver` module at the SBT side and did see the `jsr311-api.jar` gone, but the CI jobs still failed with the same error.

I added a trace log in ThriftHttpServlet

```s
ERROR ThriftHttpServlet: !!!!!!!!! Suspect???????? --->
file:/home/jenkins/workspace/SparkPullRequestBuilder/assembly/target/scala-2.12/jars/jsr311-api-1.1.1.jar
```
And the log pointed out that the assembly phase copied it to `assembly/target/scala-2.12/jars/` which will be added to the classpath too. With the help of SBT `dependencyTree` tool, I saw the `jsr311-api` again as a transitive of `jersery-core` from `yarn` module with a `test` scope. So **This seems to be another bug from the SBT side of the `sbt-assembly` plugin.**  It copied a test scope transitive artifact to the assembly output.

In this PR, I defined some rules in SparkBuild.scala to bypass the potential bugs from the SBT side.

First, exclude the `jsr311` from all over the project and then add it back separately to the YARN module for SBT.

Additionally, the HiveThriftServerSuites was reflected for reducing flakiness too, but not related to the bugs I have found so far.

### Why are the changes needed?

fix test here

### Does this PR introduce _any_ user-facing change?

NO
### How was this patch tested?

passing jenkins and ga

Closes #30643 from yaooqinn/HiveThriftHttpServerSuite.

Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-12-14 05:14:38 +00:00
Yuming Wang 01b73ae638
[SPARK-33766][BUILD] Upgrade Jackson to 2.11.4
### What changes were proposed in this pull request?

This pr upgrade Jackson to 2.11.4.
Jackson Release 2.11: https://github.com/FasterXML/jackson/wiki/Jackson-Release-2.11

### Why are the changes needed?

Make it easy to upgrade dependency because Jackson 2.10 is not compatible with 2.11:
```
com.fasterxml.jackson.databind.JsonMappingException: Scala module 2.10.5 requires Jackson Databind version >= 2.10.0 and < 2.11.0
```
[Avro](https://issues.apache.org/jira/browse/AVRO-2967) has upgraded Jackson to 2.11.3.
[Parquet](https://issues.apache.org/jira/browse/PARQUET-1895) has upgraded Jackson to 2.11.2.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Existing test.

Closes #30746 from wangyum/SPARK-33766.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-13 14:40:55 -08:00
Nicholas Marion 99848e530f
[SPARK-33762][BUILD] Upgrade commons-codec to 1.15
### What changes were proposed in this pull request?

### Why are the changes needed?

Open Source scans are reporting a potential encoding/decoding issue related to versions of commons-codec prior to 1.13. Commit referenced: 48b615756d

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Existing tests.

Closes #30740 from n-marion/SPARK-33762_upgrade-commons-codec.

Authored-by: Nicholas Marion <nmarion@us.ibm.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-13 14:36:54 -08:00
Dongjoon Hyun 1ba1732beb [SPARK-33295][BUILD] Upgrade ORC to 1.6.6
### What changes were proposed in this pull request?

This PR aims to upgrade Apache ORC to 1.6.6 for Apache Spark 3.2.0.

### Why are the changes needed?

This brings the latest bug fixes and features.
Apache Iceberg is already using Apache ORC 1.6.6.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the CIs.

Closes #30715 from dongjoon-hyun/SPARK-33295.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-10 19:15:01 -08:00
Liang-Chi Hsieh 667f64f447
[SPARK-33725][BUILD] Upgrade snappy-java to 1.1.8.2
### What changes were proposed in this pull request?

This upgrades snappy-java to 1.1.8.2.

### Why are the changes needed?

Minor version upgrade that includes:

- [Fixed](https://github.com/xerial/snappy-java/pull/265) an initialization issue when using a recent Mac OS X version
- Support Apple Silicon (M1, Mac-aarch64)
- Fixed the pure-java Snappy fallback logic when no native library for your platform is found.

### Does this PR introduce _any_ user-facing change?

No

### How was this patch tested?

Unit test.

Closes #30690 from viirya/upgrade-snappy.

Authored-by: Liang-Chi Hsieh <viirya@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-09 14:26:53 -08:00
Nicholas Marion 3ac70f169d
[SPARK-33695][BUILD] Upgrade to jackson to 2.10.5 and jackson-databind to 2.10.5.1
### What changes were proposed in this pull request?

Upgrade the jackson dependencies to 2.10.5 and jackson-databind to 2.10.5.1

### Why are the changes needed?

Jackson dependency has vulnerability CVE-2020-25649.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Existing unit tests.

Closes #30656 from n-marion/SPARK-33695_upgrade-jackson.

Authored-by: Nicholas Marion <nmarion@us.ibm.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-08 12:11:06 -08:00
Kousuke Saruta d48ef34911
[SPARK-33684][BUILD] Upgrade httpclient from 4.5.6 to 4.5.13
### What changes were proposed in this pull request?

This PR upgrades `commons.httpclient` from `4.5.6` to `4.5.13`.
4.5.6 is released over 2 years ago and now we can use more stable `4.5.13`.
https://archive.apache.org/dist/httpcomponents/httpclient/RELEASE_NOTES-4.5.x.txt

### Why are the changes needed?

To follow the more stable release.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Should be done by the existing tests.

Closes #30634 from sarutak/upgrade-httpclient.

Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-06 23:02:36 -08:00
Dongjoon Hyun de9818f043
[SPARK-33662][BUILD] Setting version to 3.2.0-SNAPSHOT
### What changes were proposed in this pull request?

This PR aims to update `master` branch version to 3.2.0-SNAPSHOT.

### Why are the changes needed?

Start to prepare Apache Spark 3.2.0.

### Does this PR introduce _any_ user-facing change?

N/A.

### How was this patch tested?

Pass the CIs.

Closes #30606 from dongjoon-hyun/SPARK-3.2.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-04 14:10:42 -08:00
Kousuke Saruta 91baab77f7
[SPARK-33656][TESTS] Add option to keep container after tests finish for DockerJDBCIntegrationSuites for debug
### What changes were proposed in this pull request?

