## What changes were proposed in this pull request?
A cast expression with a resolved time zone is not equal to a cast expression without a resolved time zone. The `ResolveAggregateFunction` assumed that these expression were the same, and would fail to resolve `HAVING` clauses which contain a `Cast` expression.
This is in essence caused by the fact that a `TimeZoneAwareExpression` can be resolved without a set time zone. This PR fixes this, and makes a `TimeZoneAwareExpression` unresolved as long as it has no TimeZone set.
## How was this patch tested?
Added a regression test to the `SQLQueryTestSuite.having` file.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#17641 from hvanhovell/SPARK-20329.
## What changes were proposed in this pull request?
When infering partitioning schema from paths, the column in parsePartitionColumn should be unescaped with unescapePathName, just like it is being done in e.g. parsePathFragmentAsSeq.
## How was this patch tested?
Added a test to FileIndexSuite.
Author: Juliusz Sompolski <julek@databricks.com>
Closes#17703 from juliuszsompolski/SPARK-20367.
## What changes were proposed in this pull request?
It is kind of annoying that `SharedSQLContext.sparkConf` is a val when overriding test cases, because you cannot call `super` on it. This PR makes it a function.
## How was this patch tested?
Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#17705 from hvanhovell/SPARK-20410.
## What changes were proposed in this pull request?
Address a follow up in [comment](https://github.com/apache/spark/pull/16954#discussion_r105718880)
Currently subqueries with correlated predicates containing aggregate expression having mixture of outer references and local references generate a codegen error like following :
```SQL
SELECT t1a
FROM t1
GROUP BY 1
HAVING EXISTS (SELECT 1
FROM t2
WHERE t2a < min(t1a + t2a));
```
Exception snippet.
```
Cannot evaluate expression: min((input[0, int, false] + input[4, int, false]))
at org.apache.spark.sql.catalyst.expressions.Unevaluable$class.doGenCode(Expression.scala:226)
at org.apache.spark.sql.catalyst.expressions.aggregate.AggregateExpression.doGenCode(interfaces.scala:87)
at org.apache.spark.sql.catalyst.expressions.Expression$$anonfun$genCode$2.apply(Expression.scala:106)
at org.apache.spark.sql.catalyst.expressions.Expression$$anonfun$genCode$2.apply(Expression.scala:103)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.catalyst.expressions.Expression.genCode(Expression.scala:103)
```
After this PR, a better error message is issued.
```
org.apache.spark.sql.AnalysisException
Error in query: Found an aggregate expression in a correlated
predicate that has both outer and local references, which is not supported yet.
Aggregate expression: min((t1.`t1a` + t2.`t2a`)),
Outer references: t1.`t1a`,
Local references: t2.`t2a`.;
```
## How was this patch tested?
Added tests in SQLQueryTestSuite.
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#17636 from dilipbiswal/subquery_followup1.
## What changes were proposed in this pull request?
SharedSQLContext.afterEach now calls DebugFilesystem.assertNoOpenStreams inside eventually.
SQLTestUtils withTempDir calls waitForTasksToFinish before deleting the directory.
## How was this patch tested?
Added new test in ParquetQuerySuite based on the flaky test
Author: Bogdan Raducanu <bogdan@databricks.com>
Closes#17701 from bogdanrdc/SPARK-20407.
## What changes were proposed in this pull request?
It's illegal to have aggregate function in GROUP BY, and we should fail at analysis phase, if this happens.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17704 from cloud-fan/minor.
## What changes were proposed in this pull request?
Dataset.withNewExecutionId is only used in Dataset itself and should be private.
## How was this patch tested?
N/A - this is a simple visibility change.
Author: Reynold Xin <rxin@databricks.com>
Closes#17699 from rxin/SPARK-20405.
### What changes were proposed in this pull request?
Database and Table names conform the Hive standard ("[a-zA-z_0-9]+"), i.e. if this name only contains characters, numbers, and _.
When calling `toLowerCase` on the names, we should add `Locale.ROOT` to the `toLowerCase`for avoiding inadvertent locale-sensitive variation in behavior (aka the "Turkish locale problem").
### How was this patch tested?
Added a test case
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17655 from gatorsmile/locale.
## What changes were proposed in this pull request?
https://issues.apache.org/jira/browse/SPARK-19820 adds a reason field for why tasks were killed. However, for backwards compatibility it left the old TaskKilledException constructor which defaults to "unknown reason".
The range() operator should use the constructor that fills in the reason rather than dropping it on task kill.
## How was this patch tested?
Existing tests, and I tested this manually.
Author: Eric Liang <ekl@databricks.com>
Closes#17692 from ericl/fix-kill-reason-in-range.
## What changes were proposed in this pull request?
Also went through the same file to ensure other string concatenation are correct.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#17691 from zsxwing/fix-error-message.
## What changes were proposed in this pull request?
Apply Complementation Laws during boolean expression simplification.
## How was this patch tested?
Tested using unit tests, integration tests, and manual tests.
Author: ptkool <michael.styles@shopify.com>
Author: Michael Styles <michael.styles@shopify.com>
Closes#17650 from ptkool/apply_complementation_laws.
## What changes were proposed in this pull request?
The output of `InMemoryTableScanExec` can be pruned and mismatch with `InMemoryRelation` and its child plan's output. This causes wrong output partitioning and ordering.
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#17679 from viirya/SPARK-20356.
Avoid necessary execution that can lead to NPE in EliminateOuterJoin and add test in DataFrameSuite to confirm NPE is no longer thrown
## What changes were proposed in this pull request?
Change leftHasNonNullPredicate and rightHasNonNullPredicate to lazy so they are only executed when needed.
## How was this patch tested?
Added test in DataFrameSuite that failed before this fix and now succeeds. Note that a test in catalyst project would be better but i am unsure how to do this.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Koert Kuipers <koert@tresata.com>
Closes#17660 from koertkuipers/feat-catch-npe-in-eliminate-outer-join.
## What changes were proposed in this pull request?
If a plan has multi-level successive joins, e.g.:
```
Join
/ \
Union t5
/ \
Join t4
/ \
Join t3
/ \
t1 t2
```
Currently we fail to reorder the inside joins, i.e. t1, t2, t3.
In join reorder, we use `OrderedJoin` to indicate a join has been ordered, such that when transforming down the plan, these joins don't need to be rerodered again.
But there's a problem in the definition of `OrderedJoin`:
The real join node is a parameter, but not a child. This breaks the transform procedure because `mapChildren` applies transform function on parameters which should be children.
In this patch, we change `OrderedJoin` to a class having the same structure as a join node.
## How was this patch tested?
Add a corresponding test case.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17668 from wzhfy/recursiveReorder.
## What changes were proposed in this pull request?
fix typo
## How was this patch tested?
manual
Author: Felix Cheung <felixcheung_m@hotmail.com>
Closes#17663 from felixcheung/likedoctypo.
## What changes were proposed in this pull request?
Replace non-existent `repartitionBy` with `distribute` in `CollapseRepartitionSuite`.
## How was this patch tested?
local build and `catalyst/testOnly *CollapseRepartitionSuite`
Author: Jacek Laskowski <jacek@japila.pl>
Closes#17657 from jaceklaskowski/CollapseRepartitionSuite.
## What changes were proposed in this pull request?
This patch fixes a bug in the way LIKE patterns are translated to Java regexes. The bug causes any character following an escaped backslash to be escaped, i.e. there is double-escaping.
A concrete example is the following pattern:`'%\\%'`. The expected Java regex that this pattern should correspond to (according to the behavior described below) is `'.*\\.*'`, however the current situation leads to `'.*\\%'` instead.
---
Update: in light of the discussion that ensued, we should explicitly define the expected behaviour of LIKE expressions, especially in certain edge cases. With the help of gatorsmile, we put together a list of different RDBMS and their variations wrt to certain standard features.
| RDBMS\Features | Wildcards | Default escape [1] | Case sensitivity |
| --- | --- | --- | --- |
| [MS SQL Server](https://msdn.microsoft.com/en-us/library/ms179859.aspx) | _, %, [], [^] | none | no |
| [Oracle](https://docs.oracle.com/cd/B12037_01/server.101/b10759/conditions016.htm) | _, % | none | yes |
| [DB2 z/OS](http://www.ibm.com/support/knowledgecenter/SSEPEK_11.0.0/sqlref/src/tpc/db2z_likepredicate.html) | _, % | none | yes |
| [MySQL](http://dev.mysql.com/doc/refman/5.7/en/string-comparison-functions.html) | _, % | none | no |
| [PostreSQL](https://www.postgresql.org/docs/9.0/static/functions-matching.html) | _, % | \ | yes |
| [Hive](https://cwiki.apache.org/confluence/display/Hive/LanguageManual+UDF) | _, % | none | yes |
| Current Spark | _, % | \ | yes |
[1] Default escape character: most systems do not have a default escape character, instead the user can specify one by calling a like expression with an escape argument [A] LIKE [B] ESCAPE [C]. This syntax is currently not supported by Spark, however I would volunteer to implement this feature in a separate ticket.
The specifications are often quite terse and certain scenarios are undocumented, so here is a list of scenarios that I am uncertain about and would appreciate any input. Specifically I am looking for feedback on whether or not Spark's current behavior should be changed.
1. [x] Ending a pattern with the escape sequence, e.g. `like 'a\'`.
PostreSQL gives an error: 'LIKE pattern must not end with escape character', which I personally find logical. Currently, Spark allows "non-terminated" escapes and simply ignores them as part of the pattern.
According to [DB2's documentation](http://www.ibm.com/support/knowledgecenter/SSEPGG_9.7.0/com.ibm.db2.luw.messages.sql.doc/doc/msql00130n.html), ending a pattern in an escape character is invalid.
_Proposed new behaviour in Spark: throw AnalysisException_
2. [x] Empty input, e.g. `'' like ''`
Postgres and DB2 will match empty input only if the pattern is empty as well, any other combination of empty input will not match. Spark currently follows this rule.
3. [x] Escape before a non-special character, e.g. `'a' like '\a'`.
Escaping a non-wildcard character is not really documented but PostgreSQL just treats it verbatim, which I also find the least surprising behavior. Spark does the same.
According to [DB2's documentation](http://www.ibm.com/support/knowledgecenter/SSEPGG_9.7.0/com.ibm.db2.luw.messages.sql.doc/doc/msql00130n.html), it is invalid to follow an escape character with anything other than an escape character, an underscore or a percent sign.
_Proposed new behaviour in Spark: throw AnalysisException_
The current specification is also described in the operator's source code in this patch.
## How was this patch tested?
Extra case in regex unit tests.
Author: Jakob Odersky <jakob@odersky.com>
This patch had conflicts when merged, resolved by
Committer: Reynold Xin <rxin@databricks.com>
Closes#15398 from jodersky/SPARK-17647.
### What changes were proposed in this pull request?
The session catalog caches some persistent functions in the `FunctionRegistry`, so there can be duplicates. Our Catalog API `listFunctions` does not handle it.
It would be better if `SessionCatalog` API can de-duplciate the records, instead of doing it by each API caller. In `FunctionRegistry`, our functions are identified by the unquoted string. Thus, this PR is try to parse it using our parser interface and then de-duplicate the names.
### How was this patch tested?
Added test cases.
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17646 from gatorsmile/showFunctions.
### What changes were proposed in this pull request?
```JAVA
/**
* Certain optimizations should not be applied if UDF is not deterministic.
* Deterministic UDF returns same result each time it is invoked with a
* particular input. This determinism just needs to hold within the context of
* a query.
*
* return true if the UDF is deterministic
*/
boolean deterministic() default true;
```
Based on the definition of [UDFType](https://github.com/apache/hive/blob/master/ql/src/java/org/apache/hadoop/hive/ql/udf/UDFType.java#L42-L50), when Hive UDF's children are non-deterministic, Hive UDF is also non-deterministic.
### How was this patch tested?
Added test cases.
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17635 from gatorsmile/udfDeterministic.
## What changes were proposed in this pull request?
In https://github.com/apache/spark/pull/17398 we introduced `UnresolvedMapObjects` as a placeholder of `MapObjects`. Unfortunately `UnresolvedMapObjects` is not serializable as its `function` may reference Scala `Type` which is not serializable.
Ideally this is fine, as we will never serialize and send unresolved expressions to executors. However users may accidentally do this, e.g. mistakenly reference an encoder instance when implementing `Aggregator`, we should fix it so that it's just a performance issue(more network traffic) and should not fail the query.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17639 from cloud-fan/minor.
## What changes were proposed in this pull request?
val and var should strictly follow the Scala syntax
## How was this patch tested?
manual test and exisiting test cases
Author: ouyangxiaochen <ou.yangxiaochen@zte.com.cn>
Closes#17628 from ouyangxiaochen/spark-413.
## What changes were proposed in this pull request?
Currently when estimating predicates like col > literal or col = literal, we will update min or max in column stats based on literal value. However, literal value is of Catalyst type (internal type), while min/max is of external type. Then for the next predicate, we again need to do type conversion to compare and update column stats. This is awkward and causes many unnecessary conversions in estimation.
To solve this, we use Catalyst type for min/max in `ColumnStat`. Note that the persistent format in metastore is still of external type, so there's no inconsistency for statistics in metastore.
This pr also fixes a bug for boolean type in `IN` condition.
## How was this patch tested?
The changes for ColumnStat are covered by existing tests.
For bug fix, a new test for boolean type in IN condition is added
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17630 from wzhfy/refactorColumnStat.
