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4852 commits

Author SHA1 Message Date
Liang-Chi Hsieh d0bc3ed679
[SPARK-24896][SQL] Uuid should produce different values for each execution in streaming query
## What changes were proposed in this pull request?

`Uuid`'s results depend on random seed given during analysis. Thus under streaming query, we will have the same uuids in each execution. This seems to be incorrect for streaming query execution.

## How was this patch tested?

Added test.

Author: Liang-Chi Hsieh <viirya@gmail.com>

Closes #21854 from viirya/uuid_in_streaming.
2018-08-02 15:35:46 -07:00
Takeshi Yamamuro efef55388f [SPARK-24705][SQL] ExchangeCoordinator broken when duplicate exchanges reused
## What changes were proposed in this pull request?
In the current master, `EnsureRequirements` sets the number of exchanges in `ExchangeCoordinator` before `ReuseExchange`. Then, `ReuseExchange` removes some duplicate exchange and the actual number of registered exchanges changes. Finally, the assertion in `ExchangeCoordinator` fails because the logical number of exchanges and the actual number of registered exchanges become different;
https://github.com/apache/spark/blob/master/sql/core/src/main/scala/org/apache/spark/sql/execution/exchange/ExchangeCoordinator.scala#L201

This pr fixed the issue and the code to reproduce this is as follows;
```
scala> sql("SET spark.sql.adaptive.enabled=true")
scala> sql("SET spark.sql.autoBroadcastJoinThreshold=-1")
scala> val df = spark.range(1).selectExpr("id AS key", "id AS value")
scala> val resultDf = df.join(df, "key").join(df, "key")
scala> resultDf.show
...
  at org.apache.spark.sql.execution.exchange.ShuffleExchangeExec$$anonfun$doExecute$1.apply(ShuffleExchangeExec.scala:119)
  at org.apache.spark.sql.catalyst.errors.package$.attachTree(package.scala:52)
  ... 101 more
Caused by: java.lang.AssertionError: assertion failed
  at scala.Predef$.assert(Predef.scala:156)
  at org.apache.spark.sql.execution.exchange.ExchangeCoordinator.doEstimationIfNecessary(ExchangeCoordinator.scala:201)
  at org.apache.spark.sql.execution.exchange.ExchangeCoordinator.postShuffleRDD(ExchangeCoordinator.scala:259)
  at org.apache.spark.sql.execution.exchange.ShuffleExchangeExec$$anonfun$doExecute$1.apply(ShuffleExchangeExec.scala:124)
  at org.apache.spark.sql.execution.exchange.ShuffleExchangeExec$$anonfun$doExecute$1.apply(ShuffleExchangeExec.scala:119)
  at org.apache.spark.sql.catalyst.errors.package$.attachTree(package.scala:52)
...
```

## How was this patch tested?
Added tests in `ExchangeCoordinatorSuite`.

Author: Takeshi Yamamuro <yamamuro@apache.org>

Closes #21754 from maropu/SPARK-24705-2.
2018-08-02 13:05:36 -07:00
Takuya UESHIN 02f967795b [SPARK-23908][SQL] Add transform function.
## What changes were proposed in this pull request?

This pr adds `transform` function which transforms elements in an array using the function.
Optionally we can take the index of each element as the second argument.

```sql
> SELECT transform(array(1, 2, 3), x -> x + 1);
 array(2, 3, 4)
> SELECT transform(array(1, 2, 3), (x, i) -> x + i);
 array(1, 3, 5)
```

## How was this patch tested?

Added tests.

Author: Takuya UESHIN <ueshin@databricks.com>

Closes #21954 from ueshin/issues/SPARK-23908/transform.
2018-08-02 13:00:33 -07:00
Xiao Li 46110a589f [SPARK-24865][FOLLOW-UP] Remove AnalysisBarrier LogicalPlan Node
## What changes were proposed in this pull request?
Remove the AnalysisBarrier LogicalPlan node, which is useless now.

## How was this patch tested?
N/A

Author: Xiao Li <gatorsmile@gmail.com>

Closes #21962 from gatorsmile/refactor2.
2018-08-02 22:20:41 +08:00
Stavros Kontopoulos a65736996b [SPARK-14540][CORE] Fix remaining major issues for Scala 2.12 Support
## What changes were proposed in this pull request?
This PR addresses issues 2,3 in this [document](https://docs.google.com/document/d/1fbkjEL878witxVQpOCbjlvOvadHtVjYXeB-2mgzDTvk).

* We modified the closure cleaner to identify closures that are implemented via the LambdaMetaFactory mechanism (serializedLambdas) (issue2).

* We also fix the issue due to scala/bug#11016. There are two options for solving the Unit issue, either add () at the end of the closure or use the trick described in the doc. Otherwise overloading resolution does not work (we are not going to eliminate either of the methods) here. Compiler tries to adapt to Unit and makes these two methods candidates for overloading, when there is polymorphic overloading there is no ambiguity (that is the workaround implemented). This does not look that good but it serves its purpose as we need to support two different uses for method: `addTaskCompletionListener`. One that passes a TaskCompletionListener and one that passes a closure that is wrapped with a TaskCompletionListener later on (issue3).

Note: regarding issue 1 in the doc the plan is:

> Do Nothing. Don’t try to fix this as this is only a problem for Java users who would want to use 2.11 binaries. In that case they can cast to MapFunction to be able to utilize lambdas. In Spark 3.0.0 the API should be simplified so that this issue is removed.