This PR add an option to keep container after DockerJDBCIntegrationSuites (e.g. DB2IntegrationSuite, PostgresIntegrationSuite) finish.
By setting a system property `spark.test.docker.keepContainer` to `true`, we can use this option.

### Why are the changes needed?

If some error occur during the tests, it would be useful to keep the container for debug.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

I confirmed that the container is kept after the test by the following commands.
```
# With sbt
$ build/sbt -Dspark.test.docker.keepContainer=true -Pdocker-integration-tests -Phive -Phive-thriftserver package "testOnly org.apache.spark.sql.jdbc.MariaDBKrbIntegrationSuite"

# With Maven
$ build/mvn -Dspark.test.docker.keepContainer=true -Pdocker-integration-tests -Phive -Phive-thriftserver -Dtest=none -DwildcardSuites=org.apache.spark.sql.jdbc.MariaDBKrbIntegrationSuite test

$ docker container ls
```

I also confirmed that there are no regression for all the subclasses of `DockerJDBCIntegrationSuite` with sbt/Maven.
* MariaDBKrbIntegrationSuite
* DB2KrbIntegrationSuite
* PostgresKrbIntegrationSuite
* MySQLIntegrationSuite
* PostgresIntegrationSuite
* DB2IntegrationSuite
* MsSqlServerintegrationsuite
* OracleIntegrationSuite
* v2.MySQLIntegrationSuite
* v2.PostgresIntegrationSuite
* v2.DB2IntegrationSuite
* v2.MsSqlServerIntegrationSuite
* v2.OracleIntegrationSuite

NOTE: `DB2IntegrationSuite`, `v2.DB2IntegrationSuite` and `DB2KrbIntegrationSuite` can fail due to the too much short connection timeout. It's a separate issue and I'll fix it in #30583

Closes #30601 from sarutak/keepContainer.

Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-12-03 23:47:43 -08:00
Dongjoon Hyun 290aa02179 [SPARK-33618][CORE] Use hadoop-client instead of hadoop-client-api to make hadoop-aws work
### What changes were proposed in this pull request?

This reverts commit SPARK-33212 (cb3fa6c936) mostly with three exceptions:
1. `SparkSubmitUtils` was updated recently by SPARK-33580
2. `resource-managers/yarn/pom.xml` was updated recently by SPARK-33104 to add `hadoop-yarn-server-resourcemanager` test dependency.
3. Adjust `com.fasterxml.jackson.module:jackson-module-jaxb-annotations` dependency in K8s module which is updated recently by SPARK-33471.

### Why are the changes needed?

According to [HADOOP-16080](https://issues.apache.org/jira/browse/HADOOP-16080) since Apache Hadoop 3.1.1, `hadoop-aws` doesn't work with `hadoop-client-api`. It fails at write operation like the following.

**1. Spark distribution with `-Phadoop-cloud`**

```scala
$ bin/spark-shell --conf spark.hadoop.fs.s3a.access.key=$AWS_ACCESS_KEY_ID --conf spark.hadoop.fs.s3a.secret.key=$AWS_SECRET_ACCESS_KEY
20/11/30 23:01:24 WARN NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
Using Spark's default log4j profile: org/apache/spark/log4j-defaults.properties
Setting default log level to "WARN".
To adjust logging level use sc.setLogLevel(newLevel). For SparkR, use setLogLevel(newLevel).
Spark context available as 'sc' (master = local[*], app id = local-1606806088715).
Spark session available as 'spark'.
Welcome to
      ____              __
     / __/__  ___ _____/ /__
    _\ \/ _ \/ _ `/ __/  '_/
   /___/ .__/\_,_/_/ /_/\_\   version 3.1.0-SNAPSHOT
      /_/

Using Scala version 2.12.10 (OpenJDK 64-Bit Server VM, Java 1.8.0_272)
Type in expressions to have them evaluated.
Type :help for more information.

scala> spark.read.parquet("s3a://dongjoon/users.parquet").show
20/11/30 23:01:34 WARN MetricsConfig: Cannot locate configuration: tried hadoop-metrics2-s3a-file-system.properties,hadoop-metrics2.properties
+------+--------------+----------------+
|  name|favorite_color|favorite_numbers|
+------+--------------+----------------+
|Alyssa|          null|  [3, 9, 15, 20]|
|   Ben|           red|              []|
+------+--------------+----------------+

scala> Seq(1).toDF.write.parquet("s3a://dongjoon/out.parquet")
20/11/30 23:02:14 ERROR Executor: Exception in task 0.0 in stage 2.0 (TID 2)/ 1]
java.lang.NoSuchMethodError: org.apache.hadoop.util.SemaphoredDelegatingExecutor.<init>(Lcom/google/common/util/concurrent/ListeningExecutorService;IZ)V
```

**2. Spark distribution without `-Phadoop-cloud`**
```scala
$ bin/spark-shell --conf spark.hadoop.fs.s3a.access.key=$AWS_ACCESS_KEY_ID --conf spark.hadoop.fs.s3a.secret.key=$AWS_SECRET_ACCESS_KEY -c spark.eventLog.enabled=true -c spark.eventLog.dir=s3a://dongjoon/spark-events/ --packages org.apache.hadoop:hadoop-aws:3.2.0,org.apache.hadoop:hadoop-common:3.2.0
...
java.lang.NoSuchMethodError: org.apache.hadoop.util.SemaphoredDelegatingExecutor.<init>(Lcom/google/common/util/concurrent/ListeningExecutorService;IZ)V
  at org.apache.hadoop.fs.s3a.S3AFileSystem.create(S3AFileSystem.java:772)
```

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the CI.

Closes #30508 from dongjoon-hyun/SPARK-33212-REVERT.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-12-02 18:23:48 +09:00
Josh Soref 485145326a [MINOR] Spelling bin core docs external mllib repl
### What changes were proposed in this pull request?