## What changes were proposed in this pull request?
have the`FileFormatWriter.ExecuteWriteTask.releaseResources()` implementations set `currentWriter=null` in a finally clause. This guarantees that if the first call to `currentWriter()` throws an exception, the second releaseResources() call made during the task cancel process will not trigger a second attempt to close the stream.
## How was this patch tested?
Tricky. I've been fixing the underlying cause when I saw the problem [HADOOP-14204](https://issues.apache.org/jira/browse/HADOOP-14204), but SPARK-10109 shows I'm not the first to have seen this. I can't replicate it locally any more, my code no longer being broken.
code review, however, should be straightforward
Author: Steve Loughran <stevel@hortonworks.com>
Closes#17364 from steveloughran/stevel/SPARK-20038-close.
## What changes were proposed in this pull request?
Some Structured Streaming tests show flakiness such as:
```
[info] - prune results by current_date, complete mode - 696 *** FAILED *** (10 seconds, 937 milliseconds)
[info] Timed out while stopping and waiting for microbatchthread to terminate.: The code passed to failAfter did not complete within 10 seconds.
```
This happens when we wait for the stream to stop, but it doesn't. The reason it doesn't stop is that we interrupt the microBatchThread, but Hadoop's `Shell.runCommand` swallows the interrupt exception, and the exception is not propagated upstream to the microBatchThread. Then this thread continues to run, only to start blocking on the `streamManualClock`.
## How was this patch tested?
Thousand retries locally and [Jenkins](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/75720/testReport) of the flaky tests
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#17613 from brkyvz/flaky-stream-agg.
## What changes were proposed in this pull request?
AssertNotNull's toString/simpleString dumps the entire walkedTypePath. walkedTypePath is used for error message reporting and shouldn't be part of the output.
## How was this patch tested?
Manually tested.
Author: Reynold Xin <rxin@databricks.com>
Closes#17616 from rxin/SPARK-20304.
### What changes were proposed in this pull request?
Session catalog API `createTempFunction` is being used by Hive build-in functions, persistent functions, and temporary functions. Thus, the name is confusing. This PR is to rename it by `registerFunction`. Also we can move construction of `FunctionBuilder` and `ExpressionInfo` into the new `registerFunction`, instead of duplicating the logics everywhere.
In the next PRs, the remaining Function-related APIs also need cleanups.
### How was this patch tested?
Existing test cases.
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17615 from gatorsmile/cleanupCreateTempFunction.
## What changes were proposed in this pull request?
This PR proposes to run Spark unidoc to test Javadoc 8 build as Javadoc 8 is easily re-breakable.
There are several problems with it:
- It introduces little extra bit of time to run the tests. In my case, it took 1.5 mins more (`Elapsed :[94.8746569157]`). How it was tested is described in "How was this patch tested?".
- > One problem that I noticed was that Unidoc appeared to be processing test sources: if we can find a way to exclude those from being processed in the first place then that might significantly speed things up.
(see joshrosen's [comment](https://issues.apache.org/jira/browse/SPARK-18692?focusedCommentId=15947627&page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel#comment-15947627))
To complete this automated build, It also suggests to fix existing Javadoc breaks / ones introduced by test codes as described above.
There fixes are similar instances that previously fixed. Please refer https://github.com/apache/spark/pull/15999 and https://github.com/apache/spark/pull/16013
Note that this only fixes **errors** not **warnings**. Please see my observation https://github.com/apache/spark/pull/17389#issuecomment-288438704 for spurious errors by warnings.
## How was this patch tested?
Manually via `jekyll build` for building tests. Also, tested via running `./dev/run-tests`.
This was tested via manually adding `time.time()` as below:
```diff
profiles_and_goals = build_profiles + sbt_goals
print("[info] Building Spark unidoc (w/Hive 1.2.1) using SBT with these arguments: ",
" ".join(profiles_and_goals))
+ import time
+ st = time.time()
exec_sbt(profiles_and_goals)
+ print("Elapsed :[%s]" % str(time.time() - st))
```
produces
```
...
========================================================================
Building Unidoc API Documentation
========================================================================
...
[info] Main Java API documentation successful.
...
Elapsed :[94.8746569157]
...
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17477 from HyukjinKwon/SPARK-18692.
## What changes were proposed in this pull request?
Update count distinct error message for streaming datasets/dataframes to match current behavior. These aggregations are not yet supported, regardless of whether the dataset/dataframe is aggregated.
Author: jtoka <jason.tokayer@gmail.com>
Closes#17609 from jtoka/master.
## What changes were proposed in this pull request?
When we perform a cast expression and the from and to types are structurally the same (having the same structure but different field names), we should be able to skip the actual cast.
## How was this patch tested?
Added unit tests for the newly introduced functions.
Author: Reynold Xin <rxin@databricks.com>
Closes#17614 from rxin/SPARK-20302.
## What changes were proposed in this pull request?
This PR proposes corrections related to JSON APIs as below:
- Rendering links in Python documentation
- Replacing `RDD` to `Dataset` in programing guide
- Adding missing description about JSON Lines consistently in `DataFrameReader.json` in Python API
- De-duplicating little bit of `DataFrameReader.json` in Scala/Java API
## How was this patch tested?
Manually build the documentation via `jekyll build`. Corresponding snapstops will be left on the codes.
Note that currently there are Javadoc8 breaks in several places. These are proposed to be handled in https://github.com/apache/spark/pull/17477. So, this PR does not fix those.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17602 from HyukjinKwon/minor-json-documentation.
## What changes were proposed in this pull request?
`NaNvl(float value, null)` will be converted into `NaNvl(float value, Cast(null, DoubleType))` and finally `NaNvl(Cast(float value, DoubleType), Cast(null, DoubleType))`.
This will cause mismatching in the output type when the input type is float.
By adding extra rule in TypeCoercion can resolve this issue.
## How was this patch tested?
unite tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: DB Tsai <dbt@netflix.com>
Closes#17606 from dbtsai/fixNaNvl.
## What changes were proposed in this pull request?
Dataset typed API currently uses NewInstance to box primitive types (i.e. calling the constructor). Instead, it'd be slightly more idiomatic in Java to use PrimitiveType.valueOf, which can be invoked using StaticInvoke expression.
## How was this patch tested?
The change should be covered by existing tests for Dataset encoders.
Author: Reynold Xin <rxin@databricks.com>
Closes#17604 from rxin/SPARK-20289.
## What changes were proposed in this pull request?
Similar to `ListQuery`, `Exists` should not be evaluated in `Join` operator too.
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#17491 from viirya/dont-push-exists-to-join.
## What changes were proposed in this pull request?
This is a regression caused by SPARK-19716.
Before SPARK-19716, we will cast an array field to the expected array type. However, after SPARK-19716, the cast is removed, but we forgot to push the cast to the element level.
## How was this patch tested?
new regression tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17587 from cloud-fan/array.
## What changes were proposed in this pull request?
We currently have postHocOptimizationBatches, but not preOptimizationBatches. This patch adds preOptimizationBatches so the optimizer debugging extensions are symmetric.
## How was this patch tested?
N/A
Author: Reynold Xin <rxin@databricks.com>
Closes#17595 from rxin/SPARK-20283.
## What changes were proposed in this pull request?
This PR fixes the following failure:
```
sbt.ForkMain$ForkError: org.scalatest.exceptions.TestFailedException:
Assert on query failed:
== Progress ==
AssertOnQuery(<condition>, )
StopStream
AddData to MemoryStream[value#30891]: 1,2
StartStream(OneTimeTrigger,org.apache.spark.util.SystemClock35cdc93a,Map())
CheckAnswer: [6],[3]
StopStream
=> AssertOnQuery(<condition>, )
AssertOnQuery(<condition>, )
StartStream(OneTimeTrigger,org.apache.spark.util.SystemClockcdb247d,Map())
CheckAnswer: [6],[3]
StopStream
AddData to MemoryStream[value#30891]: 3
StartStream(OneTimeTrigger,org.apache.spark.util.SystemClock55394e4d,Map())
CheckLastBatch: [2]
StopStream
AddData to MemoryStream[value#30891]: 0
StartStream(OneTimeTrigger,org.apache.spark.util.SystemClock749aa997,Map())
ExpectFailure[org.apache.spark.SparkException, isFatalError: false]
AssertOnQuery(<condition>, )
AssertOnQuery(<condition>, incorrect start offset or end offset on exception)
== Stream ==
Output Mode: Append
Stream state: not started
Thread state: dead
== Sink ==
0: [6] [3]
== Plan ==
at org.scalatest.Assertions$class.newAssertionFailedException(Assertions.scala:495)
at org.scalatest.FunSuite.newAssertionFailedException(FunSuite.scala:1555)
at org.scalatest.Assertions$class.fail(Assertions.scala:1328)
at org.scalatest.FunSuite.fail(FunSuite.scala:1555)
at org.apache.spark.sql.streaming.StreamTest$class.failTest$1(StreamTest.scala:347)
at org.apache.spark.sql.streaming.StreamTest$class.verify$1(StreamTest.scala:318)
at org.apache.spark.sql.streaming.StreamTest$$anonfun$liftedTree1$1$1.apply(StreamTest.scala:483)
at org.apache.spark.sql.streaming.StreamTest$$anonfun$liftedTree1$1$1.apply(StreamTest.scala:357)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.sql.streaming.StreamTest$class.liftedTree1$1(StreamTest.scala:357)
at org.apache.spark.sql.streaming.StreamTest$class.testStream(StreamTest.scala:356)
at org.apache.spark.sql.streaming.StreamingQuerySuite.testStream(StreamingQuerySuite.scala:41)
at org.apache.spark.sql.streaming.StreamingQuerySuite$$anonfun$6.apply$mcV$sp(StreamingQuerySuite.scala:166)
at org.apache.spark.sql.streaming.StreamingQuerySuite$$anonfun$6.apply(StreamingQuerySuite.scala:161)
at org.apache.spark.sql.streaming.StreamingQuerySuite$$anonfun$6.apply(StreamingQuerySuite.scala:161)
at org.apache.spark.sql.catalyst.util.package$.quietly(package.scala:42)
at org.apache.spark.sql.test.SQLTestUtils$$anonfun$testQuietly$1.apply$mcV$sp(SQLTestUtils.scala:268)
at org.apache.spark.sql.test.SQLTestUtils$$anonfun$testQuietly$1.apply(SQLTestUtils.scala:268)
at org.apache.spark.sql.test.SQLTestUtils$$anonfun$testQuietly$1.apply(SQLTestUtils.scala:268)
at org.scalatest.Transformer$$anonfun$apply$1.apply$mcV$sp(Transformer.scala:22)
at org.scalatest.OutcomeOf$class.outcomeOf(OutcomeOf.scala:85)
at org.scalatest.OutcomeOf$.outcomeOf(OutcomeOf.scala:104)
at org.scalatest.Transformer.apply(Transformer.scala:22)
at org.scalatest.Transformer.apply(Transformer.scala:20)
at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:166)
at org.apache.spark.SparkFunSuite.withFixture(SparkFunSuite.scala:68)
at org.scalatest.FunSuiteLike$class.invokeWithFixture$1(FunSuiteLike.scala:163)
at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:175)
at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:175)
at org.scalatest.SuperEngine.runTestImpl(Engine.scala:306)
at org.scalatest.FunSuiteLike$class.runTest(FunSuiteLike.scala:175)
at org.apache.spark.sql.streaming.StreamingQuerySuite.org$scalatest$BeforeAndAfterEach$$super$runTest(StreamingQuerySuite.scala:41)
at org.scalatest.BeforeAndAfterEach$class.runTest(BeforeAndAfterEach.scala:255)
at org.apache.spark.sql.streaming.StreamingQuerySuite.org$scalatest$BeforeAndAfter$$super$runTest(StreamingQuerySuite.scala:41)
at org.scalatest.BeforeAndAfter$class.runTest(BeforeAndAfter.scala:200)
at org.apache.spark.sql.streaming.StreamingQuerySuite.runTest(StreamingQuerySuite.scala:41)
at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:208)
at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:208)
at org.scalatest.SuperEngine$$anonfun$traverseSubNodes$1$1.apply(Engine.scala:413)
at org.scalatest.SuperEngine$$anonfun$traverseSubNodes$1$1.apply(Engine.scala:401)
at scala.collection.immutable.List.foreach(List.scala:381)
at org.scalatest.SuperEngine.traverseSubNodes$1(Engine.scala:401)
at org.scalatest.SuperEngine.org$scalatest$SuperEngine$$runTestsInBranch(Engine.scala:396)
at org.scalatest.SuperEngine.runTestsImpl(Engine.scala:483)
at org.scalatest.FunSuiteLike$class.runTests(FunSuiteLike.scala:208)
at org.scalatest.FunSuite.runTests(FunSuite.scala:1555)
at org.scalatest.Suite$class.run(Suite.scala:1424)
at org.scalatest.FunSuite.org$scalatest$FunSuiteLike$$super$run(FunSuite.scala:1555)
at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:212)
at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:212)
at org.scalatest.SuperEngine.runImpl(Engine.scala:545)
at org.scalatest.FunSuiteLike$class.run(FunSuiteLike.scala:212)
at org.apache.spark.SparkFunSuite.org$scalatest$BeforeAndAfterAll$$super$run(SparkFunSuite.scala:31)
at org.scalatest.BeforeAndAfterAll$class.liftedTree1$1(BeforeAndAfterAll.scala:257)
at org.scalatest.BeforeAndAfterAll$class.run(BeforeAndAfterAll.scala:256)
at org.apache.spark.sql.streaming.StreamingQuerySuite.org$scalatest$BeforeAndAfter$$super$run(StreamingQuerySuite.scala:41)
at org.scalatest.BeforeAndAfter$class.run(BeforeAndAfter.scala:241)
at org.apache.spark.sql.streaming.StreamingQuerySuite.run(StreamingQuerySuite.scala:41)
at org.scalatest.tools.Framework.org$scalatest$tools$Framework$$runSuite(Framework.scala:357)
at org.scalatest.tools.Framework$ScalaTestTask.execute(Framework.scala:502)
at sbt.ForkMain$Run$2.call(ForkMain.java:296)
at sbt.ForkMain$Run$2.call(ForkMain.java:286)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
```
The failure is because `CheckAnswer` will run once `committedOffsets` is updated. Then writing the commit log may be interrupted by the following `StopStream`.