## How was this patch tested?
This was manually tested:
```./dev/change-scala-version.sh 2.12
./build/mvn -DskipTests -Pscala-2.12 clean package
./build/mvn -Pscala-2.12 clean package -DwildcardSuites=org.apache.spark.serializer.ProactiveClosureSerializationSuite -Dtest=None
./build/mvn -Pscala-2.12 clean package -DwildcardSuites=org.apache.spark.util.ClosureCleanerSuite -Dtest=None
./build/mvn -Pscala-2.12 clean package -DwildcardSuites=org.apache.spark.streaming.DStreamClosureSuite -Dtest=None```

Author: Stavros Kontopoulos <stavros.kontopoulos@lightbend.com>

Closes #21930 from skonto/scala2.12-sup.
2018-08-02 09:17:09 -05:00
Wenchen Fan ce084d3e06 [SPARK-24990][SQL] merge ReadSupport and ReadSupportWithSchema
## What changes were proposed in this pull request?

Regarding user-specified schema, data sources may have 3 different behaviors:
1. must have a user-specified schema
2. can't have a user-specified schema
3. can accept the user-specified if it's given, or infer the schema.

I added `ReadSupportWithSchema` to support these behaviors, following data source v1. But it turns out we don't need this extra interface. We can just add a `createReader(schema, options)` to `ReadSupport` and make it call `createReader(options)` by default.

TODO: also fix the streaming API in followup PRs.

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #21946 from cloud-fan/ds-schema.
2018-08-01 15:57:54 -07:00
Yuming Wang 9f558601e8 [SPARK-24937][SQL] Datasource partition table should load empty static partitions
## What changes were proposed in this pull request?

How to reproduce:
```sql
spark-sql> CREATE TABLE tbl AS SELECT 1;
spark-sql> CREATE TABLE tbl1 (c1 BIGINT, day STRING, hour STRING)
         > USING parquet
         > PARTITIONED BY (day, hour);
spark-sql> INSERT INTO TABLE tbl1 PARTITION (day = '2018-07-25', hour='01') SELECT * FROM tbl where 1=0;
spark-sql> SHOW PARTITIONS tbl1;
spark-sql> CREATE TABLE tbl2 (c1 BIGINT)
         > PARTITIONED BY (day STRING, hour STRING);
spark-sql> INSERT INTO TABLE tbl2 PARTITION (day = '2018-07-25', hour='01') SELECT * FROM tbl where 1=0;
spark-sql> SHOW PARTITIONS tbl2;
day=2018-07-25/hour=01
spark-sql>
```
1. Users will be confused about whether the partition data of `tbl1` is generated.
2. Inconsistent with Hive table behavior.

This pr fix this issues.

## How was this patch tested?

unit tests

Author: Yuming Wang <yumwang@ebay.com>

Closes #21883 from wangyum/SPARK-24937.
2018-08-01 13:58:29 -07:00
Kazuaki Ishizaki 95a9d5e3a5 [SPARK-23915][SQL] Add array_except function
## What changes were proposed in this pull request?

The PR adds the SQL function `array_except`. The behavior of the function is based on Presto's one.

This function returns returns an array of the elements in array1 but not in array2.

Note: The order of elements in the result is not defined.

## How was this patch tested?

Added UTs.

Author: Kazuaki Ishizaki <ishizaki@jp.ibm.com>

Closes #21103 from kiszk/SPARK-23915.
2018-08-02 02:52:30 +08:00
Wenchen Fan defc54c69a [SPARK-24971][SQL] remove SupportsDeprecatedScanRow
## What changes were proposed in this pull request?

This is a follow up of https://github.com/apache/spark/pull/21118 .

In https://github.com/apache/spark/pull/21118 we added `SupportsDeprecatedScanRow`. Ideally data source should produce `InternalRow` instead of `Row` for better performance. We should remove `SupportsDeprecatedScanRow` and encourage data sources to produce `InternalRow`, which is also very easy to build.

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #21921 from cloud-fan/row.
2018-08-01 21:39:35 +08:00
Reynold Xin 1efffb7993 [SPARK-24982][SQL] UDAF resolution should not throw AssertionError
## What changes were proposed in this pull request?
When user calls anUDAF with the wrong number of arguments, Spark previously throws an AssertionError, which is not supposed to be a user-facing exception.  This patch updates it to throw AnalysisException instead, so it is consistent with a regular UDF.

## How was this patch tested?
Updated test case udaf.sql.

Author: Reynold Xin <rxin@databricks.com>

Closes #21938 from rxin/SPARK-24982.
2018-08-01 00:15:31 -07:00
Reynold Xin 1f7e22c72c [SPARK-24951][SQL] Table valued functions should throw AnalysisException
## What changes were proposed in this pull request?
Previously TVF resolution could throw IllegalArgumentException if the data type is null type. This patch replaces that exception with AnalysisException, enriched with positional information, to improve error message reporting and to be more consistent with rest of Spark SQL.

## How was this patch tested?
Updated the test case in table-valued-functions.sql.out, which is how I identified this problem in the first place.

Author: Reynold Xin <rxin@databricks.com>

Closes #21934 from rxin/SPARK-24951.
2018-07-31 22:25:40 -07:00
Mauro Palsgraaf 4ac2126bc6 [SPARK-24536] Validate that an evaluated limit clause cannot be null
## What changes were proposed in this pull request?

It proposes a version in which nullable expressions are not valid in the limit clause

## How was this patch tested?

It was tested with unit and e2e tests.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Mauro Palsgraaf <mauropalsgraaf@hotmail.com>

Closes #21807 from mauropalsgraaf/SPARK-24536.
2018-07-31 08:18:08 -07:00
maryannxue b4fd75fb9b [SPARK-24972][SQL] PivotFirst could not handle pivot columns of complex types
## What changes were proposed in this pull request?

When the pivot column is of a complex type, the eval() result will be an UnsafeRow, while the keys of the HashMap for column value matching is a GenericInternalRow. As a result, there will be no match and the result will always be empty.
So for a pivot column of complex-types, we should:
1) If the complex-type is not comparable (orderable), throw an Exception. It cannot be a pivot column.
2) Otherwise, if it goes through the `PivotFirst` code path, `PivotFirst` should use a TreeMap instead of HashMap for such columns.

This PR has also reverted the walk-around in Analyzer that had been introduced to avoid this `PivotFirst` issue.

## How was this patch tested?

Added UT.

Author: maryannxue <maryannxue@apache.org>

Closes #21926 from maryannxue/pivot_followup.
2018-07-30 23:43:53 -07:00
Reynold Xin abbb4ab4d8 [SPARK-24865][SQL] Remove AnalysisBarrier addendum
## What changes were proposed in this pull request?
I didn't want to pollute the diff in the previous PR and left some TODOs. This is a follow-up to address those TODOs.

## How was this patch tested?
Should be covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #21896 from rxin/SPARK-24865-addendum.
2018-07-30 14:05:45 -07:00
Takeshi Yamamuro 47d84e4d0e [SPARK-22814][SQL] Support Date/Timestamp in a JDBC partition column
## What changes were proposed in this pull request?
This pr supported Date/Timestamp in a JDBC partition column (a numeric column is only supported in the master). This pr also modified code to verify a partition column type;
```
val jdbcTable = spark.read
 .option("partitionColumn", "text")
 .option("lowerBound", "aaa")
 .option("upperBound", "zzz")
 .option("numPartitions", 2)
 .jdbc("jdbc:postgresql:postgres", "t", options)

// with this pr
org.apache.spark.sql.AnalysisException: Partition column type should be numeric, date, or timestamp, but string found.;
  at org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation$.verifyAndGetNormalizedPartitionColumn(JDBCRelation.scala:165)
  at org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation$.columnPartition(JDBCRelation.scala:85)
  at org.apache.spark.sql.execution.datasources.jdbc.JdbcRelationProvider.createRelation(JdbcRelationProvider.scala:36)
  at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:317)

// without this pr
java.lang.NumberFormatException: For input string: "aaa"
  at java.lang.NumberFormatException.forInputString(NumberFormatException.java:65)
  at java.lang.Long.parseLong(Long.java:589)
  at java.lang.Long.parseLong(Long.java:631)
  at scala.collection.immutable.StringLike$class.toLong(StringLike.scala:277)
```

Closes #19999

## How was this patch tested?
Added tests in `JDBCSuite`.

Author: Takeshi Yamamuro <yamamuro@apache.org>

Closes #21834 from maropu/SPARK-22814.
2018-07-30 07:42:00 -07:00
Gengliang Wang b90bfe3c42 [SPARK-24771][BUILD] Upgrade Apache AVRO to 1.8.2
## What changes were proposed in this pull request?

Upgrade Apache Avro from 1.7.7 to 1.8.2. The major new features:

1. More logical types. From the spec of 1.8.2 https://avro.apache.org/docs/1.8.2/spec.html#Logical+Types we can see comparing to [1.7.7](https://avro.apache.org/docs/1.7.7/spec.html#Logical+Types), the new version support:
    - Date
    - Time (millisecond precision)
    - Time (microsecond precision)
    - Timestamp (millisecond precision)
    - Timestamp (microsecond precision)
    - Duration

2. Single-object encoding: https://avro.apache.org/docs/1.8.2/spec.html#single_object_encoding

This PR aims to update Apache Spark to support these new features.

## How was this patch tested?

Unit test

Author: Gengliang Wang <gengliang.wang@databricks.com>

Closes #21761 from gengliangwang/upgrade_avro_1.8.
2018-07-30 07:30:47 -07:00
hyukjinkwon bfe60fcdb4 [SPARK-24934][SQL] Explicitly whitelist supported types in upper/lower bounds for in-memory partition pruning
## What changes were proposed in this pull request?

Looks we intentionally set `null` for upper/lower bounds for complex types and don't use it. However, these look used in in-memory partition pruning, which ends up with incorrect results.

This PR proposes to explicitly whitelist the supported types.

