spark-instrumented-optimizer/docs/mllib-isotonic-regression.md
Joseph K. Bradley 5ffd5d3838 [SPARK-14817][ML][MLLIB][DOC] Made DataFrame-based API primary in MLlib guide
## What changes were proposed in this pull request?

Made DataFrame-based API primary
* Spark doc menu bar and other places now link to ml-guide.html, not mllib-guide.html
* mllib-guide.html keeps RDD-specific list of features, with a link at the top redirecting people to ml-guide.html
* ml-guide.html includes a "maintenance mode" announcement about the RDD-based API
  * **Reviewers: please check this carefully**
* (minor) Titles for DF API no longer include "- spark.ml" suffix.  Titles for RDD API have "- RDD-based API" suffix
* Moved migration guide to ml-guide from mllib-guide
  * Also moved past guides from mllib-migration-guides to ml-migration-guides, with a redirect link on mllib-migration-guides
  * **Reviewers**: I did not change any of the content of the migration guides.

Reorganized DataFrame-based guide:
* ml-guide.html mimics the old mllib-guide.html page in terms of content: overview, migration guide, etc.
* Moved Pipeline description into ml-pipeline.html and moved tuning into ml-tuning.html
  * **Reviewers**: I did not change the content of these guides, except some intro text.
* Sidebar remains the same, but with pipeline and tuning sections added

Other:
* ml-classification-regression.html: Moved text about linear methods to new section in page

## How was this patch tested?

Generated docs locally

Author: Joseph K. Bradley <joseph@databricks.com>

Closes #14213 from jkbradley/ml-guide-2.0.
2016-07-15 13:38:23 -07:00

87 lines
4.6 KiB
Markdown

---
layout: global
title: Isotonic regression - RDD-based API
displayTitle: Regression - RDD-based API
---
## Isotonic regression
[Isotonic regression](http://en.wikipedia.org/wiki/Isotonic_regression)
belongs to the family of regression algorithms. Formally isotonic regression is a problem where
given a finite set of real numbers `$Y = {y_1, y_2, ..., y_n}$` representing observed responses
and `$X = {x_1, x_2, ..., x_n}$` the unknown response values to be fitted
finding a function that minimises
`\begin{equation}
f(x) = \sum_{i=1}^n w_i (y_i - x_i)^2
\end{equation}`
with respect to complete order subject to
`$x_1\le x_2\le ...\le x_n$` where `$w_i$` are positive weights.
The resulting function is called isotonic regression and it is unique.
It can be viewed as least squares problem under order restriction.
Essentially isotonic regression is a
[monotonic function](http://en.wikipedia.org/wiki/Monotonic_function)
best fitting the original data points.
`spark.mllib` supports a
[pool adjacent violators algorithm](http://doi.org/10.1198/TECH.2010.10111)
which uses an approach to
[parallelizing isotonic regression](http://doi.org/10.1007/978-3-642-99789-1_10).
The training input is a RDD of tuples of three double values that represent
label, feature and weight in this order. Additionally IsotonicRegression algorithm has one
optional parameter called $isotonic$ defaulting to true.
This argument specifies if the isotonic regression is
isotonic (monotonically increasing) or antitonic (monotonically decreasing).
Training returns an IsotonicRegressionModel that can be used to predict
labels for both known and unknown features. The result of isotonic regression
is treated as piecewise linear function. The rules for prediction therefore are:
* If the prediction input exactly matches a training feature
then associated prediction is returned. In case there are multiple predictions with the same
feature then one of them is returned. Which one is undefined
(same as java.util.Arrays.binarySearch).
* If the prediction input is lower or higher than all training features
then prediction with lowest or highest feature is returned respectively.
In case there are multiple predictions with the same feature
then the lowest or highest is returned respectively.
* If the prediction input falls between two training features then prediction is treated
as piecewise linear function and interpolated value is calculated from the
predictions of the two closest features. In case there are multiple values
with the same feature then the same rules as in previous point are used.
### Examples
<div class="codetabs">
<div data-lang="scala" markdown="1">
Data are read from a file where each line has a format label,feature
i.e. 4710.28,500.00. The data are split to training and testing set.
Model is created using the training set and a mean squared error is calculated from the predicted
labels and real labels in the test set.
Refer to the [`IsotonicRegression` Scala docs](api/scala/index.html#org.apache.spark.mllib.regression.IsotonicRegression) and [`IsotonicRegressionModel` Scala docs](api/scala/index.html#org.apache.spark.mllib.regression.IsotonicRegressionModel) for details on the API.
{% include_example scala/org/apache/spark/examples/mllib/IsotonicRegressionExample.scala %}
</div>
<div data-lang="java" markdown="1">
Data are read from a file where each line has a format label,feature
i.e. 4710.28,500.00. The data are split to training and testing set.
Model is created using the training set and a mean squared error is calculated from the predicted
labels and real labels in the test set.
Refer to the [`IsotonicRegression` Java docs](api/java/org/apache/spark/mllib/regression/IsotonicRegression.html) and [`IsotonicRegressionModel` Java docs](api/java/org/apache/spark/mllib/regression/IsotonicRegressionModel.html) for details on the API.
{% include_example java/org/apache/spark/examples/mllib/JavaIsotonicRegressionExample.java %}
</div>
<div data-lang="python" markdown="1">
Data are read from a file where each line has a format label,feature
i.e. 4710.28,500.00. The data are split to training and testing set.
Model is created using the training set and a mean squared error is calculated from the predicted
labels and real labels in the test set.
Refer to the [`IsotonicRegression` Python docs](api/python/pyspark.mllib.html#pyspark.mllib.regression.IsotonicRegression) and [`IsotonicRegressionModel` Python docs](api/python/pyspark.mllib.html#pyspark.mllib.regression.IsotonicRegressionModel) for more details on the API.
{% include_example python/mllib/isotonic_regression_example.py %}
</div>
</div>