This PR just change the order to write the commit log first.
## How was this patch tested?
Jenkins
Author: Shixiong Zhu <shixiong@databricks.com>
Closes#17594 from zsxwing/SPARK-20282.
## What changes were proposed in this pull request?
Weigher.weigh needs to return Int but it is possible for an Array[FileStatus] to have size > Int.maxValue. To avoid this, the size is scaled down by a factor of 32. The maximumWeight of the cache is also scaled down by the same factor.
## How was this patch tested?
New test in FileIndexSuite
Author: Bogdan Raducanu <bogdan@databricks.com>
Closes#17591 from bogdanrdc/SPARK-20280.
## What changes were proposed in this pull request?
Add Locale.ROOT to internal calls to String `toLowerCase`, `toUpperCase`, to avoid inadvertent locale-sensitive variation in behavior (aka the "Turkish locale problem").
The change looks large but it is just adding `Locale.ROOT` (the locale with no country or language specified) to every call to these methods.
## How was this patch tested?
Existing tests.
Author: Sean Owen <sowen@cloudera.com>
Closes#17527 from srowen/SPARK-20156.
## What changes were proposed in this pull request?
```
sql("SELECT t1.b, rand(0) as r FROM cachedData, cachedData t1 GROUP BY t1.b having r > 0.5").show()
```
We will get the following error:
```
Job aborted due to stage failure: Task 1 in stage 4.0 failed 1 times, most recent failure: Lost task 1.0 in stage 4.0 (TID 8, localhost, executor driver): java.lang.NullPointerException
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificPredicate.eval(Unknown Source)
at org.apache.spark.sql.execution.joins.BroadcastNestedLoopJoinExec$$anonfun$org$apache$spark$sql$execution$joins$BroadcastNestedLoopJoinExec$$boundCondition$1.apply(BroadcastNestedLoopJoinExec.scala:87)
at org.apache.spark.sql.execution.joins.BroadcastNestedLoopJoinExec$$anonfun$org$apache$spark$sql$execution$joins$BroadcastNestedLoopJoinExec$$boundCondition$1.apply(BroadcastNestedLoopJoinExec.scala:87)
at scala.collection.Iterator$$anon$13.hasNext(Iterator.scala:463)
```
Filters could be pushed down to the join conditions by the optimizer rule `PushPredicateThroughJoin`. However, Analyzer [blocks users to add non-deterministics conditions](https://github.com/apache/spark/blob/master/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/analysis/CheckAnalysis.scala#L386-L395) (For details, see the PR https://github.com/apache/spark/pull/7535).
We should not push down non-deterministic conditions; otherwise, we need to explicitly initialize the non-deterministic expressions. This PR is to simply block it.
### How was this patch tested?
Added a test case
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17585 from gatorsmile/joinRandCondition.
## What changes were proposed in this pull request?
This PR proposes to add `IGNORE NULLS` keyword in `first`/`last` in Spark's parser likewise http://docs.oracle.com/cd/B19306_01/server.102/b14200/functions057.htm. This simply maps the keywords to existing `ignoreNullsExpr`.
**Before**
```scala
scala> sql("select first('a' IGNORE NULLS)").show()
```
```
org.apache.spark.sql.catalyst.parser.ParseException:
extraneous input 'NULLS' expecting {')', ','}(line 1, pos 24)
== SQL ==
select first('a' IGNORE NULLS)
------------------------^^^
at org.apache.spark.sql.catalyst.parser.ParseException.withCommand(ParseDriver.scala:210)
at org.apache.spark.sql.catalyst.parser.AbstractSqlParser.parse(ParseDriver.scala:112)
at org.apache.spark.sql.execution.SparkSqlParser.parse(SparkSqlParser.scala:46)
at org.apache.spark.sql.catalyst.parser.AbstractSqlParser.parsePlan(ParseDriver.scala:66)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:622)
... 48 elided
```
**After**
```scala
scala> sql("select first('a' IGNORE NULLS)").show()
```
```
+--------------+
|first(a, true)|
+--------------+
| a|
+--------------+
```
## How was this patch tested?
Unit tests in `ExpressionParserSuite`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17566 from HyukjinKwon/SPARK-19518.
## What changes were proposed in this pull request?
Like `Expression`, `QueryPlan` should also have a `semanticHash` method, then we can put plans to a hash map and look it up fast. This PR refactors `QueryPlan` to follow `Expression` and put all the normalization logic in `QueryPlan.canonicalized`, so that it's very natural to implement `semanticHash`.
follow-up: improve `CacheManager` to leverage this `semanticHash` and speed up plan lookup, instead of iterating all cached plans.
## How was this patch tested?
existing tests. Note that we don't need to test the `semanticHash` method, once the existing tests prove `sameResult` is correct, we are good.
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17541 from cloud-fan/plan-semantic.
## What changes were proposed in this pull request?
This bug was partially addressed in SPARK-18555 https://github.com/apache/spark/pull/15994, but the root cause isn't completely solved. This bug is pretty critical since it changes the member id in Long in our application if the member id can not be represented by Double losslessly when the member id is very big.
Here is an example how this happens, with
```
Seq[(java.lang.Long, java.lang.Double)]((null, 3.14), (9123146099426677101L, null),
(9123146560113991650L, 1.6), (null, null)).toDF("a", "b").na.fill(0.2),
```
the logical plan will be
```
== Analyzed Logical Plan ==
a: bigint, b: double
Project [cast(coalesce(cast(a#232L as double), cast(0.2 as double)) as bigint) AS a#240L, cast(coalesce(nanvl(b#233, cast(null as double)), 0.2) as double) AS b#241]
+- Project [_1#229L AS a#232L, _2#230 AS b#233]
+- LocalRelation [_1#229L, _2#230]
```
Note that even the value is not null, Spark will cast the Long into Double first. Then if it's not null, Spark will cast it back to Long which results in losing precision.
The behavior should be that the original value should not be changed if it's not null, but Spark will change the value which is wrong.
With the PR, the logical plan will be
```
== Analyzed Logical Plan ==
a: bigint, b: double
Project [coalesce(a#232L, cast(0.2 as bigint)) AS a#240L, coalesce(nanvl(b#233, cast(null as double)), cast(0.2 as double)) AS b#241]
+- Project [_1#229L AS a#232L, _2#230 AS b#233]
+- LocalRelation [_1#229L, _2#230]
```
which behaves correctly without changing the original Long values and also avoids extra cost of unnecessary casting.
## How was this patch tested?
unit test added.
+cc srowen rxin cloud-fan gatorsmile
Thanks.
Author: DB Tsai <dbt@netflix.com>
Closes#17577 from dbtsai/fixnafill.
## What changes were proposed in this pull request?
sq/core module currently declares asm as a test scope dependency. Transitively it should actually be a normal dependency since the actual core module defines it. This occasionally confuses IntelliJ.
## How was this patch tested?
N/A - This is a build change.
Author: Reynold Xin <rxin@databricks.com>
Closes#17574 from rxin/SPARK-20264.
## What changes were proposed in this pull request?
This error message doesn't get properly formatted because of a missing `s`. Currently the error looks like:
```
Caused by: java.lang.IllegalArgumentException: requirement failed: indices should be one-based and in ascending order; found current=$current, previous=$previous; line="$line"
```
(note the literal `$current` instead of the interpolated value)
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Vijay Ramesh <vramesh@demandbase.com>
Closes#17572 from vijaykramesh/master.
## What changes were proposed in this pull request?
AssertNotNull currently throws RuntimeException. It should throw NullPointerException, which is more specific.
## How was this patch tested?
N/A
Author: Reynold Xin <rxin@databricks.com>
Closes#17573 from rxin/SPARK-20262.
## What changes were proposed in this pull request?
Similar to `Project`, when `Aggregate` has non-deterministic expressions, we should not push predicate down through it, as it will change the number of input rows and thus change the evaluation result of non-deterministic expressions in `Aggregate`.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17562 from cloud-fan/filter.
## What changes were proposed in this pull request
Trying to get a grip on the `FileIndex` hierarchy, I was confused by the following inconsistency:
On the one hand, `PartitioningAwareFileIndex` defines `leafFiles` and `leafDirToChildrenFiles` as abstract, but on the other it fully implements `listLeafFiles` which does all the listing of files. However, the latter is only used by `InMemoryFileIndex`.
I'm hereby proposing to move this method (and all its dependencies) to the implementation class that actually uses it, and thus unclutter the `PartitioningAwareFileIndex` interface.
## How was this patch tested?
`./build/sbt sql/test`
Author: Adrian Ionescu <adrian@databricks.com>
Closes#17570 from adrian-ionescu/list-leaf-files.
## What changes were proposed in this pull request?
Currently `LogicalRelation` has a `expectedOutputAttributes` parameter, which makes it hard to reason about what the actual output is. Like other leaf nodes, `LogicalRelation` should also take `output` as a parameter, to simplify the logic
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17552 from cloud-fan/minor.
## What changes were proposed in this pull request?
This is a tiny addendum to SPARK-19495 to remove the private visibility for copy, which is the only package private method in the entire file.
## How was this patch tested?
N/A - no semantic change.
Author: Reynold Xin <rxin@databricks.com>
Closes#17555 from rxin/SPARK-19495-2.
## What changes were proposed in this pull request?
Update doc to remove external for createTable, add refreshByPath in python
## How was this patch tested?
manual
Author: Felix Cheung <felixcheung_m@hotmail.com>
Closes#17512 from felixcheung/catalogdoc.
## What changes were proposed in this pull request?
This commit moves star schema code from ```join.scala``` to ```StarSchemaDetection.scala```. It also applies some minor fixes in ```StarJoinReorderSuite.scala```.
## How was this patch tested?
Run existing ```StarJoinReorderSuite.scala```.
Author: Ioana Delaney <ioanamdelaney@gmail.com>
Closes#17544 from ioana-delaney/starSchemaCBOv2.
## What changes were proposed in this pull request?
Make sure SESSION_LOCAL_TIMEZONE reflects the change in JVM's default timezone setting. Currently several timezone related tests fail as the change to default timezone is not picked up by SQLConf.
## How was this patch tested?
Added an unit test in ConfigEntrySuite
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#17537 from dilipbiswal/timezone_debug.
## What changes were proposed in this pull request?
- Fixed bug in Java API not passing timeout conf to scala API
- Updated markdown docs
- Updated scala docs
- Added scala and Java example
## How was this patch tested?
Manually ran examples.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#17539 from tdas/SPARK-20224.
## What changes were proposed in this pull request?
Fix typo in tpcds q77.sql
## How was this patch tested?
N/A
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17538 from wzhfy/typoQ77.
## What changes were proposed in this pull request?
For large trigger intervals (e.g. 10 minutes), if a batch takes 11 minutes, then it will wait for 9 mins before starting the next batch. This does not make sense. The processing time based trigger policy should be to do process batches as fast as possible, but no faster than 1 in every trigger interval. If batches are taking longer than trigger interval anyways, then no point waiting extra trigger interval.
In this PR, I modified the ProcessingTimeExecutor to do so. Another minor change I did was to extract our StreamManualClock into a separate class so that it can be used outside subclasses of StreamTest. For example, ProcessingTimeExecutorSuite does not need to create any context for testing, just needs the StreamManualClock.
## How was this patch tested?
Added new unit tests to comprehensively test this behavior.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#17525 from tdas/SPARK-20209.
## What changes were proposed in this pull request?
Previously when we construct deserializer expression for array type, we will first cast the corresponding field to expected array type and then apply `MapObjects`.
However, by doing that, we lose the opportunity to do by-name resolution for struct type inside array type. In this PR, I introduce a `UnresolvedMapObjects` to hold the lambda function and the input array expression. Then during analysis, after the input array expression is resolved, we get the actual array element type and apply by-name resolution. Then we don't need to add `Cast` for array type when constructing the deserializer expression, as the element type is determined later at analyzer.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17398 from cloud-fan/dataset.
## What changes were proposed in this pull request?
This is a follow-up of https://github.com/apache/spark/pull/17285 .
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17521 from cloud-fan/conf.
### What changes were proposed in this pull request?
Observed by felixcheung , in `SparkSession`.`Catalog` APIs, we have different conventions/rules for table/function identifiers/names. Most APIs accept the qualified name (i.e., `databaseName`.`tableName` or `databaseName`.`functionName`). However, the following five APIs do not accept it.
- def listColumns(tableName: String): Dataset[Column]
- def getTable(tableName: String): Table
- def getFunction(functionName: String): Function
- def tableExists(tableName: String): Boolean
- def functionExists(functionName: String): Boolean
To make them consistent with the other Catalog APIs, this PR does the changes, updates the function/API comments and adds the `params` to clarify the inputs we allow.
### How was this patch tested?
Added the test cases .
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17518 from gatorsmile/tableIdentifier.
