Commit graph

4995 commits

Author SHA1 Message Date
Aaron Davidson daa7792ad6 Refactor SamplingSizeTracker into SizeTrackingAppendOnlyMap 2013-12-30 23:39:02 -08:00
Andrew Or 347fafe4fc Fix CheckpointSuite test fail 2013-12-30 13:10:33 -08:00
Andrew Or d6e7910d92 Simplify merge logic based on the invariant that all spills contain unique keys 2013-12-30 13:01:00 -08:00
Andrew Or 2b71ab97c4 Merge pull request from aarondav: Utilize DiskBlockManager pathway for temp file writing
This gives us a couple advantages:

- Uses spark.local.dir and randomly selects a directory/disk.
- Ensure files are deleted on normal DiskBlockManager cleanup.
- Availability of same stats as usual DiskBlockObjectWriter (currenty unused).

Also enable basic cleanup when iterator is fully drained.
Still requires cleanup for operations that fail or don't go through all elements.
2013-12-30 11:01:30 -08:00
Andrew Or 015a510b0a Merge branch 'master' of github.com:andrewor14/incubator-spark 2013-12-29 22:03:47 -08:00
Andrew Or 2a48d71528 Add test suite for ExternalAppendOnlyMap 2013-12-29 21:56:13 -08:00
Andrew Or 4a014dc59c Make serializer a parameter to ExternalAppendOnlyMap 2013-12-29 21:55:53 -08:00
Aaron Davidson e3cac47e65 Use Comparator instead of Ordering
lower object creation costs
2013-12-29 19:58:37 -08:00
Andrew Or 8fbff9f5d0 Address Aaron's comments 2013-12-29 16:22:44 -08:00
Aaron Davidson 2a7b3511f4 Add Apache headers 2013-12-27 10:55:16 -08:00
Andrew Or d0cfbc41e2 Rename spark.shuffle.buffer variables 2013-12-27 00:07:09 -08:00
Andrew Or 8f3175773c Final cleanup 2013-12-26 23:40:08 -08:00
Aaron Davidson 1dc0440c1a Use real serializer & manual ordering 2013-12-26 23:40:08 -08:00
Aaron Davidson 0f66b7f2fc Return efficient iterator if no spillage happened 2013-12-26 23:40:08 -08:00
Andrew Or ec8c5dc644 Sort AppendOnlyMap in-place 2013-12-26 23:40:08 -08:00
Andrew Or a515706d9c Fix streaming JavaAPISuite again 2013-12-26 23:40:07 -08:00
Aaron Davidson 1ffe26c7c0 Fix streaming JavaAPISuite that depended on order 2013-12-26 23:40:07 -08:00
Aaron Davidson 0289eb752a Allow Product2 rather than just tuple kv pairs 2013-12-26 23:40:07 -08:00
Andrew Or 64b2d54a02 Move maps to util, and refactor more 2013-12-26 23:40:07 -08:00
Aaron Davidson 804beb43be SamplingSizeTracker + Map + test suite 2013-12-26 23:40:07 -08:00
Andrew Or 7ad4408255 New minor edits 2013-12-26 23:40:07 -08:00
Aaron Davidson fcc443b3db Minor cleanup for Scala style 2013-12-26 23:40:07 -08:00
Andrew Or 2a2ca2a661 Add toggle for ExternalAppendOnlyMap in Aggregator and CoGroupedRDD 2013-12-26 23:40:07 -08:00
Andrew Or 28685a4820 Provide for cases when mergeCombiners is not specified in ExternalAppendOnlyMap 2013-12-26 23:40:07 -08:00
Andrew Or 17def8cc11 Refactor ExternalAppendOnlyMap to take in KVC instead of just KV 2013-12-26 23:40:07 -08:00
Andrew Or 6a45ec1972 Working ExternalAppendOnlyMap for both CoGroupedRDDs and Aggregator 2013-12-26 23:40:07 -08:00
Andrew Or 97fbb3ec52 Working ExternalAppendOnlyMap for Aggregator, but not for CoGroupedRDD 2013-12-26 23:40:07 -08:00
Matei Zaharia 5e69fc5bb4 Merge pull request #295 from markhamstra/JobProgressListenerNPE
Avoid a lump of coal (NPE) in JobProgressListener's stocking.
2013-12-26 19:10:39 -05:00
Matei Zaharia e240bad03b Merge pull request #296 from witgo/master
Renamed ClusterScheduler to TaskSchedulerImpl for yarn and new-yarn package
2013-12-26 12:30:48 -05:00
liguoqiang b662c88a24 fix this import order 2013-12-26 15:49:33 +08:00
Mark Hamstra c529dceaff Avoid a lump of coal (NPE) in JobProgressListener's stocking. 2013-12-25 23:10:02 -08:00
Matei Zaharia c344ed04c7 Merge pull request #283 from tmyklebu/master
Python bindings for mllib

This pull request contains Python bindings for the regression, clustering, classification, and recommendation tools in mllib.