This PR intends to fix typos in the sub-modules:
* `bin`
* `core`
* `docs`
* `external`
* `mllib`
* `repl`
* `pom.xml`

Split per srowen https://github.com/apache/spark/pull/30323#issuecomment-728981618

NOTE: The misspellings have been reported at 706a726f87 (commitcomment-44064356)

### Why are the changes needed?

Misspelled words make it harder to read / understand content.

### Does this PR introduce _any_ user-facing change?

There are various fixes to documentation, etc...

### How was this patch tested?

No testing was performed

Closes #30530 from jsoref/spelling-bin-core-docs-external-mllib-repl.

Authored-by: Josh Soref <jsoref@users.noreply.github.com>
Signed-off-by: Takeshi Yamamuro <yamamuro@apache.org>
2020-11-30 13:59:51 +09:00
Yuming Wang 1de3fc4282 [SPARK-33525][SQL] Update hive-service-rpc to 3.1.2
### What changes were proposed in this pull request?

We supported Hive metastore are 0.12.0 through 3.1.2, but we supported hive-jdbc are 0.12.0 through 2.3.7. It will throw `TProtocolException` if we use hive-jdbc 3.x:

```
[rootspark-3267648 apache-hive-3.1.2-bin]# bin/beeline -u jdbc:hive2://localhost:10000/default
Connecting to jdbc:hive2://localhost:10000/default
Connected to: Spark SQL (version 3.1.0-SNAPSHOT)
Driver: Hive JDBC (version 3.1.2)
Transaction isolation: TRANSACTION_REPEATABLE_READ
Beeline version 3.1.2 by Apache Hive
0: jdbc:hive2://localhost:10000/default> create table t1(id int) using parquet;
Unexpected end of file when reading from HS2 server. The root cause might be too many concurrent connections. Please ask the administrator to check the number of active connections, and adjust hive.server2.thrift.max.worker.threads if applicable.
Error: org.apache.thrift.transport.TTransportException (state=08S01,code=0)
```
```
org.apache.thrift.protocol.TProtocolException: Missing version in readMessageBegin, old client?
	at org.apache.thrift.protocol.TBinaryProtocol.readMessageBegin(TBinaryProtocol.java:234)
	at org.apache.thrift.TBaseProcessor.process(TBaseProcessor.java:27)
	at org.apache.hive.service.auth.TSetIpAddressProcessor.process(TSetIpAddressProcessor.java:53)
	at org.apache.thrift.server.TThreadPoolServer$WorkerProcess.run(TThreadPoolServer.java:310)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1130)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:630)
	at java.base/java.lang.Thread.run(Thread.java:832)
```

This pr upgrade hive-service-rpc to 3.1.2 to fix this issue.

### Why are the changes needed?

To support hive-jdbc 3.x.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Manual test:
```
[rootspark-3267648 apache-hive-3.1.2-bin]# bin/beeline -u jdbc:hive2://localhost:10000/default
Connecting to jdbc:hive2://localhost:10000/default
Connected to: Spark SQL (version 3.1.0-SNAPSHOT)
Driver: Hive JDBC (version 3.1.2)
Transaction isolation: TRANSACTION_REPEATABLE_READ
Beeline version 3.1.2 by Apache Hive
0: jdbc:hive2://localhost:10000/default> create table t1(id int) using parquet;
+---------+
| Result  |
+---------+
+---------+
No rows selected (1.051 seconds)
0: jdbc:hive2://localhost:10000/default> insert into t1 values(1);
+---------+
| Result  |
+---------+
+---------+
No rows selected (2.08 seconds)
0: jdbc:hive2://localhost:10000/default> select * from t1;
+-----+
| id  |
+-----+
| 1   |
+-----+
1 row selected (0.605 seconds)
```

Closes #30478 from wangyum/SPARK-33525.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-11-25 12:37:59 -08:00
Dongjoon Hyun 3ce4ab545b
[SPARK-33513][BUILD] Upgrade to Scala 2.13.4 to improve exhaustivity
### What changes were proposed in this pull request?

This PR aims the followings.
1. Upgrade from Scala 2.13.3 to 2.13.4 for Apache Spark 3.1
2. Fix exhaustivity issues in both Scala 2.12/2.13 (Scala 2.13.4 requires this for compilation.)
3. Enforce the improved exhaustive check by using the existing Scala 2.13 GitHub Action compilation job.

### Why are the changes needed?

Scala 2.13.4 is a maintenance release for 2.13 line and improves JDK 15 support.
- https://github.com/scala/scala/releases/tag/v2.13.4

Also, it improves exhaustivity check.
- https://github.com/scala/scala/pull/9140 (Check exhaustivity of pattern matches with "if" guards and custom extractors)
- https://github.com/scala/scala/pull/9147 (Check all bindings exhaustively, e.g. tuples components)

### Does this PR introduce _any_ user-facing change?

Yep. Although it's a maintenance version change, it's a Scala version change.

### How was this patch tested?

Pass the CIs and do the manual testing.
- Scala 2.12 CI jobs(GitHub Action/Jenkins UT/Jenkins K8s IT) to check the validity of code change.
- Scala 2.13 Compilation job to check the compilation

Closes #30455 from dongjoon-hyun/SCALA_3.13.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-11-23 16:28:43 -08:00
Dongjoon Hyun df4a1c2256
[SPARK-33512][BUILD] Upgrade test libraries
### What changes were proposed in this pull request?

This PR aims to update the test libraries.
- ScalaTest: 3.2.0 -> 3.2.3
- JUnit: 4.12 -> 4.13.1
- Mockito: 3.1.0 -> 3.4.6
- JMock: 2.8.4 -> 2.12.0
- maven-surefire-plugin: 3.0.0-M3 -> 3.0.0-M5
- scala-maven-plugin: 4.3.0 -> 4.4.0

### Why are the changes needed?

This will make the test frameworks up-to-date for Apache Spark 3.1.0.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the CIs.

Closes #30456 from dongjoon-hyun/SPARK-33512.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-11-22 16:40:54 -08:00
yangjie01 2289389821 [SPARK-33441][BUILD][FOLLOWUP] Make unused-imports check for SBT specific
### What changes were proposed in this pull request?
Move "unused-imports" check config to `SparkBuild.scala` and make it SBT specific.