```scala
val df = Seq(Array("a", "b"), Array("c", "d")).toDF("arrayCol")
df.cache().filter("arrayCol > array('a', 'b')").show()
```

```scala
val df = sql("select cast('a' as binary) as a")
df.cache().filter("a == cast('a' as binary)").show()
```

**Before:**

```
+--------+
|arrayCol|
+--------+
+--------+
```

```
+---+
|  a|
+---+
+---+
```

**After:**

```
+--------+
|arrayCol|
+--------+
|  [c, d]|
+--------+
```

```
+----+
|   a|
+----+
|[61]|
+----+
```

## How was this patch tested?

Unit tests were added and manually tested.

Author: hyukjinkwon <gurwls223@apache.org>

Closes #21882 from HyukjinKwon/stats-filter.
2018-07-30 13:20:03 +08:00
Dilip Biswal 65a4bc143a [SPARK-21274][SQL] Implement INTERSECT ALL clause
## What changes were proposed in this pull request?
Implements INTERSECT ALL clause through query rewrites using existing operators in Spark.  Please refer to [Link](https://drive.google.com/open?id=1nyW0T0b_ajUduQoPgZLAsyHK8s3_dko3ulQuxaLpUXE) for the design.

Input Query
``` SQL
SELECT c1 FROM ut1 INTERSECT ALL SELECT c1 FROM ut2
```
Rewritten Query
```SQL
   SELECT c1
    FROM (
         SELECT replicate_row(min_count, c1)
         FROM (
              SELECT c1,
                     IF (vcol1_cnt > vcol2_cnt, vcol2_cnt, vcol1_cnt) AS min_count
              FROM (
                   SELECT   c1, count(vcol1) as vcol1_cnt, count(vcol2) as vcol2_cnt
                   FROM (
                        SELECT c1, true as vcol1, null as vcol2 FROM ut1
                        UNION ALL
                        SELECT c1, null as vcol1, true as vcol2 FROM ut2
                        ) AS union_all
                   GROUP BY c1
                   HAVING vcol1_cnt >= 1 AND vcol2_cnt >= 1
                  )
              )
          )
```

## How was this patch tested?
Added test cases in SQLQueryTestSuite, DataFrameSuite, SetOperationSuite

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #21886 from dilipbiswal/dkb_intersect_all_final.
2018-07-29 22:11:01 -07:00
hyukjinkwon 6690924c49 [MINOR] Avoid the 'latest' link that might vary per release in functions.scala's comment
## What changes were proposed in this pull request?

This PR propose to address https://github.com/apache/spark/pull/21318#discussion_r187843125 comment.

This is rather a nit but looks we better avoid to update the link for each release since it always points the latest (it doesn't look like worth enough updating release guide on the other hand as well).

## How was this patch tested?

N/A

Author: hyukjinkwon <gurwls223@apache.org>

Closes #21907 from HyukjinKwon/minor-fix.
2018-07-30 10:02:29 +08:00
liulijia 2c54aae1bc [SPARK-24809][SQL] Serializing LongToUnsafeRowMap in executor may result in data error
When join key is long or int in broadcast join, Spark will use `LongToUnsafeRowMap` to store key-values of the table witch will be broadcasted. But, when `LongToUnsafeRowMap` is broadcasted to executors, and it is too big to hold in memory, it will be stored in disk. At that time, because `write` uses a variable `cursor` to determine how many bytes in `page` of `LongToUnsafeRowMap` will be write out and the `cursor` was not restore when deserializing, executor will write out nothing from page into disk.

## What changes were proposed in this pull request?
Restore cursor value when deserializing.

Author: liulijia <liutang123@yeah.net>

Closes #21772 from liutang123/SPARK-24809.
2018-07-29 13:13:00 -07:00
Li Jin e8752095a0 [SPARK-24624][SQL][PYTHON] Support mixture of Python UDF and Scalar Pandas UDF
## What changes were proposed in this pull request?

This PR add supports for using mixed Python UDF and Scalar Pandas UDF, in the following two cases:

(1)
```
from pyspark.sql.functions import udf, pandas_udf

udf('int')
def f1(x):
    return x + 1

pandas_udf('int')
def f2(x):
    return x + 1

df = spark.range(0, 1).toDF('v') \
    .withColumn('foo', f1(col('v'))) \
    .withColumn('bar', f2(col('v')))

```

QueryPlan:
```
>>> df.explain(True)
== Parsed Logical Plan ==
'Project [v#2L, foo#5, f2('v) AS bar#9]
+- AnalysisBarrier
      +- Project [v#2L, f1(v#2L) AS foo#5]
         +- Project [id#0L AS v#2L]
            +- Range (0, 1, step=1, splits=Some(4))

== Analyzed Logical Plan ==
v: bigint, foo: int, bar: int
Project [v#2L, foo#5, f2(v#2L) AS bar#9]
+- Project [v#2L, f1(v#2L) AS foo#5]
   +- Project [id#0L AS v#2L]
      +- Range (0, 1, step=1, splits=Some(4))

== Optimized Logical Plan ==
Project [id#0L AS v#2L, f1(id#0L) AS foo#5, f2(id#0L) AS bar#9]
+- Range (0, 1, step=1, splits=Some(4))

== Physical Plan ==
*(2) Project [id#0L AS v#2L, pythonUDF0#13 AS foo#5, pythonUDF0#14 AS bar#9]
+- ArrowEvalPython [f2(id#0L)], [id#0L, pythonUDF0#13, pythonUDF0#14]
   +- BatchEvalPython [f1(id#0L)], [id#0L, pythonUDF0#13]
      +- *(1) Range (0, 1, step=1, splits=4)
```

(2)
```
from pyspark.sql.functions import udf, pandas_udf
udf('int')
def f1(x):
    return x + 1

pandas_udf('int')
def f2(x):
    return x + 1

df = spark.range(0, 1).toDF('v')
df = df.withColumn('foo', f2(f1(df['v'])))
```

QueryPlan:
```
>>> df.explain(True)
== Parsed Logical Plan ==
Project [v#21L, f2(f1(v#21L)) AS foo#46]
+- AnalysisBarrier
      +- Project [v#21L, f1(f2(v#21L)) AS foo#39]
         +- Project [v#21L, <lambda>(<lambda>(v#21L)) AS foo#32]
            +- Project [v#21L, <lambda>(<lambda>(v#21L)) AS foo#25]
               +- Project [id#19L AS v#21L]
                  +- Range (0, 1, step=1, splits=Some(4))

== Analyzed Logical Plan ==
v: bigint, foo: int
Project [v#21L, f2(f1(v#21L)) AS foo#46]
+- Project [v#21L, f1(f2(v#21L)) AS foo#39]
   +- Project [v#21L, <lambda>(<lambda>(v#21L)) AS foo#32]
      +- Project [v#21L, <lambda>(<lambda>(v#21L)) AS foo#25]
         +- Project [id#19L AS v#21L]
            +- Range (0, 1, step=1, splits=Some(4))

== Optimized Logical Plan ==
Project [id#19L AS v#21L, f2(f1(id#19L)) AS foo#46]
+- Range (0, 1, step=1, splits=Some(4))