### What changes were proposed in this pull request?
This PR is to unify and clean up the outputs of `DESC EXTENDED/FORMATTED` and `SHOW TABLE EXTENDED` by moving the logics into the Catalog interface. The output formats are improved. We also add the missing attributes. It impacts the DDL commands like `SHOW TABLE EXTENDED`, `DESC EXTENDED` and `DESC FORMATTED`.
In addition, by following what we did in Dataset API `printSchema`, we can use `treeString` to show the schema in the more readable way.
Below is the current way:
```
Schema: STRUCT<`a`: STRING (nullable = true), `b`: INT (nullable = true), `c`: STRING (nullable = true), `d`: STRING (nullable = true)>
```
After the change, it should look like
```
Schema: root
|-- a: string (nullable = true)
|-- b: integer (nullable = true)
|-- c: string (nullable = true)
|-- d: string (nullable = true)
```
### How was this patch tested?
`describe.sql` and `show-tables.sql`
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17394 from gatorsmile/descFollowUp.
## What changes were proposed in this pull request?
**Description** from JIRA
The TimestampType in Spark SQL is of microsecond precision. Ideally, we should convert Spark SQL timestamp values into Parquet TIMESTAMP_MICROS. But unfortunately parquet-mr hasn't supported it yet.
For the read path, we should be able to read TIMESTAMP_MILLIS Parquet values and pad a 0 microsecond part to read values.
For the write path, currently we are writing timestamps as INT96, similar to Impala and Hive. One alternative is that, we can have a separate SQL option to let users be able to write Spark SQL timestamp values as TIMESTAMP_MILLIS. Of course, in this way the microsecond part will be truncated.
## How was this patch tested?
Added new tests in ParquetQuerySuite and ParquetIOSuite
Author: Dilip Biswal <dbiswal@us.ibm.com>
Closes#15332 from dilipbiswal/parquet-time-millis.
## What changes were proposed in this pull request?
In SQL queries, we also see predicate expressions involving two columns such as "column-1 (op) column-2" where column-1 and column-2 belong to same table. Note that, if column-1 and column-2 belong to different tables, then it is a join operator's work, NOT a filter operator's work.
This PR estimates filter selectivity on two columns of same table. For example, multiple tpc-h queries have this predicate "WHERE l_commitdate < l_receiptdate"
## How was this patch tested?
We added 6 new test cases to test various logical predicates involving two columns of same table.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Ron Hu <ron.hu@huawei.com>
Author: U-CHINA\r00754707 <r00754707@R00754707-SC04.china.huawei.com>
Closes#17415 from ron8hu/filterTwoColumns.
## What changes were proposed in this pull request?
Range in SQL should be case insensitive
## How was this patch tested?
unit test
Author: samelamin <hussam.elamin@gmail.com>
Author: samelamin <sam_elamin@discovery.com>
Closes#17487 from samelamin/SPARK-20145.
## What changes were proposed in this pull request?
This patch implements `listPartitionsByFilter()` for `InMemoryCatalog` and thus resolves an outstanding TODO causing the `PruneFileSourcePartitions` optimizer rule not to apply when "spark.sql.catalogImplementation" is set to "in-memory" (which is the default).
The change is straightforward: it extracts the code for further filtering of the list of partitions returned by the metastore's `getPartitionsByFilter()` out from `HiveExternalCatalog` into `ExternalCatalogUtils` and calls this new function from `InMemoryCatalog` on the whole list of partitions.
Now that this method is implemented we can always pass the `CatalogTable` to the `DataSource` in `FindDataSourceTable`, so that the latter is resolved to a relation with a `CatalogFileIndex`, which is what the `PruneFileSourcePartitions` rule matches for.
## How was this patch tested?
Ran existing tests and added new test for `listPartitionsByFilter` in `ExternalCatalogSuite`, which is subclassed by both `InMemoryCatalogSuite` and `HiveExternalCatalogSuite`.
Author: Adrian Ionescu <adrian@databricks.com>
Closes#17510 from adrian-ionescu/InMemoryCatalog.
## What changes were proposed in this pull request?
Currently, when we infer the types for vaild JSON strings but object or array, we are producing empty schemas regardless of parse modes as below:
```scala
scala> spark.read.option("mode", "DROPMALFORMED").json(Seq("""{"a": 1}""", """"a"""").toDS).printSchema()
root
```
```scala
scala> spark.read.option("mode", "FAILFAST").json(Seq("""{"a": 1}""", """"a"""").toDS).printSchema()
root
```
This PR proposes to handle parse modes in type inference.
After this PR,
```scala
scala> spark.read.option("mode", "DROPMALFORMED").json(Seq("""{"a": 1}""", """"a"""").toDS).printSchema()
root
|-- a: long (nullable = true)
```
```
scala> spark.read.option("mode", "FAILFAST").json(Seq("""{"a": 1}""", """"a"""").toDS).printSchema()
java.lang.RuntimeException: Failed to infer a common schema. Struct types are expected but string was found.
```
This PR is based on e233fd0334 and I and NathanHowell talked about this in https://issues.apache.org/jira/browse/SPARK-19641
## How was this patch tested?
Unit tests in `JsonSuite` for both `DROPMALFORMED` and `FAILFAST` modes.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17492 from HyukjinKwon/SPARK-19641.
## What changes were proposed in this pull request?
This PR proposes to use `XXX` format instead of `ZZ`. `ZZ` seems a `FastDateFormat` specific.
`ZZ` supports "ISO 8601 extended format time zones" but it seems `FastDateFormat` specific option.
I misunderstood this is compatible format with `SimpleDateFormat` when this change is introduced.
Please see [SimpleDateFormat documentation]( https://docs.oracle.com/javase/7/docs/api/java/text/SimpleDateFormat.html#iso8601timezone) and [FastDateFormat documentation](https://commons.apache.org/proper/commons-lang/apidocs/org/apache/commons/lang3/time/FastDateFormat.html).
It seems we better replace `ZZ` to `XXX` because they look using the same strategy - [FastDateParser.java#L930](8767cd4f1a/src/main/java/org/apache/commons/lang3/time/FastDateParser.java (L930)), [FastDateParser.java#L932-L951 ](8767cd4f1a/src/main/java/org/apache/commons/lang3/time/FastDateParser.java (L932-L951)) and [FastDateParser.java#L596-L601](8767cd4f1a/src/main/java/org/apache/commons/lang3/time/FastDateParser.java (L596-L601)).
I also checked the codes and manually debugged it for sure. It seems both cases use the same pattern `( Z|(?:[+-]\\d{2}(?::)\\d{2}))`.
_Note that this should be rather a fix about documentation and not the behaviour change because `ZZ` seems invalid date format in `SimpleDateFormat` as documented in `DataFrameReader` and etc, and both `ZZ` and `XXX` look identically working with `FastDateFormat`_
Current documentation is as below:
```
* <li>`timestampFormat` (default `yyyy-MM-dd'T'HH:mm:ss.SSSZZ`): sets the string that
* indicates a timestamp format. Custom date formats follow the formats at
* `java.text.SimpleDateFormat`. This applies to timestamp type.</li>
```
## How was this patch tested?
Existing tests should cover this. Also, manually tested as below (BTW, I don't think these are worth being added as tests within Spark):
**Parse**
```scala
scala> new java.text.SimpleDateFormat("yyyy-MM-dd'T'HH:mm:ss.SSSXXX").parse("2017-03-21T00:00:00.000-11:00")
res4: java.util.Date = Tue Mar 21 20:00:00 KST 2017
scala> new java.text.SimpleDateFormat("yyyy-MM-dd'T'HH:mm:ss.SSSXXX").parse("2017-03-21T00:00:00.000Z")
res10: java.util.Date = Tue Mar 21 09:00:00 KST 2017
scala> new java.text.SimpleDateFormat("yyyy-MM-dd'T'HH:mm:ss.SSSZZ").parse("2017-03-21T00:00:00.000-11:00")
java.text.ParseException: Unparseable date: "2017-03-21T00:00:00.000-11:00"
at java.text.DateFormat.parse(DateFormat.java:366)
... 48 elided
scala> new java.text.SimpleDateFormat("yyyy-MM-dd'T'HH:mm:ss.SSSZZ").parse("2017-03-21T00:00:00.000Z")
java.text.ParseException: Unparseable date: "2017-03-21T00:00:00.000Z"
at java.text.DateFormat.parse(DateFormat.java:366)
... 48 elided
```
```scala
scala> org.apache.commons.lang3.time.FastDateFormat.getInstance("yyyy-MM-dd'T'HH:mm:ss.SSSXXX").parse("2017-03-21T00:00:00.000-11:00")
res7: java.util.Date = Tue Mar 21 20:00:00 KST 2017
scala> org.apache.commons.lang3.time.FastDateFormat.getInstance("yyyy-MM-dd'T'HH:mm:ss.SSSXXX").parse("2017-03-21T00:00:00.000Z")
res1: java.util.Date = Tue Mar 21 09:00:00 KST 2017
scala> org.apache.commons.lang3.time.FastDateFormat.getInstance("yyyy-MM-dd'T'HH:mm:ss.SSSZZ").parse("2017-03-21T00:00:00.000-11:00")
res8: java.util.Date = Tue Mar 21 20:00:00 KST 2017
scala> org.apache.commons.lang3.time.FastDateFormat.getInstance("yyyy-MM-dd'T'HH:mm:ss.SSSZZ").parse("2017-03-21T00:00:00.000Z")
res2: java.util.Date = Tue Mar 21 09:00:00 KST 2017
```
**Format**
```scala
scala> new java.text.SimpleDateFormat("yyyy-MM-dd'T'HH:mm:ss.SSSXXX").format(new java.text.SimpleDateFormat("yyyy-MM-dd'T'HH:mm:ss.SSSXXX").parse("2017-03-21T00:00:00.000-11:00"))
res6: String = 2017-03-21T20:00:00.000+09:00
```
```scala
scala> val fd = org.apache.commons.lang3.time.FastDateFormat.getInstance("yyyy-MM-dd'T'HH:mm:ss.SSSZZ")
fd: org.apache.commons.lang3.time.FastDateFormat = FastDateFormat[yyyy-MM-dd'T'HH:mm:ss.SSSZZ,ko_KR,Asia/Seoul]
scala> fd.format(fd.parse("2017-03-21T00:00:00.000-11:00"))
res1: String = 2017-03-21T20:00:00.000+09:00
scala> val fd = org.apache.commons.lang3.time.FastDateFormat.getInstance("yyyy-MM-dd'T'HH:mm:ss.SSSXXX")
fd: org.apache.commons.lang3.time.FastDateFormat = FastDateFormat[yyyy-MM-dd'T'HH:mm:ss.SSSXXX,ko_KR,Asia/Seoul]
scala> fd.format(fd.parse("2017-03-21T00:00:00.000-11:00"))
res2: String = 2017-03-21T20:00:00.000+09:00
```
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17489 from HyukjinKwon/SPARK-20166.
## What changes were proposed in this pull request?
If the shutdown hook called before the variable `uiTab` is set , it will throw a NullPointerException.
## How was this patch tested?
manual tests
Author: zuotingbing <zuo.tingbing9@zte.com.cn>
Closes#17496 from zuotingbing/SPARK-HiveThriftServer2.
## What changes were proposed in this pull request?
Currently, `DataType.fromJson` throws `scala.MatchError` or `java.util.NoSuchElementException` in some cases when the JSON input is invalid as below:
```scala
DataType.fromJson(""""abcd"""")
```
```
java.util.NoSuchElementException: key not found: abcd
at ...
```
```scala
DataType.fromJson("""{"abcd":"a"}""")
```
```
scala.MatchError: JObject(List((abcd,JString(a)))) (of class org.json4s.JsonAST$JObject)
at ...
```
```scala
DataType.fromJson("""{"fields": [{"a":123}], "type": "struct"}""")
```
```
scala.MatchError: JObject(List((a,JInt(123)))) (of class org.json4s.JsonAST$JObject)
at ...
```
After this PR,
```scala
DataType.fromJson(""""abcd"""")
```
```
java.lang.IllegalArgumentException: Failed to convert the JSON string 'abcd' to a data type.
at ...
```
```scala
DataType.fromJson("""{"abcd":"a"}""")
```
```
java.lang.IllegalArgumentException: Failed to convert the JSON string '{"abcd":"a"}' to a data type.
at ...
```
```scala
DataType.fromJson("""{"fields": [{"a":123}], "type": "struct"}""")
at ...
```
```
java.lang.IllegalArgumentException: Failed to convert the JSON string '{"a":123}' to a field.
```
## How was this patch tested?
Unit test added in `DataTypeSuite`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17468 from HyukjinKwon/fromjson_exception.
## What changes were proposed in this pull request?
`BroadcastHint` should use child's statistics and set `isBroadcastable` to true.
## How was this patch tested?
Added a new stats estimation test for `BroadcastHint`.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17504 from wzhfy/broadcastHintEstimation.
### What changes were proposed in this pull request?
After we renames `Catalog`.`createExternalTable` to `createTable` in the PR: https://github.com/apache/spark/pull/16528, we also need to deprecate the corresponding functions in `SQLContext`.
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17502 from gatorsmile/deprecateCreateExternalTable.
## What changes were proposed in this pull request?
- Encoder's deserializer must be resolved at the driver where the class is defined. Otherwise there are corner cases using nested classes where resolving at the executor can fail.