### Why are the changes needed?
Make unused-imports check for SBT specific.

### Does this PR introduce _any_ user-facing change?
No

### How was this patch tested?
Pass the Jenkins or GitHub Action

Closes #30441 from LuciferYang/SPARK-33441-FOLLOWUP.

Authored-by: yangjie01 <yangjie01@baidu.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-11-20 21:27:41 +09:00
yangjie01 e3058ba17c [SPARK-33441][BUILD] Add unused-imports compilation check and remove all unused-imports
### What changes were proposed in this pull request?
This pr add a new Scala compile arg to `pom.xml` to defense against new unused imports:

- `-Ywarn-unused-import` for Scala 2.12
- `-Wconf:cat=unused-imports:e` for Scala 2.13

The other fIles change are remove all unused imports in Spark code

### Why are the changes needed?
Cleanup code and add guarantee to defense against new unused imports

### Does this PR introduce _any_ user-facing change?
No

### How was this patch tested?
Pass the Jenkins or GitHub Action

Closes #30351 from LuciferYang/remove-imports-core-module.

Authored-by: yangjie01 <yangjie01@baidu.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-11-19 14:20:39 +09:00
Takeshi Yamamuro 74bd046d17 [SPARK-33475][BUILD] Bump ANTLR runtime version to 4.8-1
### What changes were proposed in this pull request?

This PR intends to upgrade ANTLR runtime from 4.7.1 to 4.8-1.

### Why are the changes needed?

Release note of v4.8 and v4.7.2 (the v4.7.2 release has a few minor bug fixes for java targets):
 - v4.8: https://github.com/antlr/antlr4/releases/tag/4.8
 - v4.7.2: https://github.com/antlr/antlr4/releases/tag/4.7.2

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

GA tests.

Closes #30404 from maropu/UpgradeAntlr.

Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-11-18 21:20:28 +09:00
Chao Sun c2caf2522b [SPARK-33213][BUILD] Upgrade Apache Arrow to 2.0.0
### What changes were proposed in this pull request?

This upgrade Apache Arrow version from 1.0.1 to 2.0.0

### Why are the changes needed?

Apache Arrow 2.0.0 was released with some improvements from Java side, so it's better to upgrade Spark to the new version.
Note that the format version in Arrow 2.0.0 is still 1.0.0 so API should still be compatible between 1.0.1 and 2.0.0.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Existing UTs.

Closes #30306 from sunchao/SPARK-33213.

Authored-by: Chao Sun <sunchao@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-11-09 19:07:16 -08:00
Dongjoon Hyun 35ac314181 [SPARK-33405][BUILD] Upgrade commons-compress to 1.20
### What changes were proposed in this pull request?

This PR aims to upgrade `commons-compress` from 1.8 to 1.20.

### Why are the changes needed?

- https://commons.apache.org/proper/commons-compress/security-reports.html

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the CIs.

Closes #30304 from dongjoon-hyun/SPARK-33405.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-11-10 11:08:55 +09:00
huangtianhua 83a80796aa [SPARK-32691][BUILD] Update commons-crypto to v1.1.0
### What changes were proposed in this pull request?
Update the package commons-crypto to v1.1.0 to support aarch64 platform
- https://issues.apache.org/jira/browse/CRYPTO-139

### Why are the changes needed?

The package commons-crypto-1.0.0 available in the Maven repository
doesn't support aarch64 platform. It costs long time in
CryptoRandomFactory.getCryptoRandom(properties).nextBytes(iv) when NettyBlockRpcSever
receive block data from client,  if the time more than the default value 120s, IOException raised and client
will retry replicate the block data to other executors. But in fact the replication is complete,
it makes the replication number incorrect.
This makes DistributedSuite tests pass.

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
Pass the CIs.

Closes #30275 from huangtianhua/SPARK-32691.

Authored-by: huangtianhua <huangtianhua223@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-11-09 14:33:27 -08:00
Kousuke Saruta d24dbe8955 [SPARK-33343][BUILD] Fix the build with sbt to copy hadoop-client-runtime.jar
### What changes were proposed in this pull request?

This PR fix the issue that spark-shell doesn't work if it's built with `sbt package` (without any profiles specified).
It's due to hadoop-client-runtime.jar isn't copied to assembly/target/scala-2.12/jars.
```
$ bin/spark-shell
Exception in thread "main" java.lang.NoClassDefFoundError: org/apache/hadoop/shaded/com/ctc/wstx/io/InputBootstrapper
	at org.apache.spark.deploy.SparkHadoopUtil$.newConfiguration(SparkHadoopUtil.scala:426)
	at org.apache.spark.deploy.SparkSubmit.$anonfun$prepareSubmitEnvironment$2(SparkSubmit.scala:342)
	at scala.Option.getOrElse(Option.scala:189)
	at org.apache.spark.deploy.SparkSubmit.prepareSubmitEnvironment(SparkSubmit.scala:342)
	at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:877)
	at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:180)
	at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:203)
	at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:90)
	at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:1013)
	at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:1022)
	at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.lang.ClassNotFoundException: org.apache.hadoop.shaded.com.ctc.wstx.io.InputBootstrapper
	at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:418)
	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:352)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:351)
```

### Why are the changes needed?

This is a bug.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Ran spark-shell and confirmed it works.

Closes #30250 from sarutak/copy-runtime-sbt.

Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-11-04 15:05:35 -08:00
HyukjinKwon 10bd42cd47 [SPARK-33104][BUILD] Exclude 'org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests'
### What changes were proposed in this pull request?

This PR proposes to exclude `org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests` from `hadoop-yarn-server-tests` when we use Hadoop 2 profile.