== Physical Plan ==
*(2) Project [id#19L AS v#21L, pythonUDF0#50 AS foo#46]
+- ArrowEvalPython [f2(pythonUDF0#49)], [id#19L, pythonUDF0#49, pythonUDF0#50]
   +- BatchEvalPython [f1(id#19L)], [id#19L, pythonUDF0#49]
      +- *(1) Range (0, 1, step=1, splits=4)
```

## How was this patch tested?

New tests are added to BatchEvalPythonExecSuite and ScalarPandasUDFTests

Author: Li Jin <ice.xelloss@gmail.com>

Closes #21650 from icexelloss/SPARK-24624-mix-udf.
2018-07-28 13:41:07 +08:00
Reynold Xin 6424b146c9 [MINOR] Update docs for functions.scala to make it clear not all the built-in functions are defined there
The title summarizes the change.

Author: Reynold Xin <rxin@databricks.com>

Closes #21318 from rxin/functions.
2018-07-27 17:24:55 -07:00
Dilip Biswal 10f1f19659 [SPARK-21274][SQL] Implement EXCEPT ALL clause.
## What changes were proposed in this pull request?
Implements EXCEPT ALL clause through query rewrites using existing operators in Spark. In this PR, an internal UDTF (replicate_rows) is added to aid in preserving duplicate rows. Please refer to [Link](https://drive.google.com/open?id=1nyW0T0b_ajUduQoPgZLAsyHK8s3_dko3ulQuxaLpUXE) for the design.

**Note** This proposed UDTF is kept as a internal function that is purely used to aid with this particular rewrite to give us flexibility to change to a more generalized UDTF in future.

Input Query
``` SQL
SELECT c1 FROM ut1 EXCEPT ALL SELECT c1 FROM ut2
```
Rewritten Query
```SQL
SELECT c1
    FROM (
     SELECT replicate_rows(sum_val, c1)
       FROM (
         SELECT c1, sum_val
           FROM (
             SELECT c1, sum(vcol) AS sum_val
               FROM (
                 SELECT 1L as vcol, c1 FROM ut1
                 UNION ALL
                 SELECT -1L as vcol, c1 FROM ut2
              ) AS union_all
            GROUP BY union_all.c1
          )
        WHERE sum_val > 0
       )
   )
```

## How was this patch tested?
Added test cases in SQLQueryTestSuite, DataFrameSuite and SetOperationSuite

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #21857 from dilipbiswal/dkb_except_all_final.
2018-07-27 13:47:33 -07:00
pkuwm ef6c8395c4 [SPARK-23928][SQL] Add shuffle collection function.
## What changes were proposed in this pull request?

This PR adds a new collection function: shuffle. It generates a random permutation of the given array. This implementation uses the "inside-out" version of Fisher-Yates algorithm.

## How was this patch tested?

New tests are added to CollectionExpressionsSuite.scala and DataFrameFunctionsSuite.scala.

Author: Takuya UESHIN <ueshin@databricks.com>
Author: pkuwm <ihuizhi.lu@gmail.com>

Closes #21802 from ueshin/issues/SPARK-23928/shuffle.
2018-07-27 23:02:48 +09:00
maryannxue 21fcac1645 [SPARK-24288][SQL] Add a JDBC Option to enable preventing predicate pushdown
## What changes were proposed in this pull request?

Add a JDBC Option "pushDownPredicate" (default `true`) to allow/disallow predicate push-down in JDBC data source.

## How was this patch tested?

Add a test in `JDBCSuite`

Author: maryannxue <maryannxue@apache.org>

Closes #21875 from maryannxue/spark-24288.
2018-07-26 23:47:32 -07:00
Reynold Xin e6e9031d7b [SPARK-24865] Remove AnalysisBarrier
## What changes were proposed in this pull request?
AnalysisBarrier was introduced in SPARK-20392 to improve analysis speed (don't re-analyze nodes that have already been analyzed).

Before AnalysisBarrier, we already had some infrastructure in place, with analysis specific functions (resolveOperators and resolveExpressions). These functions do not recursively traverse down subplans that are already analyzed (with a mutable boolean flag _analyzed). The issue with the old system was that developers started using transformDown, which does a top-down traversal of the plan tree, because there was not top-down resolution function, and as a result analyzer performance became pretty bad.

In order to fix the issue in SPARK-20392, AnalysisBarrier was introduced as a special node and for this special node, transform/transformUp/transformDown don't traverse down. However, the introduction of this special node caused a lot more troubles than it solves. This implicit node breaks assumptions and code in a few places, and it's hard to know when analysis barrier would exist, and when it wouldn't. Just a simple search of AnalysisBarrier in PR discussions demonstrates it is a source of bugs and additional complexity.

Instead, this pull request removes AnalysisBarrier and reverts back to the old approach. We added infrastructure in tests that fail explicitly if transform methods are used in the analyzer.

## How was this patch tested?
Added a test suite AnalysisHelperSuite for testing the resolve* methods and transform* methods.

Author: Reynold Xin <rxin@databricks.com>
Author: Xiao Li <gatorsmile@gmail.com>

Closes #21822 from rxin/SPARK-24865.
2018-07-27 14:29:05 +08:00
Gengliang Wang fa09d91925 [SPARK-24919][BUILD] New linter rule for sparkContext.hadoopConfiguration
## What changes were proposed in this pull request?

In most cases, we should use `spark.sessionState.newHadoopConf()` instead of `sparkContext.hadoopConfiguration`, so that the hadoop configurations specified in Spark session
configuration will come into effect.

Add a rule matching `spark.sparkContext.hadoopConfiguration` or `spark.sqlContext.sparkContext.hadoopConfiguration` to prevent the usage.
## How was this patch tested?

Unit test

Author: Gengliang Wang <gengliang.wang@databricks.com>

Closes #21873 from gengliangwang/linterRule.
2018-07-26 16:50:59 -07:00
maryannxue 5ed7660d14 [SPARK-24802][SQL][FOLLOW-UP] Add a new config for Optimization Rule Exclusion
## What changes were proposed in this pull request?

This is an extension to the original PR, in which rule exclusion did not work for classes derived from Optimizer, e.g., SparkOptimizer.
To solve this issue, Optimizer and its derived classes will define/override `defaultBatches` and `nonExcludableRules` in order to define its default rule set as well as rules that cannot be excluded by the SQL config. In the meantime, Optimizer's `batches` method is dedicated to the rule exclusion logic and is defined "final".

## How was this patch tested?

Added UT.

Author: maryannxue <maryannxue@apache.org>

Closes #21876 from maryannxue/rule-exclusion.
2018-07-26 11:06:23 -07:00
Dongjoon Hyun 58353d7f4b [SPARK-24924][SQL] Add mapping for built-in Avro data source
## What changes were proposed in this pull request?

This PR aims to the followings.
1. Like `com.databricks.spark.csv` mapping, we had better map `com.databricks.spark.avro` to built-in Avro data source.
2. Remove incorrect error message, `Please find an Avro package at ...`.

## How was this patch tested?

Pass the newly added tests.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #21878 from dongjoon-hyun/SPARK-24924.
2018-07-26 16:11:03 +08:00
Takuya UESHIN c9b233d414 [SPARK-24878][SQL] Fix reverse function for array type of primitive type containing null.
## What changes were proposed in this pull request?

If we use `reverse` function for array type of primitive type containing `null` and the child array is `UnsafeArrayData`, the function returns a wrong result because `UnsafeArrayData` doesn't define the behavior of re-assignment, especially we can't set a valid value after we set `null`.

## How was this patch tested?

Added some tests.

Author: Takuya UESHIN <ueshin@databricks.com>

Closes #21830 from ueshin/issues/SPARK-24878/fix_reverse.
2018-07-26 15:06:13 +08:00
Xiao Li d2e7deb59f [SPARK-24867][SQL] Add AnalysisBarrier to DataFrameWriter
## What changes were proposed in this pull request?
```Scala
      val udf1 = udf({(x: Int, y: Int) => x + y})
      val df = spark.range(0, 3).toDF("a")
        .withColumn("b", udf1($"a", udf1($"a", lit(10))))
      df.cache()
      df.write.saveAsTable("t")
```
Cache is not being used because the plans do not match with the cached plan. This is a regression caused by the changes we made in AnalysisBarrier, since not all the Analyzer rules are idempotent.

## How was this patch tested?
Added a test.