- Fixed flaky test related to processing time timeout. The flakiness is caused because the test thread (that adds data to memory source) has a race condition with the streaming query thread. When testing the manual clock, the goal is to add data and increment clock together atomically, such that a trigger sees new data AND updated clock simultaneously (both or none). This fix adds additional synchronization in when adding data; it makes sure that the streaming query thread is waiting on the manual clock to be incremented (so no batch is currently running) before adding data.
- Added`testQuietly` on some tests that generate a lot of error logs.
## How was this patch tested?
Multiple runs on existing unit tests
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#17488 from tdas/SPARK-20165.
### What changes were proposed in this pull request?
`ParquetConversions` and `OrcConversions` should be treated as regular `Analyzer` rules. It is not reasonable to be part of `HiveSessionCatalog`. This PR also combines two rules `ParquetConversions` and `OrcConversions` to build a new rule `RelationConversions `.
After moving these two rules out of HiveSessionCatalog, the next step is to clean up, rename and move `HiveMetastoreCatalog` because it is not related to the hive package any more.
### How was this patch tested?
The existing test cases
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17484 from gatorsmile/cleanup.
## What changes were proposed in this pull request?
The query plan in an `AnalysisException` may be `null` when an `AnalysisException` object is serialized and then deserialized, since `plan` is marked `transient`. Or when someone throws an `AnalysisException` with a null query plan (which should not happen).
`def getMessage` is not tolerant of this and throws a `NullPointerException`, leading to loss of information about the original exception.
The fix is to add a `null` check in `getMessage`.
## How was this patch tested?
- Unit test
Author: Kunal Khamar <kkhamar@outlook.com>
Closes#17486 from kunalkhamar/spark-20164.
## What changes were proposed in this pull request?
After SPARK-20136, we report metadata timing metrics in scan operator. However, that timing metric doesn't include one of the most important part of metadata, which is partition pruning. This patch adds that time measurement to the scan metrics.
## How was this patch tested?
N/A - I tried adding a test in SQLMetricsSuite but it was extremely convoluted to the point that I'm not sure if this is worth it.
Author: Reynold Xin <rxin@databricks.com>
Closes#17476 from rxin/SPARK-20151.
## What changes were proposed in this pull request?
Instead of iterating all expressions that can return null for null inputs, we can just check `NullIntolerant`.
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17450 from cloud-fan/null.
…adoc
## What changes were proposed in this pull request?
Use recommended values for row boundaries in Window's scaladoc, i.e. `Window.unboundedPreceding`, `Window.unboundedFollowing`, and `Window.currentRow` (that were introduced in 2.1.0).
## How was this patch tested?
Local build
Author: Jacek Laskowski <jacek@japila.pl>
Closes#17417 from jaceklaskowski/window-expression-scaladoc.
## What changes were proposed in this pull request?
The internal FileCommitProtocol interface returns all task commit messages in bulk to the implementation when a job finishes. However, it is sometimes useful to access those messages before the job completes, so that the driver gets incremental progress updates before the job finishes.
This adds an `onTaskCommit` listener to the internal api.
## How was this patch tested?
Unit tests.
cc rxin
Author: Eric Liang <ekl@databricks.com>
Closes#17475 from ericl/file-commit-api-ext.
## What changes were proposed in this pull request?
This patch adds explicit metadata operation timing and number of files in data source metrics. Those would be useful to include for performance profiling.
Screenshot of a UI with this change (num files and metadata time are new metrics):
<img width="321" alt="screen shot 2017-03-29 at 12 29 28 am" src="https://cloud.githubusercontent.com/assets/323388/24443272/d4ea58c0-1416-11e7-8940-ecb69375554a.png">
## How was this patch tested?
N/A
Author: Reynold Xin <rxin@databricks.com>
Closes#17465 from rxin/SPARK-20136.
## What changes were proposed in this pull request?
The column comment was missing while constructing the Hive TableSchema. This fix will preserve the original comment.
## How was this patch tested?
I have added a new test case to test the column with/without comment.
Author: bomeng <bmeng@us.ibm.com>
Closes#17470 from bomeng/SPARK-20146.
## What changes were proposed in this pull request?
Commit 6c70a38 broke the build for scala 2.10. The commit uses some reflections which are not available in Scala 2.10. This PR fixes them.
## How was this patch tested?
Existing tests.
Author: Takuya UESHIN <ueshin@databricks.com>
Closes#17473 from ueshin/issues/SPARK-19088.
### What changes were proposed in this pull request?
`FalseLiteral` and `TrueLiteral` should have been eliminated by optimizer rule `BooleanSimplification`, but null literals might be added by optimizer rule `NullPropagation`. For safety, our filter estimation should handle all the eligible literal cases.
Our optimizer rule BooleanSimplification is unable to remove the null literal in many cases. For example, `a < 0 or null`. Thus, we need to handle null literal in filter estimation.
`Not` can be pushed down below `And` and `Or`. Then, we could see two consecutive `Not`, which need to be collapsed into one. Because of the limited expression support for filter estimation, we just need to handle the case `Not(null)` for avoiding incorrect error due to the boolean operation on null. For details, see below matrix.
```
not NULL = NULL
NULL or false = NULL
NULL or true = true
NULL or NULL = NULL
NULL and false = false
NULL and true = NULL
NULL and NULL = NULL
```
### How was this patch tested?
Added the test cases.
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17446 from gatorsmile/constantFilterEstimation.
## What changes were proposed in this pull request?
This pr added `StructType.fromDDL` to convert a DDL format string into `StructType` for defining schemas in `functions.from_json`.
## How was this patch tested?
Added tests in `JsonFunctionsSuite`.
Author: Takeshi Yamamuro <yamamuro@apache.org>
Closes#17406 from maropu/SPARK-20009.
## What changes were proposed in this pull request?
Bugfix from [SPARK-19540.](https://github.com/apache/spark/pull/16826)
Cloning SessionState does not clone query execution listeners, so cloned session is unable to listen to events on queries.
## How was this patch tested?
- Unit test
Author: Kunal Khamar <kkhamar@outlook.com>
Closes#17379 from kunalkhamar/clone-bugfix.
## What changes were proposed in this pull request?
It is not super intuitive how to update SQLMetric on the driver side. This patch introduces a new SQLMetrics.postDriverMetricUpdates function to do that, and adds documentation to make it more obvious.
## How was this patch tested?
Updated a test case to use this method.
Author: Reynold Xin <rxin@databricks.com>
Closes#17464 from rxin/SPARK-20134.
## What changes were proposed in this pull request?
When we build the deserializer expression for map type, we will use `StaticInvoke` to call `ArrayBasedMapData.toScalaMap`, and declare the return type as `scala.collection.immutable.Map`. If the map is inside an Option, we will wrap this `StaticInvoke` with `WrapOption`, which requires the input to be `scala.collect.Map`. Ideally this should be fine, as `scala.collection.immutable.Map` extends `scala.collect.Map`, but our `ObjectType` is too strict about this, this PR fixes it.
## How was this patch tested?
new regression test
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17454 from cloud-fan/map.
## What changes were proposed in this pull request?
Commit ea361165e1 moved most of the logic from the SessionState classes into an accompanying builder. This makes the existence of the `HiveSessionState` redundant. This PR removes the `HiveSessionState`.
## How was this patch tested?
Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#17457 from hvanhovell/SPARK-20126.
## What changes were proposed in this pull request?
Join reorder algorithm should keep exactly the same order of output attributes in the top project.
For example, if user want to select a, b, c, after reordering, we should output a, b, c in the same order as specified by user, instead of b, a, c or other orders.
## How was this patch tested?
A new test case is added in `JoinReorderSuite`.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17453 from wzhfy/keepOrderInProject.
## What changes were proposed in this pull request?
TPCDS q45 fails becuase:
`ReorderJoin` collects all predicates and try to put them into join condition when creating ordered join. If a predicate with an IN subquery (`ListQuery`) is in a join condition instead of a filter condition, `RewritePredicateSubquery.rewriteExistentialExpr` would fail to convert the subquery to an `ExistenceJoin`, and thus result in error.
We should prevent push down of IN subquery to Join operator.
## How was this patch tested?
Add a new test case in `FilterPushdownSuite`.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17428 from wzhfy/noSubqueryInJoinCond.
### What changes were proposed in this pull request?
Changed the pattern to match the first n characters in the location field so that the string truncation does not affect it.
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17448 from gatorsmile/fixTestCAse.
## What changes were proposed in this pull request?
The current SessionState initialization code path is quite complex. A part of the creation is done in the SessionState companion objects, a part of the creation is one inside the SessionState class, and a part is done by passing functions.
This PR refactors this code path, and consolidates SessionState initialization into a builder class. This SessionState will not do any initialization and just becomes a place holder for the various Spark SQL internals. This also lays the ground work for two future improvements:
1. This provides us with a start for removing the `HiveSessionState`. Removing the `HiveSessionState` would also require us to move resource loading into a separate class, and to (re)move metadata hive.
2. This makes it easier to customize the Spark Session. Currently you will need to create a custom version of the builder. I have added hooks to facilitate this. A future step will be to create a semi stable API on top of this.
## How was this patch tested?
Existing tests.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#17433 from hvanhovell/SPARK-20100.
## What changes were proposed in this pull request?
Existing logic seemingly writes null to the BatchCommitLog, even though it does additional checks to write '{}' (valid json) to the log. This PR simplifies the logic by disallowing use of `log.add(batchId, metadata)` and instead using `log.add(batchId)`. No question of specifying metadata, so no confusion related to null.
## How was this patch tested?
Existing tests pass.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#17444 from tdas/SPARK-19876-1.
## What changes were proposed in this pull request?
In current stage, we don't have advanced statistics such as sketches or histograms. As a result, some operator can't estimate `nullCount` accurately. E.g. left outer join estimation does not accurately update `nullCount` currently. So for `IsNull` and `IsNotNull` predicates, we only estimate them when the child is a leaf node, whose `nullCount` is accurate.
## How was this patch tested?
A new test case is added in `FilterEstimationSuite`.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17438 from wzhfy/nullEstimation.
## What changes were proposed in this pull request?
The `CollapseWindow` is currently to aggressive when collapsing adjacent windows. It also collapses windows in the which the parent produces a column that is consumed by the child; this creates an invalid window which will fail at runtime.
This PR fixes this by adding a check for dependent adjacent windows to the `CollapseWindow` rule.
## How was this patch tested?
Added a new test case to `CollapseWindowSuite`
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#17432 from hvanhovell/SPARK-20086.
## What changes were proposed in this pull request?
The `FailureSafeParser` is only used in sql core, it doesn't make sense to put it in catalyst module.
## How was this patch tested?
N/A
Author: Wenchen Fan <wenchen@databricks.com>
Closes#17408 from cloud-fan/minor.
### What changes were proposed in this pull request?
Multiple tests failed. Revert the changes on `supportCodegen` of `GenerateExec`. For example,
- https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/75194/testReport/
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17425 from gatorsmile/turnOnCodeGenGenerateExec.
## What changes were proposed in this pull request?
Updated the description for the `format_number` description to indicate that it uses `HALF_EVEN` rounding. Updated the description for the `round` description to indicate that it uses `HALF_UP` rounding.
## How was this patch tested?
Just changing the two function comments so no testing involved.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Roxanne Moslehi <rmoslehi@palantir.com>
Author: roxannemoslehi <rmoslehi@berkeley.edu>
Closes#17399 from roxannemoslehi/patch-1.
## What changes were proposed in this pull request?
Constraint propagation can be computation expensive and block the driver execution for long time. For example, the below benchmark needs 30mins.
Compared with previous PRs #16998, #16785, this is a much simpler option: add a flag to disable constraint propagation.
### Benchmark
Run the following codes locally.
import org.apache.spark.ml.{Pipeline, PipelineStage}
import org.apache.spark.ml.feature.{OneHotEncoder, StringIndexer, VectorAssembler}
import org.apache.spark.sql.internal.SQLConf
spark.conf.set(SQLConf.CONSTRAINT_PROPAGATION_ENABLED.key, false)
val df = (1 to 40).foldLeft(Seq((1, "foo"), (2, "bar"), (3, "baz")).toDF("id", "x0"))((df, i) => df.withColumn(s"x$i", $"x0"))
val indexers = df.columns.tail.map(c => new StringIndexer()
.setInputCol(c)
.setOutputCol(s"${c}_indexed")
.setHandleInvalid("skip"))
val encoders = indexers.map(indexer => new OneHotEncoder()
.setInputCol(indexer.getOutputCol)
.setOutputCol(s"${indexer.getOutputCol}_encoded")
.setDropLast(true))
val stages: Array[PipelineStage] = indexers ++ encoders
val pipeline = new Pipeline().setStages(stages)
val startTime = System.nanoTime
pipeline.fit(df).transform(df).show
val runningTime = System.nanoTime - startTime
Before this patch: 1786001 ms ~= 30 mins
After this patch: 26392 ms = less than half of a minute
Related PRs: #16998, #16785.
## How was this patch tested?
Jenkins tests.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Liang-Chi Hsieh <viirya@gmail.com>
Closes#17186 from viirya/add-flag-disable-constraint-propagation.
## What changes were proposed in this pull request?
The explain output of `DataSourceScanExec` can contain sensitive information (like Amazon keys). Such information should not end up in logs, or be exposed to non privileged users.
This PR addresses this by adding a redaction facility for the `DataSourceScanExec.treeString`. A user can enable this by setting a regex in the `spark.redaction.string.regex` configuration.
## How was this patch tested?
Added a unit test to check the output of DataSourceScanExec.
Author: Herman van Hovell <hvanhovell@databricks.com>
Closes#17397 from hvanhovell/SPARK-20070.