For some reasons, after SBT 1.3 upgrade at SPARK-21708, SBT starts to pull the dependencies of 'hadoop-yarn-server-tests'  with 'tests' classifier:

```
org/apache/hadoop/hadoop-common/2.7.4/hadoop-common-2.7.4-tests.jar
org/apache/hadoop/hadoop-yarn-common/2.7.4/hadoop-yarn-common-2.7.4-tests.jar
org/apache/hadoop/hadoop-yarn-server-resourcemanager/2.7.4/hadoop-yarn-server-resourcemanager-2.7.4-tests.jar
```
these were not pulled before the upgrade.

This specific `hadoop-yarn-server-resourcemanager-2.7.4-tests.jar` causes the problem (SPARK-33104)

1. When the test case creates the Hadoop configuration here,
    cc06266ade/core/src/main/scala/org/apache/spark/deploy/SparkHadoopUtil.scala (L122)

2. Such jars above have higher precedence in the class path, instead of the specified custom `core-site.xml` in the test:

    e93b8f02cd/resource-managers/yarn/src/main/scala/org/apache/spark/deploy/yarn/Client.scala (L1375)

3. Later, `core-site.xml` in the jar is picked instead in Hadoop's `Configuration`:

    Before this fix:

    ```
    jar:file:/.../https/maven-central.storage-download.googleapis.com/maven2/org/apache/hadoop/
    hadoop-yarn-server-resourcemanager/2.7.4/hadoop-yarn-server-resourcemanager-2.7.4-tests.jar!/core-site.xml
    ```

    After this fix:

    ```
    file:/.../spark/resource-managers/yarn/target/org.apache.spark.deploy.yarn.YarnClusterSuite/
    org.apache.spark.deploy.yarn.YarnClusterSuite-localDir-nm-0_0/
    usercache/.../filecache/10/__spark_conf__.zip/__hadoop_conf__/core-site.xml
    ```

4. the `core-site.xml` in the jar of course does not contain:

    2cfd215dc4/resource-managers/yarn/src/test/scala/org/apache/spark/deploy/yarn/YarnClusterSuite.scala (L133-L141)

    and the specific test fails.

This PR uses some kind of hacky approach. It was excluded from  'hadoop-yarn-server-tests'  with 'tests' classifier, and then added back as a proper dependency (when Hadoop 2 profile is used). In this way, SBT does not pull `hadoop-yarn-server-resourcemanager` with `tests` classifier anymore.

### Why are the changes needed?

To make the build pass. This is a blocker.

### Does this PR introduce _any_ user-facing change?

No, test-only.

### How was this patch tested?

Manually tested and debugged:

```bash
build/sbt clean "yarn/testOnly *.YarnClusterSuite -- -z SparkHadoopUtil" -Pyarn -Phadoop-2.7 -Phive -Phive-2.3
```

Closes #30133 from HyukjinKwon/SPARK-33104.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-10-23 19:19:02 +09:00
Chao Sun cb3fa6c936 [SPARK-33212][BUILD] Move to shaded clients for Hadoop 3.x profile
### What changes were proposed in this pull request?

This switches Spark to use shaded Hadoop clients, namely hadoop-client-api and hadoop-client-runtime, for Hadoop 3.x. For Hadoop 2.7, we'll still use the same modules such as hadoop-client.

In order to still keep default Hadoop profile to be hadoop-3.2, this defines the following Maven properties:

```
hadoop-client-api.artifact
hadoop-client-runtime.artifact
hadoop-client-minicluster.artifact
```

which default to:
```
hadoop-client-api
hadoop-client-runtime
hadoop-client-minicluster
```
but all switch to `hadoop-client` when the Hadoop profile is hadoop-2.7. A side affect from this is we'll import the same dependency multiple times. For this I have to disable Maven enforcer `banDuplicatePomDependencyVersions`.

Besides above, there are the following changes:
- explicitly add a few dependencies which are imported via transitive dependencies from Hadoop jars, but are removed from the shaded client jars.
- removed the use of `ProxyUriUtils.getPath` from `ApplicationMaster` which is a server-side/private API.
- modified `IsolatedClientLoader` to exclude `hadoop-auth` jars when Hadoop version is 3.x. This change should only matter when we're not sharing Hadoop classes with Spark (which is _mostly_ used in tests).

### Why are the changes needed?

This serves two purposes:
- to unblock Spark from upgrading to Hadoop 3.2.2/3.3.0+. Latest Hadoop versions have upgraded to use Guava 27+ and in order to adopt the latest Hadoop versions in Spark, we'll need to resolve the Guava conflicts. This takes the approach by switching to shaded client jars provided by Hadoop.
- avoid pulling 3rd party dependencies from Hadoop and avoid potential future conflicts.

### Does this PR introduce _any_ user-facing change?

When people use Spark with `hadoop-provided` option, they should make sure class path contains `hadoop-client-api` and `hadoop-client-runtime` jars. In addition, they may need to make sure these jars appear before other Hadoop jars in the order. Otherwise, classes may be loaded from the other non-shaded Hadoop jars and cause potential conflicts.

### How was this patch tested?

Relying on existing tests.

Closes #29843 from sunchao/SPARK-29250.

Authored-by: Chao Sun <sunchao@apple.com>
Signed-off-by: DB Tsai <d_tsai@apple.com>
2020-10-22 03:21:34 +00:00
Takeshi Yamamuro 1b7367ccd7 [SPARK-33205][BUILD] Bump snappy-java version to 1.1.8
### What changes were proposed in this pull request?

This PR intends to upgrade snappy-java from 1.1.7.5 to 1.1.8.

### Why are the changes needed?

For performance improvements; the released `snappy-java` bundles the latest `Snappy` v1.1.8 binaries with small performance improvements.
 - snappy-java release note: https://github.com/xerial/snappy-java/releases/tag/1.1.8
 - snappy release note: https://github.com/google/snappy/releases/tag/1.1.8

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

GA tests.

Closes #30120 from maropu/Snappy1.1.8.

Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: Liang-Chi Hsieh <viirya@gmail.com>
2020-10-21 13:04:39 -07:00
Kent Yao 2507301705 [SPARK-33159][SQL] Use hive-service-rpc as dependency instead of inlining the generated code
### What changes were proposed in this pull request?