Also found a bug in the DSV1 write path. This is not a regression. Thus, opened a separate JIRA https://issues.apache.org/jira/browse/SPARK-24869

Author: Xiao Li <gatorsmile@gmail.com>

Closes #21821 from gatorsmile/testMaster22.
2018-07-25 17:22:37 -07:00
Koert Kuipers 17f469bc80 [SPARK-24860][SQL] Support setting of partitionOverWriteMode in output options for writing DataFrame
## What changes were proposed in this pull request?

Besides spark setting spark.sql.sources.partitionOverwriteMode also allow setting partitionOverWriteMode per write

## How was this patch tested?

Added unit test in InsertSuite

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Koert Kuipers <koert@tresata.com>

Closes #21818 from koertkuipers/feat-partition-overwrite-mode-per-write.
2018-07-25 13:06:03 -07:00
Maxim Gekk 2f77616e1d [SPARK-24849][SPARK-24911][SQL] Converting a value of StructType to a DDL string
## What changes were proposed in this pull request?

In the PR, I propose to extend the `StructType`/`StructField` classes by new method `toDDL` which converts a value of the `StructType`/`StructField` type to a string formatted in DDL style. The resulted string can be used in a table creation.

The `toDDL` method of `StructField` is reused in `SHOW CREATE TABLE`. In this way the PR fixes the bug of unquoted names of nested fields.

## How was this patch tested?

I add a test for checking the new method and 2 round trip tests: `fromDDL` -> `toDDL` and `toDDL` -> `fromDDL`

Author: Maxim Gekk <maxim.gekk@databricks.com>

Closes #21803 from MaxGekk/to-ddl.
2018-07-25 11:09:12 -07:00
Yuming Wang 7a5fd4a91e [SPARK-18874][SQL][FOLLOW-UP] Improvement type mismatched message
## What changes were proposed in this pull request?
Improvement `IN` predicate type mismatched message:
```sql
Mismatched columns:
[(, t, 4, ., `, t, 4, a, `, :, d, o, u, b, l, e, ,,  , t, 5, ., `, t, 5, a, `, :, d, e, c, i, m, a, l, (, 1, 8, ,, 0, ), ), (, t, 4, ., `, t, 4, c, `, :, s, t, r, i, n, g, ,,  , t, 5, ., `, t, 5, c, `, :, b, i, g, i, n, t, )]
```
After this patch:
```sql
Mismatched columns:
[(t4.`t4a`:double, t5.`t5a`:decimal(18,0)), (t4.`t4c`:string, t5.`t5c`:bigint)]
```

## How was this patch tested?

unit tests

Author: Yuming Wang <yumwang@ebay.com>

Closes #21863 from wangyum/SPARK-18874.
2018-07-24 23:59:13 -07:00
crafty-coder 78e0a725e0 [SPARK-19018][SQL] Add support for custom encoding on csv writer
## What changes were proposed in this pull request?

Add support for custom encoding on csv writer, see https://issues.apache.org/jira/browse/SPARK-19018

## How was this patch tested?

Added two unit tests in CSVSuite

Author: crafty-coder <carlospb86@gmail.com>
Author: Carlos <crafty-coder@users.noreply.github.com>

Closes #20949 from crafty-coder/master.
2018-07-25 14:17:20 +08:00
Dilip Biswal afb0627536 [SPARK-23957][SQL] Sorts in subqueries are redundant and can be removed
## What changes were proposed in this pull request?
Thanks to henryr for the original idea at https://github.com/apache/spark/pull/21049

Description from the original PR :
Subqueries (at least in SQL) have 'bag of tuples' semantics. Ordering
them is therefore redundant (unless combined with a limit).

This patch removes the top sort operators from the subquery plans.

This closes https://github.com/apache/spark/pull/21049.

## How was this patch tested?
Added test cases in SubquerySuite to cover in, exists and scalar subqueries.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #21853 from dilipbiswal/SPARK-23957.
2018-07-24 20:46:27 -07:00
DB Tsai d4c3415894 [SPARK-24890][SQL] Short circuiting the if condition when trueValue and falseValue are the same
## What changes were proposed in this pull request?

When `trueValue` and `falseValue` are semantic equivalence, the condition expression in `if` can be removed to avoid extra computation in runtime.

## How was this patch tested?

Test added.

Author: DB Tsai <d_tsai@apple.com>

Closes #21848 from dbtsai/short-circuit-if.
2018-07-24 20:21:11 -07:00
maryannxue c26b092169 [SPARK-24891][SQL] Fix HandleNullInputsForUDF rule
## What changes were proposed in this pull request?

The HandleNullInputsForUDF would always add a new `If` node every time it is applied. That would cause a difference between the same plan being analyzed once and being analyzed twice (or more), thus raising issues like plan not matched in the cache manager. The solution is to mark the arguments as null-checked, which is to add a "KnownNotNull" node above those arguments, when adding the UDF under an `If` node, because clearly the UDF will not be called when any of those arguments is null.

## How was this patch tested?

Add new tests under sql/UDFSuite and AnalysisSuite.

Author: maryannxue <maryannxue@apache.org>

Closes #21851 from maryannxue/spark-24891.
2018-07-24 19:35:34 -07:00
Ryan Blue 9d27541a85 [SPARK-23325] Use InternalRow when reading with DataSourceV2.
## What changes were proposed in this pull request?

This updates the DataSourceV2 API to use InternalRow instead of Row for the default case with no scan mix-ins.

Support for readers that produce Row is added through SupportsDeprecatedScanRow, which matches the previous API. Readers that used Row now implement this class and should be migrated to InternalRow.

Readers that previously implemented SupportsScanUnsafeRow have been migrated to use no SupportsScan mix-ins and produce InternalRow.

## How was this patch tested?

This uses existing tests.

Author: Ryan Blue <blue@apache.org>

Closes #21118 from rdblue/SPARK-23325-datasource-v2-internal-row.
2018-07-24 10:46:36 -07:00
10129659 13a67b070d [SPARK-24870][SQL] Cache can't work normally if there are case letters in SQL
## What changes were proposed in this pull request?
Modified the canonicalized to not case-insensitive.
Before the PR, cache can't work normally if there are case letters in SQL,
for example:
     sql("CREATE TABLE IF NOT EXISTS src (key INT, value STRING) USING hive")

    sql("select key, sum(case when Key > 0 then 1 else 0 end) as positiveNum " +
      "from src group by key").cache().createOrReplaceTempView("src_cache")
    sql(
      s"""select a.key
           from
           (select key from src_cache where positiveNum = 1)a
           left join
           (select key from src_cache )b
           on a.key=b.key
        """).explain

The physical plan of the sql is:
![image](https://user-images.githubusercontent.com/26834091/42979518-3decf0fa-8c05-11e8-9837-d5e4c334cb1f.png)

The subquery "select key from src_cache where positiveNum = 1" on the left of join can use the cache data, but the subquery "select key from src_cache" on the right of join cannot use the cache data.

## How was this patch tested?

new added test

Author: 10129659 <chen.yanshan@zte.com.cn>

Closes #21823 from eatoncys/canonicalized.
2018-07-23 23:05:08 -07:00
Tathagata Das 61f0ca4f1c [SPARK-24699][SS] Make watermarks work with Trigger.Once by saving updated watermark to commit log
## What changes were proposed in this pull request?

Streaming queries with watermarks do not work with Trigger.Once because of the following.
- Watermark is updated in the driver memory after a batch completes, but it is persisted to checkpoint (in the offset log) only when the next batch is planned
- In trigger.once, the query terminated as soon as one batch has completed. Hence, the updated watermark is never persisted anywhere.

The simple solution is to persist the updated watermark value in the commit log when a batch is marked as completed. Then the next batch, in the next trigger.once run can pick it up from the commit log.

## How was this patch tested?
new unit tests

Co-authored-by: Tathagata Das <tathagata.das1565gmail.com>
Co-authored-by: c-horn <chorn4033gmail.com>

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #21746 from tdas/SPARK-24699.
2018-07-23 13:03:32 -07:00
Onur Satici 2edf17effd [SPARK-24850][SQL] fix str representation of CachedRDDBuilder
## What changes were proposed in this pull request?
As of https://github.com/apache/spark/pull/21018, InMemoryRelation includes its cacheBuilder when logging query plans. This PR changes the string representation of the CachedRDDBuilder to not include the cached spark plan.