## What changes were proposed in this pull request?
Fix for typo in Analyzer
## How was this patch tested?
local build
Author: Jacek Laskowski <jacek@japila.pl>
Closes#17409 from jaceklaskowski/analyzer-typo.
### What changes were proposed in this pull request?
This is a follow-up for the PR: https://github.com/apache/spark/pull/17311
- For safety, use `sessionState` to get the user name, instead of calling `SessionState.get()` in the function `toHiveTable`.
- Passing `user names` instead of `conf` when calling `toHiveTable`.
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17405 from gatorsmile/user.
This commit adds a killTaskAttempt method to SparkContext, to allow users to
kill tasks so that they can be re-scheduled elsewhere.
This also refactors the task kill path to allow specifying a reason for the task kill. The reason is propagated opaquely through events, and will show up in the UI automatically as `(N killed: $reason)` and `TaskKilled: $reason`. Without this change, there is no way to provide the user feedback through the UI.
Currently used reasons are "stage cancelled", "another attempt succeeded", and "killed via SparkContext.killTask". The user can also specify a custom reason through `SparkContext.killTask`.
cc rxin
In the stage overview UI the reasons are summarized:
![1](https://cloud.githubusercontent.com/assets/14922/23929209/a83b2862-08e1-11e7-8b3e-ae1967bbe2e5.png)
Within the stage UI you can see individual task kill reasons:
![2](https://cloud.githubusercontent.com/assets/14922/23929200/9a798692-08e1-11e7-8697-72b27ad8a287.png)
Existing tests, tried killing some stages in the UI and verified the messages are as expected.
Author: Eric Liang <ekl@databricks.com>
Author: Eric Liang <ekl@google.com>
Closes#17166 from ericl/kill-reason.
## What changes were proposed in this pull request?
Fixes break caused by: 746a558de2
## How was this patch tested?
Compiled with `build/sbt -Dscala2.10 sql/compile` locally
Author: Burak Yavuz <brkyvz@gmail.com>
Closes#17403 from brkyvz/onceTrigger2.10.
## What changes were proposed in this pull request?
Currently JDBC data source creates tables in the target database using the default type mapping, and the JDBC dialect mechanism. If users want to specify different database data type for only some of columns, there is no option available. In scenarios where default mapping does not work, users are forced to create tables on the target database before writing. This workaround is probably not acceptable from a usability point of view. This PR is to provide a user-defined type mapping for specific columns.
The solution is to allow users to specify database column data type for the create table as JDBC datasource option(createTableColumnTypes) on write. Data type information can be specified in the same format as table schema DDL format (e.g: `name CHAR(64), comments VARCHAR(1024)`).
All supported target database types can not be specified , the data types has to be valid spark sql data types also. For example user can not specify target database CLOB data type. This will be supported in the follow-up PR.
Example:
```Scala
df.write
.option("createTableColumnTypes", "name CHAR(64), comments VARCHAR(1024)")
.jdbc(url, "TEST.DBCOLTYPETEST", properties)
```
## How was this patch tested?
Added new test cases to the JDBCWriteSuite
Author: sureshthalamati <suresh.thalamati@gmail.com>
Closes#16209 from sureshthalamati/jdbc_custom_dbtype_option_json-spark-10849.
## What changes were proposed in this pull request?
An additional trigger and trigger executor that will execute a single trigger only. One can use this OneTime trigger to have more control over the scheduling of triggers.
In addition, this patch requires an optimization to StreamExecution that logs a commit record at the end of successfully processing a batch. This new commit log will be used to determine the next batch (offsets) to process after a restart, instead of using the offset log itself to determine what batch to process next after restart; using the offset log to determine this would process the previously logged batch, always, thus not permitting a OneTime trigger feature.
## How was this patch tested?
A number of existing tests have been revised. These tests all assumed that when restarting a stream, the last batch in the offset log is to be re-processed. Given that we now have a commit log that will tell us if that last batch was processed successfully, the results/assumptions of those tests needed to be revised accordingly.
In addition, a OneTime trigger test was added to StreamingQuerySuite, which tests:
- The semantics of OneTime trigger (i.e., on start, execute a single batch, then stop).
- The case when the commit log was not able to successfully log the completion of a batch before restart, which would mean that we should fall back to what's in the offset log.
- A OneTime trigger execution that results in an exception being thrown.
marmbrus tdas zsxwing
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Tyson Condie <tcondie@gmail.com>
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#17219 from tcondie/stream-commit.
## What changes were proposed in this pull request?
Several javadoc8 breaks have been introduced. This PR proposes fix those instances so that we can build Scala/Java API docs.
```
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/GroupState.java:6: error: reference not found
[error] * <code>flatMapGroupsWithState</code> operations on {link KeyValueGroupedDataset}.
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/GroupState.java:10: error: reference not found
[error] * Both, <code>mapGroupsWithState</code> and <code>flatMapGroupsWithState</code> in {link KeyValueGroupedDataset}
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/GroupState.java:51: error: reference not found
[error] * {link GroupStateTimeout.ProcessingTimeTimeout}) or event time (i.e.
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/GroupState.java:52: error: reference not found
[error] * {link GroupStateTimeout.EventTimeTimeout}).
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/streaming/GroupState.java:158: error: reference not found
[error] * Spark SQL types (see {link Encoder} for more details).
[error] ^
[error] .../spark/mllib/target/java/org/apache/spark/ml/fpm/FPGrowthParams.java:26: error: bad use of '>'
[error] * Number of partitions (>=1) used by parallel FP-growth. By default the param is not set, and
[error] ^
[error] .../spark/sql/core/src/main/java/org/apache/spark/api/java/function/FlatMapGroupsWithStateFunction.java:30: error: reference not found
[error] * {link org.apache.spark.sql.KeyValueGroupedDataset#flatMapGroupsWithState(
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyValueGroupedDataset.java:211: error: reference not found
[error] * See {link GroupState} for more details.
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyValueGroupedDataset.java:232: error: reference not found
[error] * See {link GroupState} for more details.
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyValueGroupedDataset.java:254: error: reference not found
[error] * See {link GroupState} for more details.
[error] ^
[error] .../spark/sql/core/target/java/org/apache/spark/sql/KeyValueGroupedDataset.java:277: error: reference not found
[error] * See {link GroupState} for more details.
[error] ^
[error] .../spark/core/target/java/org/apache/spark/TaskContextImpl.java:10: error: reference not found
[error] * {link TaskMetrics} & {link MetricsSystem} objects are not thread safe.
[error] ^
[error] .../spark/core/target/java/org/apache/spark/TaskContextImpl.java:10: error: reference not found
[error] * {link TaskMetrics} & {link MetricsSystem} objects are not thread safe.
[error] ^
[info] 13 errors
```
```
jekyll 3.3.1 | Error: Unidoc generation failed
```
## How was this patch tested?
Manually via `jekyll build`
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17389 from HyukjinKwon/minor-javadoc8-fix.
## What changes were proposed in this pull request?
This PR proposes to support _not_ trimming the white spaces when writing out. These are `false` by default in CSV reading path but these are `true` by default in CSV writing in univocity parser.
Both `ignoreLeadingWhiteSpace` and `ignoreTrailingWhiteSpace` options are not being used for writing and therefore, we are always trimming the white spaces.
It seems we should provide a way to keep this white spaces easily.
WIth the data below:
```scala
val df = spark.read.csv(Seq("a , b , c").toDS)
df.show()
```
```
+---+----+---+
|_c0| _c1|_c2|
+---+----+---+
| a | b | c|
+---+----+---+
```
**Before**
```scala
df.write.csv("/tmp/text.csv")
spark.read.text("/tmp/text.csv").show()
```
```
+-----+
|value|
+-----+
|a,b,c|
+-----+
```
It seems this can't be worked around via `quoteAll` too.
```scala
df.write.option("quoteAll", true).csv("/tmp/text.csv")
spark.read.text("/tmp/text.csv").show()
```
```
+-----------+
| value|
+-----------+
|"a","b","c"|
+-----------+
```
**After**
```scala
df.write.option("ignoreLeadingWhiteSpace", false).option("ignoreTrailingWhiteSpace", false).csv("/tmp/text.csv")
spark.read.text("/tmp/text.csv").show()
```
```
+----------+
| value|
+----------+
|a , b , c|
+----------+
```
Note that this case is possible in R
```r
> system("cat text.csv")
f1,f2,f3
a , b , c
> df <- read.csv(file="text.csv")
> df
f1 f2 f3
1 a b c
> write.csv(df, file="text1.csv", quote=F, row.names=F)
> system("cat text1.csv")
f1,f2,f3
a , b , c
```
## How was this patch tested?
Unit tests in `CSVSuite` and manual tests for Python.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17310 from HyukjinKwon/SPARK-18579.
## What changes were proposed in this pull request?
Since the state is tied a "group" in the "mapGroupsWithState" operations, its better to call the state "GroupState" instead of a key. This would make it more general if you extends this operation to RelationGroupedDataset and python APIs.
## How was this patch tested?
Existing unit tests.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#17385 from tdas/SPARK-20057.
## What changes were proposed in this pull request?
Currently, when we perform count with timestamp types, it prints the internal representation as the column name as below:
```scala
Seq(new java.sql.Timestamp(1)).toDF("a").groupBy("a").pivot("a").count().show()
```
```
+--------------------+----+
| a|1000|
+--------------------+----+
|1969-12-31 16:00:...| 1|
+--------------------+----+
```
This PR proposes to use external Scala value instead of the internal representation in the column names as below:
```
+--------------------+-----------------------+
| a|1969-12-31 16:00:00.001|
+--------------------+-----------------------+
|1969-12-31 16:00:...| 1|
+--------------------+-----------------------+
```
## How was this patch tested?
Unit test in `DataFramePivotSuite` and manual tests.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17348 from HyukjinKwon/SPARK-20018.
## What changes were proposed in this pull request?
This PR proposes to make `mode` options in both CSV and JSON to use `cass object` and fix some related comments related previous fix.
Also, this PR modifies some tests related parse modes.
## How was this patch tested?
Modified unit tests in both `CSVSuite.scala` and `JsonSuite.scala`.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17377 from HyukjinKwon/SPARK-19949.
## What changes were proposed in this pull request?
During build/sbt publish-local, build breaks due to javadocs errors. This patch fixes those errors.
## How was this patch tested?
Tested by running the sbt build.
Author: Prashant Sharma <prashsh1@in.ibm.com>
Closes#17358 from ScrapCodes/docs-fix.
### What changes were proposed in this pull request?
Currently, `DESC FORMATTED` did not output the table comment, unlike what `DESC EXTENDED` does. This PR is to fix it.
Also correct the following displayed names in `DESC FORMATTED`, for being consistent with `DESC EXTENDED`
- `"Create Time:"` -> `"Created:"`
- `"Last Access Time:"` -> `"Last Access:"`
### How was this patch tested?
Added test cases in `describe.sql`
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17381 from gatorsmile/descFormattedTableComment.
## What changes were proposed in this pull request?
Adding event time based timeout. The user sets the timeout timestamp directly using `KeyedState.setTimeoutTimestamp`. The keys times out when the watermark crosses the timeout timestamp.
## How was this patch tested?
Unit tests
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#17361 from tdas/SPARK-20030.
## What changes were proposed in this pull request?
There is a race condition between calling stop on a streaming query and deleting directories in `withTempDir` that causes test to fail, fixing to do lazy deletion using delete on shutdown JVM hook.
## How was this patch tested?
- Unit test
- repeated 300 runs with no failure
Author: Kunal Khamar <kkhamar@outlook.com>
Closes#17382 from kunalkhamar/partition-bugfix.
## What changes were proposed in this pull request?
This PR proposes to defer throwing the exception within `DataSource`.
Currently, if other datasources fail to infer the schema, it returns `None` and then this is being validated in `DataSource` as below:
```
scala> spark.read.json("emptydir")
org.apache.spark.sql.AnalysisException: Unable to infer schema for JSON. It must be specified manually.;
```
```
scala> spark.read.orc("emptydir")
org.apache.spark.sql.AnalysisException: Unable to infer schema for ORC. It must be specified manually.;
```
```
scala> spark.read.parquet("emptydir")
org.apache.spark.sql.AnalysisException: Unable to infer schema for Parquet. It must be specified manually.;
```
However, CSV it checks it within the datasource implementation and throws another exception message as below:
```
scala> spark.read.csv("emptydir")
java.lang.IllegalArgumentException: requirement failed: Cannot infer schema from an empty set of files
```
We could remove this duplicated check and validate this in one place in the same way with the same message.
## How was this patch tested?
Unit test in `CSVSuite` and manual test.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17256 from HyukjinKwon/SPARK-19919.
## What changes were proposed in this pull request?
The description in the comment for array_contains is vague/incomplete (i.e., doesn't mention that it returns `null` if the array is `null`); this PR fixes that.
## How was this patch tested?
No testing, since it merely changes a comment.
Please review http://spark.apache.org/contributing.html before opening a pull request.
Author: Will Manning <lwwmanning@gmail.com>
Closes#17380 from lwwmanning/patch-1.
## What changes were proposed in this pull request?
Change the nullability of function `StringToMap` from `false` to `true`.
Author: zhaorongsheng <334362872@qq.com>
Closes#17350 from zhaorongsheng/bug-fix_strToMap_NPE.
## What changes were proposed in this pull request?
Support` ALTER TABLE ADD COLUMNS (...) `syntax for Hive serde and some datasource tables.
In this PR, we consider a few aspects:
1. View is not supported for `ALTER ADD COLUMNS`
2. Since tables created in SparkSQL with Hive DDL syntax will populate table properties with schema information, we need make sure the consistency of the schema before and after ALTER operation in order for future use.