Hive's `hive-service-rpc` module started since hive-2.1.0 and it contains only the thrift IDL file and the code generated by it.

Removing the inlined code will help maintain and upgrade builtin hive versions

### Why are the changes needed?

to simply the code.

### Does this PR introduce _any_ user-facing change?

no

### How was this patch tested?

passing CI

Closes #30055 from yaooqinn/SPARK-33159.

Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-10-16 09:37:54 -07:00
Dongjoon Hyun 9896288b88 [SPARK-33117][BUILD] Update zstd-jni to 1.4.5-6
### What changes were proposed in this pull request?

This PR aims to upgrade ZStandard library for Apache Spark 3.1.0.

### Why are the changes needed?

This will bring the latest bug fixes.
- 2662fbdc32
- bbe140b758

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the CI.

Closes #30010 from dongjoon-hyun/SPARK-33117.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-10-12 00:27:53 -07:00
Yuming Wang 543d59dfbf [SPARK-33107][BUILD][FOLLOW-UP] Remove com.twitter:parquet-hadoop-bundle:1.6.0 and orc.classifier
### What changes were proposed in this pull request?

This pr removes `com.twitter:parquet-hadoop-bundle:1.6.0` and `orc.classifier`.

### Why are the changes needed?

To make code more clear and readable.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Existing test.

Closes #30005 from wangyum/SPARK-33107.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-10-11 21:54:56 -07:00
Dongjoon Hyun 008a2ad1f8 [SPARK-20202][BUILD][SQL] Remove references to org.spark-project.hive (Hive 1.2.1)
### What changes were proposed in this pull request?

As of today,
- SPARK-30034 Apache Spark 3.0.0 switched its default Hive execution engine from Hive 1.2 to Hive 2.3. This removes the direct dependency to the forked Hive 1.2.1 in maven repository.
- SPARK-32981 Apache Spark 3.1.0(`master` branch) removed Hive 1.2 related artifacts from Apache Spark binary distributions.

This PR(SPARK-20202) aims to remove the following usage of unofficial Apache Hive fork completely from Apache Spark master for Apache Spark 3.1.0.
```
<hive.group>org.spark-project.hive</hive.group>
<hive.version>1.2.1.spark2</hive.version>
```

For the forked Hive 1.2.1.spark2 users, Apache Spark 2.4(LTS) and 3.0 (~ 2021.12) will provide it.

### Why are the changes needed?

- First, Apache Spark community should not use the unofficial forked release of another Apache project.
- Second, Apache Hive 1.2.1 was released at 2015-06-26 and the forked Hive `1.2.1.spark2` exposed many unfixable bugs in Apache because the forked `1.2.1.spark2` is not maintained at all. Apache Hive 2.3.0 was released at 2017-07-19 and it has been used with less number of bugs compared with `1.2.1.spark2`. Many bugs still exist in `hive-1.2` profile and new Apache Spark unit tests are added with `HiveUtils.isHive23` condition so far.

### Does this PR introduce _any_ user-facing change?

No. This is a dev-only change. PRBuilder will not accept `[test-hive1.2]` on master and `branch-3.1`.

### How was this patch tested?

1. SBT/Hadoop 3.2/Hive 2.3 (https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/129366)
2. SBT/Hadoop 2.7/Hive 2.3 (https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/129382)
3. SBT/Hadoop 3.2/Hive 1.2 (This has not been supported already due to Hive 1.2 doesn't work with Hadoop 3.2.)
4. SBT/Hadoop 2.7/Hive 1.2 (https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/129383, This is rejected)

Closes #29936 from dongjoon-hyun/SPARK-REMOVE-HIVE1.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-10-05 15:29:56 -07:00
Dongjoon Hyun aa6657981a [SPARK-33050][BUILD] Upgrade Apache ORC to 1.5.12
### What changes were proposed in this pull request?

This PR aims to upgrade Apache ORC to 1.5.12.

### Why are the changes needed?

This brings us the latest bug patches like the followings.
- ORC-644 nested struct evolution does not respect to orc.force.positional.evolution
- ORC-667 Positional mapping for nested struct types should not applied by default

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the CI.

Closes #29930 from dongjoon-hyun/SPARK-ORC-1.5.12.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-10-02 00:06:03 -07:00
Dongjoon Hyun 9c618b3308 [SPARK-33047][BUILD] Upgrade hive-storage-api to 2.7.2
### What changes were proposed in this pull request?

This PR aims to upgrade Apache Hive `hive-storage-api` library from 2.7.1 to 2.7.2.

### Why are the changes needed?

[storage-api 2.7.2](https://github.com/apache/hive/commits/rel/storage-release-2.7.2/storage-api) has the following extension and can be used when users uses a provided orc dependency.

[HIVE-22959](dade9919d9 (diff-ccfc9dd7584117f531322cda3a29f3c3)) : Extend storage-api to expose FilterContext
[HIVE-23215](361925d2f3 (diff-ccfc9dd7584117f531322cda3a29f3c3)) : Make FilterContext and MutableFilterContext interfaces

### Does this PR introduce _any_ user-facing change?

Yes. This is a dependency change.

### How was this patch tested?

Pass the existing tests.

Closes #29923 from dongjoon-hyun/SPARK-33047.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-10-01 12:41:40 -07:00
Bryan Cutler e0538bd38c [SPARK-32312][SQL][PYTHON][TEST-JAVA11] Upgrade Apache Arrow to version 1.0.1
### What changes were proposed in this pull request?

Upgrade Apache Arrow to version 1.0.1 for the Java dependency and increase minimum version of PyArrow to 1.0.0.

This release marks a transition to binary stability of the columnar format (which was already informally backward-compatible going back to December 2017) and a transition to Semantic Versioning for the Arrow software libraries. Also note that the Java arrow-memory artifact has been split to separate dependence on netty-buffer and allow users to select an allocator. Spark will continue to use `arrow-memory-netty` to maintain performance benefits.