## How was this patch tested?

spark-shell, query:
```
var df_cached = spark.read.format("csv").option("header", "true").load("test.csv").cache()
0 to 1 foreach { _ =>
df_cached = df_cached.join(spark.read.format("csv").option("header", "true").load("test.csv"), "A").cache()
}
df_cached.explain
```
as of master results in:
```
== Physical Plan ==
InMemoryTableScan [A#10, B#11, B#35, B#87]
+- InMemoryRelation [A#10, B#11, B#35, B#87], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(2) Project [A#10, B#11, B#35, B#87]
+- *(2) BroadcastHashJoin [A#10], [A#86], Inner, BuildRight
:- *(2) Filter isnotnull(A#10)
: +- InMemoryTableScan [A#10, B#11, B#35], [isnotnull(A#10)]
: +- InMemoryRelation [A#10, B#11, B#35], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(2) Project [A#10, B#11, B#35]
+- *(2) BroadcastHashJoin [A#10], [A#34], Inner, BuildRight
:- *(2) Filter isnotnull(A#10)
: +- InMemoryTableScan [A#10, B#11], [isnotnull(A#10)]
: +- InMemoryRelation [A#10, B#11], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
: +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
+- BroadcastExchange HashedRelationBroadcastMode(List(input[0, string, false]))
+- *(1) Filter isnotnull(A#34)
+- InMemoryTableScan [A#34, B#35], [isnotnull(A#34)]
+- InMemoryRelation [A#34, B#35], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
+- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
: +- *(2) Project [A#10, B#11, B#35]
: +- *(2) BroadcastHashJoin [A#10], [A#34], Inner, BuildRight
: :- *(2) Filter isnotnull(A#10)
: : +- InMemoryTableScan [A#10, B#11], [isnotnull(A#10)]
: : +- InMemoryRelation [A#10, B#11], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
: : +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
: +- BroadcastExchange HashedRelationBroadcastMode(List(input[0, string, false]))
: +- *(1) Filter isnotnull(A#34)
: +- InMemoryTableScan [A#34, B#35], [isnotnull(A#34)]
: +- InMemoryRelation [A#34, B#35], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
: +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
+- BroadcastExchange HashedRelationBroadcastMode(List(input[0, string, false]))
+- *(1) Filter isnotnull(A#86)
+- InMemoryTableScan [A#86, B#87], [isnotnull(A#86)]
+- InMemoryRelation [A#86, B#87], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
+- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
+- *(2) Project [A#10, B#11, B#35, B#87]
+- *(2) BroadcastHashJoin [A#10], [A#86], Inner, BuildRight
:- *(2) Filter isnotnull(A#10)
: +- InMemoryTableScan [A#10, B#11, B#35], [isnotnull(A#10)]
: +- InMemoryRelation [A#10, B#11, B#35], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(2) Project [A#10, B#11, B#35]
+- *(2) BroadcastHashJoin [A#10], [A#34], Inner, BuildRight
:- *(2) Filter isnotnull(A#10)
: +- InMemoryTableScan [A#10, B#11], [isnotnull(A#10)]
: +- InMemoryRelation [A#10, B#11], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
: +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
+- BroadcastExchange HashedRelationBroadcastMode(List(input[0, string, false]))
+- *(1) Filter isnotnull(A#34)
+- InMemoryTableScan [A#34, B#35], [isnotnull(A#34)]
+- InMemoryRelation [A#34, B#35], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
+- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
: +- *(2) Project [A#10, B#11, B#35]
: +- *(2) BroadcastHashJoin [A#10], [A#34], Inner, BuildRight
: :- *(2) Filter isnotnull(A#10)
: : +- InMemoryTableScan [A#10, B#11], [isnotnull(A#10)]
: : +- InMemoryRelation [A#10, B#11], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
: : +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
: +- BroadcastExchange HashedRelationBroadcastMode(List(input[0, string, false]))
: +- *(1) Filter isnotnull(A#34)
: +- InMemoryTableScan [A#34, B#35], [isnotnull(A#34)]
: +- InMemoryRelation [A#34, B#35], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
: +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
+- BroadcastExchange HashedRelationBroadcastMode(List(input[0, string, false]))
+- *(1) Filter isnotnull(A#86)
+- InMemoryTableScan [A#86, B#87], [isnotnull(A#86)]
+- InMemoryRelation [A#86, B#87], CachedRDDBuilder(true,10000,StorageLevel(disk, memory, deserialized, 1 replicas),*(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
,None)
+- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
```
with this patch results in:
```
== Physical Plan ==
InMemoryTableScan [A#10, B#11, B#35, B#87]
   +- InMemoryRelation [A#10, B#11, B#35, B#87], CachedRDDBuilder(true, 10000, StorageLevel(disk, memory, deserialized, 1 replicas))
         +- *(2) Project [A#10, B#11, B#35, B#87]
            +- *(2) BroadcastHashJoin [A#10], [A#86], Inner, BuildRight
               :- *(2) Filter isnotnull(A#10)
               :  +- InMemoryTableScan [A#10, B#11, B#35], [isnotnull(A#10)]
               :        +- InMemoryRelation [A#10, B#11, B#35], CachedRDDBuilder(true, 10000, StorageLevel(disk, memory, deserialized, 1 replicas))
               :              +- *(2) Project [A#10, B#11, B#35]
               :                 +- *(2) BroadcastHashJoin [A#10], [A#34], Inner, BuildRight
               :                    :- *(2) Filter isnotnull(A#10)
               :                    :  +- InMemoryTableScan [A#10, B#11], [isnotnull(A#10)]
               :                    :        +- InMemoryRelation [A#10, B#11], CachedRDDBuilder(true, 10000, StorageLevel(disk, memory, deserialized, 1 replicas))
               :                    :              +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
               :                    +- BroadcastExchange HashedRelationBroadcastMode(List(input[0, string, false]))
               :                       +- *(1) Filter isnotnull(A#34)
               :                          +- InMemoryTableScan [A#34, B#35], [isnotnull(A#34)]
               :                                +- InMemoryRelation [A#34, B#35], CachedRDDBuilder(true, 10000, StorageLevel(disk, memory, deserialized, 1 replicas))
               :                                      +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
               +- BroadcastExchange HashedRelationBroadcastMode(List(input[0, string, false]))
                  +- *(1) Filter isnotnull(A#86)
                     +- InMemoryTableScan [A#86, B#87], [isnotnull(A#86)]
                           +- InMemoryRelation [A#86, B#87], CachedRDDBuilder(true, 10000, StorageLevel(disk, memory, deserialized, 1 replicas))
                                 +- *(1) FileScan csv [A#10,B#11] Batched: false, Format: CSV, Location: InMemoryFileIndex[file:test.csv], PartitionFilters: [], PushedFilters: [], ReadSchema: struct<A:string,B:string>
```

Author: Onur Satici <osatici@palantir.com>

Closes #21805 from onursatici/os/inmemoryrelation-str.
2018-07-23 09:52:28 -07:00
Daniel van der Ende 2333a34d39 [SPARK-22880][SQL] Add cascadeTruncate option to JDBC datasource
This commit adds the `cascadeTruncate` option to the JDBC datasource
API, for databases that support this functionality (PostgreSQL and
Oracle at the moment). This allows for applying a cascading truncate
that affects tables that have foreign key constraints on the table
being truncated.

## What changes were proposed in this pull request?

Add `cascadeTruncate` option to JDBC datasource API. Allow this to affect the
`TRUNCATE` query for databases that support this option.

## How was this patch tested?
Existing tests for `truncateQuery` were updated. Also, an additional test was added
to ensure that the correct syntax was applied, and that enabling the config for databases
that do not support this option does not result in invalid queries.

Author: Daniel van der Ende <daniel.vanderende@gmail.com>

Closes #20057 from danielvdende/SPARK-22880.
2018-07-20 13:03:57 -07:00
hyukjinkwon e0b6383218 [SPARK-23731][SQL] Make FileSourceScanExec canonicalizable after being (de)serialized
## What changes were proposed in this pull request?

### What's problem?

In some cases, sub scalar query could throw a NPE, which is caused in execution side.