3. For embedded-schema type of format, such as `parquet`, we need to make sure that the predicate on the newly-added columns can be evaluated properly, or pushed down properly. In case of the data file does not have the columns for the newly-added columns, such predicates should return as if the column values are NULLs.
4. For datasource table, this feature does not support the following:
4.1 TEXT format, since there is only one default column `value` is inferred for text format data.
4.2 ORC format, since SparkSQL native ORC reader does not support the difference between user-specified-schema and inferred schema from ORC files.
4.3 Third party datasource types that implements RelationProvider, including the built-in JDBC format, since different implementations by the vendors may have different ways to dealing with schema.
4.4 Other datasource types, such as `parquet`, `json`, `csv`, `hive` are supported.
5. Column names being added can not be duplicate of any existing data column or partition column names. Case sensitivity is taken into consideration according to the sql configuration.
6. This feature also supports In-Memory catalog, while Hive support is turned off.
## How was this patch tested?
Add new test cases
Author: Xin Wu <xinwu@us.ibm.com>
Closes#16626 from xwu0226/alter_add_columns.
## What changes were proposed in this pull request?
1. Improve documentation for class `Cost` and `JoinReorderDP` and method `buildJoin()`.
2. Change code structure of `buildJoin()` to make the logic clearer.
3. Add a debug-level log to record information for join reordering, including time cost, the number of items and the number of plans in memo.
## How was this patch tested?
Not related.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17353 from wzhfy/reorderFollow.
### What changes were proposed in this pull request?
SessionCatalog API setCurrentDatabase does not set the current database of the underlying ExternalCatalog. Thus, weird errors could come in the test suites after we call reset. We need to fix it.
So far, have not found the direct impact in the other code paths because we expect all the SessionCatalog APIs should always use the current database value we managed, unless some of code paths skip it. Thus, we fix it in the test-only function reset().
### How was this patch tested?
Multiple test case failures are observed in mvn and add a test case in SessionCatalogSuite.
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17354 from gatorsmile/useDB.
## What changes were proposed in this pull request?
Currently JSON and CSV have exactly the same logic about handling bad records, this PR tries to abstract it and put it in a upper level to reduce code duplication.
The overall idea is, we make the JSON and CSV parser to throw a BadRecordException, then the upper level, FailureSafeParser, handles bad records according to the parse mode.
Behavior changes:
1. with PERMISSIVE mode, if the number of tokens doesn't match the schema, previously CSV parser will treat it as a legal record and parse as many tokens as possible. After this PR, we treat it as an illegal record, and put the raw record string in a special column, but we still parse as many tokens as possible.
2. all logging is removed as they are not very useful in practice.
## How was this patch tested?
existing tests
Author: Wenchen Fan <wenchen@databricks.com>
Author: hyukjinkwon <gurwls223@gmail.com>
Author: Wenchen Fan <cloud0fan@gmail.com>
Closes#17315 from cloud-fan/bad-record2.
## What changes were proposed in this pull request?
Since current `HiveShim`'s `convertFilters` does not escape the string literals. There exists the following correctness issues. This PR aims to return the correct result and also shows the more clear exception message.
**BEFORE**
```scala
scala> Seq((1, "p1", "q1"), (2, "p1\" and q=\"q1", "q2")).toDF("a", "p", "q").write.partitionBy("p", "q").saveAsTable("t1")
scala> spark.table("t1").filter($"p" === "p1\" and q=\"q1").select($"a").show
+---+
| a|
+---+
+---+
scala> spark.table("t1").filter($"p" === "'\"").select($"a").show
java.lang.RuntimeException: Caught Hive MetaException attempting to get partition metadata by filter from ...
```
**AFTER**
```scala
scala> spark.table("t1").filter($"p" === "p1\" and q=\"q1").select($"a").show
+---+
| a|
+---+
| 2|
+---+
scala> spark.table("t1").filter($"p" === "'\"").select($"a").show
java.lang.UnsupportedOperationException: Partition filter cannot have both `"` and `'` characters
```
## How was this patch tested?
Pass the Jenkins test with new test cases.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#17266 from dongjoon-hyun/SPARK-19912.
## What changes were proposed in this pull request?
A Bean serializer in `ExpressionEncoder` could change values when Beans having NULL. A concrete example is as follows;
```
scala> :paste
class Outer extends Serializable {
private var cls: Inner = _
def setCls(c: Inner): Unit = cls = c
def getCls(): Inner = cls
}
class Inner extends Serializable {
private var str: String = _
def setStr(s: String): Unit = str = str
def getStr(): String = str
}
scala> Seq("""{"cls":null}""", """{"cls": {"str":null}}""").toDF().write.text("data")
scala> val encoder = Encoders.bean(classOf[Outer])
scala> val schema = encoder.schema
scala> val df = spark.read.schema(schema).json("data").as[Outer](encoder)
scala> df.show
+------+
| cls|
+------+
|[null]|
| null|
+------+
scala> df.map(x => x)(encoder).show()
+------+
| cls|
+------+
|[null]|
|[null]| // <-- Value changed
+------+
```
This is because the Bean serializer does not have the NULL-check expressions that the serializer of Scala's product types has. Actually, this value change does not happen in Scala's product types;
```
scala> :paste
case class Outer(cls: Inner)
case class Inner(str: String)
scala> val encoder = Encoders.product[Outer]
scala> val schema = encoder.schema
scala> val df = spark.read.schema(schema).json("data").as[Outer](encoder)
scala> df.show
+------+
| cls|
+------+
|[null]|
| null|
+------+
scala> df.map(x => x)(encoder).show()
+------+
| cls|
+------+
|[null]|
| null|
+------+
```
This pr added the NULL-check expressions in Bean serializer along with the serializer of Scala's product types.
## How was this patch tested?
Added tests in `JavaDatasetSuite`.
Author: Takeshi Yamamuro <yamamuro@apache.org>
Closes#17347 from maropu/SPARK-19980.
## What changes were proposed in this pull request?
After sort merge join for inner join, now we only keep left key ordering. However, after inner join, right key has the same value and order as left key. So if we need another smj on right key, we will unnecessarily add a sort which causes additional cost.
As a more complicated example, A join B on A.key = B.key join C on B.key = C.key join D on A.key = D.key. We will unnecessarily add a sort on B.key when join {A, B} and C, and add a sort on A.key when join {A, B, C} and D.
To fix this, we need to propagate all sorted information (equivalent expressions) from bottom up through `outputOrdering` and `SortOrder`.
## How was this patch tested?
Test cases are added.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17339 from wzhfy/sortEnhance.
## What changes were proposed in this pull request?
update `StatFunctions.multipleApproxQuantiles` to handle NaN/null
## How was this patch tested?
existing tests and added tests
Author: Zheng RuiFeng <ruifengz@foxmail.com>
Closes#16971 from zhengruifeng/quantiles_nan.
## What changes were proposed in this pull request?
In the kerberized hadoop cluster, when Spark creates tables, the owner of tables are filled with PRINCIPAL strings instead of USER names. This is inconsistent with Hive and causes problems when using [ROLE](https://cwiki.apache.org/confluence/display/Hive/SQL+Standard+Based+Hive+Authorization) in Hive. We had better to fix this.
**BEFORE**
```scala
scala> sql("create table t(a int)").show
scala> sql("desc formatted t").show(false)
...
|Owner: |sparkEXAMPLE.COM | |
```
**AFTER**
```scala
scala> sql("create table t(a int)").show
scala> sql("desc formatted t").show(false)
...
|Owner: |spark | |
```
## How was this patch tested?
Manually do `create table` and `desc formatted` because this happens in Kerberized clusters.
Author: Dongjoon Hyun <dongjoon@apache.org>
Closes#17311 from dongjoon-hyun/SPARK-19970.
## What changes were proposed in this pull request?
After we have merged the `HiveDDLSuite` and `DDLSuite` in [SPARK-19235](https://issues.apache.org/jira/browse/SPARK-19235), we have two subclasses of `DDLSuite`, that is `HiveCatalogedDDLSuite` and `InMemoryCatalogDDLSuite`.
While `DDLSuite` is in `sql/core module`, and `HiveCatalogedDDLSuite` is in `sql/hive module`, if we mvn test
`HiveCatalogedDDLSuite`, it will run the test in its parent class `DDLSuite`, this will cause some test case failed which will get and use the test file path in `sql/core module` 's `resource`.
Because the test file path getted will start with 'jar:' like "jar:file:/home/jenkins/workspace/spark-master-test-maven-hadoop-2.6/sql/core/target/spark-sql_2.11-2.2.0-SNAPSHOT-tests.jar!/test-data/cars.csv", which will failed when new Path() in datasource.scala
This PR fix this by copy file from resource to a temp dir.
## How was this patch tested?
N/A
Author: windpiger <songjun@outlook.com>
Closes#17338 from windpiger/fixtestfailemvn.
## What changes were proposed in this pull request?
Star schema consists of one or more fact tables referencing a number of dimension tables. In general, queries against star schema are expected to run fast because of the established RI constraints among the tables. This design proposes a join reordering based on natural, generally accepted heuristics for star schema queries:
- Finds the star join with the largest fact table and places it on the driving arm of the left-deep join. This plan avoids large tables on the inner, and thus favors hash joins.
- Applies the most selective dimensions early in the plan to reduce the amount of data flow.
The design document was included in SPARK-17791.
Link to the google doc: [StarSchemaDetection](https://docs.google.com/document/d/1UAfwbm_A6wo7goHlVZfYK99pqDMEZUumi7pubJXETEA/edit?usp=sharing)
## How was this patch tested?
A new test suite StarJoinSuite.scala was implemented.
Author: Ioana Delaney <ioanamdelaney@gmail.com>
Closes#15363 from ioana-delaney/starJoinReord2.
## What changes were proposed in this pull request?
For right outer join, values of the left key will be filled with nulls if it can't match the value of the right key, so `nullOrdering` of the left key can't be guaranteed. We should output right key order instead of left key order.
For full outer join, neither left key nor right key guarantees `nullOrdering`. We should not output any ordering.
In tests, besides adding three test cases for left/right/full outer sort merge join, this patch also reorganizes code in `PlannerSuite` by putting together tests for `Sort`, and also extracts common logic in Sort tests into a method.
## How was this patch tested?
Corresponding test cases are added.
Author: wangzhenhua <wangzhenhua@huawei.com>
Author: Zhenhua Wang <wzh_zju@163.com>
Closes#17331 from wzhfy/wrongOrdering.
## What changes were proposed in this pull request?
This PR proposes to support an array of struct type in `to_json` as below:
```scala
import org.apache.spark.sql.functions._
val df = Seq(Tuple1(Tuple1(1) :: Nil)).toDF("a")
df.select(to_json($"a").as("json")).show()
```
```
+----------+
| json|
+----------+
|[{"_1":1}]|
+----------+
```
Currently, it throws an exception as below (a newline manually inserted for readability):
```
org.apache.spark.sql.AnalysisException: cannot resolve 'structtojson(`array`)' due to data type
mismatch: structtojson requires that the expression is a struct expression.;;
```
This allows the roundtrip with `from_json` as below:
```scala
import org.apache.spark.sql.functions._
import org.apache.spark.sql.types._
val schema = ArrayType(StructType(StructField("a", IntegerType) :: Nil))
val df = Seq("""[{"a":1}, {"a":2}]""").toDF("json").select(from_json($"json", schema).as("array"))
df.show()
// Read back.
df.select(to_json($"array").as("json")).show()
```
```
+----------+
| array|
+----------+
|[[1], [2]]|
+----------+
+-----------------+
| json|
+-----------------+
|[{"a":1},{"a":2}]|
+-----------------+
```
Also, this PR proposes to rename from `StructToJson` to `StructsToJson ` and `JsonToStruct` to `JsonToStructs`.
## How was this patch tested?
Unit tests in `JsonFunctionsSuite` and `JsonExpressionsSuite` for Scala, doctest for Python and test in `test_sparkSQL.R` for R.
Author: hyukjinkwon <gurwls223@gmail.com>
Closes#17192 from HyukjinKwon/SPARK-19849.
## What changes were proposed in this pull request?
When a key does not get any new data in `mapGroupsWithState`, the mapping function is never called on it. So we need a timeout feature that calls the function again in such cases, so that the user can decide whether to continue waiting or clean up (remove state, save stuff externally, etc.).
Timeouts can be either based on processing time or event time. This JIRA is for processing time, but defines the high level API design for both. The usage would look like this.
```
def stateFunction(key: K, value: Iterator[V], state: KeyedState[S]): U = {
...
state.setTimeoutDuration(10000)
...
}
dataset // type is Dataset[T]
.groupByKey[K](keyingFunc) // generates KeyValueGroupedDataset[K, T]
.mapGroupsWithState[S, U](
func = stateFunction,
timeout = KeyedStateTimeout.withProcessingTime) // returns Dataset[U]
```
Note the following design aspects.
- The timeout type is provided as a param in mapGroupsWithState as a parameter global to all the keys. This is so that the planner knows this at planning time, and accordingly optimize the execution based on whether to saves extra info in state or not (e.g. timeout durations or timestamps).
- The exact timeout duration is provided inside the function call so that it can be customized on a per key basis.
- When the timeout occurs for a key, the function is called with no values, and KeyedState.isTimingOut() set to true.
- The timeout is reset for key every time the function is called on the key, that is, when the key has new data, or the key has timed out. So the user has to set the timeout duration everytime the function is called, otherwise there will not be any timeout set.