Version 1.0.0 - 1.0.0 include the following selected fixes/improvements relevant to Spark users:

ARROW-9300 - [Java] Separate Netty Memory to its own module
ARROW-9272 - [C++][Python] Reduce complexity in python to arrow conversion
ARROW-9016 - [Java] Remove direct references to Netty/Unsafe Allocators
ARROW-8664 - [Java] Add skip null check to all Vector types
ARROW-8485 - [Integration][Java] Implement extension types integration
ARROW-8434 - [C++] Ipc RecordBatchFileReader deserializes the Schema multiple times
ARROW-8314 - [Python] Provide a method to select a subset of columns of a Table
ARROW-8230 - [Java] Move Netty memory manager into a separate module
ARROW-8229 - [Java] Move ArrowBuf into the Arrow package
ARROW-7955 - [Java] Support large buffer for file/stream IPC
ARROW-7831 - [Java] unnecessary buffer allocation when calling splitAndTransferTo on variable width vectors
ARROW-6111 - [Java] Support LargeVarChar and LargeBinary types and add integration test with C++
ARROW-6110 - [Java] Support LargeList Type and add integration test with C++
ARROW-5760 - [C++] Optimize Take implementation
ARROW-300 - [Format] Add body buffer compression option to IPC message protocol using LZ4 or ZSTD
ARROW-9098 - RecordBatch::ToStructArray cannot handle record batches with 0 column
ARROW-9066 - [Python] Raise correct error in isnull()
ARROW-9223 - [Python] Fix to_pandas() export for timestamps within structs
ARROW-9195 - [Java] Wrong usage of Unsafe.get from bytearray in ByteFunctionsHelper class
ARROW-7610 - [Java] Finish support for 64 bit int allocations
ARROW-8115 - [Python] Conversion when mixing NaT and datetime objects not working
ARROW-8392 - [Java] Fix overflow related corner cases for vector value comparison
ARROW-8537 - [C++] Performance regression from ARROW-8523
ARROW-8803 - [Java] Row count should be set before loading buffers in VectorLoader
ARROW-8911 - [C++] Slicing a ChunkedArray with zero chunks segfaults

View release notes here:
https://arrow.apache.org/release/1.0.1.html
https://arrow.apache.org/release/1.0.0.html

### Why are the changes needed?

Upgrade brings fixes, improvements and stability guarantees.

### Does this PR introduce _any_ user-facing change?

No

### How was this patch tested?

Existing tests with pyarrow 1.0.0 and 1.0.1

Closes #29686 from BryanCutler/arrow-upgrade-100-SPARK-32312.

Authored-by: Bryan Cutler <cutlerb@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-09-10 14:16:19 +09:00
Sean Owen a9d4e60a90 [SPARK-32614][SQL] Don't apply comment processing if 'comment' unset for CSV
### What changes were proposed in this pull request?

Spark's CSV source can optionally ignore lines starting with a comment char. Some code paths check to see if it's set before applying comment logic (i.e. not set to default of `\0`), but many do not, including the one that passes the option to Univocity. This means that rows beginning with a null char were being treated as comments even when 'disabled'.

### Why are the changes needed?

To avoid dropping rows that start with a null char when this is not requested or intended. See JIRA for an example.

### Does this PR introduce _any_ user-facing change?

Nothing beyond the effect of the bug fix.

### How was this patch tested?

Existing tests plus new test case.

Closes #29516 from srowen/SPARK-32614.

Authored-by: Sean Owen <srowen@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-08-26 00:25:58 +09:00
Wenchen Fan 8b119f1663 [SPARK-32640][SQL] Downgrade Janino to fix a correctness bug
### What changes were proposed in this pull request?

This PR reverts https://github.com/apache/spark/pull/27860 to downgrade Janino, as the new version has a bug.

### Why are the changes needed?

The symptom is about NaN comparison. For code below
```
if (double_value <= 0.0) {
  ...
} else {
  ...
}
```

If `double_value` is NaN, `NaN <= 0.0` is false and we should go to the else branch. However, current Spark goes to the if branch and causes correctness issues like SPARK-32640.

One way to fix it is:
```
boolean cond = double_value <= 0.0;
if (cond) {
  ...
} else {
  ...
}
```

I'm not familiar with Janino so I don't know what's going on there.

### Does this PR introduce _any_ user-facing change?

Yes, fix correctness bugs.

### How was this patch tested?

a new test

Closes #29495 from cloud-fan/revert.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-08-20 13:26:39 -07:00
Kousuke Saruta 9a79bbc8b6 [SPARK-32610][DOCS] Fix the link to metrics.dropwizard.io in monitoring.md to refer the proper version
### What changes were proposed in this pull request?

This PR fixes the link to metrics.dropwizard.io in monitoring.md to refer the proper version of the library.

### Why are the changes needed?

There are links to metrics.dropwizard.io in monitoring.md but the link targets refer the version 3.1.0, while we use 4.1.1.
Now that users can create their own metrics using the dropwizard library, it's better to fix the links to refer the proper version.

### Does this PR introduce _any_ user-facing change?

Yes. The modified links refer the version 4.1.1.

### How was this patch tested?

Build the docs and visit all the modified links.

Closes #29426 from sarutak/fix-dropwizard-url.

Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-08-16 12:07:37 -05:00
Dongjoon Hyun eb74d55fb5 [SPARK-32568][BUILD][SS] Upgrade Kafka to 2.6.0
### What changes were proposed in this pull request?

This PR aims to update Kafka client library to 2.6.0 for Apache Spark 3.1.0.

### Why are the changes needed?

This will bring client-side bug fixes like KAFKA-10134 and KAFKA-10223.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the existing tests.

Closes #29386 from dongjoon-hyun/SPARK-32568.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-08-08 10:31:36 +09:00
yangjie01 0693d8bbf2 [SPARK-32490][BUILD] Upgrade netty-all to 4.1.51.Final
### What changes were proposed in this pull request?
This PR aims to bring the bug fixes from the latest netty version.