For each 'train' frontend exposed, there is a Scala stub in PythonMLLibAPI.scala and a Python stub in mllib.py.  The Python stub serialises the input RDD and any vector/matrix arguments into a mutually-understood format and calls the Scala stub.  The Scala stub deserialises the RDD and the vector/matrix arguments, calls the appropriate 'train' function, serialises the resulting model, and returns the serialised model.

ALSModel is slightly different since a MatrixFactorizationModel has RDDs inside.  The Scala stub returns a handle to a Scala MatrixFactorizationModel; prediction is done by calling the Scala predict method.

I have tested these bindings on an x86_64 machine running Linux.  There is a risk that these bindings may fail on some choose-your-own-endian platform if Python's endian differs from java.nio.ByteBuffer's idea of the native byte order.
2013-12-26 01:31:06 -05:00
liguoqiang 2bd76f693d Renamed ClusterScheduler to TaskSchedulerImpl for yarn and new-yarn 2013-12-26 11:10:35 +08:00
liguoqiang 14fcef72db Renamed ClusterScheduler to TaskSchedulerImpl for yarn and new-yarn 2013-12-26 11:05:07 +08:00
Tor Myklebust 9cbcf81453 Remove commented code in __init__.py. 2013-12-25 14:12:42 -05:00
Tor Myklebust 5e71354cb7 Fix copypasta in __init__.py. Don't import anything directly into pyspark.mllib. 2013-12-25 14:10:55 -05:00
Matei Zaharia 56094bcd8d Merge pull request #290 from ash211/patch-3
Typo: avaiable -> available
2013-12-25 13:14:33 -05:00
Reynold Xin 4842a07da8 Merge pull request #287 from azuryyu/master
Fixed job name in the java streaming example.
2013-12-25 01:52:15 -08:00
Tor Myklebust 02208a175c Initial weights in Scala are ones; do that too. Also fix some errors. 2013-12-25 00:53:48 -05:00
Tor Myklebust 4e821390bc Scala stubs for updated Python bindings. 2013-12-25 00:09:00 -05:00
Tor Myklebust 05163057a1 Split the mllib bindings into a whole bunch of modules and rename some things. 2013-12-25 00:08:05 -05:00
Andrew Ash 3665c722b5 Typo: avaiable -> available 2013-12-24 17:25:04 -08:00
Patrick Wendell 85a344b4f0 Merge pull request #127 from kayousterhout/consolidate_schedulers
Deduplicate Local and Cluster schedulers.

The code in LocalScheduler/LocalTaskSetManager was nearly identical
to the code in ClusterScheduler/ClusterTaskSetManager. The redundancy
made making updating the schedulers unnecessarily painful and error-
prone. This commit combines the two into a single TaskScheduler/
TaskSetManager.

Unfortunately the diff makes this change look much more invasive than it is -- TaskScheduler.scala is only superficially changed (names updated, overrides removed) from the old ClusterScheduler.scala, and the same with
TaskSetManager.scala.

Thanks @rxin for suggesting this change!
2013-12-24 16:35:06 -08:00
Patrick Wendell c2dd6bcd6e Merge pull request #279 from aarondav/shuffle-cleanup0
Clean up shuffle files once their metadata is gone

Previously, we would only clean the in-memory metadata for consolidated shuffle files.

Additionally, fixes a bug where the Metadata Cleaner was ignoring type-specific TTLs.
2013-12-24 14:36:47 -08:00
Kay Ousterhout 1efe3adf56 Responded to Reynold's style comments 2013-12-24 14:18:39 -08:00
Tor Myklebust 86e38c4942 Remove useless line from test stub. 2013-12-24 16:49:31 -05:00
Tor Myklebust 4efec6eb94 Python change for move of PythonMLLibAPI. 2013-12-24 16:49:03 -05:00
Tor Myklebust 58e2a7d6d4 Move PythonMLLibAPI into its own package. 2013-12-24 16:48:40 -05:00
Matei Zaharia 3bf7c708d3 Merge pull request #275 from ueshin/wip/changeclasspathorder
Change the order of CLASSPATH.

SPARK_TOOLS_JAR should be placed after CLASSPATH or at least after
SPARK_CLASSPATH.

If SPARK_TOOLS_JAR is placed before CLASSPATH, all assembled classes and
resources in spark-tools-assembly.jar beat those in CLASSPATH or
SPARK_CLASSPATH, which might be replaced by customized versions.
2013-12-24 16:37:13 -05:00
Tor Myklebust 2402180b32 Fix error message ugliness. 2013-12-24 16:18:33 -05:00