```
java.lang.NullPointerException
	at org.apache.spark.sql.execution.FileSourceScanExec.<init>(DataSourceScanExec.scala:169)
	at org.apache.spark.sql.execution.FileSourceScanExec.doCanonicalize(DataSourceScanExec.scala:526)
	at org.apache.spark.sql.execution.FileSourceScanExec.doCanonicalize(DataSourceScanExec.scala:159)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.canonicalized$lzycompute(QueryPlan.scala:211)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.canonicalized(QueryPlan.scala:210)
	at org.apache.spark.sql.catalyst.plans.QueryPlan$$anonfun$3.apply(QueryPlan.scala:225)
	at org.apache.spark.sql.catalyst.plans.QueryPlan$$anonfun$3.apply(QueryPlan.scala:225)
	at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
	at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
	at scala.collection.immutable.List.foreach(List.scala:392)
	at scala.collection.TraversableLike$class.map(TraversableLike.scala:234)
	at scala.collection.immutable.List.map(List.scala:296)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.doCanonicalize(QueryPlan.scala:225)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.canonicalized$lzycompute(QueryPlan.scala:211)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.canonicalized(QueryPlan.scala:210)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.sameResult(QueryPlan.scala:258)
	at org.apache.spark.sql.execution.ScalarSubquery.semanticEquals(subquery.scala:58)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions$Expr.equals(EquivalentExpressions.scala:36)
	at scala.collection.mutable.HashTable$class.elemEquals(HashTable.scala:364)
	at scala.collection.mutable.HashMap.elemEquals(HashMap.scala:40)
	at scala.collection.mutable.HashTable$class.scala$collection$mutable$HashTable$$findEntry0(HashTable.scala:139)
	at scala.collection.mutable.HashTable$class.findEntry(HashTable.scala:135)
	at scala.collection.mutable.HashMap.findEntry(HashMap.scala:40)
	at scala.collection.mutable.HashMap.get(HashMap.scala:70)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions.addExpr(EquivalentExpressions.scala:56)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions.addExprTree(EquivalentExpressions.scala:97)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions$$anonfun$addExprTree$1.apply(EquivalentExpressions.scala:98)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions$$anonfun$addExprTree$1.apply(EquivalentExpressions.scala:98)
	at scala.collection.immutable.List.foreach(List.scala:392)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions.addExprTree(EquivalentExpressions.scala:98)
	at org.apache.spark.sql.catalyst.expressions.codegen.CodegenContext$$anonfun$subexpressionElimination$1.apply(CodeGenerator.scala:1102)
	at org.apache.spark.sql.catalyst.expressions.codegen.CodegenContext$$anonfun$subexpressionElimination$1.apply(CodeGenerator.scala:1102)
	at scala.collection.immutable.List.foreach(List.scala:392)
	at org.apache.spark.sql.catalyst.expressions.codegen.CodegenContext.subexpressionElimination(CodeGenerator.scala:1102)
	at org.apache.spark.sql.catalyst.expressions.codegen.CodegenContext.generateExpressions(CodeGenerator.scala:1154)
	at org.apache.spark.sql.catalyst.expressions.codegen.GenerateUnsafeProjection$.createCode(GenerateUnsafeProjection.scala:270)
	at org.apache.spark.sql.catalyst.expressions.codegen.GenerateUnsafeProjection$.create(GenerateUnsafeProjection.scala:319)
	at org.apache.spark.sql.catalyst.expressions.codegen.GenerateUnsafeProjection$.generate(GenerateUnsafeProjection.scala:308)
	at org.apache.spark.sql.catalyst.expressions.UnsafeProjection$.create(Projection.scala:181)
	at org.apache.spark.sql.execution.ProjectExec$$anonfun$9.apply(basicPhysicalOperators.scala:71)
	at org.apache.spark.sql.execution.ProjectExec$$anonfun$9.apply(basicPhysicalOperators.scala:70)
	at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsWithIndexInternal$1$$anonfun$apply$24.apply(RDD.scala:818)
	at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsWithIndexInternal$1$$anonfun$apply$24.apply(RDD.scala:818)
	at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
	at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
	at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
	at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
	at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
	at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
	at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
	at org.apache.spark.scheduler.Task.run(Task.scala:109)
	at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:367)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
	at java.lang.Thread.run(Thread.java:748)
```

### How does this happen?

Here looks what happen now:

1. Sub scalar query was made (for instance `SELECT (SELECT id FROM foo)`).

2. Try to extract some common expressions (via `CodeGenerator.subexpressionElimination`) so that it can generates some common codes and can be reused.

3. During this, seems it extracts some expressions that can be reused (via `EquivalentExpressions.addExprTree`)

  b2deef64f6/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/codegen/CodeGenerator.scala (L1102)

4. During this, if the hash (`EquivalentExpressions.Expr.hashCode`) happened to be the same at `EquivalentExpressions.addExpr` anyhow, `EquivalentExpressions.Expr.equals` is called to identify object in the same hash, which eventually calls `semanticEquals` in `ScalarSubquery`

  087879a77a/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/EquivalentExpressions.scala (L54)

  087879a77a/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/EquivalentExpressions.scala (L36)

5. `ScalarSubquery`'s `semanticEquals` needs `SubqueryExec`'s `sameResult`

  77a2fc5b52/sql/core/src/main/scala/org/apache/spark/sql/execution/subquery.scala (L58)

6. `SubqueryExec`'s `sameResult` requires a canonicalized plan which calls `FileSourceScanExec`'s `doCanonicalize`

  e008ad1752/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/plans/QueryPlan.scala (L258)

7. In `FileSourceScanExec`'s `doCanonicalize`, `FileSourceScanExec`'s `relation` is required but seems `transient` so it becomes `null`.

  e76b0124fb/sql/core/src/main/scala/org/apache/spark/sql/execution/DataSourceScanExec.scala (L527)

  e76b0124fb/sql/core/src/main/scala/org/apache/spark/sql/execution/DataSourceScanExec.scala (L160)

8. NPE is thrown.

\*1. driver side
\*2., 3., 4., 5., 6., 7., 8. executor side

Note that most of cases, it looks fine because we will usually call:

087879a77a/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/EquivalentExpressions.scala (L40)

which make a canonicalized plan via:

b045315e5d/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/Expression.scala (L192)

77a2fc5b52/sql/core/src/main/scala/org/apache/spark/sql/execution/subquery.scala (L52)

### How to reproduce?

This looks what happened now. I can reproduce this by a bit of messy way:

```diff
diff --git a/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/EquivalentExpressions.scala b/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/EquivalentExpressions.scala
index 8d06804ce1e..d25fc9a7ba9 100644
--- a/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/EquivalentExpressions.scala
+++ b/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/EquivalentExpressions.scala
 -37,7 +37,9  class EquivalentExpressions {
       case _ => false
     }

-    override def hashCode: Int = e.semanticHash()
+    override def hashCode: Int = {
+      1
+    }
   }
```

```scala
spark.range(1).write.mode("overwrite").parquet("/tmp/foo")
spark.read.parquet("/tmp/foo").createOrReplaceTempView("foo")
spark.conf.set("spark.sql.codegen.wholeStage", false)
sql("SELECT (SELECT id FROM foo) == (SELECT id FROM foo)").collect()
```

### How does this PR fix?

- Make all variables that access to `FileSourceScanExec`'s `relation` as `lazy val` so that we avoid NPE. This is a temporary fix.

- Allow `makeCopy` in `SparkPlan` without Spark session too. This looks still able to be accessed within executor side. For instance:

  ```
	at org.apache.spark.sql.execution.SparkPlan.makeCopy(SparkPlan.scala:70)
	at org.apache.spark.sql.execution.SparkPlan.makeCopy(SparkPlan.scala:47)
	at org.apache.spark.sql.catalyst.trees.TreeNode.withNewChildren(TreeNode.scala:233)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.doCanonicalize(QueryPlan.scala:243)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.canonicalized$lzycompute(QueryPlan.scala:211)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.canonicalized(QueryPlan.scala:210)
	at org.apache.spark.sql.catalyst.plans.QueryPlan.sameResult(QueryPlan.scala:258)
	at org.apache.spark.sql.execution.ScalarSubquery.semanticEquals(subquery.scala:58)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions$Expr.equals(EquivalentExpressions.scala:36)
	at scala.collection.mutable.HashTable$class.elemEquals(HashTable.scala:364)
	at scala.collection.mutable.HashMap.elemEquals(HashMap.scala:40)
	at scala.collection.mutable.HashTable$class.scala$collection$mutable$HashTable$$findEntry0(HashTable.scala:139)
	at scala.collection.mutable.HashTable$class.findEntry(HashTable.scala:135)
	at scala.collection.mutable.HashMap.findEntry(HashMap.scala:40)
	at scala.collection.mutable.HashMap.get(HashMap.scala:70)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions.addExpr(EquivalentExpressions.scala:54)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions.addExprTree(EquivalentExpressions.scala:95)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions$$anonfun$addExprTree$1.apply(EquivalentExpressions.scala:96)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions$$anonfun$addExprTree$1.apply(EquivalentExpressions.scala:96)
	at scala.collection.immutable.List.foreach(List.scala:392)
	at org.apache.spark.sql.catalyst.expressions.EquivalentExpressions.addExprTree(EquivalentExpressions.scala:96)
	at org.apache.spark.sql.catalyst.expressions.codegen.CodegenContext$$anonfun$subexpressionElimination$1.apply(CodeGenerator.scala:1102)
	at org.apache.spark.sql.catalyst.expressions.codegen.CodegenContext$$anonfun$subexpressionElimination$1.apply(CodeGenerator.scala:1102)
	at scala.collection.immutable.List.foreach(List.scala:392)
	at org.apache.spark.sql.catalyst.expressions.codegen.CodegenContext.subexpressionElimination(CodeGenerator.scala:1102)
	at org.apache.spark.sql.catalyst.expressions.codegen.CodegenContext.generateExpressions(CodeGenerator.scala:1154)
	at org.apache.spark.sql.catalyst.expressions.codegen.GenerateUnsafeProjection$.createCode(GenerateUnsafeProjection.scala:270)
	at org.apache.spark.sql.catalyst.expressions.codegen.GenerateUnsafeProjection$.create(GenerateUnsafeProjection.scala:319)
	at org.apache.spark.sql.catalyst.expressions.codegen.GenerateUnsafeProjection$.generate(GenerateUnsafeProjection.scala:308)
	at org.apache.spark.sql.catalyst.expressions.UnsafeProjection$.create(Projection.scala:181)
	at org.apache.spark.sql.execution.ProjectExec$$anonfun$9.apply(basicPhysicalOperators.scala:71)
	at org.apache.spark.sql.execution.ProjectExec$$anonfun$9.apply(basicPhysicalOperators.scala:70)
	at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsWithIndexInternal$1$$anonfun$apply$24.apply(RDD.scala:818)
	at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsWithIndexInternal$1$$anonfun$apply$24.apply(RDD.scala:818)
	at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
	at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
	at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
	at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
	at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
	at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
	at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
	at org.apache.spark.scheduler.Task.run(Task.scala:109)
	at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:367)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
	at java.lang.Thread.run(Thread.java:748)
  ```

This PR takes over https://github.com/apache/spark/pull/20856.

## How was this patch tested?

Manually tested and unit test was added.

Closes #20856

Author: hyukjinkwon <gurwls223@apache.org>

Closes #21815 from HyukjinKwon/SPARK-23731.
2018-07-20 20:59:48 +08:00
Dilip Biswal 2b91d9918c [SPARK-24424][SQL] Support ANSI-SQL compliant syntax for GROUPING SET
## What changes were proposed in this pull request?

Enhances the parser and analyzer to support ANSI compliant syntax for GROUPING SET. As part of this change we derive the grouping expressions from user supplied groupings in the grouping sets clause.

```SQL
SELECT c1, c2, max(c3)
FROM t1
GROUP BY GROUPING SETS ((c1), (c1, c2))
```

## How was this patch tested?
Added tests in SQLQueryTestSuite and ResolveGroupingAnalyticsSuite.

Please review http://spark.apache.org/contributing.html before opening a pull request.

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #21813 from dilipbiswal/spark-24424.
2018-07-19 23:52:53 -07:00
Marco Gaido a5925c1631 [SPARK-24268][SQL] Use datatype.catalogString in error messages
## What changes were proposed in this pull request?

As stated in https://github.com/apache/spark/pull/21321, in the error messages we should use `catalogString`. This is not the case, as SPARK-22893 used `simpleString` in order to have the same representation everywhere and it missed some places.

The PR unifies the messages using alway the `catalogString` representation of the dataTypes in the messages.

## How was this patch tested?

existing/modified UTs

Author: Marco Gaido <marcogaido91@gmail.com>

Closes #21804 from mgaido91/SPARK-24268_catalog.
2018-07-19 23:29:29 -07:00
Wenchen Fan 1462b17666 [SPARK-24861][SS][TEST] create corrected temp directories in RateSourceSuite
## What changes were proposed in this pull request?

`RateSourceSuite` may leave garbage files under `sql/core/dummy`, we should use a corrected temp directory

## How was this patch tested?

test only

Author: Wenchen Fan <wenchen@databricks.com>

Closes #21817 from cloud-fan/minor.
2018-07-20 13:40:26 +08:00
Tathagata Das b3d88ac029 [SPARK-22187][SS] Update unsaferow format for saved state in flatMapGroupsWithState to allow timeouts with deleted state
## What changes were proposed in this pull request?

Currently, the group state of user-defined-type is encoded as top-level columns in the UnsafeRows stores in the state store. The timeout timestamp is also saved as (when needed) as the last top-level column. Since the group state is serialized to top-level columns, you cannot save "null" as a value of state (setting null in all the top-level columns is not equivalent). So we don't let the user set the timeout without initializing the state for a key. Based on user experience, this leads to confusion.

This PR is to change the row format such that the state is saved as nested columns. This would allow the state to be set to null, and avoid these confusing corner cases. However, queries recovering from existing checkpoint will use the previous format to maintain compatibility with existing production queries.

## How was this patch tested?
Refactored existing end-to-end tests and added new tests for explicitly testing obj-to-row conversion for both state formats.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #21739 from tdas/SPARK-22187-1.
2018-07-19 13:17:28 -07:00
Gengliang Wang 6a9a058e09 [SPARK-24858][SQL] Avoid unnecessary parquet footer reads
## What changes were proposed in this pull request?

Currently the same Parquet footer is read twice in the function `buildReaderWithPartitionValues` of ParquetFileFormat if filter push down is enabled.

Fix it with simple changes.
## How was this patch tested?

Unit test

Author: Gengliang Wang <gengliang.wang@databricks.com>

Closes #21814 from gengliangwang/parquetFooter.
2018-07-19 22:24:53 +08:00
Jungtaek Lim 8b7d4f842f [SPARK-24717][SS] Split out max retain version of state for memory in HDFSBackedStateStoreProvider
## What changes were proposed in this pull request?

This patch proposes breaking down configuration of retaining batch size on state into two pieces: files and in memory (cache). While this patch reuses existing configuration for files, it introduces new configuration, "spark.sql.streaming.maxBatchesToRetainInMemory" to configure max count of batch to retain in memory.

## How was this patch tested?

Apply this patch on top of SPARK-24441 (https://github.com/apache/spark/pull/21469), and manually tested in various workloads to ensure overall size of states in memory is around 2x or less of the size of latest version of state, while it was 10x ~ 80x before applying the patch.

Author: Jungtaek Lim <kabhwan@gmail.com>

Closes #21700 from HeartSaVioR/SPARK-24717.
2018-07-19 00:07:35 -07:00