### Why are the changes needed?
- 4.1.48.Final: [https://github.com/netty/netty/milestone/223?closed=1](https://github.com/netty/netty/milestone/223?closed=1)(14 patches or issues)
- 4.1.49.Final: [https://github.com/netty/netty/milestone/224?closed=1](https://github.com/netty/netty/milestone/224?closed=1)(48 patches or issues)
- 4.1.50.Final: [https://github.com/netty/netty/milestone/225?closed=1](https://github.com/netty/netty/milestone/225?closed=1)(38 patches or issues)
- 4.1.51.Final: [https://github.com/netty/netty/milestone/226?closed=1](https://github.com/netty/netty/milestone/226?closed=1)(53 patches or issues)

### Does this PR introduce _any_ user-facing change?
No

### How was this patch tested?
Pass the Jenkins with the existing tests.

Closes #29299 from LuciferYang/upgrade-netty-version.

Authored-by: yangjie01 <yangjie01@baidu.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-08-02 16:46:11 -07:00
Holden Karau 50911df08e [SPARK-32397][BUILD] Allow specifying of time for build to keep time consistent between modules
### What changes were proposed in this pull request?

Upgrade codehaus maven build helper to allow people to specify a time during the build to avoid snapshot artifacts with different version strings.

### Why are the changes needed?

During builds of snapshots the maven may assign different versions to different artifacts based on the time each individual sub-module starts building.

The timestamp is used as part of the version string when run `maven deploy` on a snapshot build. This results in different sub-modules having different version strings.

### Does this PR introduce _any_ user-facing change?

No

### How was this patch tested?

Manual build while specifying the current time, ensured the time is consistent in the sub components.

Open question: Ideally I'd like to backport this as well since it's sort of a bug fix and while it does change a dependency version it's not one that is propagated. I'd like to hear folks thoughts about this.

Closes #29274 from holdenk/SPARK-32397-snapshot-artifact-timestamp-differences.

Authored-by: Holden Karau <hkarau@apple.com>
Signed-off-by: DB Tsai <d_tsai@apple.com>
2020-07-29 21:39:14 +00:00
Dongjoon Hyun 13c64c2980 [SPARK-32448][K8S][TESTS] Use single version for exec-maven-plugin/scalatest-maven-plugin
### What changes were proposed in this pull request?

Two different versions are used for the same artifacts, `exec-maven-plugin` and `scalatest-maven-plugin`. This PR aims to use the same versions for `exec-maven-plugin` and `scalatest-maven-plugin`. In addition, this PR removes `scala-maven-plugin.version` from `K8s` integration suite because it's unused.

### Why are the changes needed?

This will prevent the mistake which upgrades only one place and forgets the others.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the Jenkins K8S IT.

Closes #29248 from dongjoon-hyun/SPARK-32448.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-07-26 19:25:41 -07:00
Dongjoon Hyun 83ffef7ffb [SPARK-32441][BUILD][CORE] Update json4s to 3.7.0-M5 for Scala 2.13
### What changes were proposed in this pull request?

This PR aims to upgrade `json4s` to from 3.6.6 to 3.7.0-M5 for Scala 2.13 support at Apache Spark 3.1.0 on December. We will upgrade to the latest `json4s` around November.

### Why are the changes needed?

`json4s` starts to support Scala 2.13 since v3.7.0-M4.
- https://github.com/json4s/json4s/issues/660
- b013af8e75

Old `json4s` causes many UT failures with `NoSuchMethodException`.
```scala
 Cause: java.lang.NoSuchMethodException: scala.collection.immutable.Seq$.apply(scala.collection.Seq)
  at java.lang.Class.getMethod(Class.java:1786)
```

The following is one example.
```scala
$ dev/change-scala-version.sh 2.13
$ build/mvn test -pl core --am -Pscala-2.13 -Dtest=none -DwildcardSuites=org.apache.spark.executor.CoarseGrainedExecutorBackendSuite
...
Tests: succeeded 4, failed 9, canceled 0, ignored 0, pending 0
*** 9 TESTS FAILED ***
```

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

1. **Scala 2.12**: Pass the Jenkins or GitHub Action with the existing tests.
2. **Scala 2.13**: Do the following manually at least.
```scala
$ dev/change-scala-version.sh 2.13
$ build/mvn test -pl core --am -Pscala-2.13 -Dtest=none -DwildcardSuites=org.apache.spark.executor.CoarseGrainedExecutorBackendSuite
...
Tests: succeeded 13, failed 0, canceled 0, ignored 0, pending 0
All tests passed.
```

Closes #29239 from dongjoon-hyun/SPARK-32441.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-07-25 20:34:31 -07:00
Dongjoon Hyun f642234d85 [SPARK-32437][CORE] Improve MapStatus deserialization speed with RoaringBitmap 0.9.0
### What changes were proposed in this pull request?

This PR aims to speed up `MapStatus` deserialization by 5~18% with the latest RoaringBitmap `0.9.0` and new APIs. Note that we focus on `deserialization` time because `serialization` occurs once while `deserialization` occurs many times.

### Why are the changes needed?

The current version is too old. We had better upgrade it to get the performance improvement and bug fixes.
Although `MapStatusesSerDeserBenchmark` is synthetic, the benchmark result is updated with this patch.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the Jenkins or GitHub Action.

Closes #29233 from dongjoon-hyun/SPARK-ROAR.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-07-25 08:07:28 -07:00
Sean Owen be2eca22e9 [SPARK-32398][TESTS][CORE][STREAMING][SQL][ML] Update to scalatest 3.2.0 for Scala 2.13.3+
### What changes were proposed in this pull request?

Updates to scalatest 3.2.0. Though it looks large, it is 99% changes to the new location of scalatest classes.

### Why are the changes needed?

3.2.0+ has a fix that is required for Scala 2.13.3+ compatibility.

### Does this PR introduce _any_ user-facing change?

No, only affects tests.

### How was this patch tested?

Existing tests.

Closes #29196 from srowen/SPARK-32398.

Authored-by: Sean Owen <srowen@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-07-23 16:20:17 -07:00