Guarantees provided on timeout of key, when timeout duration is D ms:
- Timeout will never be called before real clock time has advanced by D ms
- Timeout will be called eventually when there is a trigger with any data in it (i.e. after D ms). So there is a no strict upper bound on when the timeout would occur. For example, if there is no data in the stream (for any key) for a while, then the timeout will not be hit.
Implementation details:
- Added new param to `mapGroupsWithState` for timeout
- Added new method to `StateStore` to filter data based on timeout timestamp
- Changed the internal map type of `HDFSBackedStateStore` from Java's `HashMap` to `ConcurrentHashMap` as the latter allows weakly-consistent fail-safe iterators on the map data. See comments in code for more details.
- Refactored logic of `MapGroupsWithStateExec` to
- Save timeout info to state store for each key that has data.
- Then, filter states that should be timed out based on the current batch processing timestamp.
- Moved KeyedState for `o.a.s.sql` to `o.a.s.sql.streaming`. I remember that this was a feedback in the MapGroupsWithState PR that I had forgotten to address.
## How was this patch tested?
New unit tests in
- MapGroupsWithStateSuite for timeouts.
- StateStoreSuite for new APIs in StateStore.
Author: Tathagata Das <tathagata.das1565@gmail.com>
Closes#17179 from tdas/mapgroupwithstate-timeout.
### What changes were proposed in this pull request?
This PR is to fix the following test failure in maven and the PR https://github.com/apache/spark/pull/15363.
> org.apache.spark.sql.hive.orc.OrcSourceSuite SPARK-19459/SPARK-18220: read char/varchar column written by Hive
The[ test history](https://spark-tests.appspot.com/test-details?suite_name=org.apache.spark.sql.hive.orc.OrcSourceSuite&test_name=SPARK-19459%2FSPARK-18220%3A+read+char%2Fvarchar+column+written+by+Hive) shows all the maven builds failed this test case with the same error message.
```
FAILED: SemanticException [Error 10072]: Database does not exist: db2
org.apache.spark.sql.execution.QueryExecutionException: FAILED: SemanticException [Error 10072]: Database does not exist: db2
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$runHive$1.apply(HiveClientImpl.scala:637)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$runHive$1.apply(HiveClientImpl.scala:621)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$withHiveState$1.apply(HiveClientImpl.scala:288)
at org.apache.spark.sql.hive.client.HiveClientImpl.liftedTree1$1(HiveClientImpl.scala:229)
at org.apache.spark.sql.hive.client.HiveClientImpl.retryLocked(HiveClientImpl.scala:228)
at org.apache.spark.sql.hive.client.HiveClientImpl.withHiveState(HiveClientImpl.scala:271)
at org.apache.spark.sql.hive.client.HiveClientImpl.runHive(HiveClientImpl.scala:621)
at org.apache.spark.sql.hive.client.HiveClientImpl.runSqlHive(HiveClientImpl.scala:611)
at org.apache.spark.sql.hive.orc.OrcSuite$$anonfun$7.apply$mcV$sp(OrcSourceSuite.scala:160)
at org.apache.spark.sql.hive.orc.OrcSuite$$anonfun$7.apply(OrcSourceSuite.scala:155)
at org.apache.spark.sql.hive.orc.OrcSuite$$anonfun$7.apply(OrcSourceSuite.scala:155)
at org.scalatest.Transformer$$anonfun$apply$1.apply$mcV$sp(Transformer.scala:22)
at org.scalatest.OutcomeOf$class.outcomeOf(OutcomeOf.scala:85)
at org.scalatest.OutcomeOf$.outcomeOf(OutcomeOf.scala:104)
at org.scalatest.Transformer.apply(Transformer.scala:22)
at org.scalatest.Transformer.apply(Transformer.scala:20)
at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:166)
at org.apache.spark.SparkFunSuite.withFixture(SparkFunSuite.scala:68)
at org.scalatest.FunSuiteLike$class.invokeWithFixture$1(FunSuiteLike.scala:163)
at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:175)
```
### How was this patch tested?
N/A
Author: Xiao Li <gatorsmile@gmail.com>
Closes#17344 from gatorsmile/testtest.
## What changes were proposed in this pull request?
If case classes have circular references below, it throws StackOverflowError;
```
scala> :pasge
case class classA(i: Int, cls: classB)
case class classB(cls: classA)
scala> Seq(classA(0, null)).toDS()
java.lang.StackOverflowError
at scala.reflect.internal.Symbols$Symbol.info(Symbols.scala:1494)
at scala.reflect.runtime.JavaMirrors$JavaMirror$$anon$1.scala$reflect$runtime$SynchronizedSymbols$SynchronizedSymbol$$super$info(JavaMirrors.scala:66)
at scala.reflect.runtime.SynchronizedSymbols$SynchronizedSymbol$$anonfun$info$1.apply(SynchronizedSymbols.scala:127)
at scala.reflect.runtime.SynchronizedSymbols$SynchronizedSymbol$$anonfun$info$1.apply(SynchronizedSymbols.scala:127)
at scala.reflect.runtime.Gil$class.gilSynchronized(Gil.scala:19)
at scala.reflect.runtime.JavaUniverse.gilSynchronized(JavaUniverse.scala:16)
at scala.reflect.runtime.SynchronizedSymbols$SynchronizedSymbol$class.gilSynchronizedIfNotThreadsafe(SynchronizedSymbols.scala:123)
at scala.reflect.runtime.JavaMirrors$JavaMirror$$anon$1.gilSynchronizedIfNotThreadsafe(JavaMirrors.scala:66)
at scala.reflect.runtime.SynchronizedSymbols$SynchronizedSymbol$class.info(SynchronizedSymbols.scala:127)
at scala.reflect.runtime.JavaMirrors$JavaMirror$$anon$1.info(JavaMirrors.scala:66)
at scala.reflect.internal.Mirrors$RootsBase.getModuleOrClass(Mirrors.scala:48)
at scala.reflect.internal.Mirrors$RootsBase.getModuleOrClass(Mirrors.scala:45)
at scala.reflect.internal.Mirrors$RootsBase.getModuleOrClass(Mirrors.scala:45)
at scala.reflect.internal.Mirrors$RootsBase.getModuleOrClass(Mirrors.scala:45)
at scala.reflect.internal.Mirrors$RootsBase.getModuleOrClass(Mirrors.scala:45)
```
This pr added code to throw UnsupportedOperationException in that case as follows;
```
scala> :paste
case class A(cls: B)
case class B(cls: A)
scala> Seq(A(null)).toDS()
java.lang.UnsupportedOperationException: cannot have circular references in class, but got the circular reference of class B
at org.apache.spark.sql.catalyst.ScalaReflection$.org$apache$spark$sql$catalyst$ScalaReflection$$serializerFor(ScalaReflection.scala:627)
at org.apache.spark.sql.catalyst.ScalaReflection$$anonfun$9.apply(ScalaReflection.scala:644)
at org.apache.spark.sql.catalyst.ScalaReflection$$anonfun$9.apply(ScalaReflection.scala:632)
at scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:241)
at scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:241)
at scala.collection.immutable.List.foreach(List.scala:381)
at scala.collection.TraversableLike$class.flatMap(TraversableLike.scala:241)
```
## How was this patch tested?
Added tests in `DatasetSuite`.
Author: Takeshi Yamamuro <yamamuro@apache.org>
Closes#17318 from maropu/SPARK-19896.
## What changes were proposed in this pull request?
We have some concerns about removing size in the cost model [in the previous pr](https://github.com/apache/spark/pull/17240). It's a tradeoff between code structure and algorithm completeness. I tend to keep the size and thus create this new pr without changing cost model.
What this pr does:
1. We only consider consecutive inner joinable items, thus excluding cartesian products in reordering procedure. This significantly reduces the search space and memory overhead of memo. Otherwise every combination of items will exist in the memo.
2. This pr also includes a bug fix: if a leaf item is a project(_, child), current solution will miss the project.
## How was this patch tested?
Added test cases.
Author: wangzhenhua <wangzhenhua@huawei.com>
Closes#17286 from wzhfy/joinReorder3.
## What changes were proposed in this pull request?
Fix scaladoc for UDFRegistration
## How was this patch tested?
local build
Author: Jacek Laskowski <jacek@japila.pl>
Closes#17337 from jaceklaskowski/udfregistration-scaladoc.
## What changes were proposed in this pull request?
If the user changes the shuffle partition number between batches, Streaming aggregation will fail.
Here are some possible cases:
- Change "spark.sql.shuffle.partitions"
- Use "repartition" and change the partition number in codes
- RangePartitioner doesn't generate deterministic partitions. Right now it's safe as we disallow sort before aggregation. Not sure if we will add some operators using RangePartitioner in future.
## How was this patch tested?
- Unit tests
- Manual tests
- forward compatibility tested by using the new `OffsetSeqMetadata` json with Spark v2.1.0
Author: Kunal Khamar <kkhamar@outlook.com>
Closes#17216 from kunalkhamar/num-partitions.
## What changes were proposed in this pull request?
This pr added entries in `FunctionRegistry` and supported `from_json` in SQL.
## How was this patch tested?
Added tests in `JsonFunctionsSuite` and `SQLQueryTestSuite`.
Author: Takeshi Yamamuro <yamamuro@apache.org>
Closes#17320 from maropu/SPARK-19967.
## What changes were proposed in this pull request?
Allows null values of the pivot column to be included in the pivot values list without throwing NPE
Note this PR was made as an alternative to #17224 but preserves the two phase aggregate operation that is needed for good performance.
## How was this patch tested?
Additional unit test
Author: Andrew Ray <ray.andrew@gmail.com>
Closes#17226 from aray/pivot-null.
## What changes were proposed in this pull request?
This is a tiny teeny refactoring to pass data filters also to the FileIndex, so FileIndex can have a more global view on predicates.
## How was this patch tested?
Change should be covered by existing test cases.
Author: Reynold Xin <rxin@databricks.com>
Closes#17322 from rxin/SPARK-19987.
## Problem
There are several places where we write out version identifiers in various logs for structured streaming (usually `v1`). However, in the places where we check for this, we throw a confusing error message.
## What changes were proposed in this pull request?
This patch made two major changes:
1. added a `parseVersion(...)` method, and based on this method, fixed the following places the way they did version checking (no other place needed to do this checking):
```
HDFSMetadataLog
- CompactibleFileStreamLog ------------> fixed with this patch
- FileStreamSourceLog ---------------> inherited the fix of `CompactibleFileStreamLog`
- FileStreamSinkLog -----------------> inherited the fix of `CompactibleFileStreamLog`
- OffsetSeqLog ------------------------> fixed with this patch
- anonymous subclass in KafkaSource ---> fixed with this patch
```
2. changed the type of `FileStreamSinkLog.VERSION`, `FileStreamSourceLog.VERSION` etc. from `String` to `Int`, so that we can identify newer versions via `version > 1` instead of `version != "v1"`
- note this didn't break any backwards compatibility -- we are still writing out `"v1"` and reading back `"v1"`
## Exception message with this patch
```
java.lang.IllegalStateException: Failed to read log file /private/var/folders/nn/82rmvkk568sd8p3p8tb33trw0000gn/T/spark-86867b65-0069-4ef1-b0eb-d8bd258ff5b8/0. UnsupportedLogVersion: maximum supported log version is v1, but encountered v99. The log file was produced by a newer version of Spark and cannot be read by this version. Please upgrade.
at org.apache.spark.sql.execution.streaming.HDFSMetadataLog.get(HDFSMetadataLog.scala:202)
at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3$$anonfun$apply$mcV$sp$2.apply(OffsetSeqLogSuite.scala:78)
at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3$$anonfun$apply$mcV$sp$2.apply(OffsetSeqLogSuite.scala:75)
at org.apache.spark.sql.test.SQLTestUtils$class.withTempDir(SQLTestUtils.scala:133)
at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite.withTempDir(OffsetSeqLogSuite.scala:26)
at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3.apply$mcV$sp(OffsetSeqLogSuite.scala:75)
at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3.apply(OffsetSeqLogSuite.scala:75)
at org.apache.spark.sql.execution.streaming.OffsetSeqLogSuite$$anonfun$3.apply(OffsetSeqLogSuite.scala:75)
at org.scalatest.Transformer$$anonfun$apply$1.apply$mcV$sp(Transformer.scala:22)
at org.scalatest.OutcomeOf$class.outcomeOf(OutcomeOf.scala:85)
```
## How was this patch tested?
unit tests
Author: Liwei Lin <lwlin7@gmail.com>
Closes#17070 from lw-lin/better-msg.
## What changes were proposed in this pull request?
Currently `SessionCatalogSuite` is only for `InMemoryCatalog`, there is no suite for `HiveExternalCatalog`.
And there are some ddl function is not proper to test in `ExternalCatalogSuite`, because some logic are not full implement in `ExternalCatalog`, these ddl functions are full implement in `SessionCatalog`(e.g. merge the same logic from `ExternalCatalog` up to `SessionCatalog` ).
It is better to test it in `SessionCatalogSuite` for this situation.
So we should add a test suite for `SessionCatalog` with `HiveExternalCatalog`
The main change is that in `SessionCatalogSuite` add two functions:
`withBasicCatalog` and `withEmptyCatalog`
And replace the code like `val catalog = new SessionCatalog(newBasicCatalog)` with above two functions
## How was this patch tested?
add `HiveExternalSessionCatalogSuite`
Author: windpiger <songjun@outlook.com>
Closes#17287 from windpiger/sessioncatalogsuit.